FvH4_4g08530

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000060
Physical Location & Seq
Forward (+)
8564867 .. 8571790
6924 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g08530.t1

Sequence Viewer

Length: 2715 bp
ATGAGAAGAGATGGAATGGGAAATGGGATTGGTGGTCACTCACGGGAAAGGGCAGAGCCCTTCCGTTCCCCTTCATTGTGTGCAGCTGTGTTCTCACCACTTCACTCCATCGACGCCACTTCGCTGCTTCACTCCATCGACGCCGCTTTGCTTCTTCAATCAATCGACACTGCTGCCTCACTCCTCACTCCATCAAGACCTCAGCACCCATCCCCGCGCGCTGCTTCGCTGCTTCAGTACATCGCCGCCGCTGCTTCAGTACTTCACCGCTGTTGCTTCACTCCATCACCACCACTACATCGCGCTAAATTCATCTTTTTCAGGATGGCACGAAGGCAACTTGTTACTAGTCCAGAGTCTGAGGAAACCTCACCATCTACGTCCGTCAACACAAGCATGAATTTGCGCTCATATATACAACGGGAAAAATTGAAGAAGAGAGCATTAGAAGTGGCAGAAATAGCGAAGGATGACAAGGATGAGGAGGAGGACGAGGATGAGGACCTGGAAAAGATTCCGCACACTCAACATAAATGTACTCTGGTCAGCAAATTTGAGTTGGATATAGAAATTTTATTGAGGCACTATTGCAAGGAGACAAAAAAGTTCATGTTTGGAGAAAAAGAAATGGAGAGTAAAGAGGAAGATGTGCATCTTTTGTTTGGATTAACAAAAGAAGGTGAAAATGAGGAAGAGAAAATCTCCAGGAGAAAGAAGAGCAGCCAACAGTCAACTATATTCGGCAAAACGAAAGGATCCATCTTTAGGAAGATGATCCACGACAAGTTGACAGAAGAGCTCAACAAGATTAAGAACAAGGAGACAGAACCAAGGAAAATTGCTTCCTTGATCATAATGTTCCTACTGGCTACTTTCTTCTTCAGCACATCTGGAAGCCAAATTGAATGGCAATTGGTGCTGACATTTCTGCCTCTGTACTGCTTCTTGGAGCGTACAAAAATCAAGGAAATGATCCAGAAGAAACAAGCAGCTATGCCAAGATTTGATGAGGAAGAAAGCACTTCCGGATCAGAGGAATATGGCACCCCAGACGAACATGGCACCCCGAGCTTTGAAGAATGGGTTCCTTTATCAAGCCAGCAAGAAGTGGAAGAAAATAAAAGAGTGGGCGACAATTTTAAGACACTACTGACAGACTTGGAGGAGGAGATCCCAGAAGATTTGAATGAGAAGCTAAAAGAACTCGGCAAAGTAAACGAAGAACTCCAGAATAGAATCAATGATTACGTGCACAAGTTACAGCTTGCCGATGACAAAATAAAGCAGCTAGAGATGGAGAAAAGGGCGCAAGACAGCCTCAACAAGGCTCTGAAGAGAAAGCTTAAAAAAGCAAAATCCTCAGCAAATGGACCTCCCGAGCAGAAAAGGCAATTCGGTGGGGAAGAATATGGCTGCCAAGGAGATGAACAAACAAAAAGGAATGAAAACCAGAACAGAAGCCTGATAGTCAAGTTCAAAGTTGGAACTGCACAAACAACACAATCTGCAGATGATCAACCAGAAGCTTTGGCTGTGATACATGATGAAAAACCACTGAATCACATATCTCCAGTAATGGACTATGAGGACTTGCCGCTCACAGATGATGACATCTGTAATTTAGATAAGATAGTTGAGTCCCAAGCTGCATCTATCCAACAATCAGCAACAGAAAAGGACAACGACATCTCTGTGACAGTTCAGTCCCAAGAGTACGACTCTCCAAAAGACATTCAAGTCCACAAAAAAATTATAATCAAGAATCTGAAGTGTGACAACAGTACATGGGATTCACTGGGCGACGATTTGAAAATGCACTACAAACAATGGTTTGAAGCCCGCTCGAACAAAAAGGAAGATGAAGCGTACTGGACATGTCCTGAAGGCTGGCACTGTTTATCAAAGAGTGACTTGAAAAGGATCATCGAACACTCAGACATATTGTCGAGTAGCCTGCAAGTGTACATAAGGTTGTTGAAGGAAAGGGCAGAAGCTGCCAAACTTCCTGTTGGATTCATGAACATGGAGATTGTGAAGGATGTGATAGAGCATGAAACAATGTTGGAACTGCACAAGCTAAATGGAGGAACAACTGGAGACTTCAAAAGTGGTTATGAACTCGGTATGGAGGAAAACTTCTATAACCCGCTTTGGACCCTGTTTGGAAAGCAGATGGTCTTCATTCCGTTACATCACGGGTCCAGCCTTCACTACACTTTGCTGCTGATTGACAACATCAACAAACGCTTTTATCACATGAACTCTTCGCTGCCAACACCGTACAAAGAAAAAAACAACTTTCACTTCAAAAATCCAAAAGCAGTGGTGAAGCACATCAAGGAGTTCATCAAACATATACATTATACAACTGTGTTTACTTTGAGCCAAGACCTTGACCAGAATGAATATAGGGAAGATTACGCGATTGATTACGCACCTGAGGACAGTCAAGGCAGAAAACCTAGCAACATAGTGAAAATGACAGAGGACGAAAAGGTGACAATACGTTGGATTATTGATAATAACATCCATCACAAACCATACAAACTGACCGAACACCGCACATGCCCCCAGCAAAATGTATCATCGTCTGATTGTGGTCCATTTGTTCTACATTATATGGAGGCAATGTGTGCTGGGTTGGATCTAAACCAAGAAGGTGGCAACCAAATGAGGAAGAAGATGTTAGAGGAGTTAGCGAAATTAAACAAATGA

Protein Analysis

905

Amino Acids

104.04

Weight (kDa)

5.89

Isoelectric Point (pI)

59.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1754
AasI GACNNNNNNGTC 2 cut(s) 1702, 1736
AccB1I GGYRCC 2 cut(s) 1043, 1061
AccBSI CCGCTC 2 cut(s) 1597, 1842
AccII CGCG 4 cut(s) 217, 219, 303, 2423
AccIII TCCGGA 1 cut(s) 1025
AclWI GGATC 8 cut(s) 750, 763, 769, 967, 1036, 1165, 1928, 2652
AcsI RAATTY 4 cut(s) 308, 400, 551, 570
AcuI CTGAAG 6 cut(s) 218, 240, 865, 1352, 1787, 1902
AcyI GRCGYC 2 cut(s) 114, 141
AfiI CCNNNNNNNGG 2 cut(s) 765, 1324
AflIII ACRYGT 1 cut(s) 1874
AhdI GACNNNNNGTC 1 cut(s) 1942
AhlI ACTAGT 1 cut(s) 347
AjnI CCWGG 2 cut(s) 504, 704
Alw21I GWGCWC 2 cut(s) 801, 1254
Alw26I GTCTC 3 cut(s) 590, 815, 2091
Alw44I GTGCAC 1 cut(s) 1250
AlwI GGATC 8 cut(s) 750, 763, 769, 967, 1036, 1165, 1928, 2652
AlwNI CAGNNNCTG 2 cut(s) 359, 1994
Ama87I CYCGRG 2 cut(s) 1066, 1376
Aor13HI TCCGGA 1 cut(s) 1025
ApaLI GTGCAC 1 cut(s) 1250
ApoI RAATTY 4 cut(s) 308, 400, 551, 570
Asp700I GAANNNNTTC 2 cut(s) 513, 1083
AspLEI GCGC 5 cut(s) 219, 221, 305, 408, 1309
AspS9I GGNCC 5 cut(s) 502, 1370, 2154, 2199, 2600
AsuHPI GGTGA 7 cut(s) 87, 257, 279, 363, 692, 2338, 2509
AvaI CYCGRG 2 cut(s) 1066, 1376
AvaII GGWCC 5 cut(s) 502, 1370, 2154, 2199, 2600
AxyI CCTNAGG 1 cut(s) 2439
BaeGI GKGCMC 1 cut(s) 1254
BamHI GGATCC 1 cut(s) 755
BanI GGYRCC 2 cut(s) 1043, 1061
BanII GRGCYC 2 cut(s) 60, 801
BbsI GAAGAC 1 cut(s) 2170
Bbv12I GWGCWC 2 cut(s) 801, 1254
BbvCI CCTCAGC 2 cut(s) 201, 1360
BcgI CGANNNNNNTGC 4 cut(s) 155, 189, 1936, 1970
BciT130I CCWGG 2 cut(s) 506, 706
BclI TGATCA 2 cut(s) 849, 1513
BcoDI GTCTC 3 cut(s) 590, 815, 2091
BcuI ACTAGT 1 cut(s) 347
BfaI CTAG 3 cut(s) 348, 1289, 2463
BfmI CTRYAG 1 cut(s) 1506
BmcAI AGTACT 1 cut(s) 261
Bme1390I CCNGG 2 cut(s) 506, 706
Bme18I GGWCC 5 cut(s) 502, 1370, 2154, 2199, 2600
BmeRI GACNNNNNGTC 1 cut(s) 1942
BmeT110I CYCGRG 2 cut(s) 1066, 1376
BmgT120I GGNCC 5 cut(s) 502, 1370, 2154, 2199, 2600
BmiI GGNNCC 6 cut(s) 757, 1045, 1063, 1086, 2156, 2200
BmrFI CCNGG 2 cut(s) 506, 706
BmrI ACTGGG 1 cut(s) 1805
BmsI GCATC 2 cut(s) 661, 1658
BmuI ACTGGG 1 cut(s) 1805
BpiI GAAGAC 1 cut(s) 2170
BplI GAGNNNNNCTC 6 cut(s) 353, 385, 686, 718, 1703, 1735
BpmI CTGGAG 4 cut(s) 688, 1211, 1554, 2115
Bpu10I CCTNAGC 2 cut(s) 201, 1360
BsaAI YACGTR 1 cut(s) 1249
BsaBI GATNNNNATC 1 cut(s) 651
BsaHI GRCGYC 2 cut(s) 114, 141
BsaJI CCNNGG 2 cut(s) 830, 1417
BsaWI WCCGGW 1 cut(s) 1025
BsaXI ACNNNNNCTCC 2 cut(s) 2615, 2645
Bsc4I CCNNNNNNNGG 2 cut(s) 765, 1324
Bse1I ACTGG 5 cut(s) 870, 1571, 1800, 1874, 2098
Bse21I CCTNAGG 1 cut(s) 2439
Bse3DI GCAATG 1 cut(s) 2634
Bse8I GATNNNNATC 1 cut(s) 651
BseAI TCCGGA 1 cut(s) 1025
BseBI CCWGG 2 cut(s) 506, 706
BseDI CCNNGG 2 cut(s) 830, 1417
BseGI GGATG 7 cut(s) 209, 330, 475, 484, 502, 2044, 2526
BseJI GATNNNNATC 1 cut(s) 651
BseLI CCNNNNNNNGG 2 cut(s) 765, 1324
BseMI GCAATG 1 cut(s) 2634
BseMII CTCAG 5 cut(s) 215, 351, 1374, 1947, 2430
BseNI ACTGG 5 cut(s) 870, 1571, 1800, 1874, 2098
BsePI GCGCGC 1 cut(s) 217
BseRI GAGGAG 6 cut(s) 173, 497, 500, 1178, 1181, 2705
BseSI GKGCMC 1 cut(s) 1254
BseYI CCCAGC 2 cut(s) 2571, 2636
BsgI GTGCAG 3 cut(s) 102, 1473, 2054
Bsh1236I CGCG 4 cut(s) 217, 219, 303, 2423
BshNI GGYRCC 2 cut(s) 1043, 1061
BsiHKAI GWGCWC 2 cut(s) 801, 1254
BsiHKCI CYCGRG 2 cut(s) 1066, 1376
BsiSI CCGG 1 cut(s) 1026
BslFI GGGAC 2 cut(s) 1624, 1690
BslI CCNNNNNNNGG 2 cut(s) 765, 1324
BsmAI GTCTC 3 cut(s) 590, 815, 2091
BsmFI GGGAC 2 cut(s) 1624, 1690
BsoBI CYCGRG 2 cut(s) 1066, 1376
Bsp1286I GDGCHC 3 cut(s) 60, 801, 1254
Bsp13I TCCGGA 1 cut(s) 1025
Bsp1407I TGTACA 1 cut(s) 1962
Bsp143I GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
BspCNI CTCAG 5 cut(s) 214, 352, 1373, 1946, 2431
BspEI TCCGGA 1 cut(s) 1025
BspFNI CGCG 4 cut(s) 217, 219, 303, 2423
BspHI TCATGA 1 cut(s) 2016
BspLI GGNNCC 6 cut(s) 757, 1045, 1063, 1086, 2156, 2200
BspMAI CTGCAG 1 cut(s) 1510
BspPI GGATC 8 cut(s) 750, 763, 769, 967, 1036, 1165, 1928, 2652
BspQI GCTCTTC 2 cut(s) 710, 789
BspT107I GGYRCC 2 cut(s) 1043, 1061
BsrBI CCGCTC 2 cut(s) 1597, 1842
BsrDI GCAATG 1 cut(s) 2634
BsrGI TGTACA 1 cut(s) 1962
BsrI ACTGG 5 cut(s) 870, 1571, 1800, 1874, 2098
BssECI CCNNGG 2 cut(s) 830, 1417
BssHII GCGCGC 1 cut(s) 217
BssMI GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
BssNI GRCGYC 2 cut(s) 114, 141
BssT1I CCWWGG 2 cut(s) 830, 1417
Bst2UI CCWGG 2 cut(s) 506, 706
Bst4CI ACNGT 7 cut(s) 729, 1699, 1781, 1895, 2280, 2371, 2447
Bst6I CTCTTC 6 cut(s) 431, 687, 710, 789, 1328, 2269
BstACI GRCGYC 2 cut(s) 114, 141
BstAPI GCANNNNNTGC 3 cut(s) 916, 1994, 2633
BstAUI TGTACA 1 cut(s) 1962
BstBAI YACGTR 1 cut(s) 1249
BstC8I GCNNGC 6 cut(s) 219, 1100, 1266, 1840, 1889, 1955
BstDEI CTNAG 5 cut(s) 201, 360, 1360, 1933, 2439
BstENI CCTNNNNNAGG 1 cut(s) 1322
BstF5I GGATG 7 cut(s) 209, 330, 475, 484, 502, 2044, 2526
BstFNI CGCG 4 cut(s) 217, 219, 303, 2423
BstHHI GCGC 5 cut(s) 219, 221, 305, 408, 1309
BstKTI GATC 9 cut(s) 758, 777, 852, 975, 1031, 1173, 1516, 1923, 2647
BstMAI GTCTC 3 cut(s) 590, 815, 2091
BstMBI GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
BstMWI GCNNNNNNNGC 7 cut(s) 251, 461, 916, 1068, 1387, 1994, 2633
BstNI CCWGG 2 cut(s) 506, 706
BstNSI RCATGY 2 cut(s) 1878, 2568
BstSCI CCNGG 2 cut(s) 504, 704
BstSFI CTRYAG 1 cut(s) 1506
BstSLI GKGCMC 1 cut(s) 1254
BstUI CGCG 4 cut(s) 217, 219, 303, 2423
BstV2I GAAGAC 1 cut(s) 2170
BstX2I RGATCY 3 cut(s) 755, 1170, 2644
BstXI CCANNNNNNTGG 1 cut(s) 2660
BstYI RGATCY 3 cut(s) 755, 1170, 2644
Bsu36I CCTNAGG 1 cut(s) 2439
BtgZI GCGATG 2 cut(s) 226, 284
BtsCI GGATG 7 cut(s) 209, 330, 475, 484, 502, 2044, 2526
BtsI GCAGTG 2 cut(s) 168, 2328
BtsIMutI CAGTG 5 cut(s) 168, 1553, 1793, 1891, 2328
Cac8I GCNNGC 6 cut(s) 219, 1100, 1266, 1840, 1889, 1955
CaiI CAGNNNCTG 2 cut(s) 359, 1994
CciI TCATGA 1 cut(s) 2016
CfoI GCGC 5 cut(s) 219, 221, 305, 408, 1309
Cfr13I GGNCC 5 cut(s) 502, 1370, 2154, 2199, 2600
CseI GACGC 2 cut(s) 122, 149
CspCI CAANNNNNGTGG 2 cut(s) 2304, 2339
DdeI CTNAG 5 cut(s) 201, 360, 1360, 1933, 2439
DpnI GATC 9 cut(s) 757, 776, 851, 974, 1030, 1172, 1515, 1922, 2646
DpnII GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
DrdI GACNNNNNNGTC 2 cut(s) 1702, 1736
DriI GACNNNNNGTC 1 cut(s) 1942
DseDI GACNNNNNNGTC 2 cut(s) 1702, 1736
Eam1104I CTCTTC 6 cut(s) 431, 687, 710, 789, 1328, 2269
Eam1105I GACNNNNNGTC 1 cut(s) 1942
EarI CTCTTC 6 cut(s) 431, 687, 710, 789, 1328, 2269
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 830, 1417
Eco24I GRGCYC 2 cut(s) 60, 801
Eco47I GGWCC 5 cut(s) 502, 1370, 2154, 2199, 2600
Eco53kI GAGCTC 1 cut(s) 799
Eco57I CTGAAG 6 cut(s) 218, 240, 865, 1352, 1787, 1902
Eco81I CCTNAGG 1 cut(s) 2439
Eco88I CYCGRG 2 cut(s) 1066, 1376
EcoICRI GAGCTC 1 cut(s) 799
EcoNI CCTNNNNNAGG 1 cut(s) 1322
EcoO109I RGGNCCY 1 cut(s) 502
EcoRII CCWGG 2 cut(s) 504, 704
EcoT14I CCWWGG 2 cut(s) 830, 1417
EcoT38I GRGCYC 2 cut(s) 60, 801
ErhI CCWWGG 2 cut(s) 830, 1417
FalI AAGNNNNNCTT 2 cut(s) 1895, 1927
FaqI GGGAC 2 cut(s) 1624, 1690
FauI CCCGC 3 cut(s) 222, 1847, 2154
FbaI TGATCA 2 cut(s) 849, 1513
FokI GGATG 7 cut(s) 196, 337, 482, 491, 509, 2051, 2513
FriOI GRGCYC 2 cut(s) 60, 801
FspBI CTAG 3 cut(s) 348, 1289, 2463
GlaI GCGC 5 cut(s) 218, 220, 304, 407, 1308
GsaI CCCAGC 2 cut(s) 2575, 2640
GsuI CTGGAG 4 cut(s) 688, 1211, 1554, 2115
HapII CCGG 1 cut(s) 1026
HgaI GACGC 2 cut(s) 122, 149
HhaI GCGC 5 cut(s) 219, 221, 305, 408, 1309
Hin1I GRCGYC 2 cut(s) 114, 141
Hin6I GCGC 5 cut(s) 217, 219, 303, 406, 1307
HinP1I GCGC 5 cut(s) 217, 219, 303, 406, 1307
HincII GTYRAC 3 cut(s) 388, 732, 789
HindII GTYRAC 3 cut(s) 388, 732, 789
HindIII AAGCTT 2 cut(s) 1340, 1524
HinfI GANTC 9 cut(s) 356, 514, 1236, 1558, 1637, 1718, 1762, 1790, 2013
HpaII CCGG 1 cut(s) 1026
HphI GGTGA 7 cut(s) 87, 257, 279, 363, 692, 2338, 2509
Hpy166II GTNNAC 8 cut(s) 388, 732, 789, 1216, 1252, 1741, 1963, 2376
Hpy188I TCNGA 6 cut(s) 361, 1033, 1332, 1767, 1936, 2593
Hpy8I GTNNAC 8 cut(s) 388, 732, 789, 1216, 1252, 1741, 1963, 2376
Hpy99I CGWCG 3 cut(s) 116, 143, 1805
HpyCH4III ACNGT 7 cut(s) 729, 1699, 1781, 1895, 2280, 2371, 2447
HpyCH4IV ACGT 3 cut(s) 380, 1248, 2506
HpyF10VI GCNNNNNNNGC 7 cut(s) 251, 461, 916, 1068, 1387, 1994, 2633
HpyF3I CTNAG 5 cut(s) 201, 360, 1360, 1933, 2439
HpySE526I ACGT 3 cut(s) 380, 1248, 2506
Hsp92I GRCGYC 2 cut(s) 114, 141
HspAI GCGC 5 cut(s) 217, 219, 303, 406, 1307
Kpn2I TCCGGA 1 cut(s) 1025
Ksp22I TGATCA 2 cut(s) 849, 1513
Kzo9I GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
LguI GCTCTTC 2 cut(s) 710, 789
LmnI GCTCC 1 cut(s) 949
LweI GCATC 2 cut(s) 661, 1658
MaeI CTAG 3 cut(s) 348, 1289, 2463
MaeII ACGT 3 cut(s) 380, 1248, 2506
MaeIII GTNAC 8 cut(s) 35, 343, 1257, 1693, 1772, 1907, 2187, 2497
MalI GATC 9 cut(s) 757, 776, 851, 974, 1030, 1172, 1515, 1922, 2646
MbiI CCGCTC 2 cut(s) 1597, 1842
MboI GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
MfeI CAATTG 1 cut(s) 911
MflI RGATCY 3 cut(s) 755, 1170, 2644
MhlI GDGCHC 3 cut(s) 60, 801, 1254
MlyI GAGTC 3 cut(s) 365, 1646, 1712
MmeI TCCRAC 7 cut(s) 540, 1462, 1681, 1990, 2043, 2489, 2622
MroI TCCGGA 1 cut(s) 1025
MroXI GAANNNNTTC 2 cut(s) 513, 1083
MseI TTAA 5 cut(s) 668, 810, 1140, 1344, 2705
MslI CAYNNNNRTG 3 cut(s) 395, 1691, 2021
MspA1I CMGCKG 3 cut(s) 86, 251, 270
MspI CCGG 1 cut(s) 1026
MspR9I CCNGG 2 cut(s) 506, 706
MunI CAATTG 1 cut(s) 911
MvaI CCWGG 2 cut(s) 506, 706
MvnI CGCG 4 cut(s) 217, 219, 303, 2423
MwoI GCNNNNNNNGC 7 cut(s) 251, 461, 916, 1068, 1387, 1994, 2633
NdeII GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
NlaIV GGNNCC 6 cut(s) 757, 1045, 1063, 1086, 2156, 2200
NmeAIII GCCGAG 1 cut(s) 1185
NmuCI GTSAC 5 cut(s) 35, 1693, 1772, 1907, 2497
NspI RCATGY 2 cut(s) 1878, 2568
PagI TCATGA 1 cut(s) 2016
PauI GCGCGC 1 cut(s) 217
PciI ACATGT 1 cut(s) 1874
PciSI GCTCTTC 2 cut(s) 710, 789
PdmI GAANNNNTTC 2 cut(s) 513, 1083
PfeI GAWTC 6 cut(s) 514, 1236, 1558, 1762, 1790, 2013
PfoI TCCNGGA 1 cut(s) 704
PleI GAGTC 3 cut(s) 364, 1645, 1712
PpsI GAGTC 3 cut(s) 364, 1645, 1712
Ppu21I YACGTR 1 cut(s) 1249
PpuMI RGGWCCY 1 cut(s) 502
PscI ACATGT 1 cut(s) 1874
PsiI TTATAA 1 cut(s) 1754
Psp124BI GAGCTC 1 cut(s) 801
Psp5II RGGWCCY 1 cut(s) 502
Psp6I CCWGG 2 cut(s) 504, 704
PspFI CCCAGC 2 cut(s) 2571, 2636
PspGI CCWGG 2 cut(s) 504, 704
PspN4I GGNNCC 6 cut(s) 757, 1045, 1063, 1086, 2156, 2200
PspPI GGNCC 5 cut(s) 502, 1370, 2154, 2199, 2600
PspPPI RGGWCCY 1 cut(s) 502
PstI CTGCAG 1 cut(s) 1510
PstNI CAGNNNCTG 2 cut(s) 359, 1994
PsuI RGATCY 3 cut(s) 755, 1170, 2644
PteI GCGCGC 1 cut(s) 217
PvuII CAGCTG 1 cut(s) 86
RseI CAYNNNNRTG 3 cut(s) 395, 1691, 2021
SacI GAGCTC 1 cut(s) 801
SapI GCTCTTC 2 cut(s) 710, 789
SaqAI TTAA 5 cut(s) 668, 810, 1140, 1344, 2705
Sau3AI GATC 9 cut(s) 755, 774, 849, 972, 1028, 1170, 1513, 1920, 2644
Sau96I GGNCC 5 cut(s) 502, 1370, 2154, 2199, 2600
ScaI AGTACT 1 cut(s) 261
SchI GAGTC 3 cut(s) 365, 1646, 1712
ScrFI CCNGG 2 cut(s) 506, 706
SduI GDGCHC 3 cut(s) 60, 801, 1254
SfaNI GCATC 2 cut(s) 661, 1658
SfcI CTRYAG 1 cut(s) 1506
SinI GGWCC 5 cut(s) 502, 1370, 2154, 2199, 2600
SmiMI CAYNNNNRTG 3 cut(s) 395, 1691, 2021
SpeI ACTAGT 1 cut(s) 347
SspMI CTAG 3 cut(s) 348, 1289, 2463
SstI GAGCTC 1 cut(s) 801
StyD4I CCNGG 2 cut(s) 504, 704
StyI CCWWGG 2 cut(s) 830, 1417
TaaI ACNGT 7 cut(s) 729, 1699, 1781, 1895, 2280, 2371, 2447
TaiI ACGT 3 cut(s) 383, 1251, 2509
TaqI TCGA 6 cut(s) 111, 138, 165, 1844, 1926, 1946
TaqII GACCGA 1 cut(s) 2567
TatI WGTACW 6 cut(s) 237, 259, 536, 936, 1781, 1962
TauI GCSGC 4 cut(s) 146, 248, 251, 1597
TfiI GAWTC 6 cut(s) 514, 1236, 1558, 1762, 1790, 2013
Tru1I TTAA 5 cut(s) 668, 810, 1140, 1344, 2705
Tru9I TTAA 5 cut(s) 668, 810, 1140, 1344, 2705
TscAI CASTG 5 cut(s) 175, 1560, 1800, 1898, 2328
TseFI GTSAC 5 cut(s) 35, 1693, 1772, 1907, 2497
Tsp45I GTSAC 5 cut(s) 35, 1693, 1772, 1907, 2497
TspGWI ACGGA 3 cut(s) 53, 373, 2175
TspRI CASTG 5 cut(s) 175, 1560, 1800, 1898, 2328
VneI GTGCAC 1 cut(s) 1250
VpaK11BI GGWCC 5 cut(s) 502, 1370, 2154, 2199, 2600
XagI CCTNNNNNAGG 1 cut(s) 1322
XapI RAATTY 4 cut(s) 308, 400, 551, 570
XceI RCATGY 2 cut(s) 1878, 2568
XmnI GAANNNNTTC 2 cut(s) 513, 1083
XspI CTAG 3 cut(s) 348, 1289, 2463
ZrmI AGTACT 1 cut(s) 261
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.