Protein ALWAYS EARLY
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Myb_DNA-binding | PF00249 | 46 - 81 | 5.1e-06 | Myb-like DNA-binding domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 4 cut(s) | 168, 195, 612, 663 |
| AcyI | GRCGYC | 1 cut(s) | 435 |
| AfaI | GTAC | 2 cut(s) | 219, 820 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 12, 232 |
| AflIII | ACRYGT | 1 cut(s) | 123 |
| AgsI | TTSAA | 5 cut(s) | 486, 517, 643, 695, 709 |
| AluBI | AGCT | 4 cut(s) | 154, 409, 721, 743 |
| AluI | AGCT | 4 cut(s) | 154, 409, 721, 743 |
| Alw21I | GWGCWC | 1 cut(s) | 745 |
| Ama87I | CYCGRG | 2 cut(s) | 7, 284 |
| AoxI | GGCC | 5 cut(s) | 3, 131, 246, 267, 307 |
| ApeKI | GCWGC | 1 cut(s) | 501 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 530, 562 |
| AspLEI | GCGC | 1 cut(s) | 528 |
| AspS9I | GGNCC | 5 cut(s) | 4, 131, 141, 247, 267 |
| AsuC2I | CCSGG | 2 cut(s) | 8, 9 |
| AsuHPI | GGTGA | 1 cut(s) | 215 |
| AvaI | CYCGRG | 2 cut(s) | 7, 284 |
| AvaII | GGWCC | 1 cut(s) | 141 |
| BaeGI | GKGCMC | 1 cut(s) | 293 |
| BanII | GRGCYC | 1 cut(s) | 745 |
| BbsI | GAAGAC | 2 cut(s) | 543, 702 |
| Bbv12I | GWGCWC | 1 cut(s) | 745 |
| BbvI | GCAGC | 1 cut(s) | 488 |
| BccI | CCATC | 1 cut(s) | 491 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 275, 309 |
| BcnI | CCSGG | 2 cut(s) | 8, 9 |
| BfaI | CTAG | 1 cut(s) | 464 |
| BglII | AGATCT | 1 cut(s) | 571 |
| BisI | GCNGC | 1 cut(s) | 502 |
| BlsI | GCNGC | 1 cut(s) | 503 |
| Bme1390I | CCNGG | 2 cut(s) | 8, 9 |
| Bme18I | GGWCC | 1 cut(s) | 141 |
| BmeT110I | CYCGRG | 2 cut(s) | 7, 284 |
| BmgT120I | GGNCC | 5 cut(s) | 4, 131, 141, 247, 267 |
| BmiI | GGNNCC | 2 cut(s) | 6, 388 |
| BmrFI | CCNGG | 2 cut(s) | 8, 9 |
| BmsI | GCATC | 3 cut(s) | 500, 541, 576 |
| BpiI | GAAGAC | 2 cut(s) | 543, 702 |
| BpuEI | CTTGAG | 1 cut(s) | 601 |
| BpuMI | CCSGG | 2 cut(s) | 8, 9 |
| BsaHI | GRCGYC | 1 cut(s) | 435 |
| BsaJI | CCNNGG | 3 cut(s) | 6, 7, 285 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 12, 232 |
| Bse1I | ACTGG | 3 cut(s) | 200, 763, 788 |
| Bse3DI | GCAATG | 2 cut(s) | 324, 645 |
| BseDI | CCNNGG | 3 cut(s) | 6, 7, 285 |
| BseGI | GGATG | 2 cut(s) | 204, 591 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 12, 232 |
| BseMI | GCAATG | 2 cut(s) | 324, 645 |
| BseMII | CTCAG | 2 cut(s) | 488, 731 |
| BseNI | ACTGG | 3 cut(s) | 200, 763, 788 |
| BseSI | GKGCMC | 1 cut(s) | 293 |
| BseXI | GCAGC | 1 cut(s) | 488 |
| BseYI | CCCAGC | 1 cut(s) | 721 |
| BsgI | GTGCAG | 1 cut(s) | 603 |
| BshFI | GGCC | 5 cut(s) | 5, 133, 248, 269, 309 |
| BsiHKAI | GWGCWC | 1 cut(s) | 745 |
| BsiHKCI | CYCGRG | 2 cut(s) | 7, 284 |
| BsiSI | CCGG | 1 cut(s) | 8 |
| BslFI | GGGAC | 1 cut(s) | 463 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 12, 232 |
| BsmFI | GGGAC | 1 cut(s) | 463 |
| BsnI | GGCC | 5 cut(s) | 5, 133, 248, 269, 309 |
| BsoBI | CYCGRG | 2 cut(s) | 7, 284 |
| Bsp1286I | GDGCHC | 2 cut(s) | 293, 745 |
| Bsp143I | GATC | 2 cut(s) | 227, 571 |
| BspANI | GGCC | 5 cut(s) | 5, 133, 248, 269, 309 |
| BspCNI | CTCAG | 2 cut(s) | 487, 730 |
| BspLI | GGNNCC | 2 cut(s) | 6, 388 |
| BspQI | GCTCTTC | 1 cut(s) | 144 |
| BsrDI | GCAATG | 2 cut(s) | 324, 645 |
| BsrI | ACTGG | 3 cut(s) | 200, 763, 788 |
| BssECI | CCNNGG | 3 cut(s) | 6, 7, 285 |
| BssMI | GATC | 2 cut(s) | 227, 571 |
| BssNI | GRCGYC | 1 cut(s) | 435 |
| Bst4CI | ACNGT | 3 cut(s) | 359, 513, 750 |
| Bst6I | CTCTTC | 3 cut(s) | 144, 285, 547 |
| BstACI | GRCGYC | 1 cut(s) | 435 |
| BstC8I | GCNNGC | 1 cut(s) | 411 |
| BstDEI | CTNAG | 3 cut(s) | 474, 651, 717 |
| BstF5I | GGATG | 2 cut(s) | 204, 591 |
| BstHHI | GCGC | 1 cut(s) | 528 |
| BstKTI | GATC | 2 cut(s) | 230, 574 |
| BstMBI | GATC | 2 cut(s) | 227, 571 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 406 |
| BstNSI | RCATGY | 1 cut(s) | 127 |
| BstSCI | CCNGG | 2 cut(s) | 6, 7 |
| BstSLI | GKGCMC | 1 cut(s) | 293 |
| BstV1I | GCAGC | 1 cut(s) | 488 |
| BstV2I | GAAGAC | 2 cut(s) | 543, 702 |
| BstX2I | RGATCY | 1 cut(s) | 571 |
| BstYI | RGATCY | 1 cut(s) | 571 |
| BsuRI | GGCC | 5 cut(s) | 5, 133, 248, 269, 309 |
| BtsCI | GGATG | 2 cut(s) | 204, 591 |
| BtsI | GCAGTG | 2 cut(s) | 291, 699 |
| BtsIMutI | CAGTG | 7 cut(s) | 144, 291, 364, 509, 528, 699, 756 |
| Cac8I | GCNNGC | 1 cut(s) | 411 |
| CfoI | GCGC | 1 cut(s) | 528 |
| Cfr13I | GGNCC | 5 cut(s) | 4, 131, 141, 247, 267 |
| Cfr9I | CCCGGG | 1 cut(s) | 7 |
| CseI | GACGC | 1 cut(s) | 443 |
| Csp6I | GTAC | 2 cut(s) | 218, 819 |
| CviAII | CATG | 1 cut(s) | 124 |
| CviQI | GTAC | 2 cut(s) | 218, 819 |
| DdeI | CTNAG | 3 cut(s) | 474, 651, 717 |
| DpnI | GATC | 2 cut(s) | 229, 573 |
| DpnII | GATC | 2 cut(s) | 227, 571 |
| Eam1104I | CTCTTC | 3 cut(s) | 144, 285, 547 |
| EarI | CTCTTC | 3 cut(s) | 144, 285, 547 |
| Ecl136II | GAGCTC | 1 cut(s) | 743 |
| Eco24I | GRGCYC | 1 cut(s) | 745 |
| Eco32I | GATATC | 1 cut(s) | 176 |
| Eco47I | GGWCC | 1 cut(s) | 141 |
| Eco53kI | GAGCTC | 1 cut(s) | 743 |
| Eco57I | CTGAAG | 4 cut(s) | 168, 195, 612, 663 |
| Eco88I | CYCGRG | 2 cut(s) | 7, 284 |
| EcoICRI | GAGCTC | 1 cut(s) | 743 |
| EcoO109I | RGGNCCY | 3 cut(s) | 131, 247, 267 |
| EcoRV | GATATC | 1 cut(s) | 176 |
| EcoT38I | GRGCYC | 1 cut(s) | 745 |
| FaeI | CATG | 1 cut(s) | 127 |
| FaiI | YATR | 9 cut(s) | 48, 75, 125, 168, 186, 260, 341, 459, 689 |
| FaqI | GGGAC | 1 cut(s) | 463 |
| FatI | CATG | 1 cut(s) | 123 |
| Fnu4HI | GCNGC | 1 cut(s) | 502 |
| FokI | GGATG | 2 cut(s) | 211, 598 |
| FriOI | GRGCYC | 1 cut(s) | 745 |
| Fsp4HI | GCNGC | 1 cut(s) | 502 |
| FspBI | CTAG | 1 cut(s) | 464 |
| GlaI | GCGC | 1 cut(s) | 527 |
| GluI | GCNGC | 1 cut(s) | 502 |
| GsaI | CCCAGC | 1 cut(s) | 725 |
| HaeIII | GGCC | 5 cut(s) | 5, 133, 248, 269, 309 |
| HapII | CCGG | 1 cut(s) | 8 |
| HgaI | GACGC | 1 cut(s) | 443 |
| HhaI | GCGC | 1 cut(s) | 528 |
| Hin1I | GRCGYC | 1 cut(s) | 435 |
| Hin1II | CATG | 1 cut(s) | 127 |
| Hin6I | GCGC | 1 cut(s) | 526 |
| HinP1I | GCGC | 1 cut(s) | 526 |
| HindIII | AAGCTT | 1 cut(s) | 407 |
| HinfI | GANTC | 3 cut(s) | 539, 611, 673 |
| HpaII | CCGG | 1 cut(s) | 8 |
| HphI | GGTGA | 1 cut(s) | 215 |
| Hpy166II | GTNNAC | 1 cut(s) | 362 |
| Hpy188I | TCNGA | 3 cut(s) | 121, 496, 754 |
| Hpy188III | TCNNGA | 2 cut(s) | 284, 464 |
| Hpy8I | GTNNAC | 1 cut(s) | 362 |
| HpyAV | CCTTC | 5 cut(s) | 6, 164, 196, 446, 687 |
| HpyCH4III | ACNGT | 3 cut(s) | 359, 513, 750 |
| HpyCH4IV | ACGT | 1 cut(s) | 220 |
| HpyCH4V | TGCA | 6 cut(s) | 372, 383, 413, 491, 554, 620 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 406 |
| HpyF3I | CTNAG | 3 cut(s) | 474, 651, 717 |
| HpySE526I | ACGT | 1 cut(s) | 220 |
| Hsp92I | GRCGYC | 1 cut(s) | 435 |
| Hsp92II | CATG | 1 cut(s) | 127 |
| HspAI | GCGC | 1 cut(s) | 526 |
| Kzo9I | GATC | 2 cut(s) | 227, 571 |
| LguI | GCTCTTC | 1 cut(s) | 144 |
| LmnI | GCTCC | 1 cut(s) | 740 |
| Lsp1109I | GCAGC | 1 cut(s) | 488 |
| LweI | GCATC | 3 cut(s) | 500, 541, 576 |
| MaeI | CTAG | 1 cut(s) | 464 |
| MaeII | ACGT | 1 cut(s) | 220 |
| MaeIII | GTNAC | 6 cut(s) | 221, 326, 353, 507, 682, 799 |
| MalI | GATC | 2 cut(s) | 229, 573 |
| MboI | GATC | 2 cut(s) | 227, 571 |
| MboII | GAAGA | 6 cut(s) | 161, 272, 534, 548, 644, 707 |
| MfeI | CAATTG | 1 cut(s) | 486 |
| MflI | RGATCY | 1 cut(s) | 571 |
| MhlI | GDGCHC | 2 cut(s) | 293, 745 |
| MluCI | AATT | 3 cut(s) | 422, 486, 823 |
| MlyI | GAGTC | 1 cut(s) | 533 |
| MseI | TTAA | 1 cut(s) | 792 |
| MslI | CAYNNNNRTG | 1 cut(s) | 165 |
| MspA1I | CMGCKG | 1 cut(s) | 721 |
| MspI | CCGG | 1 cut(s) | 8 |
| MspR9I | CCNGG | 2 cut(s) | 8, 9 |
| MunI | CAATTG | 1 cut(s) | 486 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 406 |
| NciI | CCSGG | 2 cut(s) | 8, 9 |
| NdeII | GATC | 2 cut(s) | 227, 571 |
| NlaIII | CATG | 1 cut(s) | 127 |
| NlaIV | GGNNCC | 2 cut(s) | 6, 388 |
| NmuCI | GTSAC | 5 cut(s) | 221, 326, 353, 507, 799 |
| NspI | RCATGY | 1 cut(s) | 127 |
| PciI | ACATGT | 1 cut(s) | 123 |
| PciSI | GCTCTTC | 1 cut(s) | 144 |
| PfeI | GAWTC | 2 cut(s) | 611, 673 |
| PkrI | GCNGC | 1 cut(s) | 503 |
| PleI | GAGTC | 1 cut(s) | 533 |
| PpsI | GAGTC | 1 cut(s) | 533 |
| PscI | ACATGT | 1 cut(s) | 123 |
| Psp124BI | GAGCTC | 1 cut(s) | 745 |
| PspFI | CCCAGC | 1 cut(s) | 721 |
| PspN4I | GGNNCC | 2 cut(s) | 6, 388 |
| PspPI | GGNCC | 5 cut(s) | 4, 131, 141, 247, 267 |
| PsuI | RGATCY | 1 cut(s) | 571 |
| PvuII | CAGCTG | 1 cut(s) | 721 |
| RsaI | GTAC | 2 cut(s) | 219, 820 |
| RsaNI | GTAC | 2 cut(s) | 218, 819 |
| RseI | CAYNNNNRTG | 1 cut(s) | 165 |
| SacI | GAGCTC | 1 cut(s) | 745 |
| SapI | GCTCTTC | 1 cut(s) | 144 |
| SaqAI | TTAA | 1 cut(s) | 792 |
| SatI | GCNGC | 1 cut(s) | 502 |
| Sau3AI | GATC | 2 cut(s) | 227, 571 |
| Sau96I | GGNCC | 5 cut(s) | 4, 131, 141, 247, 267 |
| SchI | GAGTC | 1 cut(s) | 533 |
| ScrFI | CCNGG | 2 cut(s) | 8, 9 |
| SduI | GDGCHC | 2 cut(s) | 293, 745 |
| SetI | ASST | 8 cut(s) | 41, 60, 156, 207, 223, 411, 723, 745 |
| SfaNI | GCATC | 3 cut(s) | 500, 541, 576 |
| SinI | GGWCC | 1 cut(s) | 141 |
| SmaI | CCCGGG | 1 cut(s) | 9 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 165 |
| SmlI | CTYRAG | 1 cut(s) | 580 |
| SmoI | CTYRAG | 1 cut(s) | 580 |
| Sse9I | AATT | 3 cut(s) | 422, 486, 823 |
| SspMI | CTAG | 1 cut(s) | 464 |
| SstI | GAGCTC | 1 cut(s) | 745 |
| StyD4I | CCNGG | 2 cut(s) | 6, 7 |
| TaaI | ACNGT | 3 cut(s) | 359, 513, 750 |
| TaiI | ACGT | 1 cut(s) | 223 |
| TaqI | TCGA | 1 cut(s) | 627 |
| TasI | AATT | 3 cut(s) | 422, 486, 823 |
| TfiI | GAWTC | 2 cut(s) | 611, 673 |
| Tru1I | TTAA | 1 cut(s) | 792 |
| Tru9I | TTAA | 1 cut(s) | 792 |
| TscAI | CASTG | 7 cut(s) | 151, 298, 364, 516, 535, 706, 763 |
| TseFI | GTSAC | 5 cut(s) | 221, 326, 353, 507, 799 |
| TseI | GCWGC | 1 cut(s) | 501 |
| Tsp45I | GTSAC | 5 cut(s) | 221, 326, 353, 507, 799 |
| TspDTI | ATGAA | 4 cut(s) | 183, 215, 275, 549 |
| TspGWI | ACGGA | 2 cut(s) | 442, 806 |
| TspMI | CCCGGG | 1 cut(s) | 7 |
| TspRI | CASTG | 7 cut(s) | 151, 298, 364, 516, 535, 706, 763 |
| VpaK11BI | GGWCC | 1 cut(s) | 141 |
| XbaI | TCTAGA | 1 cut(s) | 463 |
| XceI | RCATGY | 1 cut(s) | 127 |
| XmaI | CCCGGG | 1 cut(s) | 7 |
| XspI | CTAG | 1 cut(s) | 464 |