Rmu_sc0002965.1_g000011

Plant mobile domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002965.1
OG0000060
Physical Location & Seq
Reverse (-)
45682 .. 47099
1418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002965.1_g000011.1.cds

Sequence Viewer

Length: 1149 bp
atgggtagaccaaaattcacattgatgagtgactcaaaagaagatgaccggagttcacagagtttcgataactgtactgagaccacgtttaaccaaccactgcaaaaaaagtttgatgaaatcagaaagaggaagcgacaacaggcagcacagatttctgatgaagaatctgctgaagaagaagtaaatgaagattcaggacgatcgaaacaacttcaagaggaagtggatacagaagaagaaaaaccaaagaggaagaaagccaagaagcaaacgaaaagggcagtgaaaaaagaggagaaaaaagagacacagaaagcaaagattaagtggaagcaacagaagtgcacgctcagtgcattctggaggatgctgcacaaacatgaagcggacctggagatactcctgaggcacttcgaccgcacagacaacaagtggaagttcggggatattgttatggaaataacggaggaggatgtcaccgctttatttcacctcccggctgaaggagaagtgttcaatgtgaacaggagggtggtaagggaagagatggaagactctccaatattgggcagccctttaaagacgcaggctgtcctcagaacaagggtggagtcgacactgataactgagttgacaaagccggcagaagagaaagatgccaggaagatagccgtgctaatgatcacatatctattcagcacattattcttcacccgaaccggtgctcagatcacatgggatatggtcgcgatatgtgaacggattgagaccataaaaatgtacaactggccaagattaattctgaacttcttgatggaagggttacaaaagtataggaggaacagtccatctattttgaatggatgccttcttctcatctattgctggttcctcgagaagaccaaggcaaagacctggattcctagaaagcagaatgagactccacgattcatccgatggtcaataaaggaaatttttagcctggagcagatgtacatgaacgagaacttagccgtggatctgataaaagctggaccacggcctacaaaaattagactggaagacctcgagctgggtgatgaggtgcaggacacaccaagctttgacaactgggtgagtggcgcaactgagcttttctgctgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1985 PMD

Protein Analysis

382

Amino Acids

44.98

Weight (kDa)

8.03

Isoelectric Point (pI)

60.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 7, 617
AccII CGCG 1 cut(s) 752
AciI CCGC 3 cut(s) 389, 421, 483
AclWI GGATC 1 cut(s) 1029
AcoI YGGCCR 1 cut(s) 791
AcsI RAATTY 2 cut(s) 14, 975
AcuI CTGAAG 2 cut(s) 195, 525
AfaI GTAC 3 cut(s) 76, 785, 998
AfiI CCNNNNNNNGG 3 cut(s) 506, 569, 1075
AgeI ACCGGT 1 cut(s) 722
AgsI TTSAA 3 cut(s) 218, 520, 862
AjnI CCWGG 4 cut(s) 393, 662, 917, 984
AluBI AGCT 4 cut(s) 1034, 1075, 1104, 1135
AluI AGCT 4 cut(s) 1034, 1075, 1104, 1135
Alw21I GWGCWC 2 cut(s) 350, 730
Alw26I GTCTC 4 cut(s) 74, 302, 764, 935
Alw44I GTGCAC 1 cut(s) 346
AlwI GGATC 1 cut(s) 1029
Ama87I CYCGRG 2 cut(s) 896, 1070
AoxI GGCC 2 cut(s) 791, 1043
ApaLI GTGCAC 1 cut(s) 346
ApeKI GCWGC 4 cut(s) 146, 373, 573, 1143
ApoI RAATTY 2 cut(s) 14, 975
AseI ATTAAT 1 cut(s) 800
AsiGI ACCGGT 1 cut(s) 722
AspLEI GCGC 1 cut(s) 1127
AspS9I GGNCC 2 cut(s) 391, 1037
AsuC2I CCSGG 1 cut(s) 500
AsuHPI GGTGA 5 cut(s) 472, 485, 706, 1091, 1129
AvaI CYCGRG 2 cut(s) 896, 1070
AvaII GGWCC 2 cut(s) 391, 1037
AxyI CCTNAGG 1 cut(s) 407
BaeGI GKGCMC 1 cut(s) 350
BalI TGGCCA 1 cut(s) 793
BbsI GAAGAC 3 cut(s) 561, 908, 1071
Bbv12I GWGCWC 2 cut(s) 350, 730
BbvI GCAGC 4 cut(s) 158, 360, 585, 1130
BccI CCATC 4 cut(s) 544, 811, 859, 954
BceAI ACGGC 3 cut(s) 659, 1001, 1058
BciT130I CCWGG 4 cut(s) 395, 664, 919, 986
BciVI GTATCC 1 cut(s) 223
BclI TGATCA 1 cut(s) 684
BcnI CCSGG 1 cut(s) 500
BcoDI GTCTC 4 cut(s) 74, 302, 764, 935
BfaI CTAG 2 cut(s) 927, 1147
BfuI GTATCC 1 cut(s) 223
BisI GCNGC 4 cut(s) 147, 374, 574, 1144
BlsI GCNGC 4 cut(s) 148, 375, 575, 1145
Bme1390I CCNGG 5 cut(s) 395, 500, 664, 919, 986
Bme18I GGWCC 2 cut(s) 391, 1037
BmeT110I CYCGRG 2 cut(s) 896, 1070
BmgT120I GGNCC 2 cut(s) 391, 1037
BmiI GGNNCC 1 cut(s) 893
BmrFI CCNGG 5 cut(s) 395, 500, 664, 919, 986
BmrI ACTGGG 1 cut(s) 1123
BmsI GCATC 3 cut(s) 360, 649, 857
BmuI ACTGGG 1 cut(s) 1123
BpiI GAAGAC 3 cut(s) 561, 908, 1071
BpmI CTGGAG 3 cut(s) 385, 416, 1007
BpuMI CCSGG 1 cut(s) 500
BsaI GGTCTC 2 cut(s) 74, 764
BsaJI CCNNGG 3 cut(s) 906, 1017, 1040
BsaWI WCCGGW 2 cut(s) 48, 722
BsaXI ACNNNNNCTCC 4 cut(s) 832, 862, 980, 1010
Bsc4I CCNNNNNNNGG 3 cut(s) 506, 569, 1075
Bse118I RCCGGY 2 cut(s) 643, 722
Bse1I ACTGG 3 cut(s) 794, 1065, 1118
Bse21I CCTNAGG 1 cut(s) 407
BseBI CCWGG 4 cut(s) 395, 664, 919, 986
BseDI CCNNGG 3 cut(s) 906, 1017, 1040
BseGI GGATG 4 cut(s) 375, 481, 872, 954
BseLI CCNNNNNNNGG 3 cut(s) 506, 569, 1075
BseMII CTCAG 7 cut(s) 69, 367, 398, 613, 621, 743, 1122
BseNI ACTGG 3 cut(s) 794, 1065, 1118
BseRI GAGGAG 2 cut(s) 311, 485
BseSI GKGCMC 1 cut(s) 350
BseXI GCAGC 4 cut(s) 158, 360, 585, 1130
BseYI CCCAGC 1 cut(s) 1075
BsgI GTGCAG 2 cut(s) 359, 1109
Bsh1236I CGCG 1 cut(s) 752
Bsh1285I CGRYCG 2 cut(s) 206, 421
BshFI GGCC 2 cut(s) 793, 1045
BshTI ACCGGT 1 cut(s) 722
BsiEI CGRYCG 2 cut(s) 206, 421
BsiHKAI GWGCWC 2 cut(s) 350, 730
BsiHKCI CYCGRG 2 cut(s) 896, 1070
BsiSI CCGG 4 cut(s) 49, 500, 644, 723
BslI CCNNNNNNNGG 3 cut(s) 506, 569, 1075
BsmAI GTCTC 4 cut(s) 74, 302, 764, 935
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 2 cut(s) 793, 1045
Bso31I GGTCTC 2 cut(s) 74, 764
BsoBI CYCGRG 2 cut(s) 896, 1070
Bsp1286I GDGCHC 2 cut(s) 350, 730
Bsp1407I TGTACA 2 cut(s) 783, 996
Bsp143I GATC 4 cut(s) 203, 684, 732, 1021
Bsp68I TCGCGA 1 cut(s) 752
BspACI CCGC 3 cut(s) 389, 421, 483
BspANI GGCC 2 cut(s) 793, 1045
BspCNI CTCAG 7 cut(s) 70, 366, 399, 612, 622, 742, 1123
BspFNI CGCG 1 cut(s) 752
BspLI GGNNCC 1 cut(s) 893
BspPI GGATC 1 cut(s) 1029
BspTNI GGTCTC 2 cut(s) 74, 764
BsrFI RCCGGY 2 cut(s) 643, 722
BsrGI TGTACA 2 cut(s) 783, 996
BsrI ACTGG 3 cut(s) 794, 1065, 1118
BssAI RCCGGY 2 cut(s) 643, 722
BssECI CCNNGG 3 cut(s) 906, 1017, 1040
BssMI GATC 4 cut(s) 203, 684, 732, 1021
BssT1I CCWWGG 1 cut(s) 906
Bst2UI CCWGG 4 cut(s) 395, 664, 919, 986
Bst4CI ACNGT 2 cut(s) 74, 848
Bst6I CTCTTC 2 cut(s) 540, 645
BstAUI TGTACA 2 cut(s) 783, 996
BstC8I GCNNGC 3 cut(s) 350, 591, 645
BstDEI CTNAG 8 cut(s) 78, 353, 407, 599, 630, 729, 1012, 1131
BstDSI CCRYGG 2 cut(s) 1017, 1040
BstF5I GGATG 4 cut(s) 375, 481, 872, 954
BstFNI CGCG 1 cut(s) 752
BstHHI GCGC 1 cut(s) 1127
BstKTI GATC 4 cut(s) 206, 687, 735, 1024
BstMAI GTCTC 4 cut(s) 74, 302, 764, 935
BstMBI GATC 4 cut(s) 203, 684, 732, 1021
BstMCI CGRYCG 2 cut(s) 206, 421
BstNI CCWGG 4 cut(s) 395, 664, 919, 986
BstSCI CCNGG 5 cut(s) 393, 498, 662, 917, 984
BstSLI GKGCMC 1 cut(s) 350
BstUI CGCG 1 cut(s) 752
BstV1I GCAGC 4 cut(s) 158, 360, 585, 1130
BstV2I GAAGAC 3 cut(s) 561, 908, 1071
BstX2I RGATCY 1 cut(s) 1021
BstYI RGATCY 1 cut(s) 1021
Bsu36I CCTNAGG 1 cut(s) 407
BsuI GTATCC 1 cut(s) 223
BsuRI GGCC 2 cut(s) 793, 1045
BtgI CCRYGG 2 cut(s) 1017, 1040
BtsCI GGATG 4 cut(s) 375, 481, 872, 954
BtsI GCAGTG 2 cut(s) 98, 291
BtsIMutI CAGTG 4 cut(s) 98, 291, 361, 620
BtuMI TCGCGA 1 cut(s) 752
Cac8I GCNNGC 3 cut(s) 350, 591, 645
CfoI GCGC 1 cut(s) 1127
Cfr10I RCCGGY 2 cut(s) 643, 722
Cfr13I GGNCC 2 cut(s) 391, 1037
CseI GACGC 1 cut(s) 595
Csp6I GTAC 3 cut(s) 75, 784, 997
CspAI ACCGGT 1 cut(s) 722
CviAII CATG 3 cut(s) 383, 738, 1000
CviQI GTAC 3 cut(s) 75, 784, 997
DdeI CTNAG 8 cut(s) 78, 353, 407, 599, 630, 729, 1012, 1131
DpnI GATC 4 cut(s) 205, 686, 734, 1023
DpnII GATC 4 cut(s) 203, 684, 732, 1021
DraI TTTAAA 1 cut(s) 582
EaeI YGGCCR 1 cut(s) 791
Eam1104I CTCTTC 2 cut(s) 540, 645
EarI CTCTTC 2 cut(s) 540, 645
Eco130I CCWWGG 1 cut(s) 906
Eco31I GGTCTC 2 cut(s) 74, 764
Eco47I GGWCC 2 cut(s) 391, 1037
Eco57I CTGAAG 2 cut(s) 195, 525
Eco81I CCTNAGG 1 cut(s) 407
Eco88I CYCGRG 2 cut(s) 896, 1070
EcoRII CCWGG 4 cut(s) 393, 662, 917, 984
EcoT14I CCWWGG 1 cut(s) 906
ErhI CCWWGG 1 cut(s) 906
FaeI CATG 3 cut(s) 386, 741, 1003
FaiI YATR 9 cut(s) 384, 458, 691, 739, 746, 757, 776, 837, 1001
FatI CATG 3 cut(s) 382, 737, 999
FbaI TGATCA 1 cut(s) 684
FblI GTMKAC 2 cut(s) 7, 617
Fnu4HI GCNGC 4 cut(s) 147, 374, 574, 1144
FokI GGATG 4 cut(s) 382, 488, 879, 941
Fsp4HI GCNGC 4 cut(s) 147, 374, 574, 1144
FspBI CTAG 2 cut(s) 927, 1147
GlaI GCGC 1 cut(s) 1126
GluI GCNGC 4 cut(s) 147, 374, 574, 1144
GsaI CCCAGC 1 cut(s) 1079
GsuI CTGGAG 3 cut(s) 385, 416, 1007
HaeIII GGCC 2 cut(s) 793, 1045
HapII CCGG 4 cut(s) 49, 500, 644, 723
HgaI GACGC 1 cut(s) 595
HhaI GCGC 1 cut(s) 1127
Hin1II CATG 3 cut(s) 386, 741, 1003
Hin6I GCGC 1 cut(s) 1125
HinP1I GCGC 1 cut(s) 1125
HincII GTYRAC 2 cut(s) 618, 636
HindII GTYRAC 2 cut(s) 618, 636
HindIII AAGCTT 1 cut(s) 1102
HinfI GANTC 8 cut(s) 32, 167, 194, 557, 614, 922, 943, 951
HpaII CCGG 4 cut(s) 49, 500, 644, 723
HphI GGTGA 5 cut(s) 472, 485, 706, 1091, 1129
Hpy166II GTNNAC 7 cut(s) 8, 56, 348, 526, 618, 636, 761
Hpy188I TCNGA 7 cut(s) 125, 160, 602, 732, 807, 959, 1026
Hpy188III TCNNGA 7 cut(s) 198, 218, 364, 406, 751, 814, 898
Hpy8I GTNNAC 7 cut(s) 8, 56, 348, 526, 618, 636, 761
HpyAV CCTTC 3 cut(s) 500, 815, 881
HpyCH4III ACNGT 2 cut(s) 74, 848
HpyCH4IV ACGT 1 cut(s) 86
HpyCH4V TGCA 5 cut(s) 103, 348, 359, 376, 1090
HpyF3I CTNAG 8 cut(s) 78, 353, 407, 599, 630, 729, 1012, 1131
HpySE526I ACGT 1 cut(s) 86
Hsp92II CATG 3 cut(s) 386, 741, 1003
HspAI GCGC 1 cut(s) 1125
KroI GCCGGC 1 cut(s) 643
KroNI GCCGGC 1 cut(s) 645
Ksp22I TGATCA 1 cut(s) 684
Kzo9I GATC 4 cut(s) 203, 684, 732, 1021
LmnI GCTCC 1 cut(s) 988
Lsp1109I GCAGC 4 cut(s) 158, 360, 585, 1130
LweI GCATC 3 cut(s) 360, 649, 857
MaeI CTAG 2 cut(s) 927, 1147
MaeII ACGT 1 cut(s) 86
MaeIII GTNAC 3 cut(s) 29, 478, 825
MalI GATC 4 cut(s) 205, 686, 734, 1023
MboI GATC 4 cut(s) 203, 684, 732, 1021
MflI RGATCY 1 cut(s) 1021
MhlI GDGCHC 2 cut(s) 350, 730
MlsI TGGCCA 1 cut(s) 793
MluCI AATT 4 cut(s) 14, 801, 975, 1053
MluNI TGGCCA 1 cut(s) 793
MlyI GAGTC 4 cut(s) 26, 551, 623, 937
Mox20I TGGCCA 1 cut(s) 793
MroNI GCCGGC 1 cut(s) 643
MscI TGGCCA 1 cut(s) 793
MseI TTAA 4 cut(s) 90, 327, 581, 800
MslI CAYNNNNRTG 3 cut(s) 23, 381, 779
Msp20I TGGCCA 1 cut(s) 793
MspI CCGG 4 cut(s) 49, 500, 644, 723
MspR9I CCNGG 5 cut(s) 395, 500, 664, 919, 986
Mva1269I GAATGC 1 cut(s) 359
MvaI CCWGG 4 cut(s) 395, 664, 919, 986
MvnI CGCG 1 cut(s) 752
NaeI GCCGGC 1 cut(s) 645
NciI CCSGG 1 cut(s) 500
NdeII GATC 4 cut(s) 203, 684, 732, 1021
NgoMIV GCCGGC 1 cut(s) 643
NlaIII CATG 3 cut(s) 386, 741, 1003
NlaIV GGNNCC 1 cut(s) 893
NmuCI GTSAC 2 cut(s) 29, 478
NruI TCGCGA 1 cut(s) 752
PaeR7I CTCGAG 2 cut(s) 896, 1070
PcsI WCGNNNNNNNCGW 1 cut(s) 955
PctI GAATGC 1 cut(s) 359
PdiI GCCGGC 1 cut(s) 645
PfeI GAWTC 4 cut(s) 167, 194, 922, 951
PinAI ACCGGT 1 cut(s) 722
PkrI GCNGC 4 cut(s) 148, 375, 575, 1145
Ple19I CGATCG 1 cut(s) 206
PleI GAGTC 4 cut(s) 26, 551, 622, 937
PpsI GAGTC 4 cut(s) 26, 551, 622, 937
PshBI ATTAAT 1 cut(s) 800
Psp6I CCWGG 4 cut(s) 393, 662, 917, 984
PspFI CCCAGC 1 cut(s) 1075
PspGI CCWGG 4 cut(s) 393, 662, 917, 984
PspN4I GGNNCC 1 cut(s) 893
PspPI GGNCC 2 cut(s) 391, 1037
PspXI VCTCGAGB 1 cut(s) 1070
PsuI RGATCY 1 cut(s) 1021
PvuI CGATCG 1 cut(s) 206
RruI TCGCGA 1 cut(s) 752
RsaI GTAC 3 cut(s) 76, 785, 998
RsaNI GTAC 3 cut(s) 75, 784, 997
RseI CAYNNNNRTG 3 cut(s) 23, 381, 779
SalI GTCGAC 1 cut(s) 616
SaqAI TTAA 4 cut(s) 90, 327, 581, 800
SatI GCNGC 4 cut(s) 147, 374, 574, 1144
Sau3AI GATC 4 cut(s) 203, 684, 732, 1021
Sau96I GGNCC 2 cut(s) 391, 1037
SchI GAGTC 4 cut(s) 26, 551, 623, 937
ScrFI CCNGG 5 cut(s) 395, 500, 664, 919, 986
SduI GDGCHC 2 cut(s) 350, 730
SfaNI GCATC 3 cut(s) 360, 649, 857
Sfr274I CTCGAG 2 cut(s) 896, 1070
SinI GGWCC 2 cut(s) 391, 1037
SlaI CTCGAG 2 cut(s) 896, 1070
SmiMI CAYNNNNRTG 3 cut(s) 23, 381, 779
SmlI CTYRAG 2 cut(s) 896, 1070
SmoI CTYRAG 2 cut(s) 896, 1070
Sse9I AATT 4 cut(s) 14, 801, 975, 1053
SsiI CCGC 3 cut(s) 389, 421, 483
SspI AATATT 1 cut(s) 567
SspMI CTAG 2 cut(s) 927, 1147
StyD4I CCNGG 5 cut(s) 393, 498, 662, 917, 984
StyI CCWWGG 1 cut(s) 906
TaaI ACNGT 2 cut(s) 74, 848
TaiI ACGT 1 cut(s) 89
TaqI TCGA 6 cut(s) 66, 206, 417, 617, 897, 1071
TasI AATT 4 cut(s) 14, 801, 975, 1053
TatI WGTACW 3 cut(s) 74, 783, 996
TfiI GAWTC 4 cut(s) 167, 194, 922, 951
Tru1I TTAA 4 cut(s) 90, 327, 581, 800
Tru9I TTAA 4 cut(s) 90, 327, 581, 800
TscAI CASTG 4 cut(s) 105, 291, 361, 627
TseFI GTSAC 2 cut(s) 29, 478
TseI GCWGC 4 cut(s) 146, 373, 573, 1143
Tsp45I GTSAC 2 cut(s) 29, 478
TspDTI ATGAA 6 cut(s) 132, 177, 204, 399, 943, 1016
TspGWI ACGGA 2 cut(s) 482, 778
TspRI CASTG 4 cut(s) 105, 291, 361, 627
VneI GTGCAC 1 cut(s) 346
VpaK11BI GGWCC 2 cut(s) 391, 1037
VspI ATTAAT 1 cut(s) 800
XapI RAATTY 2 cut(s) 14, 975
XhoI CTCGAG 2 cut(s) 896, 1070
XmiI GTMKAC 2 cut(s) 7, 617
XspI CTAG 2 cut(s) 927, 1147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.