FvH4_5g24921

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000060
Physical Location & Seq
Forward (+)
16392265 .. 16395874
3610 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g24921.t1

Sequence Viewer

Length: 1665 bp
ATGTATAGATACAAGAAGAGCATCCTAGAAGAATCATGGGAGTTGATAAACAATACTTGTTTTCGGGGAATAATTGAAGCATTCAGATCGGGCAAGATTGATGAGGATCAAGTGAAGAAGCTTGAATCTGATTTTGAGATCTTAATGAGGCACTACAATAGTGACAATAAAAACTTTATATTTGGGATCAAGGAGATTGAAATTACGAAGCATGACGTACATTCAATTTTTGGAATAACCAAAGAAAGCTCAGATGTGGATATCACAATAGAGCAGAAATACTGCAAGGGCAATAAGAAAAGCACAGATTCTGCTGTTTTTAGAAAGCAAACGAGAAGAACGATCACCAGAAAGGTTATTGATGACACATTAATGGAAGTGCTGAGGAAGATTCAGAAGAAGAAAGGGGATCCGAGGAAGATAGCCTCTTTGGTTATAATGTACGTTATGTCAGCTTTATTTTTCAGCAGAAGCGGGAACCACATTGAATGGAAACTGATACTCAAGTGTGAAGACCTTGAAGGCATCGACAAATACAACTGGTCACATAAGGTATTACAATTCTTGCACCAAGGACTTCACAAGCACGTAAAAGGGGAGCCAAAAGTTTTGAACGGAGGCCTCTTTCTGGTTCTATACTGGTTCCTTGAGAAAACAAAAATAAAGAAGCGGATTCTCAAGAAAGAGAAGGAGACTCCCAGATTTATAAGATGGTCAATACAAGAGATCATTAAAGAAAAGGAGTATTTGAGAAGACCTGAATTGCTAGAGGAGGAAACGAGTTCCGGCAATGATGTGCGGCATCAAGATATGGAACACCAAGCTTCATTGATTGGAGACAACATGGAAGATCATAGCTACAGAAAGGAGCAACCAGGAACTGAAGAGTTTTTTGAACAAGCAGAACCAGTTCCATTGTCAGCTATATTTCCAGAAGACGATGAACCTGTGAAGCTGTACAAGCGTGGGGCAGAAAAGAGGGAAGAAGAATGGGAATATGACACCCCTGAAGGGCTAAAGCCAGCAAAAAGAATAAAGAAGGAGGAGCAGAAAGTCAAAAATAGTATTGTTATTGATGGAGTGAACTGCAACACTGATACATGGAAGCTCTTAGATGAAAAAGTGGCGAATCACTATAAGAACTGGTTTGATTTGAACAAGGACAAGAATGATGATTTCCGGTATTGGGAGTGTTGTAATGGTATCATTGCCATTACCAAAGACGACTTGAAGAGAATAATTCAAGAAGGAGAGATTACATCTAATGTGAAGCACATTATGGTGTTTGTCAAACGCGTATATGATTCCACCATATACCCTCTCAGCCAAGGCTTGAACCGTGATGAATGGAGGGAAAACTATGGCAAGCAGGACAGCCAAGGAATAGAGGTTGACGGTTACTCGATGATGAGTGCTGAAGAGAAAAGAACAAGAAGATGGATGCTGGACCAAAGCGTTTATCAAGCAAGATACCAGCTAATTGATGTCTTATCCTGCCCGCAGCAAAAGTGTTTATCGTCAGACTGTGGACCATTTTTGCTCCATTTCATAGAGAGCCTATGTCATGCGAAAAAACCGACAGAAGATGGTGGTAATGAAATGAGGAAGAAGATGCTGCTAAAGTTCATGGACATCAATATAGAAAAAAGATTAGTGCCACTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

555

Amino Acids

65.51

Weight (kDa)

7.88

Isoelectric Point (pI)

52.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 50 - 242 1.3e-09 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 437, 707
AccII CGCG 1 cut(s) 1296
AciI CCGC 4 cut(s) 474, 670, 799, 1499
AclWI GGATC 4 cut(s) 114, 194, 404, 417
AcuI CTGAAG 3 cut(s) 903, 1029, 1437
AfaI GTAC 3 cut(s) 219, 443, 959
AfiI CCNNNNNNNGG 3 cut(s) 628, 1011, 1186
AflIII ACRYGT 1 cut(s) 1294
AjnI CCWGG 1 cut(s) 874
AluBI AGCT 9 cut(s) 121, 249, 455, 824, 858, 923, 955, 1108, 1477
AluI AGCT 9 cut(s) 121, 249, 455, 824, 858, 923, 955, 1108, 1477
Alw26I GTCTC 2 cut(s) 686, 831
AlwI GGATC 4 cut(s) 114, 194, 404, 417
AlwNI CAGNNNCTG 2 cut(s) 311, 881
AoxI GGCC 1 cut(s) 619
ApeKI GCWGC 2 cut(s) 1501, 1615
AseI ATTAAT 1 cut(s) 371
Asp700I GAANNNNTTC 1 cut(s) 909
AspS9I GGNCC 2 cut(s) 1447, 1529
AsuHPI GGTGA 1 cut(s) 337
AvaII GGWCC 2 cut(s) 1447, 1529
BaeI ACNNNNGTAYC 2 cut(s) 491, 524
BamHI GGATCC 1 cut(s) 409
BbsI GAAGAC 3 cut(s) 519, 760, 942
BbvCI CCTCAGC 1 cut(s) 383
BbvI GCAGC 2 cut(s) 1513, 1602
BccI CCATC 4 cut(s) 705, 1070, 1431, 1580
BcgI CGANNNNNNTGC 2 cut(s) 69, 103
BciT130I CCWGG 1 cut(s) 876
BcoDI GTCTC 2 cut(s) 686, 831
BfaI CTAG 2 cut(s) 26, 767
BfmI CTRYAG 1 cut(s) 859
BglII AGATCT 1 cut(s) 138
BisI GCNGC 3 cut(s) 800, 1502, 1616
BlsI GCNGC 3 cut(s) 801, 1503, 1617
Bme1390I CCNGG 1 cut(s) 876
Bme18I GGWCC 2 cut(s) 1447, 1529
BmgT120I GGNCC 2 cut(s) 1447, 1529
BmiI GGNNCC 4 cut(s) 411, 479, 600, 644
BmrFI CCNGG 1 cut(s) 876
BmsI GCATC 5 cut(s) 30, 534, 811, 1431, 1602
BpiI GAAGAC 3 cut(s) 519, 760, 942
Bpu10I CCTNAGC 1 cut(s) 383
BpuEI CTTGAG 3 cut(s) 488, 662, 668
BsaAI YACGTR 1 cut(s) 589
BsaBI GATNNNNATC 1 cut(s) 105
BsaJI CCNNGG 4 cut(s) 413, 571, 1327, 1378
BsaWI WCCGGW 1 cut(s) 1179
Bsc4I CCNNNNNNNGG 3 cut(s) 628, 1011, 1186
Bse1I ACTGG 4 cut(s) 545, 644, 908, 1148
Bse3DI GCAATG 2 cut(s) 796, 1206
Bse8I GATNNNNATC 1 cut(s) 105
BseBI CCWGG 1 cut(s) 876
BseDI CCNNGG 4 cut(s) 413, 571, 1327, 1378
BseGI GGATG 2 cut(s) 21, 1446
BseJI GATNNNNATC 1 cut(s) 105
BseLI CCNNNNNNNGG 3 cut(s) 628, 1011, 1186
BseMI GCAATG 2 cut(s) 796, 1206
BseMII CTCAG 3 cut(s) 264, 374, 1336
BseNI ACTGG 4 cut(s) 545, 644, 908, 1148
BseRI GAGGAG 2 cut(s) 785, 1058
BseXI GCAGC 2 cut(s) 1513, 1602
Bsh1236I CGCG 1 cut(s) 1296
BshFI GGCC 1 cut(s) 621
BsiSI CCGG 2 cut(s) 786, 1180
BslI CCNNNNNNNGG 3 cut(s) 628, 1011, 1186
BsmAI GTCTC 2 cut(s) 686, 831
BsmI GAATGC 1 cut(s) 80
BsnI GGCC 1 cut(s) 621
Bsp1407I TGTACA 1 cut(s) 957
Bsp143I GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
BspACI CCGC 4 cut(s) 474, 670, 799, 1499
BspANI GGCC 1 cut(s) 621
BspCNI CTCAG 3 cut(s) 263, 375, 1335
BspFNI CGCG 1 cut(s) 1296
BspLI GGNNCC 4 cut(s) 411, 479, 600, 644
BspPI GGATC 4 cut(s) 114, 194, 404, 417
BspQI GCTCTTC 1 cut(s) 11
BsrDI GCAATG 2 cut(s) 796, 1206
BsrGI TGTACA 1 cut(s) 957
BsrI ACTGG 4 cut(s) 545, 644, 908, 1148
BssECI CCNNGG 4 cut(s) 413, 571, 1327, 1378
BssMI GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
BssT1I CCWWGG 3 cut(s) 571, 1327, 1378
Bst2UI CCWGG 1 cut(s) 876
Bst4CI ACNGT 3 cut(s) 1340, 1397, 1526
Bst6I CTCTTC 4 cut(s) 11, 879, 1226, 1413
BstAUI TGTACA 1 cut(s) 957
BstBAI YACGTR 1 cut(s) 589
BstC8I GCNNGC 3 cut(s) 1023, 1367, 1499
BstDEI CTNAG 4 cut(s) 250, 383, 1111, 1322
BstF5I GGATG 2 cut(s) 21, 1446
BstFNI CGCG 1 cut(s) 1296
BstKTI GATC 8 cut(s) 89, 109, 141, 189, 345, 412, 729, 853
BstMAI GTCTC 2 cut(s) 686, 831
BstMBI GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
BstMWI GCNNNNNNNGC 1 cut(s) 961
BstNI CCWGG 1 cut(s) 876
BstSCI CCNGG 1 cut(s) 874
BstSFI CTRYAG 1 cut(s) 859
BstUI CGCG 1 cut(s) 1296
BstV1I GCAGC 2 cut(s) 1513, 1602
BstV2I GAAGAC 3 cut(s) 519, 760, 942
BstX2I RGATCY 2 cut(s) 138, 409
BstYI RGATCY 2 cut(s) 138, 409
BsuRI GGCC 1 cut(s) 621
BtsCI GGATG 2 cut(s) 21, 1446
BtsIMutI CAGTG 1 cut(s) 1092
Cac8I GCNNGC 3 cut(s) 1023, 1367, 1499
CaiI CAGNNNCTG 2 cut(s) 311, 881
Cfr13I GGNCC 2 cut(s) 1447, 1529
Csp6I GTAC 3 cut(s) 218, 442, 958
CviAII CATG 6 cut(s) 36, 212, 844, 1101, 1565, 1627
CviQI GTAC 3 cut(s) 218, 442, 958
DdeI CTNAG 4 cut(s) 250, 383, 1111, 1322
DpnI GATC 8 cut(s) 88, 108, 140, 188, 344, 411, 728, 852
DpnII GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
Eam1104I CTCTTC 4 cut(s) 11, 879, 1226, 1413
EarI CTCTTC 4 cut(s) 11, 879, 1226, 1413
Eco130I CCWWGG 3 cut(s) 571, 1327, 1378
Eco147I AGGCCT 1 cut(s) 621
Eco32I GATATC 1 cut(s) 262
Eco47I GGWCC 2 cut(s) 1447, 1529
Eco57I CTGAAG 3 cut(s) 903, 1029, 1437
EcoRII CCWGG 1 cut(s) 874
EcoRV GATATC 1 cut(s) 262
EcoT14I CCWWGG 3 cut(s) 571, 1327, 1378
ErhI CCWWGG 3 cut(s) 571, 1327, 1378
FaeI CATG 6 cut(s) 39, 215, 847, 1104, 1568, 1630
FatI CATG 6 cut(s) 35, 211, 843, 1100, 1564, 1626
FauI CCCGC 2 cut(s) 467, 1506
Fnu4HI GCNGC 3 cut(s) 800, 1502, 1616
FokI GGATG 2 cut(s) 8, 1453
Fsp4HI GCNGC 3 cut(s) 800, 1502, 1616
FspBI CTAG 2 cut(s) 26, 767
GluI GCNGC 3 cut(s) 800, 1502, 1616
HaeIII GGCC 1 cut(s) 621
HapII CCGG 2 cut(s) 786, 1180
Hin1II CATG 6 cut(s) 39, 215, 847, 1104, 1568, 1630
HincII GTYRAC 1 cut(s) 1393
HindII GTYRAC 1 cut(s) 1393
HindIII AAGCTT 2 cut(s) 119, 822
HinfI GANTC 8 cut(s) 32, 125, 308, 391, 673, 694, 1129, 1304
HpaII CCGG 2 cut(s) 786, 1180
HphI GGTGA 1 cut(s) 337
Hpy166II GTNNAC 3 cut(s) 1084, 1393, 1529
Hpy188I TCNGA 6 cut(s) 86, 130, 253, 396, 414, 1522
Hpy188III TCNNGA 4 cut(s) 679, 806, 932, 1244
Hpy8I GTNNAC 3 cut(s) 1084, 1393, 1529
HpyAV CCTTC 5 cut(s) 515, 682, 1004, 1033, 1241
HpyCH4III ACNGT 3 cut(s) 1340, 1397, 1526
HpyCH4IV ACGT 3 cut(s) 216, 444, 588
HpyCH4V TGCA 3 cut(s) 285, 568, 1089
HpyF10VI GCNNNNNNNGC 1 cut(s) 961
HpyF3I CTNAG 4 cut(s) 250, 383, 1111, 1322
HpySE526I ACGT 3 cut(s) 216, 444, 588
Hsp92II CATG 6 cut(s) 39, 215, 847, 1104, 1568, 1630
Kzo9I GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
LguI GCTCTTC 1 cut(s) 11
LmnI GCTCC 4 cut(s) 598, 868, 1045, 1545
Lsp1109I GCAGC 2 cut(s) 1513, 1602
LweI GCATC 5 cut(s) 30, 534, 811, 1431, 1602
MaeI CTAG 2 cut(s) 26, 767
MaeII ACGT 3 cut(s) 216, 444, 588
MaeIII GTNAC 3 cut(s) 161, 543, 1397
MalI GATC 8 cut(s) 88, 108, 140, 188, 344, 411, 728, 852
MboI GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
MflI RGATCY 2 cut(s) 138, 409
MluCI AATT 7 cut(s) 72, 201, 225, 560, 761, 1239, 1479
MluI ACGCGT 1 cut(s) 1294
MlyI GAGTC 1 cut(s) 688
MroXI GAANNNNTTC 1 cut(s) 909
MseI TTAA 3 cut(s) 143, 371, 732
MslI CAYNNNNRTG 2 cut(s) 371, 1280
MspI CCGG 2 cut(s) 786, 1180
MspR9I CCNGG 1 cut(s) 876
Mva1269I GAATGC 1 cut(s) 80
MvaI CCWGG 1 cut(s) 876
MvnI CGCG 1 cut(s) 1296
MwoI GCNNNNNNNGC 1 cut(s) 961
NdeII GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
NlaIII CATG 6 cut(s) 39, 215, 847, 1104, 1568, 1630
NlaIV GGNNCC 4 cut(s) 411, 479, 600, 644
NmuCI GTSAC 2 cut(s) 161, 543
PceI AGGCCT 1 cut(s) 621
PciSI GCTCTTC 1 cut(s) 11
PcsI WCGNNNNNNNCGW 1 cut(s) 338
PctI GAATGC 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 909
PfeI GAWTC 7 cut(s) 32, 125, 308, 391, 673, 1129, 1304
PkrI GCNGC 3 cut(s) 801, 1503, 1617
PleI GAGTC 1 cut(s) 688
PpsI GAGTC 1 cut(s) 688
Ppu21I YACGTR 1 cut(s) 589
PshBI ATTAAT 1 cut(s) 371
PsiI TTATAA 2 cut(s) 437, 707
Psp6I CCWGG 1 cut(s) 874
PspGI CCWGG 1 cut(s) 874
PspN4I GGNNCC 4 cut(s) 411, 479, 600, 644
PspPI GGNCC 2 cut(s) 1447, 1529
PstNI CAGNNNCTG 2 cut(s) 311, 881
PsuI RGATCY 2 cut(s) 138, 409
RsaI GTAC 3 cut(s) 219, 443, 959
RsaNI GTAC 3 cut(s) 218, 442, 958
RseI CAYNNNNRTG 2 cut(s) 371, 1280
SapI GCTCTTC 1 cut(s) 11
SaqAI TTAA 3 cut(s) 143, 371, 732
SatI GCNGC 3 cut(s) 800, 1502, 1616
Sau3AI GATC 8 cut(s) 86, 106, 138, 186, 342, 409, 726, 850
Sau96I GGNCC 2 cut(s) 1447, 1529
SchI GAGTC 1 cut(s) 688
ScrFI CCNGG 1 cut(s) 876
SfaNI GCATC 5 cut(s) 30, 534, 811, 1431, 1602
SfcI CTRYAG 1 cut(s) 859
SinI GGWCC 2 cut(s) 1447, 1529
SmiMI CAYNNNNRTG 2 cut(s) 371, 1280
SmlI CTYRAG 3 cut(s) 503, 647, 677
SmoI CTYRAG 3 cut(s) 503, 647, 677
Sse9I AATT 7 cut(s) 72, 201, 225, 560, 761, 1239, 1479
SseBI AGGCCT 1 cut(s) 621
SsiI CCGC 4 cut(s) 474, 670, 799, 1499
SspMI CTAG 2 cut(s) 26, 767
StuI AGGCCT 1 cut(s) 621
StyD4I CCNGG 1 cut(s) 874
StyI CCWWGG 3 cut(s) 571, 1327, 1378
TaaI ACNGT 3 cut(s) 1340, 1397, 1526
TaiI ACGT 3 cut(s) 219, 447, 591
TaqI TCGA 2 cut(s) 528, 1403
TasI AATT 7 cut(s) 72, 201, 225, 560, 761, 1239, 1479
TatI WGTACW 1 cut(s) 957
TauI GCSGC 1 cut(s) 802
TfiI GAWTC 7 cut(s) 32, 125, 308, 391, 673, 1129, 1304
Tru1I TTAA 3 cut(s) 143, 371, 732
Tru9I TTAA 3 cut(s) 143, 371, 732
TscAI CASTG 1 cut(s) 1099
TseFI GTSAC 2 cut(s) 161, 543
TseI GCWGC 2 cut(s) 1501, 1615
Tsp45I GTSAC 2 cut(s) 161, 543
TspDTI ATGAA 7 cut(s) 816, 957, 1131, 1359, 1537, 1611, 1615
TspGWI ACGGA 1 cut(s) 630
TspRI CASTG 1 cut(s) 1099
VpaK11BI GGWCC 2 cut(s) 1447, 1529
VspI ATTAAT 1 cut(s) 371
XmnI GAANNNNTTC 1 cut(s) 909
XspI CTAG 2 cut(s) 26, 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.