Rorug04G0343400

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
51570699 .. 51576016
5318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0343400.1

Sequence Viewer

Length: 1635 bp
ATGGGCACGATGACTCTCCTCTCCCTCCTCTCACTTGCCTCTCTTCTAACCGCCTCCGCTGCTCTGCCGCTCTCCACCTCCTCGCGGTGGATCGTCGACGAGAACGGGCAGCGCGTGAAGCTGGCGTGCGTGAACTGGGTGGCGCATCTCGACGCCGTCGTCGCTGAAGGCCTCAGCAAGCAGCCCCTCGACGCCATCTCCAAGCGTATCACCTCCCTCGGCTTCAACTGCGTCAGGCTGACGTGGCCGCTTTACTTGGCCACCAACGACTCCCTCGCCGCCGTCACTGTTCGTCAGTCGTTTCAGAGTCTCGGACTGCAGGAGTCCATTGCTGGGGTTCAGGGCAACAACCCCTCCCTCATCGATCTTCCGCTGTTAAAAGCTTTCCAGGAAGTGGTTTCTAGCCTTGGGAACAACAATGTGATGGTTATACTGGATAATCACATAAGCAAGCCTGGTTGGTGTTGCAGCAGCAATGATGACAATGGTTTCTTTGGGGACAAGTACTTTAACCCTGATCTTTGGATCAAGGGCCTTACTCAGATGGCCACGTTGTTCAAAGGCGTGTCCAATGTGGTGGGCATGAGCTTGAGGAATGAGCTGCGAGGACCCAAACAGAATGTCGAAGATTGGTACAGGTACATGCCGAGAGGAGCTGAGGCAGTGCACTCAGCAAACCCAGATGTGCTTGTGATTTTATCTGGCCTGAGTTATGACACAGACTTATCTTTCCTTAGCAACCAACCAGTAAAACTTACATTTTCCGGGAAACTAGTATATGAGTTGCACTGGTATGGTTTTTCAGATGGGCAGGCATGGAGGGATGGCAACCCCAACCAAGTCTGTGGGCGTGTGGCGGGTGAAGTGAAGAGAAAGGCAGGGTTTTTGCTAGATAAAGGGTTCCCATTATTTGTGAGTGAGTTTGGGGTTGACCAAAGAGGAACCAATGTGAATGACAATAGGTACTTAAACTGCTTCCTAGCTGCAGCTGCTGAACTTGATGTGGAGTTTGCTTTTTGGACTCTGGTTGGAAGTTATTATTTCAGGAGTGGGGTGGTCGGCATGAATGAGTATTATGGGCTCTTGAACTGGAATTGGGGTGAAATCCGTAATTCAAGTTTGCTGCAGCGACTCTCTGTCCTCCAATCTCCTTTCCAAGGGCCAGGTATATCTCAATCCAGGAAGCATAAGATTATTTTGCATCCATCCACAGGCCTTTGCCTTCTCAAAGTTGGATTCATGGGGCCATTGAAGTTGGGTCCATGCTCTCAGTCTGGAGCCTGGGGCTATTCATCCAGGAAGGTCCTAGCGCTTAAAGGAACATATTTCTGCATACAAGCTGATCAACTAGGGCGGCCAGCAACAGTTGGGATAATTTGTACAGACACTAATTCTCAATGGGACACCATCTCAGATTCTAAATTACACCTTCAGTCTACGACCCCCGACGGCACTGCAGTTTGCCTAGATGTAGACTCCAGTAACACCATCGTCACAAATTCCTGCAAATGCTTAAGCAAAGATAGTTCGTGTGACCCCGGAAGCCAATGGTTCAGTCTTGTTGATAGCACGGTAACTTCCAAGCCTGCAAGTCCCATTCTCCAGGTCAACTCTGTCTTGGATATGCTTGGATGA

Protein Analysis

544

Amino Acids

59.35

Weight (kDa)

6.65

Isoelectric Point (pI)

32.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cellulase PF00150 62 - 342 2.1e-25 Cellulase (glycosyl hydrolase family 5)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000060)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12321 FvH4_1g20524 FvH4_1g20530 FvH4_1g23171 FvH4_1g23680 FvH4_1g24741 FvH4_1g28820 FvH4_1g29280 FvH4_1g29720 FvH4_1g29863 FvH4_2g01890 FvH4_2g02830 FvH4_2g02900 FvH4_2g03221 FvH4_2g08390 FvH4_2g09410 FvH4_2g18180 FvH4_2g22690 FvH4_2g24331 FvH4_2g24332 FvH4_3g07040 FvH4_3g14115 FvH4_3g14832 FvH4_3g14840 FvH4_3g20080 FvH4_3g22851 FvH4_3g26680 FvH4_3g30870 FvH4_3g31130 FvH4_3g31290 FvH4_3g31340 FvH4_3g31511 FvH4_3g31540 FvH4_3g31630 FvH4_3g31650 FvH4_3g31718 FvH4_3g32160 FvH4_3g32170 FvH4_3g32440 FvH4_3g32704 FvH4_3g40980 FvH4_3g43750 FvH4_3g44630 FvH4_3g44640 FvH4_4g03490 FvH4_4g03491 FvH4_4g07032 FvH4_4g07033 FvH4_4g07034 FvH4_4g08150 FvH4_4g08260 FvH4_4g08530 FvH4_4g08574 FvH4_4g08592 FvH4_4g08722 FvH4_4g08780 FvH4_4g08970 FvH4_4g09900 FvH4_4g09920 FvH4_4g10200 FvH4_4g10272 FvH4_4g10300 FvH4_4g10310 FvH4_4g10311 FvH4_4g15272 FvH4_4g15273 FvH4_4g15920 FvH4_4g17740 FvH4_4g18650 FvH4_5g17873 FvH4_5g17874 FvH4_5g17875 FvH4_5g23330 FvH4_5g23340 FvH4_5g24282 FvH4_5g24283 FvH4_5g24921 FvH4_5g27850 FvH4_5g37401 FvH4_5g37402 FvH4_5g37521 FvH4_5g39780 FvH4_6g06710 FvH4_6g06720 FvH4_6g20370 FvH4_6g20960 FvH4_6g20970 FvH4_6g24332 FvH4_6g24333 FvH4_6g31350 FvH4_6g33380 FvH4_6g33570 FvH4_6g33600 FvH4_6g37990 FvH4_6g44210 FvH4_7g00311 FvH4_7g08490 FvH4_7g10290 FvH4_7g20281
rosa_chinensis RchiOBHm_Chr1g0318211 RchiOBHm_Chr1g0318221 RchiOBHm_Chr1g0363541 RchiOBHm_Chr3g0460221 RchiOBHm_Chr4g0421571 RchiOBHm_Chr4g0421591 RchiOBHm_Chr5g0072851 RchiOBHm_Chr6g0247251
rosa_laevigata RLG00000000827 RLG00000007666 RLG00000011058 RLG00000011382 RLG00000012708 RLG00000014760 RLG00000016708 RLG00000016784 RLG00000016785 RLG00000017723 RLG00000018763 RLG00000018764 RLG00000018909 RLG00000023051 RLG00000023566 RLG00000023567 RLG00000024838 RLG00000033855
rosa_multiflora Rmu_co8085188.1_g000001 Rmu_co8205198.1_g000001 Rmu_co8353999.1_g000001 Rmu_co8377151.1_g000001 Rmu_sc0000014.1_g000002 Rmu_sc0000023.1_g000002 Rmu_sc0000037.1_g000008 Rmu_sc0000087.1_g000004 Rmu_sc0000186.1_g000024 Rmu_sc0000218.1_g000015 Rmu_sc0000218.1_g000018 Rmu_sc0000270.1_g000005 Rmu_sc0000305.1_g000010 Rmu_sc0000305.1_g000012 Rmu_sc0000420.1_g000046 Rmu_sc0000431.1_g000018 Rmu_sc0000431.1_g000020 Rmu_sc0000549.1_g000001 Rmu_sc0000570.1_g000016 Rmu_sc0000600.1_g000007 Rmu_sc0000600.1_g000026 Rmu_sc0000712.1_g000001 Rmu_sc0000712.1_g000002 Rmu_sc0000718.1_g000039 Rmu_sc0000727.1_g000005 Rmu_sc0000765.1_g000034 Rmu_sc0000765.1_g000037 Rmu_sc0000776.1_g000058 Rmu_sc0000820.1_g000002 Rmu_sc0000820.1_g000004 Rmu_sc0000846.1_g000005 Rmu_sc0000846.1_g000006 Rmu_sc0000846.1_g000007 Rmu_sc0000851.1_g000002 Rmu_sc0000870.1_g000062 Rmu_sc0000982.1_g000022 Rmu_sc0000982.1_g000023 Rmu_sc0001035.1_g000073 Rmu_sc0001167.1_g000011 Rmu_sc0001167.1_g000012 Rmu_sc0001630.1_g000018 Rmu_sc0001970.1_g000016 Rmu_sc0001998.1_g000015 Rmu_sc0001998.1_g000016 Rmu_sc0002009.1_g000012 Rmu_sc0002129.1_g000044 Rmu_sc0002321.1_g000002 Rmu_sc0002344.1_g000012 Rmu_sc0002495.1_g000012 Rmu_sc0002498.1_g000013 Rmu_sc0002538.1_g000018 Rmu_sc0002538.1_g000019 Rmu_sc0002592.1_g000006 Rmu_sc0002648.1_g000001 Rmu_sc0002648.1_g000003 Rmu_sc0002691.1_g000041 Rmu_sc0002965.1_g000009 Rmu_sc0002965.1_g000010 Rmu_sc0002965.1_g000011 Rmu_sc0003070.1_g000014 Rmu_sc0003070.1_g000015 Rmu_sc0003131.1_g000017 Rmu_sc0003275.1_g000006 Rmu_sc0003275.1_g000074 Rmu_sc0003337.1_g000005 Rmu_sc0003368.1_g000056 Rmu_sc0003368.1_g000057 Rmu_sc0003402.1_g000019 Rmu_sc0003417.1_g000015 Rmu_sc0003499.1_g000010 Rmu_sc0004192.1_g000018 Rmu_sc0004277.1_g000054 Rmu_sc0004277.1_g000069 Rmu_sc0004277.1_g000070 Rmu_sc0004277.1_g000078 Rmu_sc0004277.1_g000079 Rmu_sc0004371.1_g000006 Rmu_sc0004371.1_g000007 Rmu_sc0004413.1_g000034 Rmu_sc0004542.1_g000014 Rmu_sc0004542.1_g000015 Rmu_sc0004657.1_g000010 Rmu_sc0004657.1_g000011 Rmu_sc0004657.1_g000012 Rmu_sc0004657.1_g000013 Rmu_sc0004663.1_g000004 Rmu_sc0004663.1_g000005 Rmu_sc0004929.1_g000003 Rmu_sc0005261.1_g000011 Rmu_sc0005261.1_g000012 Rmu_sc0005416.1_g000035 Rmu_sc0005416.1_g000036 Rmu_sc0005570.1_g000004 Rmu_sc0005704.1_g000003 Rmu_sc0005816.1_g000012 Rmu_sc0006076.1_g000003 Rmu_sc0006413.1_g000003 Rmu_sc0006720.1_g000003 Rmu_sc0006720.1_g000004 Rmu_sc0006841.1_g000003 Rmu_sc0006854.1_g000003 Rmu_sc0006854.1_g000011 Rmu_sc0006999.1_g000007 Rmu_sc0007089.1_g000001 Rmu_sc0007337.1_g000004 Rmu_sc0007415.1_g000032 Rmu_sc0007650.1_g000005 Rmu_sc0007754.1_g000002 Rmu_sc0007769.1_g000009 Rmu_sc0007927.1_g000001 Rmu_sc0008004.1_g000007 Rmu_sc0009016.1_g000001 Rmu_sc0009780.1_g000012 Rmu_sc0009780.1_g000013 Rmu_sc0009780.1_g000014 Rmu_sc0010190.1_g000001 Rmu_sc0010296.1_g000001 Rmu_sc0010546.1_g000006 Rmu_sc0010546.1_g000007 Rmu_sc0010647.1_g000001 Rmu_sc0010824.1_g000010 Rmu_sc0011876.1_g000001 Rmu_sc0012140.1_g000003 Rmu_sc0012140.1_g000005 Rmu_sc0012140.1_g000006 Rmu_sc0012262.1_g000001 Rmu_sc0013071.1_g000006 Rmu_sc0013071.1_g000007 Rmu_sc0013071.1_g000008 Rmu_sc0013354.1_g000002 Rmu_sc0013354.1_g000003 Rmu_sc0013389.1_g000002 Rmu_sc0014685.1_g000003 Rmu_sc0015011.1_g000003 Rmu_sc0015011.1_g000004 Rmu_sc0015307.1_g000001 Rmu_sc0015460.1_g000001 Rmu_sc0015460.1_g000002 Rmu_sc0017535.1_g000001 Rmu_sc0018333.1_g000004 Rmu_sc0018377.1_g000008 Rmu_sc0019962.1_g000002 Rmu_sc0025773.1_g000001 Rmu_sc0026446.1_g000004 Rmu_sc0026446.1_g000005 Rmu_sc0026770.1_g000001 Rmu_sc0029653.1_g000001 Rmu_sc0032235.1_g000001 Rmu_sc0035435.1_g000001 Rmu_sc0040849.1_g000001 Rmu_sc0041165.1_g000002 Rmu_ssc0000097.1_g000001 Rmu_ssc0000158.1_g000008
rosa_roxburghii Rroxscaffold_1G00003180 Rroxscaffold_1G00014990 Rroxscaffold_1G00031600 Rroxscaffold_1G00031960 Rroxscaffold_2G00120220 Rroxscaffold_2G00120230 Rroxscaffold_2G00123940 Rroxscaffold_2G00134410 Rroxscaffold_2G00134420 Rroxscaffold_3G00221900 Rroxscaffold_3G00239940 Rroxscaffold_3G00248690 Rroxscaffold_3G00259120 Rroxscaffold_5G00350510 Rroxscaffold_5G00363830 Rroxscaffold_5G00363840 Rroxscaffold_7G00171890 Rroxscaffold_7G00198160 Rroxscaffold_7G00201770
rosa_rugosa Rorug01G0087900 Rorug02G0158000 Rorug02G0158100 Rorug02G0248200 Rorug03G0171600 Rorug03G0202300 Rorug03G0339100 Rorug04G0085900 Rorug04G0086000.1 Rorug04G0086100 Rorug04G0343400 Rorug05G0027800 Rorug05G0251900 Rorug05G0253200 Rorug06G0297700 Rorug06G0480200 Rorug06G0480300 Rorug06G0501600
rosa_samantha Rh1AG154200 Rh1AG216100 Rh1CG145000 Rh1CG200400 Rh2BG220200 Rh2BG527400 Rh2BG527500 Rh2BG604600 Rh2DG075500 Rh2DG216000 Rh2DG536600 Rh2DG536700 Rh2DG586800 Rh3AG320200 Rh4AG012200 Rh4AG146000 Rh4AG233300 Rh4AG235900 Rh4AG346500 Rh4BG236200 Rh4CG152600 Rh4CG247900 Rh4DG232100 Rh5AG186900 Rh5AG187000 Rh5BG378900 Rh6AG073400 Rh6AG091000 Rh6AG091100 Rh6AG173800 Rh6AG404000 Rh6BG267600 Rh6BG282900
rosa_wichuraiana Rw1G011850 Rw4G020080 Rw5G049480 Rw6G014800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
AccB7I CCANNNNNTGG 1 cut(s) 394
AccBSI CCGCTC 1 cut(s) 70
AccI GTMKAC 3 cut(s) 96, 1436, 1473
AccII CGCG 2 cut(s) 85, 114
AciI CCGC 9 cut(s) 51, 57, 68, 85, 248, 279, 371, 857, 1354
AclWI GGATC 2 cut(s) 98, 533
AcoI YGGCCR 4 cut(s) 245, 258, 546, 1355
AcsI RAATTY 1 cut(s) 1498
AcuI CTGAAG 2 cut(s) 186, 1415
AcyI GRCGYC 2 cut(s) 153, 192
AfaI GTAC 5 cut(s) 506, 635, 641, 965, 1381
AfeI AGCGCT 1 cut(s) 1311
AfiI CCNNNNNNNGG 6 cut(s) 84, 87, 333, 394, 1157, 1211
AflII CTTAAG 1 cut(s) 1513
AgsI TTSAA 5 cut(s) 226, 559, 1087, 1116, 1252
AhdI GACNNNNNGTC 1 cut(s) 1136
AhlI ACTAGT 1 cut(s) 772
AjiI CACGTC 1 cut(s) 243
AjnI CCWGG 7 cut(s) 387, 454, 1162, 1178, 1280, 1295, 1602
AluBI AGCT 8 cut(s) 121, 383, 588, 601, 656, 983, 989, 1340
AluI AGCT 8 cut(s) 121, 383, 588, 601, 656, 983, 989, 1340
Alw21I GWGCWC 1 cut(s) 669
Alw26I GTCTC 1 cut(s) 314
Alw44I GTGCAC 1 cut(s) 665
AlwI GGATC 2 cut(s) 98, 533
AlwNI CAGNNNCTG 1 cut(s) 992
Aor51HI AGCGCT 1 cut(s) 1311
ApaLI GTGCAC 1 cut(s) 665
ApoI RAATTY 1 cut(s) 1498
ArsI GACNNNNNNTTYG 2 cut(s) 606, 638
AspLEI GCGC 3 cut(s) 114, 145, 1312
AspS9I GGNCC 6 cut(s) 532, 608, 1160, 1244, 1259, 1303
AsuC2I CCSGG 2 cut(s) 766, 1539
AsuHPI GGTGA 3 cut(s) 202, 872, 1112
AvaII GGWCC 3 cut(s) 608, 1259, 1303
BaeGI GKGCMC 2 cut(s) 8, 669
BalI TGGCCA 2 cut(s) 260, 548
BanII GRGCYC 1 cut(s) 1083
Bbv12I GWGCWC 1 cut(s) 669
BbvCI CCTCAGC 2 cut(s) 173, 657
BccI CCATC 8 cut(s) 203, 418, 538, 800, 818, 1213, 1415, 1496
BceAI ACGGC 3 cut(s) 140, 266, 1465
BcgI CGANNNNNNTGC 2 cut(s) 1436, 1470
BciT130I CCWGG 7 cut(s) 389, 456, 1164, 1180, 1282, 1297, 1604
BclI TGATCA 1 cut(s) 1342
BcnI CCSGG 2 cut(s) 766, 1539
BcoDI GTCTC 1 cut(s) 314
BcuI ACTAGT 1 cut(s) 772
BfaI CTAG 7 cut(s) 402, 773, 890, 980, 1307, 1349, 1466
BfmI CTRYAG 4 cut(s) 317, 984, 1124, 1455
BfoI RGCGCY 1 cut(s) 1313
BfrI CTTAAG 1 cut(s) 1513
BmcAI AGTACT 1 cut(s) 506
Bme1390I CCNGG 9 cut(s) 389, 456, 766, 1164, 1180, 1282, 1297, 1539, 1604
Bme18I GGWCC 3 cut(s) 608, 1259, 1303
BmeRI GACNNNNNGTC 1 cut(s) 1136
BmgBI CACGTC 1 cut(s) 243
BmgT120I GGNCC 6 cut(s) 532, 608, 1160, 1244, 1259, 1303
BmiI GGNNCC 6 cut(s) 610, 902, 943, 1245, 1260, 1279
BmrFI CCNGG 9 cut(s) 389, 456, 766, 1164, 1180, 1282, 1297, 1539, 1604
BmrI ACTGGG 1 cut(s) 145
BmsI GCATC 2 cut(s) 154, 1210
BmuI ACTGGG 1 cut(s) 145
BpmI CTGGAG 3 cut(s) 1296, 1462, 1586
Bpu10I CCTNAGC 3 cut(s) 173, 657, 734
BpuEI CTTGAG 1 cut(s) 610
BpuMI CCSGG 2 cut(s) 766, 1539
Bsa29I ATCGAT 1 cut(s) 363
BsaHI GRCGYC 2 cut(s) 153, 192
BsaJI CCNNGG 5 cut(s) 217, 406, 1156, 1281, 1537
BsaXI ACNNNNNCTCC 4 cut(s) 182, 212, 338, 368
Bsc4I CCNNNNNNNGG 6 cut(s) 84, 87, 333, 394, 1157, 1211
Bse1I ACTGG 6 cut(s) 140, 438, 746, 794, 1094, 1479
Bse3DI GCAATG 2 cut(s) 327, 481
BseBI CCWGG 7 cut(s) 389, 456, 1164, 1180, 1282, 1297, 1604
BseCI ATCGAT 1 cut(s) 363
BseDI CCNNGG 5 cut(s) 217, 406, 1156, 1281, 1537
BseGI GGATG 4 cut(s) 829, 1201, 1205, 1292
BseLI CCNNNNNNNGG 6 cut(s) 84, 87, 333, 394, 1157, 1211
BseMI GCAATG 2 cut(s) 327, 481
BseMII CTCAG 7 cut(s) 187, 554, 648, 684, 698, 1283, 1425
BseNI ACTGG 6 cut(s) 140, 438, 746, 794, 1094, 1479
BseRI GAGGAG 4 cut(s) 8, 17, 70, 666
BseSI GKGCMC 2 cut(s) 8, 669
BseYI CCCAGC 1 cut(s) 332
Bsh1236I CGCG 2 cut(s) 85, 114
BshVI ATCGAT 1 cut(s) 363
BsiHKAI GWGCWC 1 cut(s) 669
BsiSI CCGG 2 cut(s) 765, 1539
BslFI GGGAC 3 cut(s) 512, 1415, 1578
BslI CCNNNNNNNGG 6 cut(s) 84, 87, 333, 394, 1157, 1211
BsmAI GTCTC 1 cut(s) 314
BsmFI GGGAC 3 cut(s) 512, 1415, 1578
Bsp1286I GDGCHC 3 cut(s) 8, 669, 1083
Bsp1407I TGTACA 1 cut(s) 1379
Bsp143I GATC 5 cut(s) 90, 364, 517, 525, 1342
BspACI CCGC 9 cut(s) 51, 57, 68, 85, 248, 279, 371, 857, 1354
BspCNI CTCAG 7 cut(s) 186, 553, 649, 683, 699, 1282, 1424
BspDI ATCGAT 1 cut(s) 363
BspFNI CGCG 2 cut(s) 85, 114
BspLI GGNNCC 6 cut(s) 610, 902, 943, 1245, 1260, 1279
BspMAI CTGCAG 4 cut(s) 321, 988, 1128, 1459
BspPI GGATC 2 cut(s) 98, 533
BspTI CTTAAG 1 cut(s) 1513
BsrBI CCGCTC 1 cut(s) 70
BsrDI GCAATG 2 cut(s) 327, 481
BsrGI TGTACA 1 cut(s) 1379
BsrI ACTGG 6 cut(s) 140, 438, 746, 794, 1094, 1479
BssECI CCNNGG 5 cut(s) 217, 406, 1156, 1281, 1537
BssMI GATC 5 cut(s) 90, 364, 517, 525, 1342
BssNI GRCGYC 2 cut(s) 153, 192
BssT1I CCWWGG 2 cut(s) 406, 1156
Bst2UI CCWGG 7 cut(s) 389, 456, 1164, 1180, 1282, 1297, 1604
Bst4CI ACNGT 3 cut(s) 289, 1366, 1573
Bst6I CTCTTC 2 cut(s) 48, 863
BstACI GRCGYC 2 cut(s) 153, 192
BstAFI CTTAAG 1 cut(s) 1513
BstAUI TGTACA 1 cut(s) 1379
BstC8I GCNNGC 7 cut(s) 123, 127, 179, 452, 813, 1359, 1587
BstDEI CTNAG 8 cut(s) 173, 540, 657, 670, 707, 734, 1269, 1411
BstENI CCTNNNNNAGG 1 cut(s) 1155
BstF5I GGATG 4 cut(s) 829, 1201, 1205, 1292
BstFNI CGCG 2 cut(s) 85, 114
BstH2I RGCGCY 1 cut(s) 1313
BstHHI GCGC 3 cut(s) 114, 145, 1312
BstKTI GATC 5 cut(s) 93, 367, 520, 528, 1345
BstMAI GTCTC 1 cut(s) 314
BstMBI GATC 5 cut(s) 90, 364, 517, 525, 1342
BstMWI GCNNNNNNNGC 6 cut(s) 59, 118, 161, 228, 244, 989
BstNI CCWGG 7 cut(s) 389, 456, 1164, 1180, 1282, 1297, 1604
BstNSI RCATGY 1 cut(s) 646
BstSCI CCNGG 9 cut(s) 387, 454, 764, 1162, 1178, 1280, 1295, 1537, 1602
BstSFI CTRYAG 4 cut(s) 317, 984, 1124, 1455
BstSLI GKGCMC 2 cut(s) 8, 669
BstUI CGCG 2 cut(s) 85, 114
BstXI CCANNNNNNTGG 2 cut(s) 577, 845
Bsu15I ATCGAT 1 cut(s) 363
BsuTUI ATCGAT 1 cut(s) 363
BtrI CACGTC 1 cut(s) 243
BtsCI GGATG 4 cut(s) 829, 1201, 1205, 1292
BtsI GCAGTG 2 cut(s) 669, 1452
BtsIMutI CAGTG 4 cut(s) 285, 669, 787, 1452
Cac8I GCNNGC 7 cut(s) 123, 127, 179, 452, 813, 1359, 1587
CaiI CAGNNNCTG 1 cut(s) 992
CfoI GCGC 3 cut(s) 114, 145, 1312
Cfr13I GGNCC 6 cut(s) 532, 608, 1160, 1244, 1259, 1303
ClaI ATCGAT 1 cut(s) 363
CseI GACGC 3 cut(s) 161, 200, 220
Csp6I GTAC 5 cut(s) 505, 634, 640, 964, 1380
CviAII CATG 6 cut(s) 583, 643, 816, 1063, 1240, 1263
CviQI GTAC 5 cut(s) 505, 634, 640, 964, 1380
DdeI CTNAG 8 cut(s) 173, 540, 657, 670, 707, 734, 1269, 1411
DpnI GATC 5 cut(s) 92, 366, 519, 527, 1344
DpnII GATC 5 cut(s) 90, 364, 517, 525, 1342
DrdI GACNNNNNNGTC 1 cut(s) 158
DriI GACNNNNNGTC 1 cut(s) 1136
DseDI GACNNNNNNGTC 1 cut(s) 158
EaeI YGGCCR 4 cut(s) 245, 258, 546, 1355
Eam1104I CTCTTC 2 cut(s) 48, 863
Eam1105I GACNNNNNGTC 1 cut(s) 1136
EarI CTCTTC 2 cut(s) 48, 863
Eco130I CCWWGG 2 cut(s) 406, 1156
Eco147I AGGCCT 2 cut(s) 171, 1215
Eco24I GRGCYC 1 cut(s) 1083
Eco47I GGWCC 3 cut(s) 608, 1259, 1303
Eco47III AGCGCT 1 cut(s) 1311
Eco57I CTGAAG 2 cut(s) 186, 1415
EcoNI CCTNNNNNAGG 1 cut(s) 1155
EcoO109I RGGNCCY 3 cut(s) 532, 608, 1303
EcoRII CCWGG 7 cut(s) 387, 454, 1162, 1178, 1280, 1295, 1602
EcoT14I CCWWGG 2 cut(s) 406, 1156
EcoT38I GRGCYC 1 cut(s) 1083
ErhI CCWWGG 2 cut(s) 406, 1156
FaeI CATG 6 cut(s) 586, 646, 819, 1066, 1243, 1266
FaqI GGGAC 3 cut(s) 512, 1415, 1578
FatI CATG 6 cut(s) 582, 642, 815, 1062, 1239, 1262
FauI CCCGC 1 cut(s) 850
FbaI TGATCA 1 cut(s) 1342
FblI GTMKAC 3 cut(s) 96, 1436, 1473
FokI GGATG 4 cut(s) 836, 1188, 1192, 1279
FriOI GRGCYC 1 cut(s) 1083
FspBI CTAG 7 cut(s) 402, 773, 890, 980, 1307, 1349, 1466
GlaI GCGC 3 cut(s) 113, 144, 1311
GsaI CCCAGC 1 cut(s) 336
GsuI CTGGAG 3 cut(s) 1296, 1462, 1586
HaeII RGCGCY 1 cut(s) 1313
HapII CCGG 2 cut(s) 765, 1539
HgaI GACGC 3 cut(s) 161, 200, 220
HhaI GCGC 3 cut(s) 114, 145, 1312
Hin1I GRCGYC 2 cut(s) 153, 192
Hin1II CATG 6 cut(s) 586, 646, 819, 1066, 1243, 1266
Hin6I GCGC 3 cut(s) 112, 143, 1310
HinP1I GCGC 3 cut(s) 112, 143, 1310
HincII GTYRAC 3 cut(s) 97, 931, 1609
HindII GTYRAC 3 cut(s) 97, 931, 1609
HindIII AAGCTT 1 cut(s) 381
HinfI GANTC 9 cut(s) 13, 269, 307, 323, 1021, 1131, 1236, 1415, 1475
HpaII CCGG 2 cut(s) 765, 1539
HphI GGTGA 3 cut(s) 202, 872, 1112
Hpy166II GTNNAC 7 cut(s) 97, 133, 667, 931, 1437, 1474, 1609
Hpy188I TCNGA 5 cut(s) 306, 314, 543, 805, 1414
Hpy188III TCNNGA 4 cut(s) 149, 1045, 1084, 1275
Hpy8I GTNNAC 7 cut(s) 97, 133, 667, 931, 1437, 1474, 1609
Hpy99I CGWCG 7 cut(s) 98, 101, 155, 161, 164, 194, 1451
HpyAV CCTTC 4 cut(s) 161, 1232, 1294, 1439
HpyCH4III ACNGT 3 cut(s) 289, 1366, 1573
HpyCH4IV ACGT 2 cut(s) 242, 551
HpyF10VI GCNNNNNNNGC 6 cut(s) 59, 118, 161, 228, 244, 989
HpyF3I CTNAG 8 cut(s) 173, 540, 657, 670, 707, 734, 1269, 1411
HpySE526I ACGT 2 cut(s) 242, 551
Hsp92I GRCGYC 2 cut(s) 153, 192
Hsp92II CATG 6 cut(s) 586, 646, 819, 1066, 1243, 1266
HspAI GCGC 3 cut(s) 112, 143, 1310
Ksp22I TGATCA 1 cut(s) 1342
Kzo9I GATC 5 cut(s) 90, 364, 517, 525, 1342
LmnI GCTCC 2 cut(s) 653, 1277
LweI GCATC 2 cut(s) 154, 1210
MaeI CTAG 7 cut(s) 402, 773, 890, 980, 1307, 1349, 1466
MaeII ACGT 2 cut(s) 242, 551
MaeIII GTNAC 5 cut(s) 283, 1481, 1492, 1532, 1573
MalI GATC 5 cut(s) 92, 366, 519, 527, 1344
MbiI CCGCTC 1 cut(s) 70
MboI GATC 5 cut(s) 90, 364, 517, 525, 1342
MboII GAAGA 4 cut(s) 35, 359, 638, 880
MhlI GDGCHC 3 cut(s) 8, 669, 1083
MlsI TGGCCA 2 cut(s) 260, 548
MluCI AATT 6 cut(s) 1093, 1111, 1374, 1390, 1421, 1498
MluNI TGGCCA 2 cut(s) 260, 548
MlyI GAGTC 7 cut(s) 7, 263, 316, 332, 1015, 1125, 1469
MmeI TCCRAC 2 cut(s) 1009, 1213
Mox20I TGGCCA 2 cut(s) 260, 548
MscI TGGCCA 2 cut(s) 260, 548
MseI TTAA 5 cut(s) 377, 510, 968, 1314, 1514
MslI CAYNNNNRTG 1 cut(s) 792
Msp20I TGGCCA 2 cut(s) 260, 548
MspA1I CMGCKG 3 cut(s) 59, 373, 989
MspCI CTTAAG 1 cut(s) 1513
MspI CCGG 2 cut(s) 765, 1539
MspR9I CCNGG 9 cut(s) 389, 456, 766, 1164, 1180, 1282, 1297, 1539, 1604
MvaI CCWGG 7 cut(s) 389, 456, 1164, 1180, 1282, 1297, 1604
MvnI CGCG 2 cut(s) 85, 114
MwoI GCNNNNNNNGC 6 cut(s) 59, 118, 161, 228, 244, 989
NciI CCSGG 2 cut(s) 766, 1539
NdeII GATC 5 cut(s) 90, 364, 517, 525, 1342
NlaIII CATG 6 cut(s) 586, 646, 819, 1066, 1243, 1266
NlaIV GGNNCC 6 cut(s) 610, 902, 943, 1245, 1260, 1279
NmeAIII GCCGAG 2 cut(s) 198, 672
NmuCI GTSAC 3 cut(s) 283, 1492, 1532
NspI RCATGY 1 cut(s) 646
PceI AGGCCT 2 cut(s) 171, 1215
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 156
PfeI GAWTC 2 cut(s) 1236, 1415
PflFI GACNNNGTC 1 cut(s) 155
PflMI CCANNNNNTGG 1 cut(s) 394
PfoI TCCNGGA 4 cut(s) 387, 764, 1178, 1295
PleI GAGTC 7 cut(s) 7, 263, 315, 331, 1015, 1125, 1469
PpsI GAGTC 7 cut(s) 7, 263, 315, 331, 1015, 1125, 1469
PpuMI RGGWCCY 2 cut(s) 608, 1303
Psp5II RGGWCCY 2 cut(s) 608, 1303
Psp6I CCWGG 7 cut(s) 387, 454, 1162, 1178, 1280, 1295, 1602
PspFI CCCAGC 1 cut(s) 332
PspGI CCWGG 7 cut(s) 387, 454, 1162, 1178, 1280, 1295, 1602
PspN4I GGNNCC 6 cut(s) 610, 902, 943, 1245, 1260, 1279
PspPI GGNCC 6 cut(s) 532, 608, 1160, 1244, 1259, 1303
PspPPI RGGWCCY 2 cut(s) 608, 1303
PstI CTGCAG 4 cut(s) 321, 988, 1128, 1459
PstNI CAGNNNCTG 1 cut(s) 992
PsyI GACNNNGTC 1 cut(s) 155
PvuII CAGCTG 1 cut(s) 989
RsaI GTAC 5 cut(s) 506, 635, 641, 965, 1381
RsaNI GTAC 5 cut(s) 505, 634, 640, 964, 1380
RseI CAYNNNNRTG 1 cut(s) 792
SalI GTCGAC 1 cut(s) 95
SaqAI TTAA 5 cut(s) 377, 510, 968, 1314, 1514
Sau3AI GATC 5 cut(s) 90, 364, 517, 525, 1342
Sau96I GGNCC 6 cut(s) 532, 608, 1160, 1244, 1259, 1303
ScaI AGTACT 1 cut(s) 506
SchI GAGTC 7 cut(s) 7, 263, 316, 332, 1015, 1125, 1469
ScrFI CCNGG 9 cut(s) 389, 456, 766, 1164, 1180, 1282, 1297, 1539, 1604
SduI GDGCHC 3 cut(s) 8, 669, 1083
SfaNI GCATC 2 cut(s) 154, 1210
SfcI CTRYAG 4 cut(s) 317, 984, 1124, 1455
SgrDI CGTCGACG 1 cut(s) 95
SinI GGWCC 3 cut(s) 608, 1259, 1303
SmiMI CAYNNNNRTG 1 cut(s) 792
SmlI CTYRAG 2 cut(s) 589, 1513
SmoI CTYRAG 2 cut(s) 589, 1513
SpeI ACTAGT 1 cut(s) 772
Sse9I AATT 6 cut(s) 1093, 1111, 1374, 1390, 1421, 1498
SseBI AGGCCT 2 cut(s) 171, 1215
SsiI CCGC 9 cut(s) 51, 57, 68, 85, 248, 279, 371, 857, 1354
SspMI CTAG 7 cut(s) 402, 773, 890, 980, 1307, 1349, 1466
StuI AGGCCT 2 cut(s) 171, 1215
StyD4I CCNGG 9 cut(s) 387, 454, 764, 1162, 1178, 1280, 1295, 1537, 1602
StyI CCWWGG 2 cut(s) 406, 1156
TaaI ACNGT 3 cut(s) 289, 1366, 1573
TaiI ACGT 2 cut(s) 245, 554
TaqI TCGA 5 cut(s) 96, 150, 189, 363, 624
TasI AATT 6 cut(s) 1093, 1111, 1374, 1390, 1421, 1498
TatI WGTACW 2 cut(s) 504, 1379
TauI GCSGC 4 cut(s) 70, 250, 281, 1357
TfiI GAWTC 2 cut(s) 1236, 1415
Tru1I TTAA 5 cut(s) 377, 510, 968, 1314, 1514
Tru9I TTAA 5 cut(s) 377, 510, 968, 1314, 1514
TscAI CASTG 4 cut(s) 292, 669, 794, 1459
TseFI GTSAC 3 cut(s) 283, 1492, 1532
Tsp45I GTSAC 3 cut(s) 283, 1492, 1532
TspDTI ATGAA 3 cut(s) 1079, 1228, 1281
TspGWI ACGGA 1 cut(s) 1097
TspRI CASTG 4 cut(s) 292, 669, 794, 1459
Tth111I GACNNNGTC 1 cut(s) 155
Van91I CCANNNNNTGG 1 cut(s) 394
Vha464I CTTAAG 1 cut(s) 1513
VneI GTGCAC 1 cut(s) 665
VpaK11BI GGWCC 3 cut(s) 608, 1259, 1303
XagI CCTNNNNNAGG 1 cut(s) 1155
XapI RAATTY 1 cut(s) 1498
XceI RCATGY 1 cut(s) 646
XmiI GTMKAC 3 cut(s) 96, 1436, 1473
XspI CTAG 7 cut(s) 402, 773, 890, 980, 1307, 1349, 1466
ZrmI AGTACT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.