FvH4_2g01890

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000060
Physical Location & Seq
Forward (+)
1617404 .. 1621197
3794 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g01890.t1

Sequence Viewer

Length: 1935 bp
ATGAATAGATACAAGGAGAGCATCCCAGAAGAATCATGGGAGTTGATAAACAGTACTTGTTTTCGGGGAATAATTGAATCATTCAGATTGGGCAAGGTTGAGGAGAATCAAGTGAAGAAGTTTGAATCTGATTTTGAGATCCTAATGAGGTACTACAACAGTGACAATAAAAACTTCATATTTGGGAACAGGGAGATTAAAATTACGAAGCATGATGTTCATTCAATTTTTGGAATAACCGAAGAAGGCTCGGATGTGGATATCACAATAGACCAGAAATGCTGCAAGGGCAGTAAGAAGAATTTGGCAGATTCTGCTGTCTTTGGAAAGCAAACAAGAAGAACAATCACCAGAAAAGTTATTGATGACACATTAATGGAAGAGCTTAGGAAGATTCAGAAGAAGAAAGAGGATCCAAGGAAGATAGACTATTTGGTTATAATGTACCTTATGGCAGCTTTATTTTTCAGCAGAAGCGGGAACCACATTGAATGGAAACTGATACTCAAGTATGAAGACCTTGAAGGCATTGACAAATACAACTGGTCACATAAGGTATTAGAATTCTTGCACCAAGGACTTCACAAGCATGTAAAGGGGGAGCCAAGAGTTTTGAACGGATGTCTCCTTCTGGTTCTATACTGGTTTCTTGAGAAAACAAAAATAAAGAAGCGGATTATCGGGAAAGAGAAGGAAACTCCCAGATTTATAAGATGGTCAATACAAGAGATCATCAAAGAAAAGGAGTATTTGAGAAGACCTGAATTGCTAGAGATAATGGAGGAAACGAGTTCCGGCAATGATGAGCAACAGCAAGATGACAATAGAACACCAAGGACAATTGATTGGGAGCTGCCAATGGAAAATATGAAGAAGAAGCTGACAGAACTTGCCAAAGCAAATGAAGAACTGGTGAACAAAAACACTGAATTGCTCGGCAAGTTAAAGAAAGCGGACAGGCAAATCATTGAGTCAAAGCCGGTTGAAGAGGAAGAATATAAGTGCAGAGAGGATCAACCAGGAACTGAAGAGTTTTTTGAACAAGTTGCAGAACCAGTTCCGTTACGACAGGTATTTCCAGAAGACGATGAACCTGTGACGACCGATCAAGCAAGAGGGCTCAAGAAACATGCCAAGCAGAAGGGCTCAAAACAAACTGTGGAGACTGGTTCGATTGAAAGAGACGTCAACCTGAAGAAGCGTGGGGCACAAAAGAGGATAGAAGAAGAATGGGAGTATAACACCCCTGAAGGGCTAAAGCCAGCAAAAAGAACAAAGGAGAAGCTCTTGGATGAAAAGGTGGCGAATCACTATAAGAACTGGTTTGATTTGAACAAGGACGAGAATGATGAGGTGTACCTCTCAATGTTGAAGGAGGAAATGGAAAAGAAGAAGGTCTCGGTCGGATTCCTAGACATAAAGGCAGTTTGCGCGGCAGTGGTACATGAACAAAAACTGAAGGAGTTCCTAGCTGGAGGAGGAAAACAGGGGGAATTCAAATGTAATGAATTGGATATAGAGATTTCTATTATTAATCCTGTGTGGTCCATCTTCAATAAGGACCTGGTTTTCATTCCAGTACATCACGGGGTCAGCCACCACTATACCTTGGTCTTGATTGACAACGAAGCTCGATGCTTCTATCACCTGAACTCAATGCTACTGCCAAGGAAAGATTACTCTGCCGACACCAACAACCACTTTCAGAATGCAAAGGCAGTGCCAAGGCTTGGACCTGAGGAATGGAGGGAAAACTATGACAAGCAGGACAGCCAAGGAATAGTGGTTGATGGTTACTCGATGATGAGTGCTGAAGAGAAAAGAACCAGAAGATGGATGCTGGACCAAAATGTTTATCAAGAAAGATACAAGCTGAAGGATATCTTATCCTGCCCGCAGCAAAACAAAACATCGGTGGTTATTGAGGGTCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

645

Amino Acids

75.75

Weight (kDa)

6.42

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 48 - 246 3e-12 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 440, 710
AatII GACGTC 1 cut(s) 1188
AccB7I CCANNNNNTGG 2 cut(s) 1730, 1833
AccII CGCG 1 cut(s) 1433
AciI CCGC 5 cut(s) 477, 673, 953, 1433, 1895
AclWI GGATC 4 cut(s) 133, 407, 420, 1020
AcsI RAATTY 3 cut(s) 301, 563, 1493
AcuI CTGAAG 6 cut(s) 1047, 1214, 1269, 1478, 1833, 1895
AcyI GRCGYC 1 cut(s) 1185
AfaI GTAC 6 cut(s) 55, 152, 446, 1358, 1443, 1581
AfiI CCNNNNNNNGG 3 cut(s) 1251, 1730, 1833
AjnI CCWGG 2 cut(s) 1018, 1563
AluBI AGCT 8 cut(s) 385, 458, 853, 880, 1285, 1472, 1631, 1873
AluI AGCT 8 cut(s) 385, 458, 853, 880, 1285, 1472, 1631, 1873
Alw26I GTCTC 4 cut(s) 629, 1157, 1176, 1402
AlwI GGATC 4 cut(s) 133, 407, 420, 1020
AlwNI CAGNNNCTG 2 cut(s) 314, 1025
ApeKI GCWGC 4 cut(s) 282, 455, 853, 1897
ApoI RAATTY 3 cut(s) 301, 563, 1493
AseI ATTAAT 2 cut(s) 374, 1533
Asp700I GAANNNNTTC 2 cut(s) 1056, 1463
AspLEI GCGC 1 cut(s) 1433
AspS9I GGNCC 4 cut(s) 1545, 1561, 1733, 1843
AsuHPI GGTGA 3 cut(s) 340, 925, 1637
AvaII GGWCC 4 cut(s) 1545, 1561, 1733, 1843
AxyI CCTNAGG 1 cut(s) 1737
BaeGI GKGCMC 1 cut(s) 1210
BaeI ACNNNNGTAYC 2 cut(s) 494, 527
BamHI GGATCC 1 cut(s) 412
BanII GRGCYC 2 cut(s) 1122, 1148
BbsI GAAGAC 3 cut(s) 522, 763, 1089
BbvI GCAGC 4 cut(s) 269, 467, 840, 1909
BccI CCATC 4 cut(s) 708, 1556, 1784, 1827
BciT130I CCWGG 2 cut(s) 1020, 1565
BcoDI GTCTC 4 cut(s) 629, 1157, 1176, 1402
BfaI CTAG 3 cut(s) 770, 1412, 1469
BisI GCNGC 5 cut(s) 283, 456, 854, 1434, 1898
BlsI GCNGC 5 cut(s) 284, 457, 855, 1435, 1899
BmcAI AGTACT 1 cut(s) 55
Bme1390I CCNGG 2 cut(s) 1020, 1565
Bme18I GGWCC 4 cut(s) 1545, 1561, 1733, 1843
BmgT120I GGNCC 4 cut(s) 1545, 1561, 1733, 1843
BmiI GGNNCC 3 cut(s) 414, 482, 603
BmrFI CCNGG 2 cut(s) 1020, 1565
BmsI GCATC 3 cut(s) 30, 1625, 1827
BpiI GAAGAC 3 cut(s) 522, 763, 1089
BpmI CTGGAG 1 cut(s) 1494
Bpu10I CCTNAGC 1 cut(s) 386
BpuEI CTTGAG 3 cut(s) 491, 671, 1106
BsaHI GRCGYC 1 cut(s) 1185
BsaI GGTCTC 1 cut(s) 1402
BsaJI CCNNGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
Bsc4I CCNNNNNNNGG 3 cut(s) 1251, 1730, 1833
Bse118I RCCGGY 1 cut(s) 979
Bse1I ACTGG 7 cut(s) 548, 647, 915, 1055, 1171, 1325, 1577
Bse21I CCTNAGG 1 cut(s) 1737
Bse3DI GCAATG 1 cut(s) 805
BseBI CCWGG 2 cut(s) 1020, 1565
BseDI CCNNGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
BseGI GGATG 5 cut(s) 21, 259, 626, 1297, 1842
BseLI CCNNNNNNNGG 3 cut(s) 1251, 1730, 1833
BseMI GCAATG 1 cut(s) 805
BseMII CTCAG 1 cut(s) 1728
BseNI ACTGG 7 cut(s) 548, 647, 915, 1055, 1171, 1325, 1577
BseRI GAGGAG 2 cut(s) 116, 1491
BseSI GKGCMC 1 cut(s) 1210
BseXI GCAGC 4 cut(s) 269, 467, 840, 1909
BsgI GTGCAG 1 cut(s) 1024
Bsh1236I CGCG 1 cut(s) 1433
Bsh1285I CGRYCG 2 cut(s) 1104, 1404
BsiEI CGRYCG 2 cut(s) 1104, 1404
BsiSI CCGG 2 cut(s) 795, 980
BslI CCNNNNNNNGG 3 cut(s) 1251, 1730, 1833
BsmAI GTCTC 4 cut(s) 629, 1157, 1176, 1402
BsmBI CGTCTC 1 cut(s) 1176
BsmI GAATGC 1 cut(s) 1714
Bso31I GGTCTC 1 cut(s) 1402
Bsp1286I GDGCHC 3 cut(s) 1122, 1148, 1210
Bsp143I GATC 5 cut(s) 138, 412, 729, 1012, 1105
BspACI CCGC 5 cut(s) 477, 673, 953, 1433, 1895
BspCNI CTCAG 1 cut(s) 1729
BspFNI CGCG 1 cut(s) 1433
BspLI GGNNCC 3 cut(s) 414, 482, 603
BspPI GGATC 4 cut(s) 133, 407, 420, 1020
BspQI GCTCTTC 1 cut(s) 375
BspTNI GGTCTC 1 cut(s) 1402
BsrDI GCAATG 1 cut(s) 805
BsrFI RCCGGY 1 cut(s) 979
BsrI ACTGG 7 cut(s) 548, 647, 915, 1055, 1171, 1325, 1577
BssAI RCCGGY 1 cut(s) 979
BssECI CCNNGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
BssMI GATC 5 cut(s) 138, 412, 729, 1012, 1105
BssNI GRCGYC 1 cut(s) 1185
BssT1I CCWWGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
Bst2UI CCWGG 2 cut(s) 1020, 1565
Bst4CI ACNGT 3 cut(s) 53, 161, 1159
Bst6I CTCTTC 4 cut(s) 375, 981, 1023, 1809
BstACI GRCGYC 1 cut(s) 1185
BstAPI GCANNNNNTGC 1 cut(s) 314
BstC8I GCNNGC 2 cut(s) 1263, 1895
BstDEI CTNAG 2 cut(s) 386, 1737
BstF5I GGATG 5 cut(s) 21, 259, 626, 1297, 1842
BstFNI CGCG 1 cut(s) 1433
BstHHI GCGC 1 cut(s) 1433
BstKTI GATC 5 cut(s) 141, 415, 732, 1015, 1108
BstMAI GTCTC 4 cut(s) 629, 1157, 1176, 1402
BstMBI GATC 5 cut(s) 138, 412, 729, 1012, 1105
BstMCI CGRYCG 2 cut(s) 1104, 1404
BstMWI GCNNNNNNNGC 3 cut(s) 288, 314, 1430
BstNI CCWGG 2 cut(s) 1020, 1565
BstNSI RCATGY 2 cut(s) 593, 1133
BstSCI CCNGG 2 cut(s) 1018, 1563
BstSLI GKGCMC 1 cut(s) 1210
BstUI CGCG 1 cut(s) 1433
BstV1I GCAGC 4 cut(s) 269, 467, 840, 1909
BstV2I GAAGAC 3 cut(s) 522, 763, 1089
BstX2I RGATCY 2 cut(s) 138, 412
BstYI RGATCY 2 cut(s) 138, 412
Bsu36I CCTNAGG 1 cut(s) 1737
BtsCI GGATG 5 cut(s) 21, 259, 626, 1297, 1842
BtsI GCAGTG 2 cut(s) 1443, 1725
BtsIMutI CAGTG 4 cut(s) 166, 924, 1443, 1725
Cac8I GCNNGC 2 cut(s) 1263, 1895
CaiI CAGNNNCTG 2 cut(s) 314, 1025
CfoI GCGC 1 cut(s) 1433
Cfr10I RCCGGY 1 cut(s) 979
Cfr13I GGNCC 4 cut(s) 1545, 1561, 1733, 1843
CsiI ACCWGGT 1 cut(s) 1563
Csp6I GTAC 6 cut(s) 54, 151, 445, 1357, 1442, 1580
CviAII CATG 5 cut(s) 36, 212, 590, 1130, 1445
CviQI GTAC 6 cut(s) 54, 151, 445, 1357, 1442, 1580
DdeI CTNAG 2 cut(s) 386, 1737
DpnI GATC 5 cut(s) 140, 414, 731, 1014, 1107
DpnII GATC 5 cut(s) 138, 412, 729, 1012, 1105
Eam1104I CTCTTC 4 cut(s) 375, 981, 1023, 1809
EarI CTCTTC 4 cut(s) 375, 981, 1023, 1809
Eco130I CCWWGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
Eco24I GRGCYC 2 cut(s) 1122, 1148
Eco31I GGTCTC 1 cut(s) 1402
Eco32I GATATC 2 cut(s) 262, 1882
Eco47I GGWCC 4 cut(s) 1545, 1561, 1733, 1843
Eco57I CTGAAG 6 cut(s) 1047, 1214, 1269, 1478, 1833, 1895
Eco81I CCTNAGG 1 cut(s) 1737
EcoO109I RGGNCCY 1 cut(s) 1561
EcoRI GAATTC 2 cut(s) 563, 1493
EcoRII CCWGG 2 cut(s) 1018, 1563
EcoRV GATATC 2 cut(s) 262, 1882
EcoT14I CCWWGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
EcoT38I GRGCYC 2 cut(s) 1122, 1148
ErhI CCWWGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
Esp3I CGTCTC 1 cut(s) 1176
FaeI CATG 5 cut(s) 39, 215, 593, 1133, 1448
FalI AAGNNNNNCTT 2 cut(s) 1868, 1900
FatI CATG 5 cut(s) 35, 211, 589, 1129, 1444
FauI CCCGC 2 cut(s) 470, 1902
Fnu4HI GCNGC 5 cut(s) 283, 456, 854, 1434, 1898
FokI GGATG 5 cut(s) 8, 266, 633, 1304, 1849
FriOI GRGCYC 2 cut(s) 1122, 1148
Fsp4HI GCNGC 5 cut(s) 283, 456, 854, 1434, 1898
FspBI CTAG 3 cut(s) 770, 1412, 1469
GlaI GCGC 1 cut(s) 1432
GluI GCNGC 5 cut(s) 283, 456, 854, 1434, 1898
GsuI CTGGAG 1 cut(s) 1494
HapII CCGG 2 cut(s) 795, 980
HhaI GCGC 1 cut(s) 1433
Hin1I GRCGYC 1 cut(s) 1185
Hin1II CATG 5 cut(s) 39, 215, 593, 1133, 1448
Hin6I GCGC 1 cut(s) 1431
HinP1I GCGC 1 cut(s) 1431
HincII GTYRAC 1 cut(s) 1189
HindII GTYRAC 1 cut(s) 1189
HinfI GANTC 9 cut(s) 32, 77, 106, 125, 311, 394, 971, 1306, 1407
HpaII CCGG 2 cut(s) 795, 980
HphI GGTGA 3 cut(s) 340, 925, 1637
Hpy166II GTNNAC 3 cut(s) 916, 1189, 1357
Hpy188I TCNGA 6 cut(s) 86, 130, 253, 399, 1406, 1707
Hpy188III TCNNGA 6 cut(s) 650, 682, 1079, 1123, 1615, 1859
Hpy8I GTNNAC 3 cut(s) 916, 1189, 1357
HpyCH4III ACNGT 3 cut(s) 53, 161, 1159
HpyCH4IV ACGT 1 cut(s) 1185
HpyCH4V TGCA 5 cut(s) 285, 571, 1005, 1049, 1712
HpyF10VI GCNNNNNNNGC 3 cut(s) 288, 314, 1430
HpyF3I CTNAG 2 cut(s) 386, 1737
HpySE526I ACGT 1 cut(s) 1185
Hsp92I GRCGYC 1 cut(s) 1185
Hsp92II CATG 5 cut(s) 39, 215, 593, 1133, 1448
HspAI GCGC 1 cut(s) 1431
Kzo9I GATC 5 cut(s) 138, 412, 729, 1012, 1105
LguI GCTCTTC 1 cut(s) 375
LmnI GCTCC 2 cut(s) 601, 850
Lsp1109I GCAGC 4 cut(s) 269, 467, 840, 1909
LweI GCATC 3 cut(s) 30, 1625, 1827
MabI ACCWGGT 1 cut(s) 1563
MaeI CTAG 3 cut(s) 770, 1412, 1469
MaeII ACGT 1 cut(s) 1185
MaeIII GTNAC 5 cut(s) 161, 546, 1062, 1096, 1793
MalI GATC 5 cut(s) 140, 414, 731, 1014, 1107
MboI GATC 5 cut(s) 138, 412, 729, 1012, 1105
MfeI CAATTG 1 cut(s) 840
MflI RGATCY 2 cut(s) 138, 412
MhlI GDGCHC 3 cut(s) 1122, 1148, 1210
MlyI GAGTC 1 cut(s) 980
MmeI TCCRAC 1 cut(s) 1384
MroXI GAANNNNTTC 2 cut(s) 1056, 1463
MseI TTAA 4 cut(s) 198, 374, 944, 1533
MslI CAYNNNNRTG 2 cut(s) 374, 588
MspI CCGG 2 cut(s) 795, 980
MspR9I CCNGG 2 cut(s) 1020, 1565
MunI CAATTG 1 cut(s) 840
Mva1269I GAATGC 1 cut(s) 1714
MvaI CCWGG 2 cut(s) 1020, 1565
MvnI CGCG 1 cut(s) 1433
MwoI GCNNNNNNNGC 3 cut(s) 288, 314, 1430
NdeII GATC 5 cut(s) 138, 412, 729, 1012, 1105
NlaIII CATG 5 cut(s) 39, 215, 593, 1133, 1448
NlaIV GGNNCC 3 cut(s) 414, 482, 603
NmeAIII GCCGAG 1 cut(s) 915
NmuCI GTSAC 3 cut(s) 161, 546, 1096
NspI RCATGY 2 cut(s) 593, 1133
PciSI GCTCTTC 1 cut(s) 375
PctI GAATGC 1 cut(s) 1714
PdmI GAANNNNTTC 2 cut(s) 1056, 1463
PfeI GAWTC 8 cut(s) 32, 77, 106, 125, 311, 394, 1306, 1407
PflMI CCANNNNNTGG 2 cut(s) 1730, 1833
PkrI GCNGC 5 cut(s) 284, 457, 855, 1435, 1899
PleI GAGTC 1 cut(s) 979
PpsI GAGTC 1 cut(s) 979
PpuMI RGGWCCY 1 cut(s) 1561
PshBI ATTAAT 2 cut(s) 374, 1533
PsiI TTATAA 2 cut(s) 440, 710
Psp5II RGGWCCY 1 cut(s) 1561
Psp6I CCWGG 2 cut(s) 1018, 1563
PspGI CCWGG 2 cut(s) 1018, 1563
PspN4I GGNNCC 3 cut(s) 414, 482, 603
PspPI GGNCC 4 cut(s) 1545, 1561, 1733, 1843
PspPPI RGGWCCY 1 cut(s) 1561
PstNI CAGNNNCTG 2 cut(s) 314, 1025
PsuI RGATCY 2 cut(s) 138, 412
RsaI GTAC 6 cut(s) 55, 152, 446, 1358, 1443, 1581
RsaNI GTAC 6 cut(s) 54, 151, 445, 1357, 1442, 1580
RseI CAYNNNNRTG 2 cut(s) 374, 588
SapI GCTCTTC 1 cut(s) 375
SaqAI TTAA 4 cut(s) 198, 374, 944, 1533
SatI GCNGC 5 cut(s) 283, 456, 854, 1434, 1898
Sau3AI GATC 5 cut(s) 138, 412, 729, 1012, 1105
Sau96I GGNCC 4 cut(s) 1545, 1561, 1733, 1843
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 1 cut(s) 980
ScrFI CCNGG 2 cut(s) 1020, 1565
SduI GDGCHC 3 cut(s) 1122, 1148, 1210
SexAI ACCWGGT 1 cut(s) 1563
SfaNI GCATC 3 cut(s) 30, 1625, 1827
SinI GGWCC 4 cut(s) 1545, 1561, 1733, 1843
SmiMI CAYNNNNRTG 2 cut(s) 374, 588
SmlI CTYRAG 3 cut(s) 506, 650, 1121
SmoI CTYRAG 3 cut(s) 506, 650, 1121
SsiI CCGC 5 cut(s) 477, 673, 953, 1433, 1895
SspMI CTAG 3 cut(s) 770, 1412, 1469
StyD4I CCNGG 2 cut(s) 1018, 1563
StyI CCWWGG 7 cut(s) 416, 574, 833, 1608, 1667, 1724, 1774
TaaI ACNGT 3 cut(s) 53, 161, 1159
TaiI ACGT 1 cut(s) 1188
TaqI TCGA 3 cut(s) 1172, 1633, 1799
TaqII GACCGA 2 cut(s) 1118, 1390
TatI WGTACW 2 cut(s) 53, 1579
TauI GCSGC 1 cut(s) 1436
TfiI GAWTC 8 cut(s) 32, 77, 106, 125, 311, 394, 1306, 1407
Tru1I TTAA 4 cut(s) 198, 374, 944, 1533
Tru9I TTAA 4 cut(s) 198, 374, 944, 1533
TscAI CASTG 4 cut(s) 166, 931, 1443, 1725
TseFI GTSAC 3 cut(s) 161, 546, 1096
TseI GCWGC 4 cut(s) 282, 455, 853, 1897
Tsp45I GTSAC 3 cut(s) 161, 546, 1096
TspGWI ACGGA 2 cut(s) 633, 1050
TspRI CASTG 4 cut(s) 166, 931, 1443, 1725
Van91I CCANNNNNTGG 2 cut(s) 1730, 1833
VpaK11BI GGWCC 4 cut(s) 1545, 1561, 1733, 1843
VspI ATTAAT 2 cut(s) 374, 1533
XapI RAATTY 3 cut(s) 301, 563, 1493
XceI RCATGY 2 cut(s) 593, 1133
XcmI CCANNNNNNNNNTGG 1 cut(s) 33
XmnI GAANNNNTTC 2 cut(s) 1056, 1463
XspI CTAG 3 cut(s) 770, 1412, 1469
ZraI GACGTC 1 cut(s) 1186
ZrmI AGTACT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.