Rmu_sc0010190.1_g000001

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010190.1
OG0000060
Physical Location & Seq
Reverse (-)
1 .. 3275
3275 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010190.1_g000001.1.cds

Sequence Viewer

Length: 2043 bp
atgaaaaaggcagttaaaaaggaggagcaaactgagacaaagaaagccaagattgagtggaagcaacagaagtgcacgctcagtgcattctggaggatggtcaacggtcacaaagacagaataccagaccgaatgaaagagattttgatgggcaccaactttggtgaaatgatggagcctttctggcaggacaagataacagagatccagctgcacaaacatgaagcggacctggagatactcctgaggcacttcgagcgtaccgacaacaagtggaagtttggtgatattgttatggaaataacagaggaagatgtcacggctttgtttcacatccccgctgaaggagaggtgttcaatgtgaacaggagggtggtaagggaagatatggaagactcccctatttttggtagccctttaaagacgcaggctgtcctcagaacaagggtggagtcgacactgatagatgagttgacaaagccagcagaagagaaagatgccaggaagatagccgtgctaatgatgacatatctattcagcacattcttcttcacccgaaccggtgctcagatcacctgggatatggtcgcgatatgtgaacggattgagtccattaacatgtacaattggccaagtttaattctgaacttcttgatggacgggttacagaagtataggaggaacagtccatctgttttgaatggatgccttcttctcatctattactggttccttgagaaaaccaaggcaaagacctggattcctggaagggagaatgagactccacgattcatccgatggtcaataaaggaaatttttagtctggagcagttgtacatgaacgagaacttagctgtggatctgataaaagctggaccatggtctacaaaaattagactggaagacctcgacctgggtgaagaggtgcaggacacaccaagctttgacaactgggtaccactggcaagccaagcagaagagcaacaaaatgaaaggctgacggggaatatcaaggaactgattagggagatggaggaagccattggtgacacaaagcctgcaaaagaaatggaggtaaagttagcaaggcttgtcaaagcaaatgaggacctgactgcacagaacaaggatttatggggaaagcttagggttgccgacgagagaattagggagttggaaattgaaaaacgggccaaaaataacctcatcagggcgctgtacatacggcttgaaagggagaaaggagaggtccccccacctcaaacccaacttgagatagttcctttcaagcaagttgtggtccaccatgatgaaggtgatggaccgagcgtcggagaggaaacccatcatgcagccagtgcgggaaagtcgacggacacggtgacgtcagcgttccctattgcacatgaagtacctgaagaagtaaatgaaagcagtttcccactggggcaacaaaaacatgggaatgaagatgaagatgcccagcttgacaacattataaggaacattgctgaggcagaagtgatgcaattagttggaaaggaaaaaaagaaggaacggaaacatgctgatgaggaacagacgaagaaaactccggagatacattcgatagtgaaaaacgtgaagacataccagagggctgccaagaaagctagagaggaagattgggagtacgacactccagaagaggcaaaaatttcaaagcgagctgcacctaagaaggcaggagtcatgcttcaagcccctggaaaatttcacaacaagttaaagcttaagggagtcaaatgcgataagcaaacatggaagacattggatcctgcagtggcaaggtattatcgagacttcttcaacgttgctcagaaagacacgaccgagtactggatcagcagtgatcttctacgccggatcacgaagcacgacctaagaataataatccaggagggggacattgaaactgacgtgatcgccgtttacattgacttgctgaagtctgatgcagaaaagcaacgttcgcaagtgggattcctcacagtggacgcttca
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

681

Amino Acids

78.95

Weight (kDa)

5.8

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1499
AatII GACGTC 1 cut(s) 1388
Acc65I GGTACC 1 cut(s) 955
AccB1I GGYRCC 2 cut(s) 152, 955
AccI GTMKAC 3 cut(s) 455, 884, 1370
AccII CGCG 1 cut(s) 590
AccIII TCCGGA 1 cut(s) 1594
AciI CCGC 3 cut(s) 227, 339, 1361
AclI AACGTT 2 cut(s) 1851, 2008
AclWI GGATC 6 cut(s) 199, 867, 1808, 1821, 1889, 1913
AcoI YGGCCR 1 cut(s) 629
AcsI RAATTY 3 cut(s) 813, 1695, 1751
AcuI CTGAAG 3 cut(s) 363, 1437, 2006
AcyI GRCGYC 1 cut(s) 1385
AfaI GTAC 8 cut(s) 262, 623, 836, 957, 1220, 1413, 1673, 1877
AfiI CCNNNNNNNGG 8 cut(s) 344, 407, 913, 1210, 1331, 1878, 1942, 2032
AflII CTTAAG 1 cut(s) 1772
AflIII ACRYGT 1 cut(s) 618
AgeI ACCGGT 1 cut(s) 560
AgsI TTSAA 9 cut(s) 358, 700, 1184, 1232, 1288, 1701, 1739, 1849, 1952
AhdI GACNNNNNGTC 1 cut(s) 1328
AjiI CACGTC 1 cut(s) 1960
AjnI CCWGG 8 cut(s) 231, 500, 575, 755, 763, 912, 1744, 1935
AluBI AGCT 9 cut(s) 211, 854, 872, 942, 1144, 1486, 1652, 1709, 1771
AluI AGCT 9 cut(s) 211, 854, 872, 942, 1144, 1486, 1652, 1709, 1771
Alw21I GWGCWC 2 cut(s) 77, 568
Alw26I GTCTC 3 cut(s) 29, 773, 1833
Alw44I GTGCAC 1 cut(s) 73
AlwI GGATC 6 cut(s) 199, 867, 1808, 1821, 1889, 1913
Aor13HI TCCGGA 1 cut(s) 1594
AoxI GGCC 2 cut(s) 629, 1191
ApaLI GTGCAC 1 cut(s) 73
ApeKI GCWGC 4 cut(s) 211, 1352, 1640, 1709
ApoI RAATTY 3 cut(s) 813, 1695, 1751
AsiGI ACCGGT 1 cut(s) 560
Asp718I GGTACC 1 cut(s) 955
AspLEI GCGC 1 cut(s) 1216
AspS9I GGNCC 7 cut(s) 229, 875, 1108, 1191, 1249, 1300, 1322
AsuHPI GGTGA 8 cut(s) 176, 296, 544, 565, 929, 1058, 1328, 1393
AvaII GGWCC 6 cut(s) 229, 875, 1108, 1249, 1300, 1322
AxyI CCTNAGG 1 cut(s) 245
BaeGI GKGCMC 2 cut(s) 77, 155
BalI TGGCCA 1 cut(s) 631
BamHI GGATCC 1 cut(s) 1813
BanI GGYRCC 2 cut(s) 152, 955
BbsI GAAGAC 4 cut(s) 399, 909, 1631, 1811
Bbv12I GWGCWC 2 cut(s) 77, 568
BbvCI CCTCAGC 1 cut(s) 1512
BbvI GCAGC 4 cut(s) 198, 1364, 1627, 1696
BccI CCATC 9 cut(s) 91, 142, 166, 649, 697, 792, 1024, 1313, 1353
BceAI ACGGC 4 cut(s) 336, 497, 1241, 1952
BciT130I CCWGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
BcoDI GTCTC 3 cut(s) 29, 773, 1833
BfaI CTAG 1 cut(s) 1653
BfmI CTRYAG 1 cut(s) 1818
BfoI RGCGCY 1 cut(s) 1217
BfrI CTTAAG 1 cut(s) 1772
BglI GCCNNNNNGGC 1 cut(s) 184
BisI GCNGC 4 cut(s) 212, 1353, 1641, 1710
BlsI GCNGC 4 cut(s) 213, 1354, 1642, 1711
BmcAI AGTACT 1 cut(s) 1877
Bme1390I CCNGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
Bme18I GGWCC 6 cut(s) 229, 875, 1108, 1249, 1300, 1322
BmeRI GACNNNNNGTC 1 cut(s) 1328
BmgBI CACGTC 1 cut(s) 1960
BmgT120I GGNCC 7 cut(s) 229, 875, 1108, 1191, 1249, 1300, 1322
BmiI GGNNCC 6 cut(s) 154, 177, 731, 957, 1251, 1815
BmrFI CCNGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
BmrI ACTGGG 2 cut(s) 961, 1454
BmsI GCATC 5 cut(s) 487, 695, 1468, 1515, 1984
BmuI ACTGGG 2 cut(s) 961, 1454
BoxI GACNNNNGTC 1 cut(s) 880
BpiI GAAGAC 4 cut(s) 399, 909, 1631, 1811
BpmI CTGGAG 4 cut(s) 112, 254, 845, 1665
Bpu10I CCTNAGC 2 cut(s) 1145, 1512
BpuEI CTTGAG 2 cut(s) 755, 1292
BsaHI GRCGYC 1 cut(s) 1385
BsaJI CCNNGG 5 cut(s) 576, 744, 878, 913, 1744
BsaWI WCCGGW 2 cut(s) 560, 1594
BsaXI ACNNNNNCTCC 6 cut(s) 670, 700, 818, 848, 1064, 1094
Bsc4I CCNNNNNNNGG 8 cut(s) 344, 407, 913, 1210, 1331, 1878, 1942, 2032
Bse118I RCCGGY 1 cut(s) 560
Bse1I ACTGG 7 cut(s) 731, 903, 956, 966, 1356, 1449, 1883
Bse21I CCTNAGG 1 cut(s) 245
Bse3DI GCAATG 1 cut(s) 1506
BseAI TCCGGA 1 cut(s) 1594
BseBI CCWGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
BseDI CCNNGG 5 cut(s) 576, 744, 878, 913, 1744
BseGI GGATG 4 cut(s) 102, 333, 710, 792
BseLI CCNNNNNNNGG 8 cut(s) 344, 407, 913, 1210, 1331, 1878, 1942, 2032
BseMI GCAATG 1 cut(s) 1506
BseMII CTCAG 7 cut(s) 24, 94, 236, 451, 581, 1503, 1871
BseNI ACTGG 7 cut(s) 731, 903, 956, 966, 1356, 1449, 1883
BseRI GAGGAG 1 cut(s) 38
BseSI GKGCMC 2 cut(s) 77, 155
BseXI GCAGC 4 cut(s) 198, 1364, 1627, 1696
BseYI CCCAGC 1 cut(s) 1482
BsgI GTGCAG 4 cut(s) 197, 947, 1101, 1695
Bsh1236I CGCG 1 cut(s) 590
Bsh1285I CGRYCG 1 cut(s) 1872
BshFI GGCC 2 cut(s) 631, 1193
BshNI GGYRCC 2 cut(s) 152, 955
BshTI ACCGGT 1 cut(s) 560
BsiEI CGRYCG 1 cut(s) 1872
BsiHKAI GWGCWC 2 cut(s) 77, 568
BsiSI CCGG 3 cut(s) 561, 1595, 1903
BslFI GGGAC 2 cut(s) 1235, 1958
BslI CCNNNNNNNGG 8 cut(s) 344, 407, 913, 1210, 1331, 1878, 1942, 2032
BsmAI GTCTC 3 cut(s) 29, 773, 1833
BsmFI GGGAC 2 cut(s) 1235, 1958
BsmI GAATGC 1 cut(s) 86
BsnI GGCC 2 cut(s) 631, 1193
Bsp1286I GDGCHC 3 cut(s) 77, 155, 568
Bsp13I TCCGGA 1 cut(s) 1594
Bsp1407I TGTACA 3 cut(s) 621, 834, 1218
Bsp143I GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
Bsp19I CCATGG 1 cut(s) 878
Bsp68I TCGCGA 1 cut(s) 590
BspACI CCGC 3 cut(s) 227, 339, 1361
BspANI GGCC 2 cut(s) 631, 1193
BspCNI CTCAG 7 cut(s) 25, 93, 237, 450, 580, 1504, 1870
BspEI TCCGGA 1 cut(s) 1594
BspFNI CGCG 1 cut(s) 590
BspLI GGNNCC 6 cut(s) 154, 177, 731, 957, 1251, 1815
BspMAI CTGCAG 1 cut(s) 1822
BspPI GGATC 6 cut(s) 199, 867, 1808, 1821, 1889, 1913
BspQI GCTCTTC 1 cut(s) 972
BspT107I GGYRCC 2 cut(s) 152, 955
BspTI CTTAAG 1 cut(s) 1772
BsrDI GCAATG 1 cut(s) 1506
BsrFI RCCGGY 1 cut(s) 560
BsrGI TGTACA 3 cut(s) 621, 834, 1218
BsrI ACTGG 7 cut(s) 731, 903, 956, 966, 1356, 1449, 1883
BssAI RCCGGY 1 cut(s) 560
BssECI CCNNGG 5 cut(s) 576, 744, 878, 913, 1744
BssMI GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
BssNI GRCGYC 1 cut(s) 1385
BssT1I CCWWGG 2 cut(s) 744, 878
Bst2UI CCWGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
Bst4CI ACNGT 4 cut(s) 107, 686, 1381, 2032
Bst6I CTCTTC 4 cut(s) 483, 915, 972, 1680
BstACI GRCGYC 1 cut(s) 1385
BstAFI CTTAAG 1 cut(s) 1772
BstAPI GCANNNNNTGC 1 cut(s) 1358
BstAUI TGTACA 3 cut(s) 621, 834, 1218
BstC8I GCNNGC 6 cut(s) 77, 429, 483, 967, 1059, 1707
BstDSI CCRYGG 1 cut(s) 878
BstF5I GGATG 4 cut(s) 102, 333, 710, 792
BstFNI CGCG 1 cut(s) 590
BstH2I RGCGCY 1 cut(s) 1217
BstHHI GCGC 1 cut(s) 1216
BstKTI GATC 8 cut(s) 207, 573, 862, 1816, 1884, 1894, 1908, 1965
BstMAI GTCTC 3 cut(s) 29, 773, 1833
BstMBI GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
BstMCI CGRYCG 1 cut(s) 1872
BstMWI GCNNNNNNNGC 6 cut(s) 184, 256, 971, 1358, 1649, 2011
BstNI CCWGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
BstNSI RCATGY 2 cut(s) 622, 1568
BstPAI GACNNNNGTC 1 cut(s) 880
BstSCI CCNGG 8 cut(s) 231, 500, 575, 755, 763, 912, 1744, 1935
BstSFI CTRYAG 1 cut(s) 1818
BstSLI GKGCMC 2 cut(s) 77, 155
BstUI CGCG 1 cut(s) 590
BstV1I GCAGC 4 cut(s) 198, 1364, 1627, 1696
BstV2I GAAGAC 4 cut(s) 399, 909, 1631, 1811
BstX2I RGATCY 3 cut(s) 204, 859, 1813
BstYI RGATCY 3 cut(s) 204, 859, 1813
Bsu36I CCTNAGG 1 cut(s) 245
BsuRI GGCC 2 cut(s) 631, 1193
BtgI CCRYGG 1 cut(s) 878
BtrI CACGTC 1 cut(s) 1960
BtsCI GGATG 4 cut(s) 102, 333, 710, 792
BtsI GCAGTG 2 cut(s) 1827, 1894
BtsIMutI CAGTG 8 cut(s) 88, 458, 959, 1363, 1442, 1827, 1894, 2037
BtuMI TCGCGA 1 cut(s) 590
Cac8I GCNNGC 6 cut(s) 77, 429, 483, 967, 1059, 1707
CfoI GCGC 1 cut(s) 1216
Cfr10I RCCGGY 1 cut(s) 560
Cfr13I GGNCC 7 cut(s) 229, 875, 1108, 1191, 1249, 1300, 1322
CseI GACGC 2 cut(s) 433, 1318
Csp6I GTAC 8 cut(s) 261, 622, 835, 956, 1219, 1412, 1672, 1876
CspAI ACCGGT 1 cut(s) 560
CviQI GTAC 8 cut(s) 261, 622, 835, 956, 1219, 1412, 1672, 1876
DpnI GATC 8 cut(s) 206, 572, 861, 1815, 1883, 1893, 1907, 1964
DpnII GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
DraI TTTAAA 1 cut(s) 420
DriI GACNNNNNGTC 1 cut(s) 1328
EaeI YGGCCR 1 cut(s) 629
Eam1104I CTCTTC 4 cut(s) 483, 915, 972, 1680
Eam1105I GACNNNNNGTC 1 cut(s) 1328
EarI CTCTTC 4 cut(s) 483, 915, 972, 1680
Eco130I CCWWGG 2 cut(s) 744, 878
Eco47I GGWCC 6 cut(s) 229, 875, 1108, 1249, 1300, 1322
Eco57I CTGAAG 3 cut(s) 363, 1437, 2006
Eco81I CCTNAGG 1 cut(s) 245
EcoO109I RGGNCCY 2 cut(s) 1108, 1249
EcoRII CCWGG 8 cut(s) 231, 500, 575, 755, 763, 912, 1744, 1935
EcoT14I CCWWGG 2 cut(s) 744, 878
ErhI CCWWGG 2 cut(s) 744, 878
FaqI GGGAC 2 cut(s) 1235, 1958
FauI CCCGC 2 cut(s) 346, 1354
FblI GTMKAC 3 cut(s) 455, 884, 1370
Fnu4HI GCNGC 4 cut(s) 212, 1353, 1641, 1710
FokI GGATG 4 cut(s) 109, 320, 717, 779
Fsp4HI GCNGC 4 cut(s) 212, 1353, 1641, 1710
FspBI CTAG 1 cut(s) 1653
GlaI GCGC 1 cut(s) 1215
GluI GCNGC 4 cut(s) 212, 1353, 1641, 1710
GsaI CCCAGC 1 cut(s) 1486
GsuI CTGGAG 4 cut(s) 112, 254, 845, 1665
HaeII RGCGCY 1 cut(s) 1217
HaeIII GGCC 2 cut(s) 631, 1193
HapII CCGG 3 cut(s) 561, 1595, 1903
HgaI GACGC 2 cut(s) 433, 1318
HhaI GCGC 1 cut(s) 1216
Hin1I GRCGYC 1 cut(s) 1385
Hin6I GCGC 1 cut(s) 1214
HinP1I GCGC 1 cut(s) 1214
HincII GTYRAC 4 cut(s) 103, 456, 474, 1371
HindII GTYRAC 4 cut(s) 103, 456, 474, 1371
HindIII AAGCTT 3 cut(s) 940, 1142, 1769
HinfI GANTC 9 cut(s) 395, 452, 608, 760, 781, 789, 1728, 1779, 2022
HpaII CCGG 3 cut(s) 561, 1595, 1903
HphI GGTGA 8 cut(s) 176, 296, 544, 565, 929, 1058, 1328, 1393
Hpy188I TCNGA 8 cut(s) 440, 570, 645, 797, 864, 1334, 1860, 1993
Hpy188III TCNNGA 9 cut(s) 91, 244, 589, 652, 824, 1595, 1682, 1838, 1909
Hpy99I CGWCG 3 cut(s) 1160, 1334, 1375
HpyAV CCTTC 6 cut(s) 338, 719, 762, 1307, 1546, 1714
HpyCH4III ACNGT 4 cut(s) 107, 686, 1381, 2032
HpyCH4IV ACGT 5 cut(s) 1385, 1620, 1851, 1959, 2008
HpyF10VI GCNNNNNNNGC 6 cut(s) 184, 256, 971, 1358, 1649, 2011
HpySE526I ACGT 5 cut(s) 1385, 1620, 1851, 1959, 2008
Hsp92I GRCGYC 1 cut(s) 1385
HspAI GCGC 1 cut(s) 1214
Kpn2I TCCGGA 1 cut(s) 1594
KpnI GGTACC 1 cut(s) 959
Kzo9I GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 3 cut(s) 25, 175, 826
Lsp1109I GCAGC 4 cut(s) 198, 1364, 1627, 1696
LweI GCATC 5 cut(s) 487, 695, 1468, 1515, 1984
MaeI CTAG 1 cut(s) 1653
MaeII ACGT 5 cut(s) 1385, 1620, 1851, 1959, 2008
MaeIII GTNAC 5 cut(s) 107, 316, 663, 1046, 1381
MalI GATC 8 cut(s) 206, 572, 861, 1815, 1883, 1893, 1907, 1964
MboI GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
MfeI CAATTG 1 cut(s) 625
MflI RGATCY 3 cut(s) 204, 859, 1813
MhlI GDGCHC 3 cut(s) 77, 155, 568
MlsI TGGCCA 1 cut(s) 631
MluCI AATT 9 cut(s) 625, 639, 813, 891, 1164, 1179, 1529, 1695, 1751
MluNI TGGCCA 1 cut(s) 631
MlyI GAGTC 6 cut(s) 389, 461, 617, 775, 1737, 1788
MmeI TCCRAC 3 cut(s) 1155, 1312, 1516
Mox20I TGGCCA 1 cut(s) 631
MroI TCCGGA 1 cut(s) 1594
MscI TGGCCA 1 cut(s) 631
MseI TTAA 6 cut(s) 15, 419, 615, 638, 1766, 1773
MslI CAYNNNNRTG 5 cut(s) 219, 617, 1308, 1464, 1569
Msp20I TGGCCA 1 cut(s) 631
MspA1I CMGCKG 2 cut(s) 211, 341
MspCI CTTAAG 1 cut(s) 1772
MspI CCGG 3 cut(s) 561, 1595, 1903
MspR9I CCNGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
MunI CAATTG 1 cut(s) 625
Mva1269I GAATGC 1 cut(s) 86
MvaI CCWGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
MvnI CGCG 1 cut(s) 590
MwoI GCNNNNNNNGC 6 cut(s) 184, 256, 971, 1358, 1649, 2011
NcoI CCATGG 1 cut(s) 878
NdeII GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
NlaIV GGNNCC 6 cut(s) 154, 177, 731, 957, 1251, 1815
NmuCI GTSAC 4 cut(s) 107, 316, 1046, 1381
NruI TCGCGA 1 cut(s) 590
NspI RCATGY 2 cut(s) 622, 1568
PciI ACATGT 1 cut(s) 618
PciSI GCTCTTC 1 cut(s) 972
PcsI WCGNNNNNNNCGW 3 cut(s) 261, 793, 1965
PctI GAATGC 1 cut(s) 86
PfeI GAWTC 3 cut(s) 760, 789, 2022
PfoI TCCNGGA 2 cut(s) 763, 1935
PinAI ACCGGT 1 cut(s) 560
PkrI GCNGC 4 cut(s) 213, 1354, 1642, 1711
PleI GAGTC 6 cut(s) 389, 460, 616, 775, 1736, 1787
PpsI GAGTC 6 cut(s) 389, 460, 616, 775, 1736, 1787
PpuMI RGGWCCY 2 cut(s) 1108, 1249
PscI ACATGT 1 cut(s) 618
PshAI GACNNNNGTC 1 cut(s) 880
PsiI TTATAA 1 cut(s) 1499
Psp1406I AACGTT 2 cut(s) 1851, 2008
Psp5II RGGWCCY 2 cut(s) 1108, 1249
Psp6I CCWGG 8 cut(s) 231, 500, 575, 755, 763, 912, 1744, 1935
PspFI CCCAGC 1 cut(s) 1482
PspGI CCWGG 8 cut(s) 231, 500, 575, 755, 763, 912, 1744, 1935
PspN4I GGNNCC 6 cut(s) 154, 177, 731, 957, 1251, 1815
PspPI GGNCC 7 cut(s) 229, 875, 1108, 1191, 1249, 1300, 1322
PspPPI RGGWCCY 2 cut(s) 1108, 1249
PstI CTGCAG 1 cut(s) 1822
PsuI RGATCY 3 cut(s) 204, 859, 1813
PvuII CAGCTG 1 cut(s) 211
RruI TCGCGA 1 cut(s) 590
RsaI GTAC 8 cut(s) 262, 623, 836, 957, 1220, 1413, 1673, 1877
RsaNI GTAC 8 cut(s) 261, 622, 835, 956, 1219, 1412, 1672, 1876
RseI CAYNNNNRTG 5 cut(s) 219, 617, 1308, 1464, 1569
SalI GTCGAC 2 cut(s) 454, 1369
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 6 cut(s) 15, 419, 615, 638, 1766, 1773
SatI GCNGC 4 cut(s) 212, 1353, 1641, 1710
Sau3AI GATC 8 cut(s) 204, 570, 859, 1813, 1881, 1891, 1905, 1962
Sau96I GGNCC 7 cut(s) 229, 875, 1108, 1191, 1249, 1300, 1322
ScaI AGTACT 1 cut(s) 1877
SchI GAGTC 6 cut(s) 389, 461, 617, 775, 1737, 1788
ScrFI CCNGG 8 cut(s) 233, 502, 577, 757, 765, 914, 1746, 1937
SduI GDGCHC 3 cut(s) 77, 155, 568
SfaNI GCATC 5 cut(s) 487, 695, 1468, 1515, 1984
SfcI CTRYAG 1 cut(s) 1818
SinI GGWCC 6 cut(s) 229, 875, 1108, 1249, 1300, 1322
SmiMI CAYNNNNRTG 5 cut(s) 219, 617, 1308, 1464, 1569
SmlI CTYRAG 3 cut(s) 734, 1271, 1772
SmoI CTYRAG 3 cut(s) 734, 1271, 1772
Sse9I AATT 9 cut(s) 625, 639, 813, 891, 1164, 1179, 1529, 1695, 1751
SsiI CCGC 3 cut(s) 227, 339, 1361
SspMI CTAG 1 cut(s) 1653
StyD4I CCNGG 8 cut(s) 231, 500, 575, 755, 763, 912, 1744, 1935
StyI CCWWGG 2 cut(s) 744, 878
TaaI ACNGT 4 cut(s) 107, 686, 1381, 2032
TaiI ACGT 5 cut(s) 1388, 1623, 1854, 1962, 2011
TaqI TCGA 6 cut(s) 255, 455, 909, 1370, 1607, 1837
TaqII GACCGA 3 cut(s) 144, 1339, 1886
TasI AATT 9 cut(s) 625, 639, 813, 891, 1164, 1179, 1529, 1695, 1751
TatI WGTACW 4 cut(s) 621, 834, 1218, 1875
TfiI GAWTC 3 cut(s) 760, 789, 2022
Tru1I TTAA 6 cut(s) 15, 419, 615, 638, 1766, 1773
Tru9I TTAA 6 cut(s) 15, 419, 615, 638, 1766, 1773
TscAI CASTG 8 cut(s) 88, 465, 966, 1363, 1449, 1827, 1894, 2037
TseFI GTSAC 4 cut(s) 107, 316, 1046, 1381
TseI GCWGC 4 cut(s) 211, 1352, 1640, 1709
Tsp45I GTSAC 4 cut(s) 107, 316, 1046, 1381
TspGWI ACGGA 3 cut(s) 616, 1388, 1573
TspRI CASTG 8 cut(s) 88, 465, 966, 1363, 1449, 1827, 1894, 2037
Vha464I CTTAAG 1 cut(s) 1772
VneI GTGCAC 1 cut(s) 73
VpaK11BI GGWCC 6 cut(s) 229, 875, 1108, 1249, 1300, 1322
XapI RAATTY 3 cut(s) 813, 1695, 1751
XceI RCATGY 2 cut(s) 622, 1568
XmiI GTMKAC 3 cut(s) 455, 884, 1370
XspI CTAG 1 cut(s) 1653
ZraI GACGTC 1 cut(s) 1386
ZrmI AGTACT 1 cut(s) 1877
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.