No description available
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 96 - 144 | 4.9e-08 | PPR repeat family |
| PPR | PF01535 | 99 - 129 | 6.6e-06 | PPR repeat |
| PPR_2 | PF13041 | 198 - 244 | 4e-11 | PPR repeat family |
| PPR | PF01535 | 200 - 230 | 2.5e-08 | PPR repeat |
| PPR | PF01535 | 301 - 330 | 2.1e-06 | PPR repeat |
| PPR_2 | PF13041 | 329 - 376 | 4.9e-11 | PPR repeat family |
| PPR | PF01535 | 332 - 361 | 1.7e-09 | PPR repeat |
| PPR_2 | PF13041 | 430 - 479 | 3e-12 | PPR repeat family |
| PPR | PF01535 | 433 - 463 | 7.8e-06 | PPR repeat |
| E_motif | PF20431 | 548 - 609 | 1.2e-13 | E motif |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1796 |
| AatII | GACGTC | 1 cut(s) | 914 |
| Acc16I | TGCGCA | 1 cut(s) | 957 |
| AccB1I | GGYRCC | 2 cut(s) | 1087, 1319 |
| AccI | GTMKAC | 1 cut(s) | 1224 |
| AciI | CCGC | 4 cut(s) | 37, 112, 178, 1950 |
| AclWI | GGATC | 2 cut(s) | 1062, 1351 |
| AcsI | RAATTY | 6 cut(s) | 93, 293, 376, 607, 1003, 1850 |
| AcuI | CTGAAG | 1 cut(s) | 1946 |
| AcyI | GRCGYC | 2 cut(s) | 237, 911 |
| AdeI | CACNNNGTG | 1 cut(s) | 265 |
| AfaI | GTAC | 2 cut(s) | 5, 302 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1042 |
| AflII | CTTAAG | 1 cut(s) | 419 |
| AflIII | ACRYGT | 1 cut(s) | 1227 |
| AgsI | TTSAA | 5 cut(s) | 85, 346, 950, 1829, 1884 |
| AjiI | CACGTC | 1 cut(s) | 1547 |
| AluBI | AGCT | 9 cut(s) | 211, 484, 653, 1049, 1666, 1681, 1745, 1814, 1821 |
| AluI | AGCT | 9 cut(s) | 211, 484, 653, 1049, 1666, 1681, 1745, 1814, 1821 |
| Alw21I | GWGCWC | 2 cut(s) | 1515, 1823 |
| Alw26I | GTCTC | 3 cut(s) | 235, 237, 1935 |
| AlwI | GGATC | 2 cut(s) | 1062, 1351 |
| AoxI | GGCC | 1 cut(s) | 1033 |
| ApoI | RAATTY | 6 cut(s) | 93, 293, 376, 607, 1003, 1850 |
| AseI | ATTAAT | 1 cut(s) | 525 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 398 |
| AspLEI | GCGC | 3 cut(s) | 431, 945, 958 |
| AsuC2I | CCSGG | 2 cut(s) | 382, 562 |
| AsuHPI | GGTGA | 8 cut(s) | 64, 89, 175, 190, 251, 1094, 1396, 1751 |
| BaeGI | GKGCMC | 2 cut(s) | 562, 1324 |
| BanI | GGYRCC | 2 cut(s) | 1087, 1319 |
| BanII | GRGCYC | 1 cut(s) | 1823 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1472, 1504 |
| BbsI | GAAGAC | 1 cut(s) | 1436 |
| Bbv12I | GWGCWC | 2 cut(s) | 1515, 1823 |
| BccI | CCATC | 6 cut(s) | 288, 787, 862, 910, 1746, 1829 |
| BceAI | ACGGC | 1 cut(s) | 394 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1533, 1567 |
| BclI | TGATCA | 2 cut(s) | 802, 970 |
| BcnI | CCSGG | 2 cut(s) | 382, 562 |
| BcoDI | GTCTC | 3 cut(s) | 235, 237, 1935 |
| BfaI | CTAG | 2 cut(s) | 933, 1448 |
| BfmI | CTRYAG | 3 cut(s) | 1126, 1260, 1973 |
| BfrI | CTTAAG | 1 cut(s) | 419 |
| BglII | AGATCT | 1 cut(s) | 1264 |
| Bme1390I | CCNGG | 2 cut(s) | 382, 562 |
| BmgBI | CACGTC | 1 cut(s) | 1547 |
| BmiI | GGNNCC | 3 cut(s) | 1089, 1321, 1695 |
| BmrFI | CCNGG | 2 cut(s) | 382, 562 |
| BmsI | GCATC | 6 cut(s) | 28, 778, 966, 1269, 1362, 1647 |
| BpiI | GAAGAC | 1 cut(s) | 1436 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 113, 145, 805, 837 |
| BpmI | CTGGAG | 1 cut(s) | 651 |
| BpuMI | CCSGG | 2 cut(s) | 382, 562 |
| BsaAI | YACGTR | 1 cut(s) | 1717 |
| BsaHI | GRCGYC | 2 cut(s) | 237, 911 |
| BsaI | GGTCTC | 1 cut(s) | 237 |
| BsaJI | CCNNGG | 3 cut(s) | 202, 1104, 1642 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1042 |
| Bse3DI | GCAATG | 5 cut(s) | 131, 340, 404, 1328, 1959 |
| BseDI | CCNNGG | 3 cut(s) | 202, 1104, 1642 |
| BseGI | GGATG | 4 cut(s) | 19, 168, 798, 1638 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1042 |
| BseMI | GCAATG | 5 cut(s) | 131, 340, 404, 1328, 1959 |
| BseMII | CTCAG | 3 cut(s) | 576, 878, 1134 |
| BseRI | GAGGAG | 1 cut(s) | 121 |
| BseSI | GKGCMC | 2 cut(s) | 562, 1324 |
| BseYI | CCCAGC | 1 cut(s) | 1537 |
| BsgI | GTGCAG | 1 cut(s) | 92 |
| Bsh1285I | CGRYCG | 1 cut(s) | 27 |
| BshFI | GGCC | 1 cut(s) | 1035 |
| BshNI | GGYRCC | 2 cut(s) | 1087, 1319 |
| BsiEI | CGRYCG | 1 cut(s) | 27 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1515, 1823 |
| BsiSI | CCGG | 4 cut(s) | 240, 381, 432, 562 |
| BslFI | GGGAC | 1 cut(s) | 1554 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1042 |
| BsmAI | GTCTC | 3 cut(s) | 235, 237, 1935 |
| BsmBI | CGTCTC | 1 cut(s) | 235 |
| BsmFI | GGGAC | 1 cut(s) | 1554 |
| BsmI | GAATGC | 1 cut(s) | 1590 |
| BsnI | GGCC | 1 cut(s) | 1035 |
| Bso31I | GGTCTC | 1 cut(s) | 237 |
| Bsp1286I | GDGCHC | 4 cut(s) | 562, 1324, 1515, 1823 |
| Bsp1407I | TGTACA | 1 cut(s) | 300 |
| Bsp19I | CCATGG | 1 cut(s) | 1642 |
| BspACI | CCGC | 4 cut(s) | 37, 112, 178, 1950 |
| BspANI | GGCC | 1 cut(s) | 1035 |
| BspCNI | CTCAG | 3 cut(s) | 577, 877, 1133 |
| BspLI | GGNNCC | 3 cut(s) | 1089, 1321, 1695 |
| BspPI | GGATC | 2 cut(s) | 1062, 1351 |
| BspT107I | GGYRCC | 2 cut(s) | 1087, 1319 |
| BspTI | CTTAAG | 1 cut(s) | 419 |
| BspTNI | GGTCTC | 1 cut(s) | 237 |
| BsrDI | GCAATG | 5 cut(s) | 131, 340, 404, 1328, 1959 |
| BsrGI | TGTACA | 1 cut(s) | 300 |
| BssECI | CCNNGG | 3 cut(s) | 202, 1104, 1642 |
| BssNI | GRCGYC | 2 cut(s) | 237, 911 |
| BssT1I | CCWWGG | 2 cut(s) | 1104, 1642 |
| Bst4CI | ACNGT | 7 cut(s) | 28, 470, 1201, 1337, 1439, 1793, 1974 |
| Bst6I | CTCTTC | 1 cut(s) | 1064 |
| BstACI | GRCGYC | 2 cut(s) | 237, 911 |
| BstAFI | CTTAAG | 1 cut(s) | 419 |
| BstAUI | TGTACA | 1 cut(s) | 300 |
| BstBAI | YACGTR | 1 cut(s) | 1717 |
| BstC8I | GCNNGC | 3 cut(s) | 387, 509, 1522 |
| BstDEI | CTNAG | 4 cut(s) | 585, 864, 1120, 1555 |
| BstDSI | CCRYGG | 1 cut(s) | 1642 |
| BstF5I | GGATG | 4 cut(s) | 19, 168, 798, 1638 |
| BstHHI | GCGC | 3 cut(s) | 431, 945, 958 |
| BstMAI | GTCTC | 3 cut(s) | 235, 237, 1935 |
| BstMCI | CGRYCG | 1 cut(s) | 27 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 517, 1121, 1594, 1644, 1717 |
| BstNSI | RCATGY | 2 cut(s) | 1231, 1877 |
| BstSCI | CCNGG | 2 cut(s) | 380, 560 |
| BstSFI | CTRYAG | 3 cut(s) | 1126, 1260, 1973 |
| BstSLI | GKGCMC | 2 cut(s) | 562, 1324 |
| BstV2I | GAAGAC | 1 cut(s) | 1436 |
| BstX2I | RGATCY | 2 cut(s) | 1054, 1264 |
| BstYI | RGATCY | 2 cut(s) | 1054, 1264 |
| BsuRI | GGCC | 1 cut(s) | 1035 |
| BtgI | CCRYGG | 1 cut(s) | 1642 |
| BtrI | CACGTC | 1 cut(s) | 1547 |
| BtsCI | GGATG | 4 cut(s) | 19, 168, 798, 1638 |
| BtsIMutI | CAGTG | 4 cut(s) | 980, 1197, 1444, 1571 |
| Cac8I | GCNNGC | 3 cut(s) | 387, 509, 1522 |
| CfoI | GCGC | 3 cut(s) | 431, 945, 958 |
| CseI | GACGC | 1 cut(s) | 245 |
| Csp6I | GTAC | 2 cut(s) | 4, 301 |
| CviAII | CATG | 9 cut(s) | 136, 938, 1228, 1302, 1525, 1643, 1700, 1874, 1900 |
| CviQI | GTAC | 2 cut(s) | 4, 301 |
| DdeI | CTNAG | 4 cut(s) | 585, 864, 1120, 1555 |
| DraIII | CACNNNGTG | 1 cut(s) | 265 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1796 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1796 |
| Eam1104I | CTCTTC | 1 cut(s) | 1064 |
| EarI | CTCTTC | 1 cut(s) | 1064 |
| Ecl136II | GAGCTC | 1 cut(s) | 1821 |
| Eco130I | CCWWGG | 2 cut(s) | 1104, 1642 |
| Eco24I | GRGCYC | 1 cut(s) | 1823 |
| Eco31I | GGTCTC | 1 cut(s) | 237 |
| Eco32I | GATATC | 1 cut(s) | 764 |
| Eco53kI | GAGCTC | 1 cut(s) | 1821 |
| Eco57I | CTGAAG | 1 cut(s) | 1946 |
| EcoICRI | GAGCTC | 1 cut(s) | 1821 |
| EcoRI | GAATTC | 2 cut(s) | 607, 1003 |
| EcoRV | GATATC | 1 cut(s) | 764 |
| EcoT14I | CCWWGG | 2 cut(s) | 1104, 1642 |
| EcoT38I | GRGCYC | 1 cut(s) | 1823 |
| ErhI | CCWWGG | 2 cut(s) | 1104, 1642 |
| Esp3I | CGTCTC | 1 cut(s) | 235 |
| FaeI | CATG | 9 cut(s) | 139, 941, 1231, 1305, 1528, 1646, 1703, 1877, 1903 |
| FaqI | GGGAC | 1 cut(s) | 1554 |
| FatI | CATG | 9 cut(s) | 135, 937, 1227, 1301, 1524, 1642, 1699, 1873, 1899 |
| FauI | CCCGC | 1 cut(s) | 44 |
| FbaI | TGATCA | 2 cut(s) | 802, 970 |
| FblI | GTMKAC | 1 cut(s) | 1224 |
| FokI | GGATG | 4 cut(s) | 6, 155, 805, 1625 |
| FriOI | GRGCYC | 1 cut(s) | 1823 |
| FspBI | CTAG | 2 cut(s) | 933, 1448 |
| FspI | TGCGCA | 1 cut(s) | 957 |
| GlaI | GCGC | 3 cut(s) | 430, 944, 957 |
| GsaI | CCCAGC | 1 cut(s) | 1541 |
| GsuI | CTGGAG | 1 cut(s) | 651 |
| HaeIII | GGCC | 1 cut(s) | 1035 |
| HapII | CCGG | 4 cut(s) | 240, 381, 432, 562 |
| HgaI | GACGC | 1 cut(s) | 245 |
| HhaI | GCGC | 3 cut(s) | 431, 945, 958 |
| Hin1I | GRCGYC | 2 cut(s) | 237, 911 |
| Hin1II | CATG | 9 cut(s) | 139, 941, 1231, 1305, 1528, 1646, 1703, 1877, 1903 |
| Hin6I | GCGC | 3 cut(s) | 429, 943, 956 |
| HinP1I | GCGC | 3 cut(s) | 429, 943, 956 |
| HindIII | AAGCTT | 2 cut(s) | 482, 651 |
| HinfI | GANTC | 4 cut(s) | 338, 1386, 1494, 1797 |
| HpaII | CCGG | 4 cut(s) | 240, 381, 432, 562 |
| HphI | GGTGA | 8 cut(s) | 64, 89, 175, 190, 251, 1094, 1396, 1751 |
| Hpy166II | GTNNAC | 5 cut(s) | 402, 466, 705, 734, 1225 |
| Hpy188III | TCNNGA | 8 cut(s) | 85, 1052, 1063, 1394, 1448, 1502, 1765, 1774 |
| Hpy8I | GTNNAC | 5 cut(s) | 402, 466, 705, 734, 1225 |
| Hpy99I | CGWCG | 3 cut(s) | 239, 916, 1548 |
| HpyAV | CCTTC | 7 cut(s) | 229, 446, 640, 867, 1025, 1373, 1417 |
| HpyCH4III | ACNGT | 7 cut(s) | 28, 470, 1201, 1337, 1439, 1793, 1974 |
| HpyCH4IV | ACGT | 4 cut(s) | 911, 1546, 1650, 1716 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 517, 1121, 1594, 1644, 1717 |
| HpyF3I | CTNAG | 4 cut(s) | 585, 864, 1120, 1555 |
| HpySE526I | ACGT | 4 cut(s) | 911, 1546, 1650, 1716 |
| Hsp92I | GRCGYC | 2 cut(s) | 237, 911 |
| Hsp92II | CATG | 9 cut(s) | 139, 941, 1231, 1305, 1528, 1646, 1703, 1877, 1903 |
| HspAI | GCGC | 3 cut(s) | 429, 943, 956 |
| Ksp22I | TGATCA | 2 cut(s) | 802, 970 |
| LmnI | GCTCC | 4 cut(s) | 134, 230, 1693, 1826 |
| LweI | GCATC | 6 cut(s) | 28, 778, 966, 1269, 1362, 1647 |
| MaeI | CTAG | 2 cut(s) | 933, 1448 |
| MaeII | ACGT | 4 cut(s) | 911, 1546, 1650, 1716 |
| MaeIII | GTNAC | 6 cut(s) | 70, 138, 251, 887, 1201, 1433 |
| MboII | GAAGA | 4 cut(s) | 1051, 1436, 1571, 1769 |
| MfeI | CAATTG | 1 cut(s) | 1910 |
| MflI | RGATCY | 2 cut(s) | 1054, 1264 |
| MhlI | GDGCHC | 4 cut(s) | 562, 1324, 1515, 1823 |
| MlyI | GAGTC | 3 cut(s) | 332, 1488, 1806 |
| MmeI | TCCRAC | 5 cut(s) | 47, 258, 1231, 1665, 1671 |
| MroXI | GAANNNNTTC | 1 cut(s) | 398 |
| MseI | TTAA | 4 cut(s) | 420, 480, 525, 714 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1338 |
| MspA1I | CMGCKG | 1 cut(s) | 1681 |
| MspCI | CTTAAG | 1 cut(s) | 419 |
| MspI | CCGG | 4 cut(s) | 240, 381, 432, 562 |
| MspR9I | CCNGG | 2 cut(s) | 382, 562 |
| MunI | CAATTG | 1 cut(s) | 1910 |
| Mva1269I | GAATGC | 1 cut(s) | 1590 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 517, 1121, 1594, 1644, 1717 |
| NciI | CCSGG | 2 cut(s) | 382, 562 |
| NcoI | CCATGG | 1 cut(s) | 1642 |
| NlaIII | CATG | 9 cut(s) | 139, 941, 1231, 1305, 1528, 1646, 1703, 1877, 1903 |
| NlaIV | GGNNCC | 3 cut(s) | 1089, 1321, 1695 |
| NmuCI | GTSAC | 3 cut(s) | 70, 138, 1433 |
| NsbI | TGCGCA | 1 cut(s) | 957 |
| NspI | RCATGY | 2 cut(s) | 1231, 1877 |
| PciI | ACATGT | 1 cut(s) | 1227 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 608 |
| PctI | GAATGC | 1 cut(s) | 1590 |
| PdmI | GAANNNNTTC | 1 cut(s) | 398 |
| PfeI | GAWTC | 1 cut(s) | 1386 |
| PflFI | GACNNNGTC | 1 cut(s) | 275 |
| PleI | GAGTC | 3 cut(s) | 332, 1488, 1805 |
| PpsI | GAGTC | 3 cut(s) | 332, 1488, 1805 |
| Ppu21I | YACGTR | 1 cut(s) | 1717 |
| PscI | ACATGT | 1 cut(s) | 1227 |
| PshBI | ATTAAT | 1 cut(s) | 525 |
| Psp124BI | GAGCTC | 1 cut(s) | 1823 |
| PspFI | CCCAGC | 1 cut(s) | 1537 |
| PspN4I | GGNNCC | 3 cut(s) | 1089, 1321, 1695 |
| PsuI | RGATCY | 2 cut(s) | 1054, 1264 |
| PsyI | GACNNNGTC | 1 cut(s) | 275 |
| PvuII | CAGCTG | 1 cut(s) | 1681 |
| RsaI | GTAC | 2 cut(s) | 5, 302 |
| RsaNI | GTAC | 2 cut(s) | 4, 301 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1338 |
| SacI | GAGCTC | 1 cut(s) | 1823 |
| SaqAI | TTAA | 4 cut(s) | 420, 480, 525, 714 |
| SchI | GAGTC | 3 cut(s) | 332, 1488, 1806 |
| ScrFI | CCNGG | 2 cut(s) | 382, 562 |
| SduI | GDGCHC | 4 cut(s) | 562, 1324, 1515, 1823 |
| SfaNI | GCATC | 6 cut(s) | 28, 778, 966, 1269, 1362, 1647 |
| SfcI | CTRYAG | 3 cut(s) | 1126, 1260, 1973 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1338 |
| SmlI | CTYRAG | 2 cut(s) | 14, 419 |
| SmoI | CTYRAG | 2 cut(s) | 14, 419 |
| SsiI | CCGC | 4 cut(s) | 37, 112, 178, 1950 |
| SspMI | CTAG | 2 cut(s) | 933, 1448 |
| SstI | GAGCTC | 1 cut(s) | 1823 |
| StyD4I | CCNGG | 2 cut(s) | 380, 560 |
| StyI | CCWWGG | 2 cut(s) | 1104, 1642 |
| TaaI | ACNGT | 7 cut(s) | 28, 470, 1201, 1337, 1439, 1793, 1974 |
| TaiI | ACGT | 4 cut(s) | 914, 1549, 1653, 1719 |
| TaqI | TCGA | 4 cut(s) | 611, 876, 914, 1905 |
| TatI | WGTACW | 2 cut(s) | 3, 300 |
| TfiI | GAWTC | 1 cut(s) | 1386 |
| Tru1I | TTAA | 4 cut(s) | 420, 480, 525, 714 |
| Tru9I | TTAA | 4 cut(s) | 420, 480, 525, 714 |
| TscAI | CASTG | 4 cut(s) | 987, 1204, 1444, 1578 |
| TseFI | GTSAC | 3 cut(s) | 70, 138, 1433 |
| Tsp45I | GTSAC | 3 cut(s) | 70, 138, 1433 |
| TspDTI | ATGAA | 5 cut(s) | 591, 1399, 1493, 1607, 1863 |
| TspGWI | ACGGA | 2 cut(s) | 217, 239 |
| TspRI | CASTG | 4 cut(s) | 987, 1204, 1444, 1578 |
| Tth111I | GACNNNGTC | 1 cut(s) | 275 |
| Vha464I | CTTAAG | 1 cut(s) | 419 |
| VspI | ATTAAT | 1 cut(s) | 525 |
| XapI | RAATTY | 6 cut(s) | 93, 293, 376, 607, 1003, 1850 |
| XbaI | TCTAGA | 1 cut(s) | 1447 |
| XceI | RCATGY | 2 cut(s) | 1231, 1877 |
| XmiI | GTMKAC | 1 cut(s) | 1224 |
| XmnI | GAANNNNTTC | 1 cut(s) | 398 |
| XspI | CTAG | 2 cut(s) | 933, 1448 |
| ZraI | GACGTC | 1 cut(s) | 912 |