Rh4AG346500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0000060
Physical Location & Seq
Forward (+)
65480413 .. 65485752
5340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG346500.1

Sequence Viewer

Length: 1164 bp
ATGACTGAGGTGATGCAGGAAAACAGATCGCACCAGAACCACATAAAAGCTCTGAAGAAATGTTTGGCGAAAGGAACCAGCAGGAACCCTGACCTGAAAAGCAGTGAGCAACAAAATAATCAACAACAGATGGTGCAGGTGTCGACCGAGAAAGATCACAGGAGGGAATCTACGGGGAACTTTGCAGAATATGACACTCAAACACCAGTCAACGAAGAACCAAGGGCAGCAGATCCAATTAATGCATCTCCAATATCTTACAAGAGTCCAGAACGGGAAGTGTTTGAGGATACACATTTGGTCACACTAAATGAGATGGAATCAGAAAAAATAGATCAACTTGTGTCGAAAATACTGGAAGCAGCTGAGACGGTTGAAATGCCTGAGGCAGGAACAGAAATGGCAGTACCATCGGTCCCCAGGGAGAAGAAAACGGTTGACATGCATTCAATCGAGAGGAATGTGAAAGTAAAAAAGAGAAAGACAGCTGTGAAGGACAAGGACGATGACTTTGAGTATGACACACCGGAGATCCTGAAGACTTATGAAAAGAAAAGAAAGACTGCTGCACAGGAACAGCCAAAGCAGAAAAAGAAAGCACAACCGAAGCCGCCAACAAAAATTCAGAAAGGAAAAGAAGTGCAGCACCAAATACAAATAAAAGAGGTGAATTGTGAGAAGTACACATGGAAAACATTAAAGCCTGAACTAGCAAGACACTACCAGCAATTCTTTGAGATGGTGGATGACAATACATATGTCTACTGGAGCAGTGAAAATGGAATACTAGGGGTAACCAGGGGAGACATGAAGATTATCGTAGAAGAGAAAGATCTGGATGTTAATGTGGTCAAGGCTTACACTGAAATGTTGCAGAAGGAAATGAAACAAACGAACACTCAGATTGGATTACTAAACATCGAAGCAGCGCTGATTTATGGAGGATTGCGATCGTGGCTGGGTTTAGATTTGTTTCCAAGCGGCGGCTCGATGGTATCGGTTTATGTGCGACGTGAGGCACTGGTTTGTGGGATGAGGGCAGTTGCGGCGTGTATTGACTACTACACAGGGAGGCAGCGCTTGGTTGAGGTGGACCAAGCCATCTGTTTAGGCTTTGGGTTGGGATGTTCTTTTAGACCATTAGGTTGTTGCCCTTCTAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

387

Amino Acids

44.12

Weight (kDa)

6.69

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 127
Acc36I ACCTGC 1 cut(s) 127
AccI GTMKAC 2 cut(s) 143, 762
AciI CCGC 4 cut(s) 611, 981, 984, 1046
AclWI GGATC 2 cut(s) 227, 526
AcsI RAATTY 1 cut(s) 621
AcuI CTGAAG 2 cut(s) 74, 557
AfaI GTAC 2 cut(s) 408, 683
AfeI AGCGCT 2 cut(s) 930, 1079
AfiI CCNNNNNNNGG 2 cut(s) 389, 983
AgsI TTSAA 2 cut(s) 377, 450
AjiI CACGTC 1 cut(s) 1013
AjnI CCWGG 2 cut(s) 419, 797
AjuI GAANNNNNNNTTGG 2 cut(s) 47, 79
AluBI AGCT 3 cut(s) 50, 365, 488
AluI AGCT 3 cut(s) 50, 365, 488
Alw26I GTCTC 2 cut(s) 362, 798
AlwI GGATC 2 cut(s) 227, 526
Aor51HI AGCGCT 2 cut(s) 930, 1079
ApeKI GCWGC 6 cut(s) 227, 362, 566, 643, 926, 1075
ApoI RAATTY 1 cut(s) 621
ArsI GACNNNNNNTTYG 2 cut(s) 494, 526
AseI ATTAAT 1 cut(s) 240
AspLEI GCGC 2 cut(s) 931, 1080
AspS9I GGNCC 2 cut(s) 415, 1093
AsuHPI GGTGA 2 cut(s) 22, 679
AvaII GGWCC 2 cut(s) 415, 1093
AxyI CCTNAGG 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 545
BbvI GCAGC 6 cut(s) 239, 374, 553, 655, 938, 1087
BccI CCATC 6 cut(s) 124, 310, 418, 733, 985, 1109
BcgI CGANNNNNNTGC 2 cut(s) 393, 427
BciT130I CCWGG 2 cut(s) 421, 799
BciVI GTATCC 1 cut(s) 283
BcoDI GTCTC 2 cut(s) 362, 798
BfaI CTAG 2 cut(s) 710, 788
BfoI RGCGCY 2 cut(s) 932, 1081
BfuAI ACCTGC 1 cut(s) 127
BfuI GTATCC 1 cut(s) 283
BglII AGATCT 1 cut(s) 832
Bme1390I CCNGG 2 cut(s) 421, 799
Bme18I GGWCC 2 cut(s) 415, 1093
BmgBI CACGTC 1 cut(s) 1013
BmgT120I GGNCC 2 cut(s) 415, 1093
BmiI GGNNCC 3 cut(s) 76, 86, 417
BmrFI CCNGG 2 cut(s) 421, 799
BmsI GCATC 2 cut(s) 3, 254
BpiI GAAGAC 1 cut(s) 545
BpmI CTGGAG 1 cut(s) 787
BsaBI GATNNNNATC 1 cut(s) 949
BsaJI CCNNGG 4 cut(s) 221, 419, 420, 798
BsaWI WCCGGW 1 cut(s) 526
Bsc4I CCNNNNNNNGG 2 cut(s) 389, 983
Bse1I ACTGG 4 cut(s) 206, 360, 770, 1026
Bse21I CCTNAGG 1 cut(s) 384
Bse8I GATNNNNATC 1 cut(s) 949
BseBI CCWGG 2 cut(s) 421, 799
BseDI CCNNGG 4 cut(s) 221, 419, 420, 798
BseGI GGATG 4 cut(s) 751, 844, 1038, 1130
BseJI GATNNNNATC 1 cut(s) 949
BseLI CCNNNNNNNGG 2 cut(s) 389, 983
BseMII CTCAG 3 cut(s) 357, 375, 914
BseNI ACTGG 4 cut(s) 206, 360, 770, 1026
BseXI GCAGC 6 cut(s) 239, 374, 553, 655, 938, 1087
BseYI CCCAGC 1 cut(s) 958
BsgI GTGCAG 3 cut(s) 155, 552, 662
Bsh1285I CGRYCG 2 cut(s) 147, 953
BsiEI CGRYCG 2 cut(s) 147, 953
BsiSI CCGG 1 cut(s) 527
BslFI GGGAC 1 cut(s) 401
BslI CCNNNNNNNGG 2 cut(s) 389, 983
BsmAI GTCTC 2 cut(s) 362, 798
BsmBI CGTCTC 1 cut(s) 362
BsmFI GGGAC 1 cut(s) 401
BsmI GAATGC 1 cut(s) 445
Bsp143I GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
BspACI CCGC 4 cut(s) 611, 981, 984, 1046
BspCNI CTCAG 3 cut(s) 358, 376, 913
BspLI GGNNCC 3 cut(s) 76, 86, 417
BspMI ACCTGC 1 cut(s) 127
BspPI GGATC 2 cut(s) 227, 526
BsrI ACTGG 4 cut(s) 206, 360, 770, 1026
BssECI CCNNGG 4 cut(s) 221, 419, 420, 798
BssMI GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
BssT1I CCWWGG 1 cut(s) 221
Bst2UI CCWGG 2 cut(s) 421, 799
Bst4CI ACNGT 2 cut(s) 373, 436
Bst6I CTCTTC 1 cut(s) 819
BstDEI CTNAG 4 cut(s) 6, 366, 384, 900
BstEII GGTNACC 1 cut(s) 793
BstENI CCTNNNNNAGG 1 cut(s) 387
BstF5I GGATG 4 cut(s) 751, 844, 1038, 1130
BstH2I RGCGCY 2 cut(s) 932, 1081
BstHHI GCGC 2 cut(s) 931, 1080
BstKTI GATC 7 cut(s) 29, 157, 235, 337, 534, 835, 953
BstMAI GTCTC 2 cut(s) 362, 798
BstMBI GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
BstMCI CGRYCG 2 cut(s) 147, 953
BstMWI GCNNNNNNNGC 2 cut(s) 955, 1046
BstNI CCWGG 2 cut(s) 421, 799
BstNSI RCATGY 1 cut(s) 445
BstPI GGTNACC 1 cut(s) 793
BstSCI CCNGG 2 cut(s) 419, 797
BstV1I GCAGC 6 cut(s) 239, 374, 553, 655, 938, 1087
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 3 cut(s) 232, 531, 832
BstYI RGATCY 3 cut(s) 232, 531, 832
Bsu36I CCTNAGG 1 cut(s) 384
BsuI GTATCC 1 cut(s) 283
BtrI CACGTC 1 cut(s) 1013
BtsCI GGATG 4 cut(s) 751, 844, 1038, 1130
BtsI GCAGTG 2 cut(s) 109, 778
BtsIMutI CAGTG 4 cut(s) 109, 778, 861, 1019
BveI ACCTGC 1 cut(s) 127
CfoI GCGC 2 cut(s) 931, 1080
Cfr13I GGNCC 2 cut(s) 415, 1093
Csp6I GTAC 2 cut(s) 407, 682
CviAII CATG 3 cut(s) 442, 687, 808
CviQI GTAC 2 cut(s) 407, 682
DdeI CTNAG 4 cut(s) 6, 366, 384, 900
DpnI GATC 7 cut(s) 28, 156, 234, 336, 533, 834, 952
DpnII GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
Eam1104I CTCTTC 1 cut(s) 819
EarI CTCTTC 1 cut(s) 819
Eco130I CCWWGG 1 cut(s) 221
Eco47I GGWCC 2 cut(s) 415, 1093
Eco47III AGCGCT 2 cut(s) 930, 1079
Eco57I CTGAAG 2 cut(s) 74, 557
Eco81I CCTNAGG 1 cut(s) 384
Eco91I GGTNACC 1 cut(s) 793
EcoNI CCTNNNNNAGG 1 cut(s) 387
EcoO65I GGTNACC 1 cut(s) 793
EcoRII CCWGG 2 cut(s) 419, 797
EcoT14I CCWWGG 1 cut(s) 221
EcoT22I ATGCAT 2 cut(s) 247, 447
ErhI CCWWGG 1 cut(s) 221
Esp3I CGTCTC 1 cut(s) 362
FaeI CATG 3 cut(s) 445, 690, 811
FaqI GGGAC 1 cut(s) 401
FatI CATG 3 cut(s) 441, 686, 807
FauNDI CATATG 1 cut(s) 757
FblI GTMKAC 2 cut(s) 143, 762
FokI GGATG 4 cut(s) 758, 851, 1045, 1137
FspBI CTAG 2 cut(s) 710, 788
GlaI GCGC 2 cut(s) 930, 1079
GsaI CCCAGC 1 cut(s) 962
GsuI CTGGAG 1 cut(s) 787
HaeII RGCGCY 2 cut(s) 932, 1081
HapII CCGG 1 cut(s) 527
HhaI GCGC 2 cut(s) 931, 1080
Hin1II CATG 3 cut(s) 445, 690, 811
Hin6I GCGC 2 cut(s) 929, 1078
HinP1I GCGC 2 cut(s) 929, 1078
HincII GTYRAC 3 cut(s) 144, 211, 439
HindII GTYRAC 3 cut(s) 144, 211, 439
HinfI GANTC 3 cut(s) 167, 265, 320
HpaII CCGG 1 cut(s) 527
HphI GGTGA 2 cut(s) 22, 679
Hpy166II GTNNAC 6 cut(s) 144, 211, 439, 684, 763, 1093
Hpy188I TCNGA 4 cut(s) 54, 325, 627, 903
Hpy188III TCNNGA 4 cut(s) 269, 454, 535, 836
Hpy8I GTNNAC 6 cut(s) 144, 211, 439, 684, 763, 1093
Hpy99I CGWCG 1 cut(s) 1014
HpyAV CCTTC 3 cut(s) 487, 871, 1164
HpyCH4III ACNGT 2 cut(s) 373, 436
HpyCH4IV ACGT 1 cut(s) 1012
HpyCH4V TGCA 8 cut(s) 16, 136, 185, 245, 445, 569, 643, 874
HpyF10VI GCNNNNNNNGC 2 cut(s) 955, 1046
HpyF3I CTNAG 4 cut(s) 6, 366, 384, 900
HpySE526I ACGT 1 cut(s) 1012
Hsp92II CATG 3 cut(s) 445, 690, 811
HspAI GCGC 2 cut(s) 929, 1078
Kzo9I GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
LmnI GCTCC 1 cut(s) 768
Lsp1109I GCAGC 6 cut(s) 239, 374, 553, 655, 938, 1087
LweI GCATC 2 cut(s) 3, 254
MaeI CTAG 2 cut(s) 710, 788
MaeII ACGT 1 cut(s) 1012
MaeIII GTNAC 2 cut(s) 301, 793
MalI GATC 7 cut(s) 28, 156, 234, 336, 533, 834, 952
MboI GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
MboII GAAGA 6 cut(s) 67, 227, 439, 550, 823, 836
MflI RGATCY 3 cut(s) 232, 531, 832
MluCI AATT 5 cut(s) 237, 621, 670, 728, 1159
MlyI GAGTC 1 cut(s) 274
Mph1103I ATGCAT 2 cut(s) 247, 447
MseI TTAA 3 cut(s) 240, 698, 843
MslI CAYNNNNRTG 1 cut(s) 866
MspA1I CMGCKG 2 cut(s) 365, 488
MspI CCGG 1 cut(s) 527
MspR9I CCNGG 2 cut(s) 421, 799
Mva1269I GAATGC 1 cut(s) 445
MvaI CCWGG 2 cut(s) 421, 799
MwoI GCNNNNNNNGC 2 cut(s) 955, 1046
NdeI CATATG 1 cut(s) 757
NdeII GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
NlaIII CATG 3 cut(s) 445, 690, 811
NlaIV GGNNCC 3 cut(s) 76, 86, 417
NmuCI GTSAC 1 cut(s) 301
NsiI ATGCAT 2 cut(s) 247, 447
NspI RCATGY 1 cut(s) 445
PaqCI CACCTGC 1 cut(s) 127
PasI CCCWGGG 1 cut(s) 420
PctI GAATGC 1 cut(s) 445
PfeI GAWTC 2 cut(s) 167, 320
Ple19I CGATCG 1 cut(s) 953
PleI GAGTC 1 cut(s) 273
PpsI GAGTC 1 cut(s) 273
PshBI ATTAAT 1 cut(s) 240
Psp6I CCWGG 2 cut(s) 419, 797
PspEI GGTNACC 1 cut(s) 793
PspFI CCCAGC 1 cut(s) 958
PspGI CCWGG 2 cut(s) 419, 797
PspN4I GGNNCC 3 cut(s) 76, 86, 417
PspPI GGNCC 2 cut(s) 415, 1093
PsuI RGATCY 3 cut(s) 232, 531, 832
PvuI CGATCG 1 cut(s) 953
PvuII CAGCTG 2 cut(s) 365, 488
RsaI GTAC 2 cut(s) 408, 683
RsaNI GTAC 2 cut(s) 407, 682
RseI CAYNNNNRTG 1 cut(s) 866
SalI GTCGAC 1 cut(s) 142
SaqAI TTAA 3 cut(s) 240, 698, 843
Sau3AI GATC 7 cut(s) 26, 154, 232, 334, 531, 832, 950
Sau96I GGNCC 2 cut(s) 415, 1093
SchI GAGTC 1 cut(s) 274
ScrFI CCNGG 2 cut(s) 421, 799
SfaNI GCATC 2 cut(s) 3, 254
SinI GGWCC 2 cut(s) 415, 1093
SmiMI CAYNNNNRTG 1 cut(s) 866
Sse9I AATT 5 cut(s) 237, 621, 670, 728, 1159
SsiI CCGC 4 cut(s) 611, 981, 984, 1046
SspMI CTAG 2 cut(s) 710, 788
StyD4I CCNGG 2 cut(s) 419, 797
StyI CCWWGG 1 cut(s) 221
TaaI ACNGT 2 cut(s) 373, 436
TaiI ACGT 1 cut(s) 1015
TaqI TCGA 5 cut(s) 143, 347, 453, 921, 989
TaqII GACCGA 2 cut(s) 161, 403
TasI AATT 5 cut(s) 237, 621, 670, 728, 1159
TatI WGTACW 1 cut(s) 681
TauI GCSGC 4 cut(s) 613, 984, 987, 1049
TfiI GAWTC 2 cut(s) 167, 320
Tru1I TTAA 3 cut(s) 240, 698, 843
Tru9I TTAA 3 cut(s) 240, 698, 843
TscAI CASTG 4 cut(s) 109, 778, 868, 1026
TseFI GTSAC 1 cut(s) 301
TseI GCWGC 6 cut(s) 227, 362, 566, 643, 926, 1075
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 3 cut(s) 561, 824, 899
TspRI CASTG 4 cut(s) 109, 778, 868, 1026
VpaK11BI GGWCC 2 cut(s) 415, 1093
VspI ATTAAT 1 cut(s) 240
XagI CCTNNNNNAGG 1 cut(s) 387
XapI RAATTY 1 cut(s) 621
XceI RCATGY 1 cut(s) 445
XmiI GTMKAC 2 cut(s) 143, 762
XspI CTAG 2 cut(s) 710, 788
Zsp2I ATGCAT 2 cut(s) 247, 447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.