Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000293

Physical Location & Seq

Genomic Coordinates Forward (+)

36532337 .. 36534434

Gene Structure 2098 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0333100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1251 bp

ATGCTCGGAATATCGAATATTTGCAAGGGATACAAATCCTTTTTATTGAAATGGAACGCCCAAAACAAGCATTCTCGTTCGATTTCAGAAAGTGATGACACGACCAAGGAGAAAGATGGGAATGATTTTATAATTAGTTATCCATCAACACCAATAGGTGGTTTGAATCATACGCACAGCATTGATGATAGCTTACTCATGCGTCGAACTCTTTCGAGGAATAAAAGTAGCAGAAGATGCAAGACCCCTACGCCAAGGTCCTTCTCAAGAAGTATGAGCCGGAGCACCACCCCGAATTCATTTTCGAGCATTTCAAGTCGTAGGAACCCCTCCGAGACCGATATCCTTGCCTCTATAACAAGAAATCTGAGTCGGGAGGCCGAAATTGCTGCCTCTATATCAAGGAATATAAGTAGGAATATGAGCAGCAATAAAAGCCGCAATTTGAGCAGGAATGCGAGCAGCAGACACCCGTCTGAATCGGAATTACCCTCTCCATCACCTGCATCTCCACCGCCCGCCTCTCCAACACCGGCCTCACCTTCACCTGCCGCCTCTCCATCTACCGCTCGATCGCCTCATACCAGTAAAACAACAGGCACATCTGAAACGGACCCTACCACACCTCTATCAAGGACTCCGAGCAGGAGGAGCACCACCCCCATTGTGTTCTCTCAGACAACTGCTAGAAGGAAACCTCCCCCGGTTGAGAAGAAGCTTGAATTCACACTCGAGGAGTTGTGTCATGGATGCGTGAAGAAGATCCAGGTTACTAGAGATGTCATAAACAATGCCGGGATTATTGTGAAAGAAGAGGAAATACTGAAAATAAACGTGCAGCCAGGTTGGAGGAAAGGAACCAAGATCACATTCGAAGGGAAAGGGGATGAGAAACCAGGGTACCTTCCAGCCGATATCATCTTCTTGATAGATGAAAAGAGGCATCCTTTGTTCAAAAGAGCAGGCCGGGACGATTTGGAAATCGCTGTTGAGATTCCACTGGCGGATGCATTGGGAGGCTGCTCGTTTCCAGCTCCTTTGTTAGGAGGTGAAACAATTAGTCTGTCATTCGACGAAATTATACCTCATGGTTATGAAAAGGTCATCGAAGGACAAGGAATGCCAAAGCTTAAAGAACCAACAAAGAGAGGTGACCTCCGCATTACTTGTCTCGTTAATTTTCCGAAAAAATTGAGCGACGAGCAACGAGCAGAAGCTGTTTCAATTTTACAAGATTGTTCTTATCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040034 GO:0042221 GO:0045962 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

416

Amino Acids

45.72

Weight (kDa)

9.52

Isoelectric Point (pI)

71.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ_C	PF01556	237 - 395	1.7e-34	DnaJ C terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53230 AT1G53230 AT3G15030 AT3G15030 AT3G15030 AT3G15030
fragaria_vesca	FvH4_3g08160 FvH4_3g18740
malus_domestica	MD03G1239100.v1.1 MD05G1305100.v1.1 MD11G1258900.v1.1
prunus_persica	Prupe.4G057100_v2.0.a1 Prupe.4G171100_v2.0.a1
pyrus_communis	pycom03g18430 pycom11g22850
rosa_chinensis	RchiOBHm_Chr4g0418991 RchiOBHm_Chr4g0420791 RchiOBHm_Chr5g0010031 RchiOBHm_Chr5g0031541
rosa_laevigata	RLG00000013430 RLG00000015337 RLG00000031720 RLG00000033322 RLG00000035733
rosa_multiflora	Rmu_co8053810.1_g000001 Rmu_co8138760.1_g000001 Rmu_co8175406.1_g000001 Rmu_co8265597.1_g000001 Rmu_sc0000090.1_g000007 Rmu_sc0000115.1_g000024 Rmu_sc0000288.1_g000014 Rmu_sc0000324.1_g000023 Rmu_sc0000423.1_g000011 Rmu_sc0000438.1_g000001 Rmu_sc0000516.1_g000051 Rmu_sc0000524.1_g000034 Rmu_sc0000530.1_g000034 Rmu_sc0000550.1_g000022 Rmu_sc0000631.1_g000026 Rmu_sc0000861.1_g000047 Rmu_sc0000861.1_g000062 Rmu_sc0001036.1_g000040 Rmu_sc0001258.1_g000009 Rmu_sc0001353.1_g000029 Rmu_sc0001374.1_g000048 Rmu_sc0001426.1_g000012 Rmu_sc0001526.1_g000046 Rmu_sc0001684.1_g000011 Rmu_sc0001689.1_g000026 Rmu_sc0001706.1_g000025 Rmu_sc0002017.1_g000004 Rmu_sc0002060.1_g000008 Rmu_sc0002260.1_g000006 Rmu_sc0002275.1_g000007 Rmu_sc0002340.1_g000004 Rmu_sc0003556.1_g000029 Rmu_sc0003610.1_g000044 Rmu_sc0003690.1_g000002 Rmu_sc0004189.1_g000026 Rmu_sc0004250.1_g000041 Rmu_sc0004435.1_g000005 Rmu_sc0004621.1_g000008 Rmu_sc0004947.1_g000031 Rmu_sc0004972.1_g000008 Rmu_sc0005791.1_g000017 Rmu_sc0005812.1_g000007 Rmu_sc0006170.1_g000002 Rmu_sc0006297.1_g000003 Rmu_sc0006435.1_g000006 Rmu_sc0006455.1_g000002 Rmu_sc0006792.1_g000018 Rmu_sc0007904.1_g000002 Rmu_sc0008081.1_g000008 Rmu_sc0008698.1_g000010 Rmu_sc0011940.1_g000008 Rmu_sc0012051.1_g000001 Rmu_sc0013001.1_g000012 Rmu_sc0017665.1_g000008 Rmu_sc0021290.1_g000002 Rmu_sc0023961.1_g000001 Rmu_sc0025647.1_g000001 Rmu_sc0030540.1_g000003 Rmu_sc0030935.1_g000001 Rmu_sc0030936.1_g000002 Rmu_sc0040629.1_g000001 Rmu_sc0040630.1_g000001 Rmu_ssc0000018.1_g000003 Rmu_ssc0000093.1_g000019 Rmu_ssc0000372.1_g000047 Rmu_ssc0000472.1_g000004
rosa_roxburghii	Rroxscaffold_1G00010400 Rroxscaffold_1G00048760 Rroxscaffold_1G00066140 Rroxscaffold_2G00087730 Rroxscaffold_2G00114360 Rroxscaffold_2G00129990 Rroxscaffold_5G00344710 Rroxscaffold_5G00356030 Rroxscaffold_5G00377440 Rroxscaffold_6G00391660 Rroxscaffold_7G00175440 Rroxscaffold_7G00190080 Rroxscaffold_7G00190400
rosa_rugosa	Rorug02G0056400 Rorug02G0133600 Rorug02G0314600 Rorug02G0407100 Rorug02G0623700 Rorug03G0182200.1 Rorug03G0369500.1 Rorug04G0335800 Rorug04G0422400.1 Rorug04G0448800 Rorug05G0127000 Rorug06G0289000 Rorug07G0333100
rosa_samantha	Rh5AG079500 Rh5CG086900 Rh5DG075000 Rh5DG240600 Rh6DG251700
rosa_wichuraiana	Rw5G007360 Rw5G020060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	131
AarI	CACCTGC	2 cut(s)	511, 556
Acc36I	ACCTGC	2 cut(s)	511, 556
Acc65I	GGTACC	1 cut(s)	900
AccB1I	GGYRCC	1 cut(s)	900
AccB7I	CCANNNNNTGG	1 cut(s)	158
AccBSI	CCGCTC	1 cut(s)	569
AciI	CCGC	7 cut(s)	439, 515, 519, 552, 567, 1004, 1159
AclWI	GGATC	1 cut(s)	757
AcsI	RAATTY	2 cut(s)	295, 722
AfaI	GTAC	1 cut(s)	902
AfiI	CCNNNNNNNGG	2 cut(s)	158, 1043
AgsI	TTSAA	6 cut(s)	49, 166, 315, 722, 955, 1224
AjnI	CCWGG	3 cut(s)	765, 841, 895
AjuI	GAANNNNNNNTTGG	2 cut(s)	854, 886
AluBI	AGCT	5 cut(s)	192, 718, 1034, 1129, 1217
AluI	AGCT	5 cut(s)	192, 718, 1034, 1129, 1217
Alw21I	GWGCWC	2 cut(s)	287, 656
Alw26I	GTCTC	2 cut(s)	329, 1175
AlwI	GGATC	1 cut(s)	757
AlwNI	CAGNNNCTG	1 cut(s)	1217
Ama87I	CYCGRG	1 cut(s)	731
AoxI	GGCC	3 cut(s)	378, 534, 964
ApeKI	GCWGC	5 cut(s)	389, 426, 462, 838, 1020
ApoI	RAATTY	2 cut(s)	295, 722
Asp700I	GAANNNNTTC	1 cut(s)	211
Asp718I	GGTACC	1 cut(s)	900
AspS9I	GGNCC	2 cut(s)	258, 613
AsuC2I	CCSGG	3 cut(s)	704, 796, 968
AsuHPI	GGTGA	5 cut(s)	492, 531, 537, 1061, 1163
AsuII	TTCGAA	1 cut(s)	873
AvaI	CYCGRG	1 cut(s)	731
AvaII	GGWCC	2 cut(s)	258, 613
BaeI	ACNNNNGTAYC	2 cut(s)	884, 917
BanI	GGYRCC	1 cut(s)	900
BarI	GAAGNNNNNNTAC	2 cut(s)	804, 836
Bbv12I	GWGCWC	2 cut(s)	287, 656
BbvI	GCAGC	5 cut(s)	376, 438, 474, 850, 1007
BccI	CCATC	4 cut(s)	110, 151, 505, 568
BcgI	CGANNNNNNTGC	4 cut(s)	329, 363, 371, 405
BciT130I	CCWGG	3 cut(s)	767, 843, 897
BciVI	GTATCC	1 cut(s)	23
BcnI	CCSGG	3 cut(s)	704, 796, 968
BcoDI	GTCTC	2 cut(s)	329, 1175
BfaI	CTAG	2 cut(s)	687, 774
BfuAI	ACCTGC	2 cut(s)	511, 556
BfuI	GTATCC	1 cut(s)	23
BisI	GCNGC	7 cut(s)	390, 427, 439, 463, 552, 839, 1021
BlsI	GCNGC	7 cut(s)	391, 428, 440, 464, 553, 840, 1022
Bme1390I	CCNGG	6 cut(s)	704, 767, 796, 843, 897, 968
Bme18I	GGWCC	2 cut(s)	258, 613
BmeT110I	CYCGRG	1 cut(s)	731
BmgT120I	GGNCC	2 cut(s)	258, 613
BmiI	GGNNCC	4 cut(s)	326, 615, 859, 902
BmrFI	CCNGG	6 cut(s)	704, 767, 796, 843, 897, 968
BmsI	GCATC	5 cut(s)	227, 515, 740, 952, 997
BoxI	GACNNNNGTC	1 cut(s)	472
BplI	GAGNNNNNCTC	2 cut(s)	1140, 1172
Bpu14I	TTCGAA	1 cut(s)	873
BpuEI	CTTGAG	1 cut(s)	250
BpuMI	CCSGG	3 cut(s)	704, 796, 968
BsaBI	GATNNNNATC	1 cut(s)	34
BsaI	GGTCTC	1 cut(s)	329
BsaJI	CCNNGG	4 cut(s)	105, 254, 702, 896
Bsc4I	CCNNNNNNNGG	2 cut(s)	158, 1043
Bse118I	RCCGGY	1 cut(s)	532
Bse1I	ACTGG	2 cut(s)	585, 1005
Bse8I	GATNNNNATC	1 cut(s)	34
BseBI	CCWGG	3 cut(s)	767, 843, 897
BseDI	CCNNGG	4 cut(s)	105, 254, 702, 896
BseGI	GGATG	4 cut(s)	755, 892, 943, 1012
BseJI	GATNNNNATC	1 cut(s)	34
BseLI	CCNNNNNNNGG	2 cut(s)	158, 1043
BseMII	CTCAG	2 cut(s)	359, 689
BseNI	ACTGG	2 cut(s)	585, 1005
BseRI	GAGGAG	2 cut(s)	664, 749
BseXI	GCAGC	5 cut(s)	376, 438, 474, 850, 1007
BsgI	GTGCAG	1 cut(s)	857
Bsh1285I	CGRYCG	1 cut(s)	575
BshFI	GGCC	3 cut(s)	380, 536, 966
BshNI	GGYRCC	1 cut(s)	900
BsiEI	CGRYCG	1 cut(s)	575
BsiHKAI	GWGCWC	2 cut(s)	287, 656
BsiHKCI	CYCGRG	1 cut(s)	731
BsiSI	CCGG	5 cut(s)	280, 533, 704, 795, 967
BslFI	GGGAC	1 cut(s)	983
BslI	CCNNNNNNNGG	2 cut(s)	158, 1043
BsmAI	GTCTC	2 cut(s)	329, 1175
BsmFI	GGGAC	1 cut(s)	983
BsmI	GAATGC	3 cut(s)	70, 460, 1125
BsnI	GGCC	3 cut(s)	380, 536, 966
Bso31I	GGTCTC	1 cut(s)	329
BsoBI	CYCGRG	1 cut(s)	731
Bsp119I	TTCGAA	1 cut(s)	873
Bsp1286I	GDGCHC	2 cut(s)	287, 656
Bsp143I	GATC	3 cut(s)	572, 762, 864
BspACI	CCGC	7 cut(s)	439, 515, 519, 552, 567, 1004, 1159
BspANI	GGCC	3 cut(s)	380, 536, 966
BspCNI	CTCAG	2 cut(s)	360, 688
BspLI	GGNNCC	4 cut(s)	326, 615, 859, 902
BspMI	ACCTGC	2 cut(s)	511, 556
BspPI	GGATC	1 cut(s)	757
BspT104I	TTCGAA	1 cut(s)	873
BspT107I	GGYRCC	1 cut(s)	900
BspTNI	GGTCTC	1 cut(s)	329
BsrBI	CCGCTC	1 cut(s)	569
BsrFI	RCCGGY	1 cut(s)	532
BsrI	ACTGG	2 cut(s)	585, 1005
BssAI	RCCGGY	1 cut(s)	532
BssECI	CCNNGG	4 cut(s)	105, 254, 702, 896
BssMI	GATC	3 cut(s)	572, 762, 864
BssT1I	CCWWGG	2 cut(s)	105, 254
Bst2UI	CCWGG	3 cut(s)	767, 843, 897
Bst6I	CTCTTC	1 cut(s)	807
BstAPI	GCANNNNNTGC	1 cut(s)	237
BstBI	TTCGAA	1 cut(s)	873
BstC8I	GCNNGC	3 cut(s)	460, 519, 964
BstDEI	CTNAG	2 cut(s)	368, 675
BstEII	GGTNACC	1 cut(s)	1151
BstENI	CCTNNNNNAGG	1 cut(s)	1041
BstF5I	GGATG	4 cut(s)	755, 892, 943, 1012
BstKTI	GATC	3 cut(s)	575, 765, 867
BstMAI	GTCTC	2 cut(s)	329, 1175
BstMBI	GATC	3 cut(s)	572, 762, 864
BstMCI	CGRYCG	1 cut(s)	575
BstMWI	GCNNNNNNNGC	5 cut(s)	237, 386, 435, 447, 651
BstNI	CCWGG	3 cut(s)	767, 843, 897
BstPAI	GACNNNNGTC	1 cut(s)	472
BstPI	GGTNACC	1 cut(s)	1151
BstSCI	CCNGG	6 cut(s)	702, 765, 794, 841, 895, 966
BstV1I	GCAGC	5 cut(s)	376, 438, 474, 850, 1007
BstX2I	RGATCY	1 cut(s)	762
BstYI	RGATCY	1 cut(s)	762
BsuI	GTATCC	1 cut(s)	23
BsuRI	GGCC	3 cut(s)	380, 536, 966
BtsCI	GGATG	4 cut(s)	755, 892, 943, 1012
BtsIMutI	CAGTG	1 cut(s)	998
BveI	ACCTGC	2 cut(s)	511, 556
Cac8I	GCNNGC	3 cut(s)	460, 519, 964
CaiI	CAGNNNCTG	1 cut(s)	1217
Cfr10I	RCCGGY	1 cut(s)	532
Cfr13I	GGNCC	2 cut(s)	258, 613
CseI	GACGC	1 cut(s)	191
Csp6I	GTAC	1 cut(s)	901
CspCI	CAANNNNNGTGG	2 cut(s)	646, 681
CviAII	CATG	3 cut(s)	199, 746, 1088
CviQI	GTAC	1 cut(s)	901
DdeI	CTNAG	2 cut(s)	368, 675
DpnI	GATC	3 cut(s)	574, 764, 866
DpnII	GATC	3 cut(s)	572, 762, 864
Eam1104I	CTCTTC	1 cut(s)	807
EarI	CTCTTC	1 cut(s)	807
EciI	GGCGGA	1 cut(s)	1019
Eco130I	CCWWGG	2 cut(s)	105, 254
Eco31I	GGTCTC	1 cut(s)	329
Eco32I	GATATC	2 cut(s)	343, 916
Eco47I	GGWCC	2 cut(s)	258, 613
Eco88I	CYCGRG	1 cut(s)	731
Eco91I	GGTNACC	1 cut(s)	1151
EcoNI	CCTNNNNNAGG	1 cut(s)	1041
EcoO109I	RGGNCCY	1 cut(s)	258
EcoO65I	GGTNACC	1 cut(s)	1151
EcoRI	GAATTC	2 cut(s)	295, 722
EcoRII	CCWGG	3 cut(s)	765, 841, 895
EcoRV	GATATC	2 cut(s)	343, 916
EcoT14I	CCWWGG	2 cut(s)	105, 254
EcoT22I	ATGCAT	1 cut(s)	1012
ErhI	CCWWGG	2 cut(s)	105, 254
FaeI	CATG	3 cut(s)	202, 749, 1091
FaqI	GGGAC	1 cut(s)	983
FatI	CATG	3 cut(s)	198, 745, 1087
FauI	CCCGC	1 cut(s)	526
Fnu4HI	GCNGC	7 cut(s)	390, 427, 439, 463, 552, 839, 1021
FokI	GGATG	4 cut(s)	762, 899, 930, 1019
Fsp4HI	GCNGC	7 cut(s)	390, 427, 439, 463, 552, 839, 1021
FspBI	CTAG	2 cut(s)	687, 774
GluI	GCNGC	7 cut(s)	390, 427, 439, 463, 552, 839, 1021
HaeIII	GGCC	3 cut(s)	380, 536, 966
HapII	CCGG	5 cut(s)	280, 533, 704, 795, 967
HgaI	GACGC	1 cut(s)	191
Hin1II	CATG	3 cut(s)	202, 749, 1091
HindIII	AAGCTT	2 cut(s)	716, 1127
HinfI	GANTC	5 cut(s)	166, 370, 479, 637, 994
HpaII	CCGG	5 cut(s)	280, 533, 704, 795, 967
HphI	GGTGA	5 cut(s)	492, 531, 537, 1061, 1163
Hpy188III	TCNNGA	3 cut(s)	267, 374, 925
Hpy99I	CGWCG	3 cut(s)	207, 1076, 1202
HpyAV	CCTTC	6 cut(s)	271, 552, 684, 869, 914, 1103
HpyCH4IV	ACGT	1 cut(s)	834
HpyCH4V	TGCA	5 cut(s)	24, 240, 506, 838, 1010
HpyF10VI	GCNNNNNNNGC	5 cut(s)	237, 386, 435, 447, 651
HpyF3I	CTNAG	2 cut(s)	368, 675
HpySE526I	ACGT	1 cut(s)	834
Hsp92II	CATG	3 cut(s)	202, 749, 1091
KpnI	GGTACC	1 cut(s)	904
Kzo9I	GATC	3 cut(s)	572, 762, 864
LmnI	GCTCC	3 cut(s)	282, 651, 1039
Lsp1109I	GCAGC	5 cut(s)	376, 438, 474, 850, 1007
LweI	GCATC	5 cut(s)	227, 515, 740, 952, 997
MaeI	CTAG	2 cut(s)	687, 774
MaeII	ACGT	1 cut(s)	834
MaeIII	GTNAC	2 cut(s)	769, 1151
MalI	GATC	3 cut(s)	574, 764, 866
MbiI	CCGCTC	1 cut(s)	569
MboI	GATC	3 cut(s)	572, 762, 864
MboII	GAAGA	6 cut(s)	246, 724, 769, 772, 824, 913
MflI	RGATCY	1 cut(s)	762
MhlI	GDGCHC	2 cut(s)	287, 656
MlyI	GAGTC	2 cut(s)	379, 631
MmeI	TCCRAC	2 cut(s)	551, 827
Mph1103I	ATGCAT	1 cut(s)	1012
MroXI	GAANNNNTTC	1 cut(s)	211
MseI	TTAA	2 cut(s)	1131, 1176
MslI	CAYNNNNRTG	1 cut(s)	1092
MspI	CCGG	5 cut(s)	280, 533, 704, 795, 967
MspR9I	CCNGG	6 cut(s)	704, 767, 796, 843, 897, 968
Mva1269I	GAATGC	3 cut(s)	70, 460, 1125
MvaI	CCWGG	3 cut(s)	767, 843, 897
MwoI	GCNNNNNNNGC	5 cut(s)	237, 386, 435, 447, 651
NciI	CCSGG	3 cut(s)	704, 796, 968
NdeII	GATC	3 cut(s)	572, 762, 864
NlaIII	CATG	3 cut(s)	202, 749, 1091
NlaIV	GGNNCC	4 cut(s)	326, 615, 859, 902
NmuCI	GTSAC	1 cut(s)	1151
NsiI	ATGCAT	1 cut(s)	1012
NspV	TTCGAA	1 cut(s)	873
PaeR7I	CTCGAG	1 cut(s)	731
PaqCI	CACCTGC	2 cut(s)	511, 556
PctI	GAATGC	3 cut(s)	70, 460, 1125
PdmI	GAANNNNTTC	1 cut(s)	211
PfeI	GAWTC	3 cut(s)	166, 479, 994
PflMI	CCANNNNNTGG	1 cut(s)	158
PkrI	GCNGC	7 cut(s)	391, 428, 440, 464, 553, 840, 1022
Ple19I	CGATCG	1 cut(s)	575
PleI	GAGTC	2 cut(s)	378, 631
PpsI	GAGTC	2 cut(s)	378, 631
PpuMI	RGGWCCY	1 cut(s)	258
PshAI	GACNNNNGTC	1 cut(s)	472
PsiI	TTATAA	1 cut(s)	131
Psp5II	RGGWCCY	1 cut(s)	258
Psp6I	CCWGG	3 cut(s)	765, 841, 895
PspEI	GGTNACC	1 cut(s)	1151
PspGI	CCWGG	3 cut(s)	765, 841, 895
PspN4I	GGNNCC	4 cut(s)	326, 615, 859, 902
PspPI	GGNCC	2 cut(s)	258, 613
PspPPI	RGGWCCY	1 cut(s)	258
PspXI	VCTCGAGB	1 cut(s)	731
PstNI	CAGNNNCTG	1 cut(s)	1217
PsuI	RGATCY	1 cut(s)	762
PvuI	CGATCG	1 cut(s)	575
RsaI	GTAC	1 cut(s)	902
RsaNI	GTAC	1 cut(s)	901
RseI	CAYNNNNRTG	1 cut(s)	1092
SaqAI	TTAA	2 cut(s)	1131, 1176
SatI	GCNGC	7 cut(s)	390, 427, 439, 463, 552, 839, 1021
Sau3AI	GATC	3 cut(s)	572, 762, 864
Sau96I	GGNCC	2 cut(s)	258, 613
SchI	GAGTC	2 cut(s)	379, 631
ScrFI	CCNGG	6 cut(s)	704, 767, 796, 843, 897, 968
SduI	GDGCHC	2 cut(s)	287, 656
SfaNI	GCATC	5 cut(s)	227, 515, 740, 952, 997
Sfr274I	CTCGAG	1 cut(s)	731
SfuI	TTCGAA	1 cut(s)	873
SinI	GGWCC	2 cut(s)	258, 613
SlaI	CTCGAG	1 cut(s)	731
SmiMI	CAYNNNNRTG	1 cut(s)	1092
SmlI	CTYRAG	2 cut(s)	265, 731
SmoI	CTYRAG	2 cut(s)	265, 731
SsiI	CCGC	7 cut(s)	439, 515, 519, 552, 567, 1004, 1159
SspI	AATATT	1 cut(s)	19
SspMI	CTAG	2 cut(s)	687, 774
StyD4I	CCNGG	6 cut(s)	702, 765, 794, 841, 895, 966
StyI	CCWWGG	2 cut(s)	105, 254
TaiI	ACGT	1 cut(s)	837
TaqII	GACCGA	1 cut(s)	353
TauI	GCSGC	2 cut(s)	441, 554
TfiI	GAWTC	3 cut(s)	166, 479, 994
Tru1I	TTAA	2 cut(s)	1131, 1176
Tru9I	TTAA	2 cut(s)	1131, 1176
TscAI	CASTG	1 cut(s)	1005
TseFI	GTSAC	1 cut(s)	1151
TseI	GCWGC	5 cut(s)	389, 426, 462, 838, 1020
Tsp45I	GTSAC	1 cut(s)	1151
TspDTI	ATGAA	3 cut(s)	288, 948, 1110
TspGWI	ACGGA	1 cut(s)	626
TspRI	CASTG	1 cut(s)	1005
Van91I	CCANNNNNTGG	1 cut(s)	158
VpaK11BI	GGWCC	2 cut(s)	258, 613
XagI	CCTNNNNNAGG	1 cut(s)	1041
XapI	RAATTY	2 cut(s)	295, 722
XhoI	CTCGAG	1 cut(s)	731
XmnI	GAANNNNTTC	1 cut(s)	211
XspI	CTAG	2 cut(s)	687, 774
Zsp2I	ATGCAT	1 cut(s)	1012

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.