Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000293

Physical Location & Seq

Genomic Coordinates Forward (+)

12017883 .. 12021245

Gene Structure 3363 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g18740.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGGGGAGCAGAGCCACAACAACCTTCACCACCACCACCACCGCGCCACCGCCTCGTCCTCCTCCGCTGCTGCTCGACTTGGTCTCGGGATAAGAACCACTACATCTTCCTCCACGGCCAGCGAGATCGTGGAGGCTCGCGGGGGCCACATTATAAGAGCCACCGGCCGGAAAGACCGCCACAGCAAGGTCTGCACCGCCAAAGGCCCCAGGGACCGCCGCGTCCGCCTCGCCGCCCACACCGCCATTCAATTCTACGACGTCCAGGACCGGTTGGGATACGACCGCCCCAGCAAGGCCGTCGATTGGCTCATCAAGAAAGCCAAAGCCGCCATCGACGAGCTCGACGAGCTGCCGCCGTGGAACCCGAACTCAATTTCCGTCCAGACTTCAGCTTCTCCGACTGCGCCGCCGACTTCCGCGGCGCAAGAAACGCAGAACAACTCGAGCCTCCATTTCTCGATGGTGGAGGCTCCGAGTTCGTTGTCTGCTAATCGGAGAGCTTCAATGGTGGGTAGCGGCGTGGCGGAGCTTGTGAATCAAAACAGCTCGAATTTTCTGCCACCGTCGATGGACTCCGACTCAATCGCAGATACTATTAAGTCTTTCTTCCCAATGGGTGCGGCAACGACGGCAGAAACGCCGTCGTTCCACCCGAGCTATCCGCCGGATTTGCTGTCGAGAACCAGCAGCCAGAGCCAAGATCTAAGATTGTCTCTTCATTCTTTTCAAGACCCAATTCTTCTTCACCACCACCAAGCTCATCAGCATCAGACCCATCACCAAAATGAGCAGACTTTCCTAACCCCAAACCCTCTCGGGTTCGACAGCTCCGCCGCCACGTGGACAGAGCAGCACCACCAGCAGCAGCAGCAGGCGGAGCTCAACAGGTTCCAGAGAATGCTGGCTTGGAGTAATGCCGGTGGTGGCGATAGTAACAACAACAACAACAACAACAGCGGCGGTGGAGGTGGTGGGTTTACGTTCAACTCGCTACCGCTGAGTCAGTCACAGTCGCCGACGCTGCAGCCGTTCTTGTTCGGCCAAAACCAGTTCTTTTCATCACAGAGGGGACCCCTTCAGTCCAGTAACGCGCCTTCGGTTCATGCCTGGATAGACCACAACGACCTTTCGGACCATCAACATCAGATGGCGCCGTCAATGCATAACCATCATCATCAACAGTCTTCCATTTCCGGCATGGGATTCGCCTCCGGCGTATTCCCCGGCTTCCACATTCCGGCAAGAATCCAGGGCGAGGAGGAGCACGACGGCATCTCCGACAAGCCGTCCTCTGCTTCCTCCAATTCTCGCCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040034 GO:0042221 GO:0045962 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

440

Amino Acids

47.79

Weight (kDa)

6.69

Isoelectric Point (pI)

57.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	56 - 148	7.3e-30	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53230 AT1G53230 AT3G15030 AT3G15030 AT3G15030 AT3G15030
fragaria_vesca	FvH4_3g08160 FvH4_3g18740
malus_domestica	MD03G1239100.v1.1 MD05G1305100.v1.1 MD11G1258900.v1.1
prunus_persica	Prupe.4G057100_v2.0.a1 Prupe.4G171100_v2.0.a1
pyrus_communis	pycom03g18430 pycom11g22850
rosa_chinensis	RchiOBHm_Chr4g0418991 RchiOBHm_Chr4g0420791 RchiOBHm_Chr5g0010031 RchiOBHm_Chr5g0031541
rosa_laevigata	RLG00000013430 RLG00000015337 RLG00000031720 RLG00000033322 RLG00000035733
rosa_multiflora	Rmu_co8053810.1_g000001 Rmu_co8138760.1_g000001 Rmu_co8175406.1_g000001 Rmu_co8265597.1_g000001 Rmu_sc0000090.1_g000007 Rmu_sc0000115.1_g000024 Rmu_sc0000288.1_g000014 Rmu_sc0000324.1_g000023 Rmu_sc0000423.1_g000011 Rmu_sc0000438.1_g000001 Rmu_sc0000516.1_g000051 Rmu_sc0000524.1_g000034 Rmu_sc0000530.1_g000034 Rmu_sc0000550.1_g000022 Rmu_sc0000631.1_g000026 Rmu_sc0000861.1_g000047 Rmu_sc0000861.1_g000062 Rmu_sc0001036.1_g000040 Rmu_sc0001258.1_g000009 Rmu_sc0001353.1_g000029 Rmu_sc0001374.1_g000048 Rmu_sc0001426.1_g000012 Rmu_sc0001526.1_g000046 Rmu_sc0001684.1_g000011 Rmu_sc0001689.1_g000026 Rmu_sc0001706.1_g000025 Rmu_sc0002017.1_g000004 Rmu_sc0002060.1_g000008 Rmu_sc0002260.1_g000006 Rmu_sc0002275.1_g000007 Rmu_sc0002340.1_g000004 Rmu_sc0003556.1_g000029 Rmu_sc0003610.1_g000044 Rmu_sc0003690.1_g000002 Rmu_sc0004189.1_g000026 Rmu_sc0004250.1_g000041 Rmu_sc0004435.1_g000005 Rmu_sc0004621.1_g000008 Rmu_sc0004947.1_g000031 Rmu_sc0004972.1_g000008 Rmu_sc0005791.1_g000017 Rmu_sc0005812.1_g000007 Rmu_sc0006170.1_g000002 Rmu_sc0006297.1_g000003 Rmu_sc0006435.1_g000006 Rmu_sc0006455.1_g000002 Rmu_sc0006792.1_g000018 Rmu_sc0007904.1_g000002 Rmu_sc0008081.1_g000008 Rmu_sc0008698.1_g000010 Rmu_sc0011940.1_g000008 Rmu_sc0012051.1_g000001 Rmu_sc0013001.1_g000012 Rmu_sc0017665.1_g000008 Rmu_sc0021290.1_g000002 Rmu_sc0023961.1_g000001 Rmu_sc0025647.1_g000001 Rmu_sc0030540.1_g000003 Rmu_sc0030935.1_g000001 Rmu_sc0030936.1_g000002 Rmu_sc0040629.1_g000001 Rmu_sc0040630.1_g000001 Rmu_ssc0000018.1_g000003 Rmu_ssc0000093.1_g000019 Rmu_ssc0000372.1_g000047 Rmu_ssc0000472.1_g000004
rosa_roxburghii	Rroxscaffold_1G00010400 Rroxscaffold_1G00048760 Rroxscaffold_1G00066140 Rroxscaffold_2G00087730 Rroxscaffold_2G00114360 Rroxscaffold_2G00129990 Rroxscaffold_5G00344710 Rroxscaffold_5G00356030 Rroxscaffold_5G00377440 Rroxscaffold_6G00391660 Rroxscaffold_7G00175440 Rroxscaffold_7G00190080 Rroxscaffold_7G00190400
rosa_rugosa	Rorug02G0056400 Rorug02G0133600 Rorug02G0314600 Rorug02G0407100 Rorug02G0623700 Rorug03G0182200.1 Rorug03G0369500.1 Rorug04G0335800 Rorug04G0422400.1 Rorug04G0448800 Rorug05G0127000 Rorug06G0289000 Rorug07G0333100
rosa_samantha	Rh5AG079500 Rh5CG086900 Rh5DG075000 Rh5DG240600 Rh6DG251700
rosa_wichuraiana	Rw5G007360 Rw5G020060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	155
AasI	GACNNNNNNGTC	1 cut(s)	221
AatII	GACGTC	1 cut(s)	264
AccB1I	GGYRCC	1 cut(s)	1153
AccII	CGCG	5 cut(s)	45, 141, 222, 422, 1094
AcoI	YGGCCR	3 cut(s)	117, 166, 1042
AcsI	RAATTY	1 cut(s)	553
AcuI	CTGAAG	2 cut(s)	375, 1064
AcvI	CACGTG	1 cut(s)	843
AcyI	GRCGYC	2 cut(s)	261, 1154
AfiI	CCNNNNNNNGG	7 cut(s)	168, 187, 295, 306, 843, 1240, 1258
AgeI	ACCGGT	1 cut(s)	270
AgsI	TTSAA	4 cut(s)	251, 507, 731, 988
AhdI	GACNNNNNGTC	1 cut(s)	1288
AjnI	CCWGG	4 cut(s)	209, 264, 1109, 1251
AjuI	GAANNNNNNNTTGG	2 cut(s)	892, 924
AloI	GAACNNNNNNTCC	2 cut(s)	362, 394
Alw21I	GWGCWC	3 cut(s)	345, 885, 1269
Alw26I	GTCTC	2 cut(s)	89, 720
Ama87I	CYCGRG	4 cut(s)	86, 445, 655, 818
AoxI	GGCC	6 cut(s)	117, 145, 166, 205, 297, 1042
ApoI	RAATTY	1 cut(s)	553
AsiGI	ACCGGT	1 cut(s)	270
AspLEI	GCGC	5 cut(s)	47, 409, 427, 1096, 1156
AspS9I	GGNCC	6 cut(s)	145, 206, 214, 268, 1073, 1135
AsuC2I	CCSGG	1 cut(s)	1227
AsuHPI	GGTGA	3 cut(s)	20, 740, 773
AvaI	CYCGRG	4 cut(s)	86, 445, 655, 818
AvaII	GGWCC	4 cut(s)	214, 268, 1073, 1135
BanI	GGYRCC	1 cut(s)	1153
BanII	GRGCYC	2 cut(s)	345, 885
BarI	GAAGNNNNNNTAC	2 cut(s)	1081, 1113
BbrPI	CACGTG	1 cut(s)	843
BbsI	GAAGAC	1 cut(s)	1179
Bbv12I	GWGCWC	3 cut(s)	345, 885, 1269
BccI	CCATC	7 cut(s)	341, 457, 565, 786, 1144, 1146, 1179
BceAI	ACGGC	9 cut(s)	132, 284, 343, 628, 648, 1015, 1141, 1273, 1288
BcgI	CGANNNNNNTGC	6 cut(s)	283, 317, 541, 575, 1189, 1223
BciT130I	CCWGG	4 cut(s)	211, 266, 1111, 1253
BciVI	GTATCC	1 cut(s)	272
BcnI	CCSGG	1 cut(s)	1227
BcoDI	GTCTC	2 cut(s)	89, 720
BfmI	CTRYAG	1 cut(s)	1025
BfoI	RGCGCY	1 cut(s)	1157
BfuI	GTATCC	1 cut(s)	272
BglII	AGATCT	1 cut(s)	703
Bme1390I	CCNGG	5 cut(s)	211, 266, 1111, 1227, 1253
Bme18I	GGWCC	4 cut(s)	214, 268, 1073, 1135
BmeRI	GACNNNNNGTC	1 cut(s)	1288
BmeT110I	CYCGRG	4 cut(s)	86, 445, 655, 818
BmgT120I	GGNCC	6 cut(s)	145, 206, 214, 268, 1073, 1135
BmiI	GGNNCC	9 cut(s)	146, 208, 215, 365, 474, 893, 1074, 1075, 1155
BmrFI	CCNGG	5 cut(s)	211, 266, 1111, 1227, 1253
BmsI	GCATC	2 cut(s)	778, 1284
BpiI	GAAGAC	1 cut(s)	1179
BpuMI	CCSGG	1 cut(s)	1227
BsaAI	YACGTR	1 cut(s)	843
BsaHI	GRCGYC	2 cut(s)	261, 1154
BsaI	GGTCTC	1 cut(s)	89
BsaJI	CCNNGG	7 cut(s)	114, 209, 210, 359, 420, 1225, 1252
BsaWI	WCCGGW	1 cut(s)	270
BsaXI	ACNNNNNCTCC	2 cut(s)	1262, 1292
Bsc4I	CCNNNNNNNGG	7 cut(s)	168, 187, 295, 306, 843, 1240, 1258
Bse118I	RCCGGY	3 cut(s)	164, 270, 920
Bse1I	ACTGG	2 cut(s)	1051, 1086
BseBI	CCWGG	4 cut(s)	211, 266, 1111, 1253
BseDI	CCNNGG	7 cut(s)	114, 209, 210, 359, 420, 1225, 1252
BseLI	CCNNNNNNNGG	7 cut(s)	168, 187, 295, 306, 843, 1240, 1258
BseMII	CTCAG	1 cut(s)	992
BseNI	ACTGG	2 cut(s)	1051, 1086
BseRI	GAGGAG	3 cut(s)	52, 1274, 1277
BseX3I	CGGCCG	1 cut(s)	166
BseYI	CCCAGC	1 cut(s)	290
BsgI	GTGCAG	1 cut(s)	178
Bsh1236I	CGCG	5 cut(s)	45, 141, 222, 422, 1094
Bsh1285I	CGRYCG	2 cut(s)	169, 286
BshFI	GGCC	6 cut(s)	119, 147, 168, 207, 299, 1044
BshNI	GGYRCC	1 cut(s)	1153
BshTI	ACCGGT	1 cut(s)	270
BsiEI	CGRYCG	2 cut(s)	169, 286
BsiHKAI	GWGCWC	3 cut(s)	345, 885, 1269
BsiHKCI	CYCGRG	4 cut(s)	86, 445, 655, 818
BsiSI	CCGG	9 cut(s)	165, 169, 271, 668, 921, 1197, 1215, 1227, 1241
BslFI	GGGAC	2 cut(s)	227, 1086
BslI	CCNNNNNNNGG	7 cut(s)	168, 187, 295, 306, 843, 1240, 1258
BsmAI	GTCTC	2 cut(s)	89, 720
BsmFI	GGGAC	2 cut(s)	227, 1086
BsmI	GAATGC	1 cut(s)	906
BsnI	GGCC	6 cut(s)	119, 147, 168, 207, 299, 1044
Bso31I	GGTCTC	1 cut(s)	89
BsoBI	CYCGRG	4 cut(s)	86, 445, 655, 818
Bsp1286I	GDGCHC	3 cut(s)	345, 885, 1269
Bsp143I	GATC	2 cut(s)	126, 703
BspANI	GGCC	6 cut(s)	119, 147, 168, 207, 299, 1044
BspCNI	CTCAG	1 cut(s)	993
BspFNI	CGCG	5 cut(s)	45, 141, 222, 422, 1094
BspLI	GGNNCC	9 cut(s)	146, 208, 215, 365, 474, 893, 1074, 1075, 1155
BspMAI	CTGCAG	1 cut(s)	1029
BspT107I	GGYRCC	1 cut(s)	1153
BspTNI	GGTCTC	1 cut(s)	89
BsrFI	RCCGGY	3 cut(s)	164, 270, 920
BsrI	ACTGG	2 cut(s)	1051, 1086
BssAI	RCCGGY	3 cut(s)	164, 270, 920
BssECI	CCNNGG	7 cut(s)	114, 209, 210, 359, 420, 1225, 1252
BssMI	GATC	2 cut(s)	126, 703
BssNI	GRCGYC	2 cut(s)	261, 1154
Bst2UI	CCWGG	4 cut(s)	211, 266, 1111, 1253
Bst4CI	ACNGT	3 cut(s)	567, 1014, 1185
Bst6I	CTCTTC	1 cut(s)	723
BstACI	GRCGYC	2 cut(s)	261, 1154
BstAPI	GCANNNNNTGC	1 cut(s)	192
BstBAI	YACGTR	1 cut(s)	843
BstC8I	GCNNGC	4 cut(s)	121, 139, 876, 906
BstDEI	CTNAG	2 cut(s)	707, 1001
BstDSI	CCRYGG	3 cut(s)	114, 359, 420
BstFNI	CGCG	5 cut(s)	45, 141, 222, 422, 1094
BstH2I	RGCGCY	1 cut(s)	1157
BstHHI	GCGC	5 cut(s)	47, 409, 427, 1096, 1156
BstKTI	GATC	2 cut(s)	129, 706
BstMAI	GTCTC	2 cut(s)	89, 720
BstMBI	GATC	2 cut(s)	126, 703
BstMCI	CGRYCG	2 cut(s)	169, 286
BstNI	CCWGG	4 cut(s)	211, 266, 1111, 1253
BstSCI	CCNGG	5 cut(s)	209, 264, 1109, 1225, 1251
BstSFI	CTRYAG	1 cut(s)	1025
BstUI	CGCG	5 cut(s)	45, 141, 222, 422, 1094
BstV2I	GAAGAC	1 cut(s)	1179
BstX2I	RGATCY	1 cut(s)	703
BstYI	RGATCY	1 cut(s)	703
BstZI	CGGCCG	1 cut(s)	166
BsuI	GTATCC	1 cut(s)	272
BsuRI	GGCC	6 cut(s)	119, 147, 168, 207, 299, 1044
BtgI	CCRYGG	3 cut(s)	114, 359, 420
Cac8I	GCNNGC	4 cut(s)	121, 139, 876, 906
CfoI	GCGC	5 cut(s)	47, 409, 427, 1096, 1156
Cfr10I	RCCGGY	3 cut(s)	164, 270, 920
Cfr13I	GGNCC	6 cut(s)	145, 206, 214, 268, 1073, 1135
Cfr42I	CCGCGG	1 cut(s)	423
CseI	GACGC	2 cut(s)	211, 1030
CspAI	ACCGGT	1 cut(s)	270
CviAII	CATG	2 cut(s)	1106, 1201
DdeI	CTNAG	2 cut(s)	707, 1001
DinI	GGCGCC	1 cut(s)	1155
DpnI	GATC	2 cut(s)	128, 705
DpnII	GATC	2 cut(s)	126, 703
DrdI	GACNNNNNNGTC	1 cut(s)	221
DriI	GACNNNNNGTC	1 cut(s)	1288
DseDI	GACNNNNNNGTC	1 cut(s)	221
EaeI	YGGCCR	3 cut(s)	117, 166, 1042
EagI	CGGCCG	1 cut(s)	166
Eam1104I	CTCTTC	1 cut(s)	723
Eam1105I	GACNNNNNGTC	1 cut(s)	1288
EarI	CTCTTC	1 cut(s)	723
EciI	GGCGGA	5 cut(s)	215, 542, 654, 823, 893
Ecl136II	GAGCTC	2 cut(s)	343, 883
EclXI	CGGCCG	1 cut(s)	166
Eco24I	GRGCYC	2 cut(s)	345, 885
Eco31I	GGTCTC	1 cut(s)	89
Eco47I	GGWCC	4 cut(s)	214, 268, 1073, 1135
Eco52I	CGGCCG	1 cut(s)	166
Eco53kI	GAGCTC	2 cut(s)	343, 883
Eco57I	CTGAAG	2 cut(s)	375, 1064
Eco72I	CACGTG	1 cut(s)	843
Eco88I	CYCGRG	4 cut(s)	86, 445, 655, 818
EcoICRI	GAGCTC	2 cut(s)	343, 883
EcoO109I	RGGNCCY	2 cut(s)	206, 1073
EcoRII	CCWGG	4 cut(s)	209, 264, 1109, 1251
EcoT22I	ATGCAT	1 cut(s)	1167
EcoT38I	GRGCYC	2 cut(s)	345, 885
EgeI	GGCGCC	1 cut(s)	1155
EheI	GGCGCC	1 cut(s)	1155
FaeI	CATG	2 cut(s)	1109, 1204
FaiI	YATR	4 cut(s)	155, 1107, 1167, 1202
FalI	AAGNNNNNCTT	2 cut(s)	593, 625
FaqI	GGGAC	2 cut(s)	227, 1086
FatI	CATG	2 cut(s)	1105, 1200
FauI	CCCGC	1 cut(s)	134
FriOI	GRGCYC	2 cut(s)	345, 885
GlaI	GCGC	5 cut(s)	46, 408, 426, 1095, 1155
GsaI	CCCAGC	1 cut(s)	294
HaeII	RGCGCY	1 cut(s)	1157
HaeIII	GGCC	6 cut(s)	119, 147, 168, 207, 299, 1044
HapII	CCGG	9 cut(s)	165, 169, 271, 668, 921, 1197, 1215, 1227, 1241
HgaI	GACGC	2 cut(s)	211, 1030
HhaI	GCGC	5 cut(s)	47, 409, 427, 1096, 1156
Hin1I	GRCGYC	2 cut(s)	261, 1154
Hin1II	CATG	2 cut(s)	1109, 1204
Hin6I	GCGC	5 cut(s)	45, 407, 425, 1094, 1154
HinP1I	GCGC	5 cut(s)	45, 407, 425, 1094, 1154
HinfI	GANTC	6 cut(s)	538, 575, 581, 1003, 1206, 1248
HpaII	CCGG	9 cut(s)	165, 169, 271, 668, 921, 1197, 1215, 1227, 1241
HphI	GGTGA	3 cut(s)	20, 740, 773
Hpy166II	GTNNAC	2 cut(s)	846, 981
Hpy188I	TCNGA	8 cut(s)	402, 477, 498, 580, 774, 1135, 1149, 1282
Hpy188III	TCNNGA	7 cut(s)	88, 316, 385, 460, 681, 731, 895
Hpy8I	GTNNAC	2 cut(s)	846, 981
Hpy99I	CGWCG	9 cut(s)	263, 305, 341, 350, 571, 634, 649, 1024, 1274
HpyAV	CCTTC	3 cut(s)	35, 1088, 1107
HpyCH4III	ACNGT	3 cut(s)	567, 1014, 1185
HpyCH4IV	ACGT	3 cut(s)	261, 842, 983
HpyCH4V	TGCA	3 cut(s)	195, 1027, 1165
HpyF3I	CTNAG	2 cut(s)	707, 1001
HpySE526I	ACGT	3 cut(s)	261, 842, 983
Hsp92I	GRCGYC	2 cut(s)	261, 1154
Hsp92II	CATG	2 cut(s)	1109, 1204
HspAI	GCGC	5 cut(s)	45, 407, 425, 1094, 1154
KasI	GGCGCC	1 cut(s)	1153
KflI	GGGWCCC	1 cut(s)	1073
KspI	CCGCGG	1 cut(s)	423
Kzo9I	GATC	2 cut(s)	126, 703
LmnI	GCTCC	6 cut(s)	7, 478, 529, 836, 880, 1264
LweI	GCATC	2 cut(s)	778, 1284
MaeII	ACGT	3 cut(s)	261, 842, 983
MaeIII	GTNAC	3 cut(s)	935, 1008, 1088
MalI	GATC	2 cut(s)	128, 705
MboI	GATC	2 cut(s)	126, 703
MboII	GAAGA	6 cut(s)	99, 601, 710, 734, 737, 1179
MflI	RGATCY	1 cut(s)	703
MhlI	GDGCHC	3 cut(s)	345, 885, 1269
MluCI	AATT	5 cut(s)	251, 375, 553, 738, 1306
Mly113I	GGCGCC	1 cut(s)	1154
MlyI	GAGTC	3 cut(s)	569, 575, 1012
MmeI	TCCRAC	3 cut(s)	425, 603, 1305
Mph1103I	ATGCAT	1 cut(s)	1167
MseI	TTAA	2 cut(s)	600, 1318
MslI	CAYNNNNRTG	1 cut(s)	786
MspA1I	CMGCKG	4 cut(s)	68, 422, 960, 1000
MspI	CCGG	9 cut(s)	165, 169, 271, 668, 921, 1197, 1215, 1227, 1241
MspR9I	CCNGG	5 cut(s)	211, 266, 1111, 1227, 1253
Mva1269I	GAATGC	1 cut(s)	906
MvaI	CCWGG	4 cut(s)	211, 266, 1111, 1253
MvnI	CGCG	5 cut(s)	45, 141, 222, 422, 1094
NarI	GGCGCC	1 cut(s)	1154
NciI	CCSGG	1 cut(s)	1227
NdeII	GATC	2 cut(s)	126, 703
NlaIII	CATG	2 cut(s)	1109, 1204
NlaIV	GGNNCC	9 cut(s)	146, 208, 215, 365, 474, 893, 1074, 1075, 1155
NmuCI	GTSAC	1 cut(s)	1008
NsiI	ATGCAT	1 cut(s)	1167
PaeR7I	CTCGAG	1 cut(s)	445
PasI	CCCWGGG	1 cut(s)	210
PcsI	WCGNNNNNNNCGW	6 cut(s)	342, 345, 653, 1028, 1215, 1278
PctI	GAATGC	1 cut(s)	906
PfeI	GAWTC	3 cut(s)	538, 1206, 1248
PflFI	GACNNNGTC	1 cut(s)	81
PfoI	TCCNGGA	1 cut(s)	264
PinAI	ACCGGT	1 cut(s)	270
PleI	GAGTC	3 cut(s)	569, 575, 1011
PluTI	GGCGCC	1 cut(s)	1157
PmaCI	CACGTG	1 cut(s)	843
PmlI	CACGTG	1 cut(s)	843
PpsI	GAGTC	3 cut(s)	569, 575, 1011
Ppu21I	YACGTR	1 cut(s)	843
PpuMI	RGGWCCY	1 cut(s)	1073
PsiI	TTATAA	1 cut(s)	155
Psp124BI	GAGCTC	2 cut(s)	345, 885
Psp5II	RGGWCCY	1 cut(s)	1073
Psp6I	CCWGG	4 cut(s)	209, 264, 1109, 1251
PspCI	CACGTG	1 cut(s)	843
PspFI	CCCAGC	1 cut(s)	290
PspGI	CCWGG	4 cut(s)	209, 264, 1109, 1251
PspN4I	GGNNCC	9 cut(s)	146, 208, 215, 365, 474, 893, 1074, 1075, 1155
PspPI	GGNCC	6 cut(s)	145, 206, 214, 268, 1073, 1135
PspPPI	RGGWCCY	1 cut(s)	1073
PspXI	VCTCGAGB	1 cut(s)	445
PstI	CTGCAG	1 cut(s)	1029
PsuI	RGATCY	1 cut(s)	703
PsyI	GACNNNGTC	1 cut(s)	81
RseI	CAYNNNNRTG	1 cut(s)	786
SacI	GAGCTC	2 cut(s)	345, 885
SacII	CCGCGG	1 cut(s)	423
SaqAI	TTAA	2 cut(s)	600, 1318
Sau3AI	GATC	2 cut(s)	126, 703
Sau96I	GGNCC	6 cut(s)	145, 206, 214, 268, 1073, 1135
SchI	GAGTC	3 cut(s)	569, 575, 1012
ScrFI	CCNGG	5 cut(s)	211, 266, 1111, 1227, 1253
SduI	GDGCHC	3 cut(s)	345, 885, 1269
SfaNI	GCATC	2 cut(s)	778, 1284
SfcI	CTRYAG	1 cut(s)	1025
SfoI	GGCGCC	1 cut(s)	1155
Sfr274I	CTCGAG	1 cut(s)	445
Sfr303I	CCGCGG	1 cut(s)	423
SgrBI	CCGCGG	1 cut(s)	423
SinI	GGWCC	4 cut(s)	214, 268, 1073, 1135
SlaI	CTCGAG	1 cut(s)	445
SmiMI	CAYNNNNRTG	1 cut(s)	786
SmlI	CTYRAG	1 cut(s)	445
SmoI	CTYRAG	1 cut(s)	445
Sse9I	AATT	5 cut(s)	251, 375, 553, 738, 1306
SspDI	GGCGCC	1 cut(s)	1153
SstI	GAGCTC	2 cut(s)	345, 885
StyD4I	CCNGG	5 cut(s)	209, 264, 1109, 1225, 1251
TaaI	ACNGT	3 cut(s)	567, 1014, 1185
TaiI	ACGT	3 cut(s)	264, 845, 986
TasI	AATT	5 cut(s)	251, 375, 553, 738, 1306
TfiI	GAWTC	3 cut(s)	538, 1206, 1248
Tru1I	TTAA	2 cut(s)	600, 1318
Tru9I	TTAA	2 cut(s)	600, 1318
TseFI	GTSAC	1 cut(s)	1008
Tsp45I	GTSAC	1 cut(s)	1008
TspDTI	ATGAA	3 cut(s)	710, 1050, 1094
TspGWI	ACGGA	1 cut(s)	370
Tth111I	GACNNNGTC	1 cut(s)	81
VpaK11BI	GGWCC	4 cut(s)	214, 268, 1073, 1135
XapI	RAATTY	1 cut(s)	553
XcmI	CCANNNNNNNNNTGG	2 cut(s)	127, 1198
XhoI	CTCGAG	1 cut(s)	445
ZraI	GACGTC	1 cut(s)	262
Zsp2I	ATGCAT	1 cut(s)	1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.