Transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 125 |
| AccI | GTMKAC | 1 cut(s) | 96 |
| AccII | CGCG | 1 cut(s) | 126 |
| AciI | CCGC | 5 cut(s) | 52, 82, 124, 147, 251 |
| AcoI | YGGCCR | 2 cut(s) | 63, 102 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 72, 91 |
| AgsI | TTSAA | 2 cut(s) | 155, 307 |
| AluBI | AGCT | 2 cut(s) | 247, 298 |
| AluI | AGCT | 2 cut(s) | 247, 298 |
| AoxI | GGCC | 5 cut(s) | 63, 102, 109, 191, 231 |
| ApeKI | GCWGC | 2 cut(s) | 247, 295 |
| AspS9I | GGNCC | 4 cut(s) | 79, 110, 118, 192 |
| AvaII | GGWCC | 2 cut(s) | 79, 118 |
| BbvI | GCAGC | 2 cut(s) | 234, 307 |
| BceAI | ACGGC | 3 cut(s) | 78, 117, 238 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 187, 221 |
| BciVI | GTATCC | 1 cut(s) | 176 |
| BfaI | CTAG | 1 cut(s) | 275 |
| BfuI | GTATCC | 1 cut(s) | 176 |
| BisI | GCNGC | 3 cut(s) | 248, 251, 296 |
| BlsI | GCNGC | 3 cut(s) | 249, 252, 297 |
| Bme18I | GGWCC | 2 cut(s) | 79, 118 |
| BmgT120I | GGNCC | 4 cut(s) | 79, 110, 118, 192 |
| BmiI | GGNNCC | 2 cut(s) | 112, 260 |
| BsaJI | CCNNGG | 3 cut(s) | 114, 228, 254 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 72, 91 |
| Bse118I | RCCGGY | 1 cut(s) | 189 |
| BseDI | CCNNGG | 3 cut(s) | 114, 228, 254 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 72, 91 |
| BseXI | GCAGC | 2 cut(s) | 234, 307 |
| BseYI | CCCAGC | 1 cut(s) | 194 |
| Bsh1236I | CGCG | 1 cut(s) | 126 |
| Bsh1285I | CGRYCG | 1 cut(s) | 190 |
| BshFI | GGCC | 5 cut(s) | 65, 104, 111, 193, 233 |
| BsiEI | CGRYCG | 1 cut(s) | 190 |
| BsiSI | CCGG | 1 cut(s) | 190 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 72, 91 |
| BsnI | GGCC | 5 cut(s) | 65, 104, 111, 193, 233 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspACI | CCGC | 5 cut(s) | 52, 82, 124, 147, 251 |
| BspANI | GGCC | 5 cut(s) | 65, 104, 111, 193, 233 |
| BspFNI | CGCG | 1 cut(s) | 126 |
| BspLI | GGNNCC | 2 cut(s) | 112, 260 |
| BsrFI | RCCGGY | 1 cut(s) | 189 |
| BssAI | RCCGGY | 1 cut(s) | 189 |
| BssECI | CCNNGG | 3 cut(s) | 114, 228, 254 |
| BssMI | GATC | 1 cut(s) | 172 |
| BssT1I | CCWWGG | 2 cut(s) | 114, 228 |
| BstC8I | GCNNGC | 2 cut(s) | 135, 300 |
| BstDSI | CCRYGG | 1 cut(s) | 254 |
| BstFNI | CGCG | 1 cut(s) | 126 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMCI | CGRYCG | 1 cut(s) | 190 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 175 |
| BstNSI | RCATGY | 1 cut(s) | 169 |
| BstUI | CGCG | 1 cut(s) | 126 |
| BstV1I | GCAGC | 2 cut(s) | 234, 307 |
| BsuI | GTATCC | 1 cut(s) | 176 |
| BsuRI | GGCC | 5 cut(s) | 65, 104, 111, 193, 233 |
| BtgI | CCRYGG | 1 cut(s) | 254 |
| BtsIMutI | CAGTG | 1 cut(s) | 66 |
| Cac8I | GCNNGC | 2 cut(s) | 135, 300 |
| Cfr10I | RCCGGY | 1 cut(s) | 189 |
| Cfr13I | GGNCC | 4 cut(s) | 79, 110, 118, 192 |
| CseI | GACGC | 1 cut(s) | 115 |
| CviAII | CATG | 1 cut(s) | 166 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 125 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 125 |
| EaeI | YGGCCR | 2 cut(s) | 63, 102 |
| Eco130I | CCWWGG | 2 cut(s) | 114, 228 |
| Eco47I | GGWCC | 2 cut(s) | 79, 118 |
| EcoO109I | RGGNCCY | 1 cut(s) | 110 |
| EcoT14I | CCWWGG | 2 cut(s) | 114, 228 |
| ErhI | CCWWGG | 2 cut(s) | 114, 228 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 4 cut(s) | 9, 167, 236, 284 |
| FatI | CATG | 1 cut(s) | 165 |
| FblI | GTMKAC | 1 cut(s) | 96 |
| Fnu4HI | GCNGC | 3 cut(s) | 248, 251, 296 |
| Fsp4HI | GCNGC | 3 cut(s) | 248, 251, 296 |
| FspBI | CTAG | 1 cut(s) | 275 |
| GluI | GCNGC | 3 cut(s) | 248, 251, 296 |
| GsaI | CCCAGC | 1 cut(s) | 198 |
| HaeIII | GGCC | 5 cut(s) | 65, 104, 111, 193, 233 |
| HapII | CCGG | 1 cut(s) | 190 |
| HgaI | GACGC | 1 cut(s) | 115 |
| Hin1II | CATG | 1 cut(s) | 169 |
| HpaII | CCGG | 1 cut(s) | 190 |
| Hpy166II | GTNNAC | 1 cut(s) | 97 |
| Hpy188I | TCNGA | 1 cut(s) | 182 |
| Hpy188III | TCNNGA | 1 cut(s) | 220 |
| Hpy8I | GTNNAC | 1 cut(s) | 97 |
| Hpy99I | CGWCG | 1 cut(s) | 245 |
| HpyAV | CCTTC | 1 cut(s) | 70 |
| HpyCH4V | TGCA | 4 cut(s) | 11, 169, 295, 302 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 175 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 4 cut(s) | 58, 115, 203, 208 |
| Lsp1109I | GCAGC | 2 cut(s) | 234, 307 |
| MaeI | CTAG | 1 cut(s) | 275 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 2 cut(s) | 27, 298 |
| MluCI | AATT | 1 cut(s) | 155 |
| MnlI | CCTC | 2 cut(s) | 53, 148 |
| MspI | CCGG | 1 cut(s) | 190 |
| MvnI | CGCG | 1 cut(s) | 126 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 175 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NlaIV | GGNNCC | 2 cut(s) | 112, 260 |
| NspI | RCATGY | 1 cut(s) | 169 |
| PkrI | GCNGC | 3 cut(s) | 249, 252, 297 |
| PspFI | CCCAGC | 1 cut(s) | 194 |
| PspN4I | GGNNCC | 2 cut(s) | 112, 260 |
| PspPI | GGNCC | 4 cut(s) | 79, 110, 118, 192 |
| SatI | GCNGC | 3 cut(s) | 248, 251, 296 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| Sau96I | GGNCC | 4 cut(s) | 79, 110, 118, 192 |
| SetI | ASST | 4 cut(s) | 45, 96, 249, 300 |
| SinI | GGWCC | 2 cut(s) | 79, 118 |
| Sse9I | AATT | 1 cut(s) | 155 |
| SsiI | CCGC | 5 cut(s) | 52, 82, 124, 147, 251 |
| SspMI | CTAG | 1 cut(s) | 275 |
| StyI | CCWWGG | 2 cut(s) | 114, 228 |
| TaqI | TCGA | 2 cut(s) | 207, 240 |
| TasI | AATT | 1 cut(s) | 155 |
| TauI | GCSGC | 1 cut(s) | 253 |
| TscAI | CASTG | 1 cut(s) | 73 |
| TseI | GCWGC | 2 cut(s) | 247, 295 |
| TspDTI | ATGAA | 1 cut(s) | 299 |
| TspRI | CASTG | 1 cut(s) | 73 |
| VpaK11BI | GGWCC | 2 cut(s) | 79, 118 |
| XceI | RCATGY | 1 cut(s) | 169 |
| XmiI | GTMKAC | 1 cut(s) | 96 |
| XspI | CTAG | 1 cut(s) | 275 |