Rmu_sc0003368.1_g000056

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003368.1
OG0000060
Physical Location & Seq
Forward (+)
307782 .. 309029
1248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003368.1_g000056.1.cds

Sequence Viewer

Length: 1248 bp
atgggtagaccaaaattcacattgatgagtgactcagaggaagatgaccggaattcacagagttccgataactatgctgagaccacgtttaaccaaacactgcaaaaaaagtttgtcgaaatcagaaagaggaagcgacaacaggcagcacatatttctgacgaaggatctgctgaagaagaagtaaatgaagattcaggacgatcgtctgaagaagaatcagaatccgagggtgaactgacaacgaaaaggtttgtaatcaaaacaagacaacaaccaaaaaggaaacaacttcaagaggaggtggatacagaagaagaaaaaccaaagaagaaagccaagaagaaaatgaaaagggcagttaaaaaagaggagaaaaaagagacacataaagcaaagatcgagtggaagcaacagaagtgcacgctcagtgcattctggaggatggtcaacgcacataaagacagaattccagaccaaacgaaagagattttgatgggtaccaactttggtgaaataatggaacctttctggcaggacaagataacagagatccagctgcacaaacatgaagcggacctggagatactcctaaggcacttcgaccgtacctacaacaagtggaagtttggggatatttttatggaaataacggaggaggatgtcatggctttgtttcacctcccggctgaaggagaagtgttcaatgtgaacaggagggtagtaagggaagagatggaagactctctaatatttggcagccctttaaagacgcaggctgtcctcagaacacgggtggagtcgacactgatagatgagttgacaaagccggcagaagagaaagatgccaggaagatagccgtgctaatgatgacatatttattcagcacattcttcttcaccagaaccggtgctcagatcacatgggatatggtcgcgatatgtgaacggattgagaccattaacatgtacaattggccaagattaattctgaacttcttgatgcgaaccggggctcagatcacatgggatatggtcgcgatatgtgaacggattgagaccataaacatgtacaattggccaagattaattctgaacttcttgatggaagggttacaaaagtataggaggaacagtccatctgttttgaatggatgcattcttctcatctattactggttccttaagaagaccaaggcaaagacttggattcctggaaggcagaatgagactccacgattcatctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

415

Amino Acids

49.27

Weight (kDa)

8.42

Isoelectric Point (pI)

58.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 500
AccB1I GGYRCC 1 cut(s) 500
AccI GTMKAC 2 cut(s) 7, 803
AccII CGCG 2 cut(s) 938, 1040
AciI CCGC 1 cut(s) 575
AclWI GGATC 2 cut(s) 175, 547
AcoI YGGCCR 2 cut(s) 977, 1079
AcsI RAATTY 3 cut(s) 14, 52, 468
AcuI CTGAAG 3 cut(s) 195, 231, 711
AfaI GTAC 4 cut(s) 502, 610, 971, 1073
AfiI CCNNNNNNNGG 1 cut(s) 692
AflII CTTAAG 1 cut(s) 1184
AflIII ACRYGT 2 cut(s) 966, 1068
AgeI ACCGGT 1 cut(s) 908
AgsI TTSAA 3 cut(s) 296, 706, 1150
AjnI CCWGG 3 cut(s) 579, 848, 1213
AluBI AGCT 1 cut(s) 559
AluI AGCT 1 cut(s) 559
Alw21I GWGCWC 2 cut(s) 425, 916
Alw26I GTCTC 5 cut(s) 74, 377, 950, 1052, 1223
Alw44I GTGCAC 1 cut(s) 421
AlwI GGATC 2 cut(s) 175, 547
AoxI GGCC 2 cut(s) 977, 1079
ApaLI GTGCAC 1 cut(s) 421
ApeKI GCWGC 3 cut(s) 146, 559, 759
ApoI RAATTY 3 cut(s) 14, 52, 468
AseI ATTAAT 2 cut(s) 986, 1088
AsiGI ACCGGT 1 cut(s) 908
Asp718I GGTACC 1 cut(s) 500
AspS9I GGNCC 1 cut(s) 577
AsuC2I CCSGG 2 cut(s) 686, 1012
AsuHPI GGTGA 4 cut(s) 245, 524, 671, 892
AvaII GGWCC 1 cut(s) 577
AxyI CCTNAGG 1 cut(s) 593
BaeGI GKGCMC 1 cut(s) 425
BalI TGGCCA 2 cut(s) 979, 1081
BanI GGYRCC 1 cut(s) 500
BanII GRGCYC 1 cut(s) 1018
BbsI GAAGAC 2 cut(s) 747, 1196
Bbv12I GWGCWC 2 cut(s) 425, 916
BbvI GCAGC 3 cut(s) 158, 546, 771
BccI CCATC 5 cut(s) 439, 490, 730, 1099, 1147
BceAI ACGGC 1 cut(s) 845
BcgI CGANNNNNNTGC 4 cut(s) 56, 90, 152, 186
BciT130I CCWGG 3 cut(s) 581, 850, 1215
BciVI GTATCC 1 cut(s) 301
BcnI CCSGG 2 cut(s) 686, 1012
BcoDI GTCTC 5 cut(s) 74, 377, 950, 1052, 1223
BfrI CTTAAG 1 cut(s) 1184
BfuI GTATCC 1 cut(s) 301
BisI GCNGC 3 cut(s) 147, 560, 760
BlsI GCNGC 3 cut(s) 148, 561, 761
Bme1390I CCNGG 5 cut(s) 581, 686, 850, 1012, 1215
Bme18I GGWCC 1 cut(s) 577
BmgT120I GGNCC 1 cut(s) 577
BmiI GGNNCC 3 cut(s) 502, 525, 1181
BmrFI CCNGG 5 cut(s) 581, 686, 850, 1012, 1215
BmsI GCATC 3 cut(s) 835, 993, 1145
BoxI GACNNNNGTC 1 cut(s) 205
BpiI GAAGAC 2 cut(s) 747, 1196
BpmI CTGGAG 2 cut(s) 460, 602
BpuMI CCSGG 2 cut(s) 686, 1012
BsaI GGTCTC 3 cut(s) 74, 950, 1052
BsaJI CCNNGG 3 cut(s) 228, 1011, 1194
BsaWI WCCGGW 2 cut(s) 48, 908
BsaXI ACNNNNNCTCC 2 cut(s) 1120, 1150
Bsc4I CCNNNNNNNGG 1 cut(s) 692
Bse118I RCCGGY 2 cut(s) 829, 908
Bse1I ACTGG 1 cut(s) 1181
Bse21I CCTNAGG 1 cut(s) 593
BseBI CCWGG 3 cut(s) 581, 850, 1215
BseDI CCNNGG 3 cut(s) 228, 1011, 1194
BseGI GGATG 3 cut(s) 450, 667, 1160
BseLI CCNNNNNNNGG 1 cut(s) 692
BseMII CTCAG 6 cut(s) 48, 69, 442, 799, 929, 1031
BseNI ACTGG 1 cut(s) 1181
BseRI GAGGAG 3 cut(s) 314, 386, 671
BseSI GKGCMC 1 cut(s) 425
BseXI GCAGC 3 cut(s) 158, 546, 771
BsgI GTGCAG 1 cut(s) 545
Bsh1236I CGCG 2 cut(s) 938, 1040
Bsh1285I CGRYCG 2 cut(s) 206, 607
BshFI GGCC 2 cut(s) 979, 1081
BshNI GGYRCC 1 cut(s) 500
BshTI ACCGGT 1 cut(s) 908
BsiEI CGRYCG 2 cut(s) 206, 607
BsiHKAI GWGCWC 2 cut(s) 425, 916
BsiSI CCGG 5 cut(s) 49, 686, 830, 909, 1011
BslI CCNNNNNNNGG 1 cut(s) 692
BsmAI GTCTC 5 cut(s) 74, 377, 950, 1052, 1223
BsmI GAATGC 2 cut(s) 434, 1158
BsnI GGCC 2 cut(s) 979, 1081
Bso31I GGTCTC 3 cut(s) 74, 950, 1052
Bsp1286I GDGCHC 3 cut(s) 425, 916, 1018
Bsp1407I TGTACA 2 cut(s) 969, 1071
Bsp143I GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
Bsp68I TCGCGA 2 cut(s) 938, 1040
BspACI CCGC 1 cut(s) 575
BspANI GGCC 2 cut(s) 979, 1081
BspCNI CTCAG 6 cut(s) 47, 70, 441, 798, 928, 1030
BspFNI CGCG 2 cut(s) 938, 1040
BspLI GGNNCC 3 cut(s) 502, 525, 1181
BspPI GGATC 2 cut(s) 175, 547
BspT107I GGYRCC 1 cut(s) 500
BspTI CTTAAG 1 cut(s) 1184
BspTNI GGTCTC 3 cut(s) 74, 950, 1052
BsrFI RCCGGY 2 cut(s) 829, 908
BsrGI TGTACA 2 cut(s) 969, 1071
BsrI ACTGG 1 cut(s) 1181
BssAI RCCGGY 2 cut(s) 829, 908
BssECI CCNNGG 3 cut(s) 228, 1011, 1194
BssMI GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
BssT1I CCWWGG 1 cut(s) 1194
Bst2UI CCWGG 3 cut(s) 581, 850, 1215
Bst4CI ACNGT 2 cut(s) 608, 1136
Bst6I CTCTTC 2 cut(s) 726, 831
BstAFI CTTAAG 1 cut(s) 1184
BstAUI TGTACA 2 cut(s) 969, 1071
BstC8I GCNNGC 3 cut(s) 425, 777, 831
BstDEI CTNAG 7 cut(s) 34, 78, 428, 593, 785, 915, 1017
BstF5I GGATG 3 cut(s) 450, 667, 1160
BstFNI CGCG 2 cut(s) 938, 1040
BstKTI GATC 6 cut(s) 170, 206, 402, 555, 921, 1023
BstMAI GTCTC 5 cut(s) 74, 377, 950, 1052, 1223
BstMBI GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
BstMCI CGRYCG 2 cut(s) 206, 607
BstNI CCWGG 3 cut(s) 581, 850, 1215
BstNSI RCATGY 2 cut(s) 970, 1072
BstPAI GACNNNNGTC 1 cut(s) 205
BstSCI CCNGG 5 cut(s) 579, 684, 848, 1010, 1213
BstSLI GKGCMC 1 cut(s) 425
BstUI CGCG 2 cut(s) 938, 1040
BstV1I GCAGC 3 cut(s) 158, 546, 771
BstV2I GAAGAC 2 cut(s) 747, 1196
BstX2I RGATCY 2 cut(s) 167, 552
BstYI RGATCY 2 cut(s) 167, 552
Bsu36I CCTNAGG 1 cut(s) 593
BsuI GTATCC 1 cut(s) 301
BsuRI GGCC 2 cut(s) 979, 1081
BtsCI GGATG 3 cut(s) 450, 667, 1160
BtsI GCAGTG 1 cut(s) 98
BtsIMutI CAGTG 3 cut(s) 98, 436, 806
BtuMI TCGCGA 2 cut(s) 938, 1040
Cac8I GCNNGC 3 cut(s) 425, 777, 831
Cfr10I RCCGGY 2 cut(s) 829, 908
Cfr13I GGNCC 1 cut(s) 577
CseI GACGC 1 cut(s) 781
Csp6I GTAC 4 cut(s) 501, 609, 970, 1072
CspAI ACCGGT 1 cut(s) 908
CviAII CATG 6 cut(s) 569, 667, 924, 967, 1026, 1069
CviQI GTAC 4 cut(s) 501, 609, 970, 1072
DdeI CTNAG 7 cut(s) 34, 78, 428, 593, 785, 915, 1017
DpnI GATC 6 cut(s) 169, 205, 401, 554, 920, 1022
DpnII GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
DraI TTTAAA 1 cut(s) 768
EaeI YGGCCR 2 cut(s) 977, 1079
Eam1104I CTCTTC 2 cut(s) 726, 831
EarI CTCTTC 2 cut(s) 726, 831
Eco130I CCWWGG 1 cut(s) 1194
Eco24I GRGCYC 1 cut(s) 1018
Eco31I GGTCTC 3 cut(s) 74, 950, 1052
Eco47I GGWCC 1 cut(s) 577
Eco57I CTGAAG 3 cut(s) 195, 231, 711
Eco81I CCTNAGG 1 cut(s) 593
EcoRI GAATTC 2 cut(s) 52, 468
EcoRII CCWGG 3 cut(s) 579, 848, 1213
EcoT14I CCWWGG 1 cut(s) 1194
EcoT22I ATGCAT 1 cut(s) 1160
EcoT38I GRGCYC 1 cut(s) 1018
ErhI CCWWGG 1 cut(s) 1194
FaeI CATG 6 cut(s) 572, 670, 927, 970, 1029, 1072
FatI CATG 6 cut(s) 568, 666, 923, 966, 1025, 1068
FblI GTMKAC 2 cut(s) 7, 803
Fnu4HI GCNGC 3 cut(s) 147, 560, 760
FokI GGATG 3 cut(s) 457, 674, 1167
FriOI GRGCYC 1 cut(s) 1018
Fsp4HI GCNGC 3 cut(s) 147, 560, 760
GluI GCNGC 3 cut(s) 147, 560, 760
GsuI CTGGAG 2 cut(s) 460, 602
HaeIII GGCC 2 cut(s) 979, 1081
HapII CCGG 5 cut(s) 49, 686, 830, 909, 1011
HgaI GACGC 1 cut(s) 781
Hin1II CATG 6 cut(s) 572, 670, 927, 970, 1029, 1072
HincII GTYRAC 3 cut(s) 451, 804, 822
HindII GTYRAC 3 cut(s) 451, 804, 822
HinfI GANTC 9 cut(s) 32, 194, 218, 224, 743, 800, 1210, 1231, 1239
HpaII CCGG 5 cut(s) 49, 686, 830, 909, 1011
HphI GGTGA 4 cut(s) 245, 524, 671, 892
Hpy166II GTNNAC 9 cut(s) 8, 236, 423, 451, 712, 804, 822, 947, 1049
Hpy188III TCNNGA 8 cut(s) 198, 296, 439, 473, 937, 1000, 1039, 1102
Hpy8I GTNNAC 9 cut(s) 8, 236, 423, 451, 712, 804, 822, 947, 1049
HpyAV CCTTC 4 cut(s) 158, 686, 1103, 1212
HpyCH4III ACNGT 2 cut(s) 608, 1136
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 5 cut(s) 103, 423, 434, 562, 1158
HpyF3I CTNAG 7 cut(s) 34, 78, 428, 593, 785, 915, 1017
HpySE526I ACGT 1 cut(s) 86
Hsp92II CATG 6 cut(s) 572, 670, 927, 970, 1029, 1072
KpnI GGTACC 1 cut(s) 504
KroI GCCGGC 1 cut(s) 829
KroNI GCCGGC 1 cut(s) 831
Kzo9I GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
Lsp1109I GCAGC 3 cut(s) 158, 546, 771
LweI GCATC 3 cut(s) 835, 993, 1145
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 2 cut(s) 29, 1113
MalI GATC 6 cut(s) 169, 205, 401, 554, 920, 1022
MboI GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
MfeI CAATTG 2 cut(s) 973, 1075
MflI RGATCY 2 cut(s) 167, 552
MhlI GDGCHC 3 cut(s) 425, 916, 1018
MlsI TGGCCA 2 cut(s) 979, 1081
MluCI AATT 7 cut(s) 14, 52, 468, 973, 987, 1075, 1089
MluNI TGGCCA 2 cut(s) 979, 1081
MlyI GAGTC 4 cut(s) 26, 737, 809, 1225
Mox20I TGGCCA 2 cut(s) 979, 1081
Mph1103I ATGCAT 1 cut(s) 1160
MroNI GCCGGC 1 cut(s) 829
MscI TGGCCA 2 cut(s) 979, 1081
MseI TTAA 7 cut(s) 90, 363, 767, 963, 986, 1088, 1185
MslI CAYNNNNRTG 4 cut(s) 23, 567, 965, 1067
Msp20I TGGCCA 2 cut(s) 979, 1081
MspA1I CMGCKG 1 cut(s) 559
MspCI CTTAAG 1 cut(s) 1184
MspI CCGG 5 cut(s) 49, 686, 830, 909, 1011
MspR9I CCNGG 5 cut(s) 581, 686, 850, 1012, 1215
MunI CAATTG 2 cut(s) 973, 1075
Mva1269I GAATGC 2 cut(s) 434, 1158
MvaI CCWGG 3 cut(s) 581, 850, 1215
MvnI CGCG 2 cut(s) 938, 1040
NaeI GCCGGC 1 cut(s) 831
NciI CCSGG 2 cut(s) 686, 1012
NdeII GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
NgoMIV GCCGGC 1 cut(s) 829
NlaIII CATG 6 cut(s) 572, 670, 927, 970, 1029, 1072
NlaIV GGNNCC 3 cut(s) 502, 525, 1181
NmuCI GTSAC 1 cut(s) 29
NruI TCGCGA 2 cut(s) 938, 1040
NsiI ATGCAT 1 cut(s) 1160
NspI RCATGY 2 cut(s) 970, 1072
PciI ACATGT 2 cut(s) 966, 1068
PctI GAATGC 2 cut(s) 434, 1158
PdiI GCCGGC 1 cut(s) 831
PfeI GAWTC 5 cut(s) 194, 218, 224, 1210, 1239
PfoI TCCNGGA 1 cut(s) 1213
PinAI ACCGGT 1 cut(s) 908
PkrI GCNGC 3 cut(s) 148, 561, 761
Ple19I CGATCG 1 cut(s) 206
PleI GAGTC 4 cut(s) 26, 737, 808, 1225
PpsI GAGTC 4 cut(s) 26, 737, 808, 1225
PscI ACATGT 2 cut(s) 966, 1068
PshAI GACNNNNGTC 1 cut(s) 205
PshBI ATTAAT 2 cut(s) 986, 1088
Psp6I CCWGG 3 cut(s) 579, 848, 1213
PspGI CCWGG 3 cut(s) 579, 848, 1213
PspN4I GGNNCC 3 cut(s) 502, 525, 1181
PspPI GGNCC 1 cut(s) 577
PsuI RGATCY 2 cut(s) 167, 552
PvuI CGATCG 1 cut(s) 206
PvuII CAGCTG 1 cut(s) 559
RruI TCGCGA 2 cut(s) 938, 1040
RsaI GTAC 4 cut(s) 502, 610, 971, 1073
RsaNI GTAC 4 cut(s) 501, 609, 970, 1072
RseI CAYNNNNRTG 4 cut(s) 23, 567, 965, 1067
SalI GTCGAC 1 cut(s) 802
SaqAI TTAA 7 cut(s) 90, 363, 767, 963, 986, 1088, 1185
SatI GCNGC 3 cut(s) 147, 560, 760
Sau3AI GATC 6 cut(s) 167, 203, 399, 552, 918, 1020
Sau96I GGNCC 1 cut(s) 577
SchI GAGTC 4 cut(s) 26, 737, 809, 1225
ScrFI CCNGG 5 cut(s) 581, 686, 850, 1012, 1215
SduI GDGCHC 3 cut(s) 425, 916, 1018
SetI ASST 8 cut(s) 89, 254, 306, 529, 561, 582, 614, 684
SfaNI GCATC 3 cut(s) 835, 993, 1145
SinI GGWCC 1 cut(s) 577
SmiMI CAYNNNNRTG 4 cut(s) 23, 567, 965, 1067
SmlI CTYRAG 1 cut(s) 1184
SmoI CTYRAG 1 cut(s) 1184
Sse9I AATT 7 cut(s) 14, 52, 468, 973, 987, 1075, 1089
SsiI CCGC 1 cut(s) 575
SspI AATATT 1 cut(s) 753
StyD4I CCNGG 5 cut(s) 579, 684, 848, 1010, 1213
StyI CCWWGG 1 cut(s) 1194
TaaI ACNGT 2 cut(s) 608, 1136
TaiI ACGT 1 cut(s) 89
TaqI TCGA 4 cut(s) 117, 402, 603, 803
TasI AATT 7 cut(s) 14, 52, 468, 973, 987, 1075, 1089
TatI WGTACW 2 cut(s) 969, 1071
TfiI GAWTC 5 cut(s) 194, 218, 224, 1210, 1239
Tru1I TTAA 7 cut(s) 90, 363, 767, 963, 986, 1088, 1185
Tru9I TTAA 7 cut(s) 90, 363, 767, 963, 986, 1088, 1185
TscAI CASTG 3 cut(s) 105, 436, 813
TseFI GTSAC 1 cut(s) 29
TseI GCWGC 3 cut(s) 146, 559, 759
Tsp45I GTSAC 1 cut(s) 29
TspDTI ATGAA 4 cut(s) 204, 365, 585, 1231
TspGWI ACGGA 3 cut(s) 668, 964, 1066
TspRI CASTG 3 cut(s) 105, 436, 813
Vha464I CTTAAG 1 cut(s) 1184
VneI GTGCAC 1 cut(s) 421
VpaK11BI GGWCC 1 cut(s) 577
VspI ATTAAT 2 cut(s) 986, 1088
XapI RAATTY 3 cut(s) 14, 52, 468
XceI RCATGY 2 cut(s) 970, 1072
XmiI GTMKAC 2 cut(s) 7, 803
Zsp2I ATGCAT 1 cut(s) 1160
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.