Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000293

Physical Location & Seq

Genomic Coordinates Reverse (-)

37239267 .. 37241971

Gene Structure 2705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1258900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1305 bp

ATGGGGGATTCTCACCACCTCCACCACCACCAAGCAACGACGTCATCTCGCCTGGGGATAAGGCCTCCGTCCTCGGGCGCAGGAGTGGTCAGCACAGACATCGTGGAGGTGGTACGAGGCAGCCACATTGTCCGGGCGACGGGCCGGAAAGACAGGCACAGCAAGGTCTGCACGGCGAAAGGCCCGAGGGACCGCCGCGTCCGGCTCGCCGCTCACACCGCCATTCAATTCTACGACGTCCAGGACCGGCTCGGCTACGACCGACCCAGCAAGGCCGTCGATTGGCTAATCAAGAAGGCCAAGGCCGCCATAGACGAGCTAGACGAGCTTCCCTCATGGAACCCACATTCGACTTCAACCACCGCGTCGGTTCCGGGCATGGAGACCCACAATCCGACCACGACCGGCATCCACTGCTTCGCGGGAGTGGACGCAATTGGGTCTGCTAATCAAAGGACAACAATGGTGGGGAGTGGAGTTTCGGAACAGCAAATTGTTCAGAACCCAAATAGCAACTCGACTTTCCTCCCACCGTCGCTCGACTCGGACGCCATTGCAGACACCATAAAGTCCTTTTTCCCAACGGGTGCTTCCGCAATCGCAGCCGCAGCCGAGGCTCCGTCGTCGACGATACAGTTTCATCAGAACTACCCACCTGATTTACTCTCCAGAACCAGCAGCCAGAGCCAAGATCTGCGCCTCTCTCTGCAATCCTTCCAAGACCCAATTCTCCTCCACCAGCACCACGCTCAGACCCATCAAAACGAGCAATCCCTTTTCTCCGGATCCCAAAACCCGCTTGGGTTTGATGGGTCCTCCGCCGCGTGGGCAGAGCATCACCACAACCAGCAGCAGCAAGAGATGAACAGATTCCAGAGAATGGTGGCTTGGAACAGCGGAGGCGGAGATAGCGGTGATAACGGCGGTGGATCATCGTCGTCAGGCGGGTTTACATTCAACTCGCTGCTACCAACACAGCAGAGTGGTACTAGTTCTTTGCAGCAGCAGCAGCCGTCGTTGTTCGGCCAAAGCCAGTTCTTTTTTCAGAGGGGACCCCTTCAGTCCAGTAACTCGCCGTCAATCCGTGCTTGGATGATGGACCAGCAAAACCAACAATCCATTTCTCACGATCATCATCATCAAATCTCGCAATCCATTCATCACCAACCGTCCTTTTCCGGTATGGGATTCACCTCCGGAGGTGGATTCTCCGGCTTCCACATCCCGGCACGAATTCACGGCGAGGAGGAGCACGACGGCATCTCTGACAAGCCGTCCTCTGCTTCCTCCAATTCTCGCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040034 GO:0042221 GO:0045962 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

435

Amino Acids

46.95

Weight (kDa)

6.55

Isoelectric Point (pI)

54.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCP	PF03634	48 - 118	2.7e-29	TCP family transcription factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53230 AT1G53230 AT3G15030 AT3G15030 AT3G15030 AT3G15030
fragaria_vesca	FvH4_3g08160 FvH4_3g18740
malus_domestica	MD03G1239100.v1.1 MD05G1305100.v1.1 MD11G1258900.v1.1
prunus_persica	Prupe.4G057100_v2.0.a1 Prupe.4G171100_v2.0.a1
pyrus_communis	pycom03g18430 pycom11g22850
rosa_chinensis	RchiOBHm_Chr4g0418991 RchiOBHm_Chr4g0420791 RchiOBHm_Chr5g0010031 RchiOBHm_Chr5g0031541
rosa_laevigata	RLG00000013430 RLG00000015337 RLG00000031720 RLG00000033322 RLG00000035733
rosa_multiflora	Rmu_co8053810.1_g000001 Rmu_co8138760.1_g000001 Rmu_co8175406.1_g000001 Rmu_co8265597.1_g000001 Rmu_sc0000090.1_g000007 Rmu_sc0000115.1_g000024 Rmu_sc0000288.1_g000014 Rmu_sc0000324.1_g000023 Rmu_sc0000423.1_g000011 Rmu_sc0000438.1_g000001 Rmu_sc0000516.1_g000051 Rmu_sc0000524.1_g000034 Rmu_sc0000530.1_g000034 Rmu_sc0000550.1_g000022 Rmu_sc0000631.1_g000026 Rmu_sc0000861.1_g000047 Rmu_sc0000861.1_g000062 Rmu_sc0001036.1_g000040 Rmu_sc0001258.1_g000009 Rmu_sc0001353.1_g000029 Rmu_sc0001374.1_g000048 Rmu_sc0001426.1_g000012 Rmu_sc0001526.1_g000046 Rmu_sc0001684.1_g000011 Rmu_sc0001689.1_g000026 Rmu_sc0001706.1_g000025 Rmu_sc0002017.1_g000004 Rmu_sc0002060.1_g000008 Rmu_sc0002260.1_g000006 Rmu_sc0002275.1_g000007 Rmu_sc0002340.1_g000004 Rmu_sc0003556.1_g000029 Rmu_sc0003610.1_g000044 Rmu_sc0003690.1_g000002 Rmu_sc0004189.1_g000026 Rmu_sc0004250.1_g000041 Rmu_sc0004435.1_g000005 Rmu_sc0004621.1_g000008 Rmu_sc0004947.1_g000031 Rmu_sc0004972.1_g000008 Rmu_sc0005791.1_g000017 Rmu_sc0005812.1_g000007 Rmu_sc0006170.1_g000002 Rmu_sc0006297.1_g000003 Rmu_sc0006435.1_g000006 Rmu_sc0006455.1_g000002 Rmu_sc0006792.1_g000018 Rmu_sc0007904.1_g000002 Rmu_sc0008081.1_g000008 Rmu_sc0008698.1_g000010 Rmu_sc0011940.1_g000008 Rmu_sc0012051.1_g000001 Rmu_sc0013001.1_g000012 Rmu_sc0017665.1_g000008 Rmu_sc0021290.1_g000002 Rmu_sc0023961.1_g000001 Rmu_sc0025647.1_g000001 Rmu_sc0030540.1_g000003 Rmu_sc0030935.1_g000001 Rmu_sc0030936.1_g000002 Rmu_sc0040629.1_g000001 Rmu_sc0040630.1_g000001 Rmu_ssc0000018.1_g000003 Rmu_ssc0000093.1_g000019 Rmu_ssc0000372.1_g000047 Rmu_ssc0000472.1_g000004
rosa_roxburghii	Rroxscaffold_1G00010400 Rroxscaffold_1G00048760 Rroxscaffold_1G00066140 Rroxscaffold_2G00087730 Rroxscaffold_2G00114360 Rroxscaffold_2G00129990 Rroxscaffold_5G00344710 Rroxscaffold_5G00356030 Rroxscaffold_5G00377440 Rroxscaffold_6G00391660 Rroxscaffold_7G00175440 Rroxscaffold_7G00190080 Rroxscaffold_7G00190400
rosa_rugosa	Rorug02G0056400 Rorug02G0133600 Rorug02G0314600 Rorug02G0407100 Rorug02G0623700 Rorug03G0182200.1 Rorug03G0369500.1 Rorug04G0335800 Rorug04G0422400.1 Rorug04G0448800 Rorug05G0127000 Rorug06G0289000 Rorug07G0333100
rosa_samantha	Rh5AG079500 Rh5CG086900 Rh5DG075000 Rh5DG240600 Rh6DG251700
rosa_wichuraiana	Rw5G007360 Rw5G020060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	197
AatII	GACGTC	2 cut(s)	44, 240
AccB7I	CCANNNNNTGG	1 cut(s)	880
AccBSI	CCGCTC	1 cut(s)	212
AccI	GTMKAC	1 cut(s)	626
AccII	CGCG	4 cut(s)	198, 365, 422, 824
AccIII	TCCGGA	2 cut(s)	782, 1196
AclWI	GGATC	3 cut(s)	780, 793, 937
AcoI	YGGCCR	1 cut(s)	1024
AcsI	RAATTY	1 cut(s)	1233
AcuI	CTGAAG	1 cut(s)	1043
AcyI	GRCGYC	3 cut(s)	41, 237, 549
AfaI	GTAC	2 cut(s)	114, 988
AfiI	CCNNNNNNNGG	6 cut(s)	74, 139, 282, 825, 880, 1225
AgsI	TTSAA	3 cut(s)	227, 357, 958
AhdI	GACNNNNNGTC	1 cut(s)	1273
AhlI	ACTAGT	1 cut(s)	989
AjnI	CCWGG	2 cut(s)	51, 240
AjuI	GAANNNNNNNTTGG	6 cut(s)	574, 606, 711, 743, 871, 903
AluBI	AGCT	2 cut(s)	319, 328
AluI	AGCT	2 cut(s)	319, 328
Alw21I	GWGCWC	1 cut(s)	1254
Alw26I	GTCTC	1 cut(s)	377
AlwI	GGATC	3 cut(s)	780, 793, 937
Ama87I	CYCGRG	2 cut(s)	73, 184
Aor13HI	TCCGGA	2 cut(s)	782, 1196
AoxI	GGCC	7 cut(s)	62, 142, 181, 273, 297, 303, 1024
ApoI	RAATTY	1 cut(s)	1233
Asp700I	GAANNNNTTC	1 cut(s)	869
AspLEI	GCGC	2 cut(s)	80, 699
AspS9I	GGNCC	7 cut(s)	142, 182, 190, 244, 813, 1052, 1099
AsuC2I	CCSGG	3 cut(s)	134, 375, 1226
AsuHPI	GGTGA	5 cut(s)	5, 830, 926, 1154, 1183
AvaI	CYCGRG	2 cut(s)	73, 184
AvaII	GGWCC	5 cut(s)	190, 244, 813, 1052, 1099
BamHI	GGATCC	1 cut(s)	785
Bbv12I	GWGCWC	1 cut(s)	1254
BccI	CCATC	3 cut(s)	765, 803, 1090
BceAI	ACGGC	8 cut(s)	189, 260, 937, 997, 1060, 1255, 1258, 1273
BcgI	CGANNNNNNTGC	4 cut(s)	82, 116, 259, 293
BciT130I	CCWGG	2 cut(s)	53, 242
BcnI	CCSGG	3 cut(s)	134, 375, 1226
BcoDI	GTCTC	1 cut(s)	377
BcuI	ACTAGT	1 cut(s)	989
BfaI	CTAG	2 cut(s)	320, 990
BglI	GCCNNNNNGGC	1 cut(s)	827
BglII	AGATCT	1 cut(s)	691
Bme1390I	CCNGG	5 cut(s)	53, 134, 242, 375, 1226
Bme18I	GGWCC	5 cut(s)	190, 244, 813, 1052, 1099
BmeRI	GACNNNNNGTC	1 cut(s)	1273
BmeT110I	CYCGRG	2 cut(s)	73, 184
BmgT120I	GGNCC	7 cut(s)	142, 182, 190, 244, 813, 1052, 1099
BmiI	GGNNCC	8 cut(s)	191, 341, 372, 618, 787, 814, 1053, 1054
BmrFI	CCNGG	5 cut(s)	53, 134, 242, 375, 1226
BmsI	GCATC	3 cut(s)	417, 844, 1269
BplI	GAGNNNNNCTC	2 cut(s)	317, 349
BpmI	CTGGAG	1 cut(s)	652
BpuMI	CCSGG	3 cut(s)	134, 375, 1226
BsaBI	GATNNNNATC	1 cut(s)	1134
BsaHI	GRCGYC	3 cut(s)	41, 237, 549
BsaI	GGTCTC	1 cut(s)	377
BsaJI	CCNNGG	5 cut(s)	52, 72, 185, 300, 612
BsaWI	WCCGGW	3 cut(s)	782, 1178, 1196
Bsc4I	CCNNNNNNNGG	6 cut(s)	74, 139, 282, 825, 880, 1225
Bse118I	RCCGGY	2 cut(s)	246, 404
Bse1I	ACTGG	2 cut(s)	1033, 1065
Bse3DI	GCAATG	1 cut(s)	552
Bse8I	GATNNNNATC	1 cut(s)	1134
BseAI	TCCGGA	2 cut(s)	782, 1196
BseBI	CCWGG	2 cut(s)	53, 242
BseDI	CCNNGG	5 cut(s)	52, 72, 185, 300, 612
BseGI	GGATG	3 cut(s)	408, 1098, 1221
BseJI	GATNNNNATC	1 cut(s)	1134
BseLI	CCNNNNNNNGG	6 cut(s)	74, 139, 282, 825, 880, 1225
BseMI	GCAATG	1 cut(s)	552
BseMII	CTCAG	1 cut(s)	764
BseNI	ACTGG	2 cut(s)	1033, 1065
BseRI	GAGGAG	3 cut(s)	722, 1259, 1262
BseYI	CCCAGC	1 cut(s)	266
BsgI	GTGCAG	1 cut(s)	154
Bsh1236I	CGCG	4 cut(s)	198, 365, 422, 824
Bsh1285I	CGRYCG	2 cut(s)	262, 405
BshFI	GGCC	7 cut(s)	64, 144, 183, 275, 299, 305, 1026
BsiEI	CGRYCG	2 cut(s)	262, 405
BsiHKAI	GWGCWC	1 cut(s)	1254
BsiHKCI	CYCGRG	2 cut(s)	73, 184
BslFI	GGGAC	2 cut(s)	203, 1065
BslI	CCNNNNNNNGG	6 cut(s)	74, 139, 282, 825, 880, 1225
BsmAI	GTCTC	1 cut(s)	377
BsmFI	GGGAC	2 cut(s)	203, 1065
BsnI	GGCC	7 cut(s)	64, 144, 183, 275, 299, 305, 1026
Bso31I	GGTCTC	1 cut(s)	377
BsoBI	CYCGRG	2 cut(s)	73, 184
Bsp1286I	GDGCHC	1 cut(s)	1254
Bsp13I	TCCGGA	2 cut(s)	782, 1196
Bsp143I	GATC	4 cut(s)	691, 785, 929, 1129
BspANI	GGCC	7 cut(s)	64, 144, 183, 275, 299, 305, 1026
BspCNI	CTCAG	1 cut(s)	763
BspEI	TCCGGA	2 cut(s)	782, 1196
BspFNI	CGCG	4 cut(s)	198, 365, 422, 824
BspLI	GGNNCC	8 cut(s)	191, 341, 372, 618, 787, 814, 1053, 1054
BspPI	GGATC	3 cut(s)	780, 793, 937
BspTNI	GGTCTC	1 cut(s)	377
BsrBI	CCGCTC	1 cut(s)	212
BsrDI	GCAATG	1 cut(s)	552
BsrFI	RCCGGY	2 cut(s)	246, 404
BsrI	ACTGG	2 cut(s)	1033, 1065
BssAI	RCCGGY	2 cut(s)	246, 404
BssECI	CCNNGG	5 cut(s)	52, 72, 185, 300, 612
BssMI	GATC	4 cut(s)	691, 785, 929, 1129
BssNI	GRCGYC	3 cut(s)	41, 237, 549
BssT1I	CCWWGG	1 cut(s)	300
Bst2UI	CCWGG	2 cut(s)	53, 242
Bst4CI	ACNGT	3 cut(s)	534, 636, 1170
BstACI	GRCGYC	3 cut(s)	41, 237, 549
BstAPI	GCANNNNNTGC	2 cut(s)	168, 414
BstC8I	GCNNGC	1 cut(s)	207
BstDEI	CTNAG	1 cut(s)	750
BstF5I	GGATG	3 cut(s)	408, 1098, 1221
BstFNI	CGCG	4 cut(s)	198, 365, 422, 824
BstHHI	GCGC	2 cut(s)	80, 699
BstKTI	GATC	4 cut(s)	694, 788, 932, 1132
BstMAI	GTCTC	1 cut(s)	377
BstMBI	GATC	4 cut(s)	691, 785, 929, 1129
BstMCI	CGRYCG	2 cut(s)	262, 405
BstNI	CCWGG	2 cut(s)	53, 242
BstSCI	CCNGG	5 cut(s)	51, 132, 240, 373, 1224
BstUI	CGCG	4 cut(s)	198, 365, 422, 824
BstX2I	RGATCY	2 cut(s)	691, 785
BstYI	RGATCY	2 cut(s)	691, 785
BsuRI	GGCC	7 cut(s)	64, 144, 183, 275, 299, 305, 1026
BtsCI	GGATG	3 cut(s)	408, 1098, 1221
BtsI	GCAGTG	1 cut(s)	412
BtsIMutI	CAGTG	1 cut(s)	412
Cac8I	GCNNGC	1 cut(s)	207
CfoI	GCGC	2 cut(s)	80, 699
Cfr10I	RCCGGY	2 cut(s)	246, 404
Cfr13I	GGNCC	7 cut(s)	142, 182, 190, 244, 813, 1052, 1099
CseI	GACGC	4 cut(s)	187, 354, 440, 557
Csp6I	GTAC	2 cut(s)	113, 987
CspCI	CAANNNNNGTGG	2 cut(s)	447, 482
CviAII	CATG	2 cut(s)	336, 379
CviQI	GTAC	2 cut(s)	113, 987
DdeI	CTNAG	1 cut(s)	750
DpnI	GATC	4 cut(s)	693, 787, 931, 1131
DpnII	GATC	4 cut(s)	691, 785, 929, 1129
DrdI	GACNNNNNNGTC	1 cut(s)	197
DriI	GACNNNNNGTC	1 cut(s)	1273
DseDI	GACNNNNNNGTC	1 cut(s)	197
EaeI	YGGCCR	1 cut(s)	1024
Eam1105I	GACNNNNNGTC	1 cut(s)	1273
EciI	GGCGGA	2 cut(s)	808, 918
Eco130I	CCWWGG	1 cut(s)	300
Eco147I	AGGCCT	1 cut(s)	64
Eco31I	GGTCTC	1 cut(s)	377
Eco47I	GGWCC	5 cut(s)	190, 244, 813, 1052, 1099
Eco57I	CTGAAG	1 cut(s)	1043
Eco88I	CYCGRG	2 cut(s)	73, 184
EcoO109I	RGGNCCY	2 cut(s)	813, 1052
EcoRI	GAATTC	1 cut(s)	1233
EcoRII	CCWGG	2 cut(s)	51, 240
EcoT14I	CCWWGG	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	300
FaeI	CATG	2 cut(s)	339, 382
FaiI	YATR	5 cut(s)	311, 337, 380, 566, 1184
FaqI	GGGAC	2 cut(s)	203, 1065
FatI	CATG	2 cut(s)	335, 378
FauI	CCCGC	3 cut(s)	415, 804, 938
FblI	GTMKAC	1 cut(s)	626
FokI	GGATG	3 cut(s)	395, 1105, 1208
FspBI	CTAG	2 cut(s)	320, 990
GlaI	GCGC	2 cut(s)	79, 698
GsaI	CCCAGC	1 cut(s)	270
GsuI	CTGGAG	1 cut(s)	652
HaeIII	GGCC	7 cut(s)	64, 144, 183, 275, 299, 305, 1026
HgaI	GACGC	4 cut(s)	187, 354, 440, 557
HhaI	GCGC	2 cut(s)	80, 699
Hin1I	GRCGYC	3 cut(s)	41, 237, 549
Hin1II	CATG	2 cut(s)	339, 382
Hin6I	GCGC	2 cut(s)	78, 697
HinP1I	GCGC	2 cut(s)	78, 697
HincII	GTYRAC	1 cut(s)	627
HindII	GTYRAC	1 cut(s)	627
HinfI	GANTC	5 cut(s)	8, 542, 870, 1188, 1206
HphI	GGTGA	5 cut(s)	5, 830, 926, 1154, 1183
Hpy166II	GTNNAC	3 cut(s)	430, 627, 951
Hpy188I	TCNGA	8 cut(s)	396, 484, 501, 547, 645, 753, 1047, 1267
Hpy188III	TCNNGA	6 cut(s)	292, 669, 783, 874, 1127, 1197
Hpy8I	GTNNAC	3 cut(s)	430, 627, 951
HpyAV	CCTTC	3 cut(s)	289, 724, 1067
HpyCH4III	ACNGT	3 cut(s)	534, 636, 1170
HpyCH4IV	ACGT	2 cut(s)	41, 237
HpyCH4V	TGCA	4 cut(s)	171, 557, 709, 1000
HpyF3I	CTNAG	1 cut(s)	750
HpySE526I	ACGT	2 cut(s)	41, 237
Hsp92I	GRCGYC	3 cut(s)	41, 237, 549
Hsp92II	CATG	2 cut(s)	339, 382
HspAI	GCGC	2 cut(s)	78, 697
KflI	GGGWCCC	1 cut(s)	1052
Kpn2I	TCCGGA	2 cut(s)	782, 1196
Kzo9I	GATC	4 cut(s)	691, 785, 929, 1129
LmnI	GCTCC	2 cut(s)	622, 1249
LweI	GCATC	3 cut(s)	417, 844, 1269
MaeI	CTAG	2 cut(s)	320, 990
MaeII	ACGT	2 cut(s)	41, 237
MaeIII	GTNAC	1 cut(s)	1067
MalI	GATC	4 cut(s)	693, 787, 931, 1131
MbiI	CCGCTC	1 cut(s)	212
MboI	GATC	4 cut(s)	691, 785, 929, 1129
MfeI	CAATTG	1 cut(s)	435
MflI	RGATCY	2 cut(s)	691, 785
MhlI	GDGCHC	1 cut(s)	1254
MluCI	AATT	6 cut(s)	227, 435, 492, 726, 1233, 1291
MlyI	GAGTC	1 cut(s)	536
MmeI	TCCRAC	1 cut(s)	419
MroI	TCCGGA	2 cut(s)	782, 1196
MroXI	GAANNNNTTC	1 cut(s)	869
MspA1I	CMGCKG	1 cut(s)	897
MspR9I	CCNGG	5 cut(s)	53, 134, 242, 375, 1226
MunI	CAATTG	1 cut(s)	435
MvaI	CCWGG	2 cut(s)	53, 242
MvnI	CGCG	4 cut(s)	198, 365, 422, 824
NciI	CCSGG	3 cut(s)	134, 375, 1226
NdeII	GATC	4 cut(s)	691, 785, 929, 1129
NlaIII	CATG	2 cut(s)	339, 382
NlaIV	GGNNCC	8 cut(s)	191, 341, 372, 618, 787, 814, 1053, 1054
NmeAIII	GCCGAG	2 cut(s)	231, 637
PceI	AGGCCT	1 cut(s)	64
PcsI	WCGNNNNNNNCGW	1 cut(s)	321
PdmI	GAANNNNTTC	1 cut(s)	869
PfeI	GAWTC	4 cut(s)	8, 870, 1188, 1206
PflMI	CCANNNNNTGG	1 cut(s)	880
PfoI	TCCNGGA	1 cut(s)	240
PleI	GAGTC	1 cut(s)	536
PpsI	GAGTC	1 cut(s)	536
PpuMI	RGGWCCY	2 cut(s)	813, 1052
Psp5II	RGGWCCY	2 cut(s)	813, 1052
Psp6I	CCWGG	2 cut(s)	51, 240
PspFI	CCCAGC	1 cut(s)	266
PspGI	CCWGG	2 cut(s)	51, 240
PspN4I	GGNNCC	8 cut(s)	191, 341, 372, 618, 787, 814, 1053, 1054
PspPI	GGNCC	7 cut(s)	142, 182, 190, 244, 813, 1052, 1099
PspPPI	RGGWCCY	2 cut(s)	813, 1052
PsuI	RGATCY	2 cut(s)	691, 785
RsaI	GTAC	2 cut(s)	114, 988
RsaNI	GTAC	2 cut(s)	113, 987
SalI	GTCGAC	1 cut(s)	625
Sau3AI	GATC	4 cut(s)	691, 785, 929, 1129
Sau96I	GGNCC	7 cut(s)	142, 182, 190, 244, 813, 1052, 1099
SchI	GAGTC	1 cut(s)	536
ScrFI	CCNGG	5 cut(s)	53, 134, 242, 375, 1226
SduI	GDGCHC	1 cut(s)	1254
SfaNI	GCATC	3 cut(s)	417, 844, 1269
SgrDI	CGTCGACG	1 cut(s)	625
SinI	GGWCC	5 cut(s)	190, 244, 813, 1052, 1099
SpeI	ACTAGT	1 cut(s)	989
Sse9I	AATT	6 cut(s)	227, 435, 492, 726, 1233, 1291
SseBI	AGGCCT	1 cut(s)	64
SspMI	CTAG	2 cut(s)	320, 990
StuI	AGGCCT	1 cut(s)	64
StyD4I	CCNGG	5 cut(s)	51, 132, 240, 373, 1224
StyI	CCWWGG	1 cut(s)	300
TaaI	ACNGT	3 cut(s)	534, 636, 1170
TaiI	ACGT	2 cut(s)	44, 240
TaqI	TCGA	5 cut(s)	279, 350, 518, 540, 626
TaqII	GACCGA	1 cut(s)	276
TasI	AATT	6 cut(s)	227, 435, 492, 726, 1233, 1291
TauI	GCSGC	5 cut(s)	198, 212, 308, 608, 824
TfiI	GAWTC	4 cut(s)	8, 870, 1188, 1206
TscAI	CASTG	1 cut(s)	419
TspDTI	ATGAA	3 cut(s)	629, 878, 1148
TspGWI	ACGGA	3 cut(s)	57, 609, 1073
TspRI	CASTG	1 cut(s)	419
Van91I	CCANNNNNTGG	1 cut(s)	880
VpaK11BI	GGWCC	5 cut(s)	190, 244, 813, 1052, 1099
XapI	RAATTY	1 cut(s)	1233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	797
XmiI	GTMKAC	1 cut(s)	626
XmnI	GAANNNNTTC	1 cut(s)	869
XspI	CTAG	2 cut(s)	320, 990
ZraI	GACGTC	2 cut(s)	42, 238

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.