Rmu_sc0006854.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006854.1
OG0000060
Physical Location & Seq
Reverse (-)
38420 .. 40347
1928 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006854.1_g000011.1.cds

Sequence Viewer

Length: 1203 bp
atgggatctcagcaagaaggtgctcaaggaggaacggaaggcatcttgatatttgacgtcaatatgaggaaagaaacagtaatcaaagctgacctggaaaaggcactcaccaaggagctcaagaagaagaagaaggctaatcccaagataattgcagaactgcttatcatgtacctcttcaatgcattcctcttcagcaggacatctacaacattaacatgtgacctcatcaacgcttgtgaagacctagacaacataaacagcttcaattgggcaaatatgaagctccaccagaatccagactggctggaggaattaataaaagaaggtccgtggttagaacataacttcatcaagttgttggatatcgaagaggagcaagaaacaccaagttttgcaaactggattccacaagcaagtcaggaagagaaagaagagaacattagggtcactgggaacatgagagttctcctaaaggagatgaatactgagattgaagacaaaggtgacaaaaagaaaatggagactatcttacaagcaaatgataatttggcaaaccatattaaggtgccatgggaaaagattatggttgccgatgacaagattttgtctatggagaagaaagtgactgaagtgatgcaagaaaacagagcgcacaaaaactacatcagagctctaaacaaattgttggcaaaggcaaatgggaggaaacctgatcaagaaagtagtgatcagagatctaagcaacttcagatggtgctggcgtcaacggagccagaagatggaacaggatataaaaatgatcagacccaagctgaatatcaacctcaaacaccagtcaacgaagaaccaaggggaggtgatccagttgacgcagttcctctagctttcaagaaactagaagaggaaaaaaatgagcaagcaggtgaggaggagatactaagttctgtagaagcagaaaaaataaatataattgtctcgacaattcttgaagacatgaaagagaagaaagctggaaaaaaagtagcagtaccatctgtcctaatacaaaaggaaaaggttgccatgcattctatcgagaggaacgtgaaacaaaacaagagaaaggcaacaactaaggacaatgatgaggattttgagtatgatactctggagatcttgaagacttacggaaagaaaagaaagactactccacaagaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

400

Amino Acids

45.79

Weight (kDa)

5.29

Isoelectric Point (pI)

48.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 914
AatII GACGTC 1 cut(s) 60
Acc36I ACCTGC 1 cut(s) 914
AccB1I GGYRCC 1 cut(s) 568
AccB7I CCANNNNNTGG 1 cut(s) 782
AclWI GGATC 2 cut(s) 13, 857
AcuI CTGAAG 3 cut(s) 178, 651, 734
AcyI GRCGYC 2 cut(s) 57, 764
AfaI GTAC 2 cut(s) 173, 1032
AfiI CCNNNNNNNGG 4 cut(s) 100, 565, 782, 857
AflIII ACRYGT 1 cut(s) 218
AgsI TTSAA 6 cut(s) 181, 268, 497, 892, 992, 1162
AjnI CCWGG 1 cut(s) 93
AluBI AGCT 8 cut(s) 89, 118, 264, 286, 674, 815, 887, 1013
AluI AGCT 8 cut(s) 89, 118, 264, 286, 674, 815, 887, 1013
Alw21I GWGCWC 3 cut(s) 25, 120, 676
Alw26I GTCTC 2 cut(s) 518, 982
AlwI GGATC 2 cut(s) 13, 857
AseI ATTAAT 1 cut(s) 317
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 1 cut(s) 329
AsuHPI GGTGA 4 cut(s) 100, 518, 872, 938
AvaII GGWCC 1 cut(s) 329
BanI GGYRCC 1 cut(s) 568
BanII GRGCYC 2 cut(s) 120, 676
BbsI GAAGAC 4 cut(s) 249, 504, 999, 1169
Bbv12I GWGCWC 3 cut(s) 25, 120, 676
BccI CCATC 3 cut(s) 748, 776, 1042
BciT130I CCWGG 1 cut(s) 95
BclI TGATCA 3 cut(s) 715, 730, 802
BcoDI GTCTC 2 cut(s) 518, 982
BfaI CTAG 3 cut(s) 248, 884, 899
BfmI CTRYAG 1 cut(s) 948
BfuAI ACCTGC 1 cut(s) 914
BglII AGATCT 2 cut(s) 737, 1155
Bme1390I CCNGG 1 cut(s) 95
Bme18I GGWCC 1 cut(s) 329
BmgT120I GGNCC 1 cut(s) 329
BmiI GGNNCC 2 cut(s) 570, 774
BmrFI CCNGG 1 cut(s) 95
BmrI ACTGGG 1 cut(s) 462
BmsI GCATC 2 cut(s) 51, 627
BmuI ACTGGG 1 cut(s) 462
BpiI GAAGAC 4 cut(s) 249, 504, 999, 1169
BpmI CTGGAG 2 cut(s) 329, 1172
BpuEI CTTGAG 2 cut(s) 9, 104
BsaHI GRCGYC 2 cut(s) 57, 764
BsaJI CCNNGG 4 cut(s) 111, 332, 572, 851
Bsc4I CCNNNNNNNGG 4 cut(s) 100, 565, 782, 857
Bse1I ACTGG 5 cut(s) 308, 407, 457, 836, 866
BseBI CCWGG 1 cut(s) 95
BseDI CCNNGG 4 cut(s) 111, 332, 572, 851
BseLI CCNNNNNNNGG 4 cut(s) 100, 565, 782, 857
BseMII CTCAG 2 cut(s) 23, 480
BseNI ACTGG 5 cut(s) 308, 407, 457, 836, 866
BseRI GAGGAG 3 cut(s) 389, 944, 947
BshNI GGYRCC 1 cut(s) 568
BsiHKAI GWGCWC 3 cut(s) 25, 120, 676
BslI CCNNNNNNNGG 4 cut(s) 100, 565, 782, 857
BsmAI GTCTC 2 cut(s) 518, 982
BsmI GAATGC 2 cut(s) 185, 1069
Bsp1286I GDGCHC 3 cut(s) 25, 120, 676
Bsp143I GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
Bsp19I CCATGG 1 cut(s) 572
BspCNI CTCAG 2 cut(s) 22, 481
BspLI GGNNCC 2 cut(s) 570, 774
BspMI ACCTGC 1 cut(s) 914
BspPI GGATC 2 cut(s) 13, 857
BspT107I GGYRCC 1 cut(s) 568
BsrI ACTGG 5 cut(s) 308, 407, 457, 836, 866
BssECI CCNNGG 4 cut(s) 111, 332, 572, 851
BssMI GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
BssNI GRCGYC 2 cut(s) 57, 764
BssT1I CCWWGG 3 cut(s) 111, 572, 851
Bst2UI CCWGG 1 cut(s) 95
Bst4CI ACNGT 1 cut(s) 79
Bst6I CTCTTC 6 cut(s) 182, 197, 366, 420, 429, 897
BstACI GRCGYC 2 cut(s) 57, 764
BstC8I GCNNGC 2 cut(s) 762, 921
BstDEI CTNAG 5 cut(s) 9, 489, 741, 941, 1116
BstDSI CCRYGG 2 cut(s) 332, 572
BstENI CCTNNNNNAGG 1 cut(s) 98
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 7 cut(s) 8, 718, 733, 740, 805, 865, 1158
BstMAI GTCTC 2 cut(s) 518, 982
BstMBI GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
BstNI CCWGG 1 cut(s) 95
BstNSI RCATGY 1 cut(s) 222
BstSCI CCNGG 1 cut(s) 93
BstSFI CTRYAG 1 cut(s) 948
BstV2I GAAGAC 4 cut(s) 249, 504, 999, 1169
BstX2I RGATCY 3 cut(s) 5, 737, 1155
BstYI RGATCY 3 cut(s) 5, 737, 1155
BtgI CCRYGG 2 cut(s) 332, 572
BtsIMutI CAGTG 1 cut(s) 450
BveI ACCTGC 1 cut(s) 914
Cac8I GCNNGC 2 cut(s) 762, 921
CfoI GCGC 1 cut(s) 655
Cfr13I GGNCC 1 cut(s) 329
CseI GACGC 2 cut(s) 753, 881
Csp6I GTAC 2 cut(s) 172, 1031
CviAII CATG 6 cut(s) 169, 219, 460, 573, 997, 1066
CviQI GTAC 2 cut(s) 172, 1031
DdeI CTNAG 5 cut(s) 9, 489, 741, 941, 1116
DpnI GATC 7 cut(s) 7, 717, 732, 739, 804, 864, 1157
DpnII GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
Eam1104I CTCTTC 6 cut(s) 182, 197, 366, 420, 429, 897
EarI CTCTTC 6 cut(s) 182, 197, 366, 420, 429, 897
Ecl136II GAGCTC 2 cut(s) 118, 674
Eco130I CCWWGG 3 cut(s) 111, 572, 851
Eco24I GRGCYC 2 cut(s) 120, 676
Eco32I GATATC 1 cut(s) 367
Eco47I GGWCC 1 cut(s) 329
Eco53kI GAGCTC 2 cut(s) 118, 674
Eco57I CTGAAG 3 cut(s) 178, 651, 734
EcoICRI GAGCTC 2 cut(s) 118, 674
EcoNI CCTNNNNNAGG 1 cut(s) 98
EcoRII CCWGG 1 cut(s) 93
EcoRV GATATC 1 cut(s) 367
EcoT14I CCWWGG 3 cut(s) 111, 572, 851
EcoT22I ATGCAT 2 cut(s) 187, 1071
EcoT38I GRGCYC 2 cut(s) 120, 676
ErhI CCWWGG 3 cut(s) 111, 572, 851
FaeI CATG 6 cut(s) 172, 222, 463, 576, 1000, 1069
FatI CATG 6 cut(s) 168, 218, 459, 572, 996, 1065
FbaI TGATCA 3 cut(s) 715, 730, 802
FriOI GRGCYC 2 cut(s) 120, 676
FspBI CTAG 3 cut(s) 248, 884, 899
GlaI GCGC 1 cut(s) 654
GsuI CTGGAG 2 cut(s) 329, 1172
HgaI GACGC 2 cut(s) 753, 881
HhaI GCGC 1 cut(s) 655
Hin1I GRCGYC 2 cut(s) 57, 764
Hin1II CATG 6 cut(s) 172, 222, 463, 576, 1000, 1069
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HincII GTYRAC 3 cut(s) 768, 841, 871
HindII GTYRAC 3 cut(s) 768, 841, 871
HinfI GANTC 2 cut(s) 295, 406
HphI GGTGA 4 cut(s) 100, 518, 872, 938
Hpy166II GTNNAC 3 cut(s) 768, 841, 871
Hpy188I TCNGA 4 cut(s) 671, 735, 753, 807
Hpy8I GTNNAC 3 cut(s) 768, 841, 871
HpyAV CCTTC 4 cut(s) 11, 32, 127, 320
HpyCH4III ACNGT 1 cut(s) 79
HpyCH4IV ACGT 2 cut(s) 57, 1086
HpyCH4V TGCA 5 cut(s) 155, 185, 398, 640, 1069
HpyF3I CTNAG 5 cut(s) 9, 489, 741, 941, 1116
HpySE526I ACGT 2 cut(s) 57, 1086
Hsp92I GRCGYC 2 cut(s) 57, 764
Hsp92II CATG 6 cut(s) 172, 222, 463, 576, 1000, 1069
HspAI GCGC 1 cut(s) 653
Ksp22I TGATCA 3 cut(s) 715, 730, 802
Kzo9I GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
LmnI GCTCC 4 cut(s) 115, 291, 376, 772
LweI GCATC 2 cut(s) 51, 627
MaeI CTAG 3 cut(s) 248, 884, 899
MaeII ACGT 2 cut(s) 57, 1086
MaeIII GTNAC 4 cut(s) 221, 448, 506, 625
MalI GATC 7 cut(s) 7, 717, 732, 739, 804, 864, 1157
MboI GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
MfeI CAATTG 1 cut(s) 268
MflI RGATCY 3 cut(s) 5, 737, 1155
MhlI GDGCHC 3 cut(s) 25, 120, 676
MluCI AATT 7 cut(s) 150, 268, 314, 547, 683, 972, 984
MmeI TCCRAC 1 cut(s) 342
Mph1103I ATGCAT 2 cut(s) 187, 1071
MseI TTAA 3 cut(s) 215, 317, 564
MslI CAYNNNNRTG 1 cut(s) 217
MspR9I CCNGG 1 cut(s) 95
MunI CAATTG 1 cut(s) 268
Mva1269I GAATGC 2 cut(s) 185, 1069
MvaI CCWGG 1 cut(s) 95
NcoI CCATGG 1 cut(s) 572
NdeII GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
NlaIII CATG 6 cut(s) 172, 222, 463, 576, 1000, 1069
NlaIV GGNNCC 2 cut(s) 570, 774
NmuCI GTSAC 4 cut(s) 221, 448, 506, 625
NsiI ATGCAT 2 cut(s) 187, 1071
NspI RCATGY 1 cut(s) 222
PaqCI CACCTGC 1 cut(s) 914
PciI ACATGT 1 cut(s) 218
PcsI WCGNNNNNNNCGW 1 cut(s) 1083
PctI GAATGC 2 cut(s) 185, 1069
PfeI GAWTC 2 cut(s) 295, 406
PflMI CCANNNNNTGG 1 cut(s) 782
PscI ACATGT 1 cut(s) 218
PshBI ATTAAT 1 cut(s) 317
Psp124BI GAGCTC 2 cut(s) 120, 676
Psp6I CCWGG 1 cut(s) 93
PspGI CCWGG 1 cut(s) 93
PspN4I GGNNCC 2 cut(s) 570, 774
PspPI GGNCC 1 cut(s) 329
PsuI RGATCY 3 cut(s) 5, 737, 1155
RsaI GTAC 2 cut(s) 173, 1032
RsaNI GTAC 2 cut(s) 172, 1031
RseI CAYNNNNRTG 1 cut(s) 217
SacI GAGCTC 2 cut(s) 120, 676
SaqAI TTAA 3 cut(s) 215, 317, 564
Sau3AI GATC 7 cut(s) 5, 715, 730, 737, 802, 862, 1155
Sau96I GGNCC 1 cut(s) 329
ScrFI CCNGG 1 cut(s) 95
SduI GDGCHC 3 cut(s) 25, 120, 676
SfaNI GCATC 2 cut(s) 51, 627
SfcI CTRYAG 1 cut(s) 948
SinI GGWCC 1 cut(s) 329
SmiMI CAYNNNNRTG 1 cut(s) 217
SmlI CTYRAG 2 cut(s) 24, 119
SmoI CTYRAG 2 cut(s) 24, 119
Sse9I AATT 7 cut(s) 150, 268, 314, 547, 683, 972, 984
SspMI CTAG 3 cut(s) 248, 884, 899
SstI GAGCTC 2 cut(s) 120, 676
StyD4I CCNGG 1 cut(s) 93
StyI CCWWGG 3 cut(s) 111, 572, 851
TaaI ACNGT 1 cut(s) 79
TaiI ACGT 2 cut(s) 60, 1089
TaqI TCGA 3 cut(s) 369, 980, 1077
TasI AATT 7 cut(s) 150, 268, 314, 547, 683, 972, 984
TfiI GAWTC 2 cut(s) 295, 406
Tru1I TTAA 3 cut(s) 215, 317, 564
Tru9I TTAA 3 cut(s) 215, 317, 564
TscAI CASTG 1 cut(s) 457
TseFI GTSAC 4 cut(s) 221, 448, 506, 625
Tsp45I GTSAC 4 cut(s) 221, 448, 506, 625
TspDTI ATGAA 4 cut(s) 296, 340, 497, 1013
TspGWI ACGGA 4 cut(s) 50, 321, 785, 1185
TspRI CASTG 1 cut(s) 457
Van91I CCANNNNNTGG 1 cut(s) 782
VpaK11BI GGWCC 1 cut(s) 329
VspI ATTAAT 1 cut(s) 317
XagI CCTNNNNNAGG 1 cut(s) 98
XceI RCATGY 1 cut(s) 222
XspI CTAG 3 cut(s) 248, 884, 899
ZraI GACGTC 1 cut(s) 58
Zsp2I ATGCAT 2 cut(s) 187, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.