Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002017.1

Orthogroup ID

OG0000293

Physical Location & Seq

Genomic Coordinates Forward (+)

11135 .. 12942

Gene Structure 1808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002017.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ctgaagctgagccatcatcaaaagtacacccaaaacttgtgtgatgggttagcctggcgacagagctggtttcagaaatcccagaacaccagctggagatcatcatcatcatcaacatcagaaaaagcattaggcaaattgagagctgggaaagtagagattcagaaacccaataagcaaaagttgattcttgttgtagctaaaaataagtacaggtctagtactactcctcccgctgctgctactgttccattaaaagctggaaaaggaaactcacagtaccctcattcttctacttcaaccaccgctttcggagaacccaccatcgaatatgcaggaagaaaaatgggggagagccacagcaacctccaccaccgcgcaacgacgtcgccctccgctgcttctcggttgggtttggggataaggactgcttcttcctccaccaccagcgagatcgtggaggctcgaggccacattctaagggccaccggccgcaaggaccgccacagcaaggtgcagaccgccaaaggccccagggaccgccgcgtccggctggccgcgcacaccgccattcaattctacgacgtgcaggaccggctcggatacgaccggcccagcaaggccgtcgattggctcatcaagaaagccaaggccgcaatagacgagctcgacgagctgccgccgtggaacccgaactcaatttctgttcagacaacatcttctccgacggtgccgatatccgcggcgcaggacacgcagaacgcgagcctccatttctcgatgatggaggctccgagttctttgtctgctaatcggcgaggcgcaatggtgggtagcagcggagtggcggagctggtgaatcagaacagctcgaattttctgccgccgtcgatggactcggactcaattgcagatactatcaagtctttcttcccaatgggtgcggcgacggcggccgaaacgcagtcgtttcaccccgccagctacccgccggatttgctgtccagaaccagcagccagagccaagatctgcgactgtctctccagtctttccaagacccaattcttctccaccaccaccaccaagctcatcatcatcatcagacccatcacgaaaatgagcaagcttttcttacaccaaaccatctcgggtttgatagctccgcctccacgtggacagagcaccaccaccaacagcagcagcagcaggcggagctcaacaggttccagagaatggtggcttggaacaatgcgggtggtgatagcaacaacaacggcggcggtggtggagttgagtttacattcaactcgcaaccgcagactcaatcgcagtcgccgactctgcagccgttcttgttcggccaaaaccagttcttttcttcacagaggggaccccttcagtccagtaacacgccttcggttcatgcctggatcgaccacagcgacctttcggaccatcaacatcagatggcgccgtcaatccaaaaccaccaccaccatcatcatcatcaacagtcttccatttccggcatgggattcgcctccggcggattctccggcttccaaattccggcacgaatccagggcgaggaggagcacgacggcatctcagacaagccgtcctctgcttcctccaattctcgccattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040034 GO:0042221 GO:0045962 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TCP

Protein Analysis

549

Amino Acids

60.25

Weight (kDa)

9.33

Isoelectric Point (pI)

53.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000293)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53230 AT1G53230 AT3G15030 AT3G15030 AT3G15030 AT3G15030
fragaria_vesca	FvH4_3g08160 FvH4_3g18740
malus_domestica	MD03G1239100.v1.1 MD05G1305100.v1.1 MD11G1258900.v1.1
prunus_persica	Prupe.4G057100_v2.0.a1 Prupe.4G171100_v2.0.a1
pyrus_communis	pycom03g18430 pycom11g22850
rosa_chinensis	RchiOBHm_Chr4g0418991 RchiOBHm_Chr4g0420791 RchiOBHm_Chr5g0010031 RchiOBHm_Chr5g0031541
rosa_laevigata	RLG00000013430 RLG00000015337 RLG00000031720 RLG00000033322 RLG00000035733
rosa_multiflora	Rmu_co8053810.1_g000001 Rmu_co8138760.1_g000001 Rmu_co8175406.1_g000001 Rmu_co8265597.1_g000001 Rmu_sc0000090.1_g000007 Rmu_sc0000115.1_g000024 Rmu_sc0000288.1_g000014 Rmu_sc0000324.1_g000023 Rmu_sc0000423.1_g000011 Rmu_sc0000438.1_g000001 Rmu_sc0000516.1_g000051 Rmu_sc0000524.1_g000034 Rmu_sc0000530.1_g000034 Rmu_sc0000550.1_g000022 Rmu_sc0000631.1_g000026 Rmu_sc0000861.1_g000047 Rmu_sc0000861.1_g000062 Rmu_sc0001036.1_g000040 Rmu_sc0001258.1_g000009 Rmu_sc0001353.1_g000029 Rmu_sc0001374.1_g000048 Rmu_sc0001426.1_g000012 Rmu_sc0001526.1_g000046 Rmu_sc0001684.1_g000011 Rmu_sc0001689.1_g000026 Rmu_sc0001706.1_g000025 Rmu_sc0002017.1_g000004 Rmu_sc0002060.1_g000008 Rmu_sc0002260.1_g000006 Rmu_sc0002275.1_g000007 Rmu_sc0002340.1_g000004 Rmu_sc0003556.1_g000029 Rmu_sc0003610.1_g000044 Rmu_sc0003690.1_g000002 Rmu_sc0004189.1_g000026 Rmu_sc0004250.1_g000041 Rmu_sc0004435.1_g000005 Rmu_sc0004621.1_g000008 Rmu_sc0004947.1_g000031 Rmu_sc0004972.1_g000008 Rmu_sc0005791.1_g000017 Rmu_sc0005812.1_g000007 Rmu_sc0006170.1_g000002 Rmu_sc0006297.1_g000003 Rmu_sc0006435.1_g000006 Rmu_sc0006455.1_g000002 Rmu_sc0006792.1_g000018 Rmu_sc0007904.1_g000002 Rmu_sc0008081.1_g000008 Rmu_sc0008698.1_g000010 Rmu_sc0011940.1_g000008 Rmu_sc0012051.1_g000001 Rmu_sc0013001.1_g000012 Rmu_sc0017665.1_g000008 Rmu_sc0021290.1_g000002 Rmu_sc0023961.1_g000001 Rmu_sc0025647.1_g000001 Rmu_sc0030540.1_g000003 Rmu_sc0030935.1_g000001 Rmu_sc0030936.1_g000002 Rmu_sc0040629.1_g000001 Rmu_sc0040630.1_g000001 Rmu_ssc0000018.1_g000003 Rmu_ssc0000093.1_g000019 Rmu_ssc0000372.1_g000047 Rmu_ssc0000472.1_g000004
rosa_roxburghii	Rroxscaffold_1G00010400 Rroxscaffold_1G00048760 Rroxscaffold_1G00066140 Rroxscaffold_2G00087730 Rroxscaffold_2G00114360 Rroxscaffold_2G00129990 Rroxscaffold_5G00344710 Rroxscaffold_5G00356030 Rroxscaffold_5G00377440 Rroxscaffold_6G00391660 Rroxscaffold_7G00175440 Rroxscaffold_7G00190080 Rroxscaffold_7G00190400
rosa_rugosa	Rorug02G0056400 Rorug02G0133600 Rorug02G0314600 Rorug02G0407100 Rorug02G0623700 Rorug03G0182200.1 Rorug03G0369500.1 Rorug04G0335800 Rorug04G0422400.1 Rorug04G0448800 Rorug05G0127000 Rorug06G0289000 Rorug07G0333100
rosa_samantha	Rh5AG079500 Rh5CG086900 Rh5DG075000 Rh5DG240600 Rh6DG251700
rosa_wichuraiana	Rw5G007360 Rw5G020060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	545
AatII	GACGTC	1 cut(s)	389
AccB1I	GGYRCC	2 cut(s)	730, 1471
AccB7I	CCANNNNNTGG	1 cut(s)	1234
AccII	CGCG	5 cut(s)	378, 546, 560, 743, 764
AclWI	GGATC	1 cut(s)	1439
AcoI	YGGCCR	4 cut(s)	490, 555, 954, 1360
AcsI	RAATTY	2 cut(s)	874, 1566
AcuI	CTGAAG	2 cut(s)	23, 1382
AcvI	CACGTG	1 cut(s)	1173
AcyI	GRCGYC	2 cut(s)	386, 1472
AfaI	GTAC	4 cut(s)	26, 212, 223, 281
AfiI	CCNNNNNNNGG	6 cut(s)	511, 630, 1173, 1234, 1570, 1588
AgsI	TTSAA	3 cut(s)	300, 575, 1306
AhdI	GACNNNNNGTC	1 cut(s)	1618
AjiI	CACGTC	1 cut(s)	586
AjnI	CCWGG	4 cut(s)	53, 533, 1427, 1581
AjuI	GAANNNNNNNTTGG	4 cut(s)	1047, 1079, 1225, 1257
Alw21I	GWGCWC	4 cut(s)	669, 1185, 1218, 1599
Alw26I	GTCTC	1 cut(s)	1044
AlwI	GGATC	1 cut(s)	1439
Ama87I	CYCGRG	2 cut(s)	465, 1148
ApoI	RAATTY	2 cut(s)	874, 1566
AspLEI	GCGC	5 cut(s)	380, 562, 748, 824, 1474
AspS9I	GGNCC	8 cut(s)	483, 499, 530, 538, 592, 612, 1391, 1453
AsuHPI	GGTGA	3 cut(s)	868, 965, 1271
AvaI	CYCGRG	2 cut(s)	465, 1148
AvaII	GGWCC	5 cut(s)	499, 538, 592, 1391, 1453
BanI	GGYRCC	2 cut(s)	730, 1471
BanII	GRGCYC	2 cut(s)	669, 1218
BarI	GAAGNNNNNNTAC	2 cut(s)	1399, 1431
BbrPI	CACGTG	1 cut(s)	1173
BbsI	GAAGAC	1 cut(s)	1509
Bbv12I	GWGCWC	4 cut(s)	669, 1185, 1218, 1599
BceAI	ACGGC	9 cut(s)	608, 667, 871, 966, 1291, 1333, 1459, 1603, 1618
BcgI	CGANNNNNNTGC	8 cut(s)	369, 403, 607, 641, 862, 896, 1519, 1553
BciT130I	CCWGG	4 cut(s)	55, 535, 1429, 1583
BciVI	GTATCC	1 cut(s)	596
BcoDI	GTCTC	1 cut(s)	1044
BfaI	CTAG	1 cut(s)	219
BfmI	CTRYAG	1 cut(s)	1343
BfoI	RGCGCY	1 cut(s)	1475
BfuI	GTATCC	1 cut(s)	596
BglII	AGATCT	1 cut(s)	1027
BlpI	GCTNAGC	1 cut(s)	8
BmcAI	AGTACT	1 cut(s)	223
Bme1390I	CCNGG	4 cut(s)	55, 535, 1429, 1583
Bme18I	GGWCC	5 cut(s)	499, 538, 592, 1391, 1453
BmeRI	GACNNNNNGTC	1 cut(s)	1618
BmeT110I	CYCGRG	2 cut(s)	465, 1148
BmgBI	CACGTC	1 cut(s)	586
BmgT120I	GGNCC	8 cut(s)	483, 499, 530, 538, 592, 612, 1391, 1453
BmiI	GGNNCC	9 cut(s)	532, 539, 689, 732, 792, 1226, 1392, 1393, 1473
BmrFI	CCNGG	4 cut(s)	55, 535, 1429, 1583
BmsI	GCATC	1 cut(s)	1614
BpiI	GAAGAC	1 cut(s)	1509
BpmI	CTGGAG	2 cut(s)	115, 1028
Bpu1102I	GCTNAGC	1 cut(s)	8
BsaAI	YACGTR	1 cut(s)	1173
BsaBI	GATNNNNATC	1 cut(s)	103
BsaHI	GRCGYC	2 cut(s)	386, 1472
BsaJI	CCNNGG	6 cut(s)	533, 534, 648, 683, 741, 1582
BsaXI	ACNNNNNCTCC	6 cut(s)	214, 244, 706, 736, 1026, 1056
Bsc4I	CCNNNNNNNGG	6 cut(s)	511, 630, 1173, 1234, 1570, 1588
Bse118I	RCCGGY	3 cut(s)	488, 594, 609
Bse1I	ACTGG	3 cut(s)	1045, 1369, 1404
Bse3DI	GCAATG	1 cut(s)	831
Bse8I	GATNNNNATC	1 cut(s)	103
BseBI	CCWGG	4 cut(s)	55, 535, 1429, 1583
BseDI	CCNNGG	6 cut(s)	533, 534, 648, 683, 741, 1582
BseJI	GATNNNNATC	1 cut(s)	103
BseLI	CCNNNNNNNGG	6 cut(s)	511, 630, 1173, 1234, 1570, 1588
BseMI	GCAATG	1 cut(s)	831
BseMII	CTCAG	1 cut(s)	1623
BseNI	ACTGG	3 cut(s)	1045, 1369, 1404
BseRI	GAGGAG	3 cut(s)	219, 1604, 1607
BseX3I	CGGCCG	2 cut(s)	490, 954
BseYI	CCCAGC	2 cut(s)	146, 614
BsgI	GTGCAG	2 cut(s)	536, 608
Bsh1236I	CGCG	5 cut(s)	378, 546, 560, 743, 764
Bsh1285I	CGRYCG	3 cut(s)	493, 610, 957
BshNI	GGYRCC	2 cut(s)	730, 1471
BsiEI	CGRYCG	3 cut(s)	493, 610, 957
BsiHKAI	GWGCWC	4 cut(s)	669, 1185, 1218, 1599
BsiHKCI	CYCGRG	2 cut(s)	465, 1148
BsiSI	CCGG	9 cut(s)	489, 550, 595, 610, 992, 1527, 1545, 1557, 1571
BslFI	GGGAC	2 cut(s)	551, 1404
BslI	CCNNNNNNNGG	6 cut(s)	511, 630, 1173, 1234, 1570, 1588
BsmAI	GTCTC	1 cut(s)	1044
BsmFI	GGGAC	2 cut(s)	551, 1404
BsoBI	CYCGRG	2 cut(s)	465, 1148
Bsp1286I	GDGCHC	4 cut(s)	669, 1185, 1218, 1599
Bsp143I	GATC	4 cut(s)	98, 453, 1027, 1431
Bsp1720I	GCTNAGC	1 cut(s)	8
BspCNI	CTCAG	1 cut(s)	1622
BspFNI	CGCG	5 cut(s)	378, 546, 560, 743, 764
BspLI	GGNNCC	9 cut(s)	532, 539, 689, 732, 792, 1226, 1392, 1393, 1473
BspMAI	CTGCAG	1 cut(s)	1347
BspPI	GGATC	1 cut(s)	1439
BspT107I	GGYRCC	2 cut(s)	730, 1471
BsrDI	GCAATG	1 cut(s)	831
BsrFI	RCCGGY	3 cut(s)	488, 594, 609
BsrI	ACTGG	3 cut(s)	1045, 1369, 1404
BssAI	RCCGGY	3 cut(s)	488, 594, 609
BssECI	CCNNGG	6 cut(s)	533, 534, 648, 683, 741, 1582
BssMI	GATC	4 cut(s)	98, 453, 1027, 1431
BssNI	GRCGYC	2 cut(s)	386, 1472
BssT1I	CCWWGG	1 cut(s)	648
Bst2UI	CCWGG	4 cut(s)	55, 535, 1429, 1583
Bst4CI	ACNGT	5 cut(s)	247, 279, 730, 1038, 1515
BstACI	GRCGYC	2 cut(s)	386, 1472
BstBAI	YACGTR	1 cut(s)	1173
BstC8I	GCNNGC	5 cut(s)	555, 766, 982, 1125, 1209
BstDEI	CTNAG	3 cut(s)	8, 479, 1609
BstDSI	CCRYGG	2 cut(s)	683, 741
BstFNI	CGCG	5 cut(s)	378, 546, 560, 743, 764
BstH2I	RGCGCY	1 cut(s)	1475
BstHHI	GCGC	5 cut(s)	380, 562, 748, 824, 1474
BstKTI	GATC	4 cut(s)	101, 456, 1030, 1434
BstMAI	GTCTC	1 cut(s)	1044
BstMBI	GATC	4 cut(s)	98, 453, 1027, 1431
BstMCI	CGRYCG	3 cut(s)	493, 610, 957
BstNI	CCWGG	4 cut(s)	55, 535, 1429, 1583
BstSCI	CCNGG	4 cut(s)	53, 533, 1427, 1581
BstSFI	CTRYAG	1 cut(s)	1343
BstUI	CGCG	5 cut(s)	378, 546, 560, 743, 764
BstV2I	GAAGAC	1 cut(s)	1509
BstX2I	RGATCY	1 cut(s)	1027
BstYI	RGATCY	1 cut(s)	1027
BstZI	CGGCCG	2 cut(s)	490, 954
BsuI	GTATCC	1 cut(s)	596
BtgI	CCRYGG	2 cut(s)	683, 741
BtrI	CACGTC	1 cut(s)	586
Cac8I	GCNNGC	5 cut(s)	555, 766, 982, 1125, 1209
CfoI	GCGC	5 cut(s)	380, 562, 748, 824, 1474
Cfr10I	RCCGGY	3 cut(s)	488, 594, 609
Cfr13I	GGNCC	8 cut(s)	483, 499, 530, 538, 592, 612, 1391, 1453
Cfr42I	CCGCGG	1 cut(s)	744
CseI	GACGC	1 cut(s)	535
Csp6I	GTAC	4 cut(s)	25, 211, 222, 280
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CviAII	CATG	2 cut(s)	1424, 1531
CviQI	GTAC	4 cut(s)	25, 211, 222, 280
DdeI	CTNAG	3 cut(s)	8, 479, 1609
DinI	GGCGCC	1 cut(s)	1473
DpnI	GATC	4 cut(s)	100, 455, 1029, 1433
DpnII	GATC	4 cut(s)	98, 453, 1027, 1431
DrdI	GACNNNNNNGTC	1 cut(s)	545
DriI	GACNNNNNGTC	1 cut(s)	1618
DseDI	GACNNNNNNGTC	1 cut(s)	545
EaeI	YGGCCR	4 cut(s)	490, 555, 954, 1360
EagI	CGGCCG	2 cut(s)	490, 954
Eam1105I	GACNNNNNGTC	1 cut(s)	1618
EciI	GGCGGA	4 cut(s)	863, 1153, 1226, 1563
Ecl136II	GAGCTC	2 cut(s)	667, 1216
EclXI	CGGCCG	2 cut(s)	490, 954
Eco130I	CCWWGG	1 cut(s)	648
Eco24I	GRGCYC	2 cut(s)	669, 1218
Eco32I	GATATC	1 cut(s)	738
Eco47I	GGWCC	5 cut(s)	499, 538, 592, 1391, 1453
Eco52I	CGGCCG	2 cut(s)	490, 954
Eco53kI	GAGCTC	2 cut(s)	667, 1216
Eco57I	CTGAAG	2 cut(s)	23, 1382
Eco72I	CACGTG	1 cut(s)	1173
Eco88I	CYCGRG	2 cut(s)	465, 1148
EcoICRI	GAGCTC	2 cut(s)	667, 1216
EcoO109I	RGGNCCY	2 cut(s)	530, 1391
EcoRII	CCWGG	4 cut(s)	53, 533, 1427, 1581
EcoRV	GATATC	1 cut(s)	738
EcoT14I	CCWWGG	1 cut(s)	648
EcoT38I	GRGCYC	2 cut(s)	669, 1218
EgeI	GGCGCC	1 cut(s)	1473
EheI	GGCGCC	1 cut(s)	1473
ErhI	CCWWGG	1 cut(s)	648
FaeI	CATG	2 cut(s)	1427, 1534
FaiI	YATR	3 cut(s)	333, 1425, 1532
FalI	AAGNNNNNCTT	6 cut(s)	415, 447, 914, 946, 1116, 1148
FaqI	GGGAC	2 cut(s)	551, 1404
FatI	CATG	2 cut(s)	1423, 1530
FauI	CCCGC	4 cut(s)	241, 985, 996, 1246
FriOI	GRGCYC	2 cut(s)	669, 1218
FspBI	CTAG	1 cut(s)	219
GlaI	GCGC	5 cut(s)	379, 561, 747, 823, 1473
GsaI	CCCAGC	2 cut(s)	150, 618
GsuI	CTGGAG	2 cut(s)	115, 1028
HaeII	RGCGCY	1 cut(s)	1475
HapII	CCGG	9 cut(s)	489, 550, 595, 610, 992, 1527, 1545, 1557, 1571
HgaI	GACGC	1 cut(s)	535
HhaI	GCGC	5 cut(s)	380, 562, 748, 824, 1474
Hin1I	GRCGYC	2 cut(s)	386, 1472
Hin1II	CATG	2 cut(s)	1427, 1534
Hin6I	GCGC	5 cut(s)	378, 560, 746, 822, 1472
HinP1I	GCGC	5 cut(s)	378, 560, 746, 822, 1472
HindIII	AAGCTT	1 cut(s)	1125
HpaII	CCGG	9 cut(s)	489, 550, 595, 610, 992, 1527, 1545, 1557, 1571
HphI	GGTGA	3 cut(s)	868, 965, 1271
Hpy166II	GTNNAC	3 cut(s)	27, 1176, 1299
Hpy188III	TCNNGA	5 cut(s)	640, 778, 1005, 1112, 1228
Hpy8I	GTNNAC	3 cut(s)	27, 1176, 1299
Hpy99I	CGWCG	9 cut(s)	388, 391, 587, 629, 674, 730, 892, 952, 1604
HpyAV	CCTTC	2 cut(s)	1406, 1425
HpyCH4III	ACNGT	5 cut(s)	247, 279, 730, 1038, 1515
HpyCH4IV	ACGT	3 cut(s)	386, 585, 1172
HpyCH4V	TGCA	5 cut(s)	335, 517, 589, 911, 1345
HpyF3I	CTNAG	3 cut(s)	8, 479, 1609
HpySE526I	ACGT	3 cut(s)	386, 585, 1172
Hsp92I	GRCGYC	2 cut(s)	386, 1472
Hsp92II	CATG	2 cut(s)	1427, 1534
HspAI	GCGC	5 cut(s)	378, 560, 746, 822, 1472
KasI	GGCGCC	1 cut(s)	1471
KflI	GGGWCCC	1 cut(s)	1391
KspI	CCGCGG	1 cut(s)	744
Kzo9I	GATC	4 cut(s)	98, 453, 1027, 1431
LmnI	GCTCC	5 cut(s)	796, 850, 1166, 1213, 1594
LweI	GCATC	1 cut(s)	1614
MaeI	CTAG	1 cut(s)	219
MaeII	ACGT	3 cut(s)	386, 585, 1172
MaeIII	GTNAC	1 cut(s)	1406
MalI	GATC	4 cut(s)	100, 455, 1029, 1433
MboI	GATC	4 cut(s)	98, 453, 1027, 1431
MboII	GAAGA	8 cut(s)	282, 351, 426, 711, 922, 1058, 1371, 1509
MfeI	CAATTG	1 cut(s)	906
MflI	RGATCY	1 cut(s)	1027
MhlI	GDGCHC	4 cut(s)	669, 1185, 1218, 1599
MluCI	AATT	8 cut(s)	137, 575, 699, 874, 906, 1062, 1566, 1636
Mly113I	GGCGCC	1 cut(s)	1472
MlyI	GAGTC	4 cut(s)	890, 896, 1315, 1333
MmeI	TCCRAC	1 cut(s)	749
MseI	TTAA	1 cut(s)	254
MslI	CAYNNNNRTG	1 cut(s)	1116
MspA1I	CMGCKG	5 cut(s)	93, 236, 398, 743, 840
MspI	CCGG	9 cut(s)	489, 550, 595, 610, 992, 1527, 1545, 1557, 1571
MspR9I	CCNGG	4 cut(s)	55, 535, 1429, 1583
MunI	CAATTG	1 cut(s)	906
MvaI	CCWGG	4 cut(s)	55, 535, 1429, 1583
MvnI	CGCG	5 cut(s)	378, 546, 560, 743, 764
NarI	GGCGCC	1 cut(s)	1472
NdeII	GATC	4 cut(s)	98, 453, 1027, 1431
NlaIII	CATG	2 cut(s)	1427, 1534
NlaIV	GGNNCC	9 cut(s)	532, 539, 689, 732, 792, 1226, 1392, 1393, 1473
PaeR7I	CTCGAG	1 cut(s)	465
PasI	CCCWGGG	1 cut(s)	534
PcsI	WCGNNNNNNNCGW	4 cut(s)	669, 761, 1334, 1440
PfeI	GAWTC	6 cut(s)	160, 187, 859, 1536, 1551, 1578
PflMI	CCANNNNNTGG	1 cut(s)	1234
PleI	GAGTC	4 cut(s)	890, 896, 1315, 1333
PluTI	GGCGCC	1 cut(s)	1475
PmaCI	CACGTG	1 cut(s)	1173
PmlI	CACGTG	1 cut(s)	1173
PpsI	GAGTC	4 cut(s)	890, 896, 1315, 1333
Ppu21I	YACGTR	1 cut(s)	1173
PpuMI	RGGWCCY	1 cut(s)	1391
Psp124BI	GAGCTC	2 cut(s)	669, 1218
Psp5II	RGGWCCY	1 cut(s)	1391
Psp6I	CCWGG	4 cut(s)	53, 533, 1427, 1581
PspCI	CACGTG	1 cut(s)	1173
PspFI	CCCAGC	2 cut(s)	146, 614
PspGI	CCWGG	4 cut(s)	53, 533, 1427, 1581
PspN4I	GGNNCC	9 cut(s)	532, 539, 689, 732, 792, 1226, 1392, 1393, 1473
PspPI	GGNCC	8 cut(s)	483, 499, 530, 538, 592, 612, 1391, 1453
PspPPI	RGGWCCY	1 cut(s)	1391
PspXI	VCTCGAGB	1 cut(s)	465
PstI	CTGCAG	1 cut(s)	1347
PsuI	RGATCY	1 cut(s)	1027
PvuII	CAGCTG	1 cut(s)	93
RsaI	GTAC	4 cut(s)	26, 212, 223, 281
RsaNI	GTAC	4 cut(s)	25, 211, 222, 280
RseI	CAYNNNNRTG	1 cut(s)	1116
SacI	GAGCTC	2 cut(s)	669, 1218
SacII	CCGCGG	1 cut(s)	744
SaqAI	TTAA	1 cut(s)	254
Sau3AI	GATC	4 cut(s)	98, 453, 1027, 1431
Sau96I	GGNCC	8 cut(s)	483, 499, 530, 538, 592, 612, 1391, 1453
ScaI	AGTACT	1 cut(s)	223
SchI	GAGTC	4 cut(s)	890, 896, 1315, 1333
ScrFI	CCNGG	4 cut(s)	55, 535, 1429, 1583
SduI	GDGCHC	4 cut(s)	669, 1185, 1218, 1599
SfaNI	GCATC	1 cut(s)	1614
SfcI	CTRYAG	1 cut(s)	1343
SfoI	GGCGCC	1 cut(s)	1473
Sfr274I	CTCGAG	1 cut(s)	465
Sfr303I	CCGCGG	1 cut(s)	744
SgrBI	CCGCGG	1 cut(s)	744
SinI	GGWCC	5 cut(s)	499, 538, 592, 1391, 1453
SlaI	CTCGAG	1 cut(s)	465
SmiMI	CAYNNNNRTG	1 cut(s)	1116
SmlI	CTYRAG	1 cut(s)	465
SmoI	CTYRAG	1 cut(s)	465
Sse9I	AATT	8 cut(s)	137, 575, 699, 874, 906, 1062, 1566, 1636
SspDI	GGCGCC	1 cut(s)	1471
SspMI	CTAG	1 cut(s)	219
SstI	GAGCTC	2 cut(s)	669, 1218
StyD4I	CCNGG	4 cut(s)	53, 533, 1427, 1581
StyI	CCWWGG	1 cut(s)	648
TaaI	ACNGT	5 cut(s)	247, 279, 730, 1038, 1515
TaiI	ACGT	3 cut(s)	389, 588, 1175
TaqI	TCGA	8 cut(s)	327, 466, 627, 669, 779, 872, 890, 1434
TasI	AATT	8 cut(s)	137, 575, 699, 874, 906, 1062, 1566, 1636
TatI	WGTACW	3 cut(s)	24, 210, 221
TfiI	GAWTC	6 cut(s)	160, 187, 859, 1536, 1551, 1578
Tru1I	TTAA	1 cut(s)	254
Tru9I	TTAA	1 cut(s)	254
TspDTI	ATGAA	1 cut(s)	1412
Van91I	CCANNNNNTGG	1 cut(s)	1234
VpaK11BI	GGWCC	5 cut(s)	499, 538, 592, 1391, 1453
XapI	RAATTY	2 cut(s)	874, 1566
XcmI	CCANNNNNNNNNTGG	2 cut(s)	454, 1528
XhoI	CTCGAG	1 cut(s)	465
XspI	CTAG	1 cut(s)	219
ZraI	GACGTC	1 cut(s)	387
ZrmI	AGTACT	1 cut(s)	223

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.