FvH4_3g23821

ribonuclease H protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000607
Physical Location & Seq
Reverse (-)
16902603 .. 16906866
4264 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g23821.t1

Sequence Viewer

Length: 1362 bp
ATGTGGGATATTACAATCCACCCCCCTTGGGAGTCCGACGCCCTCGTCGGCACACTCGCACCACACGGCAGAGTGGCTCCGATACCATTTGTCACGTCCCGGGACCCGCTCCGCCGTAACACGATATTGTCCGCTTTGGGCCCACCGGCCCTCACGGTTTTGTTTCCAGCAGCTCAGGAGCAGCTTCCCAGGAGCTCAGGAGCAACTTCCCAGGAGGTCACCCATCCTGGGATTGCTCTAGCATCAACATGCTTAACCTCGGAGTACCCATCCCCTCCGAAGCCGCTGAGCCACCAAAAGGCCTCGTGCTTAGAATTGGAGTTTGTGTTGGTCATGAAAGTTGTAGAGGAGATTGAGAGGAAGATTCTGTTAAAATTTGGTGGCATTTGCAGGTTGCCGGAGTTGGTCGCCGGCCGCCGCTGCCGGCGGAGCCGCCGGCGGCGCCGCCGCTGTTTTGGGAAATTTTATGTAACTGATGGAAAGGAAGATCTGGATGAGATCGACCTCCGTACCCAATATTTTTGGATCCGGATTAGAGGTTTACCGCCGGCGTATTTGAGGGATGGGGCAGTGGAGAGTACTGGACGTTGCATGGGGCAAGCAATTGGTGTGTTCGTAAACGCGCGCCAGAGTTGCAAACAATTGGCTTTGTCAGATCTAGGTCAGGAGATGGATAAAGGTGATCCCCGGGAAGGAGAGAATGACATGGAGGTAGATAGCTGTCAGGAGCACTCTGATTTTGATATGCGCGGCGGTAAGAGGCGGAGATTTGGAGATCCCGGTGCTAGCAGGTCACTGAAGACGGTGAAGGGGGGAATTACGCATGCAGAATCTACTGCATTGATTAACTCCCATTTTCAGAGAGAGAAATCTGGGCGGGTGATTAGTTTTGATACAGAAGGTGGATTAATGAGCCAAGCGCTAATTGTGCCACATCTTGACAAGGAGGAAAAGGAAAAGTTTCAAGAAGTTGCTAAGGAAAGTATTCTGTCGATTCCCGGTGTATCTGATTTCGTGACTTATGGAGTGATTGGTGGAACTTTGGATGGTCAGAACAGCAAAGTTCTAGCTTCTAAAGATGGAATAAGGGAGCTGGGGCGGTTTTTGAGAGATAGTTTCAAATCTGCAGAGGCGGGAAATCTTTCTACAATTTCAAACTACGCTTCAATTGAGTCCGGCCCTAATCCGAGCATTACGGGCCAGGCCCAAACAGAGTATGCAATTGGGGTTTCGAAATCTAGCCCAAAACCTGGAAAAGAAATACCTGAGAAGAAGAGAAATGACTCAGGGGATCATCTCGACGTGGCTGTGAAGGAAAATCAACTCAATAGCTCAAGGGATTGGGAACCCTTGGACAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000184 GO:0000313 GO:0000462 GO:0000956 GO:0002164 GO:0002181 GO:0002182 GO:0002376 GO:0002520 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006401 GO:0006402 GO:0006412 GO:0006413 GO:0006414 GO:0006518 GO:0006605 GO:0006612 GO:0006613 GO:0006614 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009547 GO:0009570 GO:0009790 GO:0009791 GO:0009792 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0012505 GO:0015031 GO:0015833 GO:0015935 GO:0016043 GO:0016070 GO:0016071 GO:0016072 GO:0019222 GO:0019439 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022626 GO:0022627 GO:0030097 GO:0030490 GO:0030684 GO:0030686 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034470 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0034655 GO:0034660 GO:0035166 GO:0035167 GO:0042254 GO:0042255 GO:0042274 GO:0042886 GO:0043009 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043253 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045047 GO:0045184 GO:0046483 GO:0046700 GO:0046907 GO:0048513 GO:0048519 GO:0048534 GO:0048542 GO:0048569 GO:0048731 GO:0048732 GO:0048856 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051726 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070727 GO:0070925 GO:0070972 GO:0071702 GO:0071704 GO:0071705 GO:0071826 GO:0071840 GO:0072594 GO:0072599 GO:0072657 GO:0090150 GO:0090304 GO:1901360 GO:1901361 GO:1901564 GO:1901566 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03010 map03010
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N Ribosomal_S8e

Protein Analysis

454

Amino Acids

49.87

Weight (kDa)

7.6

Isoelectric Point (pI)

57.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 44
Acc36I ACCTGC 2 cut(s) 381, 780
AccB1I GGYRCC 1 cut(s) 441
AccB7I CCANNNNNTGG 1 cut(s) 1250
AccBSI CCGCTC 1 cut(s) 109
AccII CGCG 3 cut(s) 623, 625, 750
AccIII TCCGGA 1 cut(s) 528
AclWI GGATC 5 cut(s) 520, 533, 677, 770, 1299
AcoI YGGCCR 1 cut(s) 412
AcsI RAATTY 2 cut(s) 374, 461
AcuI CTGAAG 1 cut(s) 818
AcyI GRCGYC 2 cut(s) 39, 442
AfaI GTAC 3 cut(s) 266, 511, 580
AfeI AGCGCT 1 cut(s) 921
AfiI CCNNNNNNNGG 5 cut(s) 28, 228, 298, 692, 1250
AgsI TTSAA 4 cut(s) 965, 1120, 1155, 1167
AjiI CACGTC 2 cut(s) 96, 1303
AjnI CCWGG 5 cut(s) 188, 210, 226, 1200, 1249
AluBI AGCT 7 cut(s) 173, 184, 195, 720, 1070, 1093, 1332
AluI AGCT 7 cut(s) 173, 184, 195, 720, 1070, 1093, 1332
Alw21I GWGCWC 2 cut(s) 197, 732
AlwI GGATC 5 cut(s) 520, 533, 677, 770, 1299
Ama87I CYCGRG 2 cut(s) 99, 687
Aor13HI TCCGGA 1 cut(s) 528
Aor51HI AGCGCT 1 cut(s) 921
AoxI GGCC 7 cut(s) 139, 147, 300, 412, 1177, 1198, 1203
ApaI GGGCCC 1 cut(s) 143
ApeKI GCWGC 3 cut(s) 170, 181, 420
ApoI RAATTY 2 cut(s) 374, 461
AseI ATTAAT 1 cut(s) 908
Asp700I GAANNNNTTC 3 cut(s) 960, 984, 1141
AspLEI GCGC 5 cut(s) 444, 625, 627, 750, 922
AspS9I GGNCC 7 cut(s) 103, 139, 140, 148, 1178, 1198, 1204
AsuC2I CCSGG 6 cut(s) 100, 101, 688, 689, 780, 999
AsuHPI GGTGA 4 cut(s) 211, 692, 817, 892
AsuII TTCGAA 1 cut(s) 1232
AsuNHI GCTAGC 1 cut(s) 785
AvaI CYCGRG 2 cut(s) 99, 687
AvaII GGWCC 1 cut(s) 103
BaeGI GKGCMC 1 cut(s) 143
BaeI ACNNNNGTAYC 2 cut(s) 493, 526
BamHI GGATCC 1 cut(s) 525
BanI GGYRCC 1 cut(s) 441
BanII GRGCYC 2 cut(s) 143, 197
BauI CACGAG 1 cut(s) 304
BbsI GAAGAC 1 cut(s) 806
Bbv12I GWGCWC 2 cut(s) 197, 732
BbvI GCAGC 3 cut(s) 182, 193, 407
BccI CCATC 7 cut(s) 231, 277, 470, 557, 664, 1040, 1073
BceAI ACGGC 2 cut(s) 82, 99
BciT130I CCWGG 5 cut(s) 190, 212, 228, 1202, 1251
BcnI CCSGG 6 cut(s) 100, 101, 688, 689, 780, 999
BfaI CTAG 5 cut(s) 239, 659, 786, 1067, 1239
BfmI CTRYAG 1 cut(s) 1125
BfoI RGCGCY 2 cut(s) 445, 923
BfuAI ACCTGC 2 cut(s) 381, 780
BglII AGATCT 2 cut(s) 487, 655
BlpI GCTNAGC 1 cut(s) 287
BmcAI AGTACT 1 cut(s) 580
Bme18I GGWCC 1 cut(s) 103
BmeT110I CYCGRG 2 cut(s) 99, 687
BmgBI CACGTC 2 cut(s) 96, 1303
BmgT120I GGNCC 7 cut(s) 103, 139, 140, 148, 1178, 1198, 1204
BmiI GGNNCC 8 cut(s) 78, 104, 105, 141, 431, 443, 527, 1347
BmsI GCATC 1 cut(s) 251
BmtI GCTAGC 1 cut(s) 789
BpiI GAAGAC 1 cut(s) 806
Bpu10I CCTNAGC 3 cut(s) 174, 196, 975
Bpu1102I GCTNAGC 1 cut(s) 287
Bpu14I TTCGAA 1 cut(s) 1232
BpuEI CTTGAG 1 cut(s) 1318
BpuMI CCSGG 6 cut(s) 100, 101, 688, 689, 780, 999
BsaHI GRCGYC 2 cut(s) 39, 442
BsaJI CCNNGG 9 cut(s) 26, 99, 188, 210, 227, 258, 686, 687, 1350
BsaWI WCCGGW 1 cut(s) 528
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 228, 298, 692, 1250
Bse118I RCCGGY 5 cut(s) 145, 410, 423, 435, 547
Bse1I ACTGG 1 cut(s) 586
BseAI TCCGGA 1 cut(s) 528
BseBI CCWGG 5 cut(s) 190, 212, 228, 1202, 1251
BseDI CCNNGG 9 cut(s) 26, 99, 188, 210, 227, 258, 686, 687, 1350
BseGI GGATG 5 cut(s) 223, 269, 499, 568, 1051
BseLI CCNNNNNNNGG 5 cut(s) 28, 228, 298, 692, 1250
BseMII CTCAG 5 cut(s) 188, 210, 278, 1257, 1299
BseNI ACTGG 1 cut(s) 586
BsePI GCGCGC 1 cut(s) 623
BseRI GAGGAG 1 cut(s) 362
BseSI GKGCMC 1 cut(s) 143
BseX3I CGGCCG 1 cut(s) 412
BseXI GCAGC 3 cut(s) 182, 193, 407
BseYI CCCAGC 1 cut(s) 1093
Bsh1236I CGCG 3 cut(s) 623, 625, 750
Bsh1285I CGRYCG 1 cut(s) 415
BshFI GGCC 7 cut(s) 141, 149, 302, 414, 1179, 1200, 1205
BshNI GGYRCC 1 cut(s) 441
BsiEI CGRYCG 1 cut(s) 415
BsiHKAI GWGCWC 2 cut(s) 197, 732
BsiHKCI CYCGRG 2 cut(s) 99, 687
BslFI GGGAC 2 cut(s) 82, 116
BslI CCNNNNNNNGG 5 cut(s) 28, 228, 298, 692, 1250
BsmFI GGGAC 2 cut(s) 82, 116
BsnI GGCC 7 cut(s) 141, 149, 302, 414, 1179, 1200, 1205
BsoBI CYCGRG 2 cut(s) 99, 687
Bsp119I TTCGAA 1 cut(s) 1232
Bsp120I GGGCCC 1 cut(s) 139
Bsp1286I GDGCHC 3 cut(s) 143, 197, 732
Bsp13I TCCGGA 1 cut(s) 528
Bsp143I GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
Bsp1720I GCTNAGC 1 cut(s) 287
BspANI GGCC 7 cut(s) 141, 149, 302, 414, 1179, 1200, 1205
BspCNI CTCAG 5 cut(s) 187, 209, 279, 1258, 1298
BspEI TCCGGA 1 cut(s) 528
BspFNI CGCG 3 cut(s) 623, 625, 750
BspHI TCATGA 1 cut(s) 333
BspLI GGNNCC 8 cut(s) 78, 104, 105, 141, 431, 443, 527, 1347
BspMAI CTGCAG 1 cut(s) 1129
BspMI ACCTGC 2 cut(s) 381, 780
BspOI GCTAGC 1 cut(s) 789
BspPI GGATC 5 cut(s) 520, 533, 677, 770, 1299
BspT104I TTCGAA 1 cut(s) 1232
BspT107I GGYRCC 1 cut(s) 441
BsrBI CCGCTC 1 cut(s) 109
BsrFI RCCGGY 5 cut(s) 145, 410, 423, 435, 547
BsrI ACTGG 1 cut(s) 586
BssAI RCCGGY 5 cut(s) 145, 410, 423, 435, 547
BssECI CCNNGG 9 cut(s) 26, 99, 188, 210, 227, 258, 686, 687, 1350
BssHII GCGCGC 1 cut(s) 623
BssMI GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
BssNI GRCGYC 2 cut(s) 39, 442
BssSI CACGAG 1 cut(s) 304
BssT1I CCWWGG 2 cut(s) 26, 1350
Bst2BI CACGAG 1 cut(s) 304
Bst2UI CCWGG 5 cut(s) 190, 212, 228, 1202, 1251
Bst4CI ACNGT 3 cut(s) 157, 805, 1358
Bst6I CTCTTC 1 cut(s) 1268
BstACI GRCGYC 2 cut(s) 39, 442
BstBI TTCGAA 1 cut(s) 1232
BstC8I GCNNGC 8 cut(s) 412, 425, 437, 549, 600, 625, 787, 825
BstDEI CTNAG 7 cut(s) 174, 196, 287, 310, 975, 1266, 1285
BstEII GGTNACC 1 cut(s) 217
BstF5I GGATG 5 cut(s) 223, 269, 499, 568, 1051
BstFNI CGCG 3 cut(s) 623, 625, 750
BstH2I RGCGCY 2 cut(s) 445, 923
BstHHI GCGC 5 cut(s) 444, 625, 627, 750, 922
BstKTI GATC 7 cut(s) 490, 501, 528, 658, 685, 778, 1294
BstMBI GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
BstMCI CGRYCG 1 cut(s) 415
BstMWI GCNNNNNNNGC 6 cut(s) 420, 429, 441, 633, 928, 1197
BstNI CCWGG 5 cut(s) 190, 212, 228, 1202, 1251
BstNSI RCATGY 2 cut(s) 252, 827
BstPI GGTNACC 1 cut(s) 217
BstSFI CTRYAG 1 cut(s) 1125
BstSLI GKGCMC 1 cut(s) 143
BstUI CGCG 3 cut(s) 623, 625, 750
BstV1I GCAGC 3 cut(s) 182, 193, 407
BstV2I GAAGAC 1 cut(s) 806
BstX2I RGATCY 4 cut(s) 487, 525, 655, 775
BstYI RGATCY 4 cut(s) 487, 525, 655, 775
BstZI CGGCCG 1 cut(s) 412
BsuRI GGCC 7 cut(s) 141, 149, 302, 414, 1179, 1200, 1205
BtrI CACGTC 2 cut(s) 96, 1303
BtsCI GGATG 5 cut(s) 223, 269, 499, 568, 1051
BtsI GCAGTG 1 cut(s) 576
BtsIMutI CAGTG 2 cut(s) 576, 794
BveI ACCTGC 2 cut(s) 381, 780
Cac8I GCNNGC 8 cut(s) 412, 425, 437, 549, 600, 625, 787, 825
CciI TCATGA 1 cut(s) 333
CfoI GCGC 5 cut(s) 444, 625, 627, 750, 922
Cfr10I RCCGGY 5 cut(s) 145, 410, 423, 435, 547
Cfr13I GGNCC 7 cut(s) 103, 139, 140, 148, 1178, 1198, 1204
Cfr9I CCCGGG 2 cut(s) 99, 687
CseI GACGC 1 cut(s) 47
Csp6I GTAC 3 cut(s) 265, 510, 579
CspCI CAANNNNNGTGG 2 cut(s) 8, 43
CviAII CATG 5 cut(s) 249, 334, 592, 706, 824
CviQI GTAC 3 cut(s) 265, 510, 579
DdeI CTNAG 7 cut(s) 174, 196, 287, 310, 975, 1266, 1285
DinI GGCGCC 1 cut(s) 443
DpnI GATC 7 cut(s) 489, 500, 527, 657, 684, 777, 1293
DpnII GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
DrdI GACNNNNNNGTC 1 cut(s) 44
DseDI GACNNNNNNGTC 1 cut(s) 44
EaeI YGGCCR 1 cut(s) 412
EagI CGGCCG 1 cut(s) 412
Eam1104I CTCTTC 1 cut(s) 1268
EarI CTCTTC 1 cut(s) 1268
EciI GGCGGA 3 cut(s) 101, 442, 778
Ecl136II GAGCTC 1 cut(s) 195
EclXI CGGCCG 1 cut(s) 412
Eco130I CCWWGG 2 cut(s) 26, 1350
Eco147I AGGCCT 1 cut(s) 302
Eco24I GRGCYC 2 cut(s) 143, 197
Eco47I GGWCC 1 cut(s) 103
Eco47III AGCGCT 1 cut(s) 921
Eco52I CGGCCG 1 cut(s) 412
Eco53kI GAGCTC 1 cut(s) 195
Eco57I CTGAAG 1 cut(s) 818
Eco88I CYCGRG 2 cut(s) 99, 687
Eco91I GGTNACC 1 cut(s) 217
EcoICRI GAGCTC 1 cut(s) 195
EcoO109I RGGNCCY 1 cut(s) 103
EcoO65I GGTNACC 1 cut(s) 217
EcoRII CCWGG 5 cut(s) 188, 210, 226, 1200, 1249
EcoT14I CCWWGG 2 cut(s) 26, 1350
EcoT38I GRGCYC 2 cut(s) 143, 197
EgeI GGCGCC 1 cut(s) 443
EheI GGCGCC 1 cut(s) 443
ErhI CCWWGG 2 cut(s) 26, 1350
FaeI CATG 5 cut(s) 252, 337, 595, 709, 827
FaiI YATR 9 cut(s) 250, 335, 468, 593, 707, 746, 825, 1023, 1218
FaqI GGGAC 2 cut(s) 82, 116
FatI CATG 5 cut(s) 248, 333, 591, 705, 823
FauI CCCGC 3 cut(s) 114, 870, 1126
FokI GGATG 5 cut(s) 210, 256, 506, 575, 1058
FriOI GRGCYC 2 cut(s) 143, 197
FspBI CTAG 5 cut(s) 239, 659, 786, 1067, 1239
GlaI GCGC 5 cut(s) 443, 624, 626, 749, 921
GsaI CCCAGC 1 cut(s) 1097
HaeII RGCGCY 2 cut(s) 445, 923
HaeIII GGCC 7 cut(s) 141, 149, 302, 414, 1179, 1200, 1205
HgaI GACGC 1 cut(s) 47
HhaI GCGC 5 cut(s) 444, 625, 627, 750, 922
Hin1I GRCGYC 2 cut(s) 39, 442
Hin1II CATG 5 cut(s) 252, 337, 595, 709, 827
Hin6I GCGC 5 cut(s) 442, 623, 625, 748, 920
HinP1I GCGC 5 cut(s) 442, 623, 625, 748, 920
HinfI GANTC 6 cut(s) 32, 364, 830, 994, 1172, 1283
HphI GGTGA 4 cut(s) 211, 692, 817, 892
Hpy166II GTNNAC 2 cut(s) 542, 619
Hpy8I GTNNAC 2 cut(s) 542, 619
Hpy99I CGWCG 3 cut(s) 41, 50, 1304
HpyAV CCTTC 4 cut(s) 686, 802, 893, 1306
HpyCH4III ACNGT 3 cut(s) 157, 805, 1358
HpyCH4IV ACGT 3 cut(s) 95, 586, 1302
HpyCH4V TGCA 7 cut(s) 390, 591, 636, 827, 839, 1127, 1220
HpyF10VI GCNNNNNNNGC 6 cut(s) 420, 429, 441, 633, 928, 1197
HpyF3I CTNAG 7 cut(s) 174, 196, 287, 310, 975, 1266, 1285
HpySE526I ACGT 3 cut(s) 95, 586, 1302
Hsp92I GRCGYC 2 cut(s) 39, 442
Hsp92II CATG 5 cut(s) 252, 337, 595, 709, 827
HspAI GCGC 5 cut(s) 442, 623, 625, 748, 920
KasI GGCGCC 1 cut(s) 441
KflI GGGWCCC 1 cut(s) 103
Kpn2I TCCGGA 1 cut(s) 528
KroI GCCGGC 4 cut(s) 410, 423, 435, 547
KroNI GCCGGC 4 cut(s) 412, 425, 437, 549
Kzo9I GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
LmnI GCTCC 8 cut(s) 82, 114, 178, 192, 200, 429, 727, 1090
Lsp1109I GCAGC 3 cut(s) 182, 193, 407
LweI GCATC 1 cut(s) 251
MaeI CTAG 5 cut(s) 239, 659, 786, 1067, 1239
MaeII ACGT 3 cut(s) 95, 586, 1302
MaeIII GTNAC 6 cut(s) 91, 116, 217, 469, 792, 1015
MalI GATC 7 cut(s) 489, 500, 527, 657, 684, 777, 1293
MbiI CCGCTC 1 cut(s) 109
MboI GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
MboII GAAGA 5 cut(s) 373, 497, 811, 1282, 1285
MfeI CAATTG 4 cut(s) 603, 641, 1167, 1221
MflI RGATCY 4 cut(s) 487, 525, 655, 775
MhlI GDGCHC 3 cut(s) 143, 197, 732
Mly113I GGCGCC 1 cut(s) 442
MlyI GAGTC 3 cut(s) 41, 1181, 1277
MmeI TCCRAC 1 cut(s) 60
MreI CGCCGGCG 2 cut(s) 435, 547
MroI TCCGGA 1 cut(s) 528
MroNI GCCGGC 4 cut(s) 410, 423, 435, 547
MroXI GAANNNNTTC 3 cut(s) 960, 984, 1141
MseI TTAA 4 cut(s) 254, 371, 846, 908
MslI CAYNNNNRTG 1 cut(s) 247
MspA1I CMGCKG 3 cut(s) 286, 420, 450
MunI CAATTG 4 cut(s) 603, 641, 1167, 1221
MvaI CCWGG 5 cut(s) 190, 212, 228, 1202, 1251
MvnI CGCG 3 cut(s) 623, 625, 750
MwoI GCNNNNNNNGC 6 cut(s) 420, 429, 441, 633, 928, 1197
NaeI GCCGGC 4 cut(s) 412, 425, 437, 549
NarI GGCGCC 1 cut(s) 442
NciI CCSGG 6 cut(s) 100, 101, 688, 689, 780, 999
NdeII GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
NgoMIV GCCGGC 4 cut(s) 410, 423, 435, 547
NheI GCTAGC 1 cut(s) 785
NlaIII CATG 5 cut(s) 252, 337, 595, 709, 827
NlaIV GGNNCC 8 cut(s) 78, 104, 105, 141, 431, 443, 527, 1347
NmuCI GTSAC 4 cut(s) 91, 217, 792, 1015
NspI RCATGY 2 cut(s) 252, 827
NspV TTCGAA 1 cut(s) 1232
PaeI GCATGC 1 cut(s) 827
PagI TCATGA 1 cut(s) 333
PauI GCGCGC 1 cut(s) 623
PceI AGGCCT 1 cut(s) 302
PdiI GCCGGC 4 cut(s) 412, 425, 437, 549
PdmI GAANNNNTTC 3 cut(s) 960, 984, 1141
PfeI GAWTC 3 cut(s) 364, 830, 994
PflMI CCANNNNNTGG 1 cut(s) 1250
PleI GAGTC 3 cut(s) 40, 1180, 1277
PluTI GGCGCC 1 cut(s) 445
PpsI GAGTC 3 cut(s) 40, 1180, 1277
PpuMI RGGWCCY 1 cut(s) 103
PshBI ATTAAT 1 cut(s) 908
Psp124BI GAGCTC 1 cut(s) 197
Psp5II RGGWCCY 1 cut(s) 103
Psp6I CCWGG 5 cut(s) 188, 210, 226, 1200, 1249
PspEI GGTNACC 1 cut(s) 217
PspFI CCCAGC 1 cut(s) 1093
PspGI CCWGG 5 cut(s) 188, 210, 226, 1200, 1249
PspN4I GGNNCC 8 cut(s) 78, 104, 105, 141, 431, 443, 527, 1347
PspOMI GGGCCC 1 cut(s) 139
PspPI GGNCC 7 cut(s) 103, 139, 140, 148, 1178, 1198, 1204
PspPPI RGGWCCY 1 cut(s) 103
PstI CTGCAG 1 cut(s) 1129
PsuI RGATCY 4 cut(s) 487, 525, 655, 775
PteI GCGCGC 1 cut(s) 623
RsaI GTAC 3 cut(s) 266, 511, 580
RsaNI GTAC 3 cut(s) 265, 510, 579
RseI CAYNNNNRTG 1 cut(s) 247
SacI GAGCTC 1 cut(s) 197
SaqAI TTAA 4 cut(s) 254, 371, 846, 908
Sau3AI GATC 7 cut(s) 487, 498, 525, 655, 682, 775, 1291
Sau96I GGNCC 7 cut(s) 103, 139, 140, 148, 1178, 1198, 1204
ScaI AGTACT 1 cut(s) 580
SchI GAGTC 3 cut(s) 41, 1181, 1277
SduI GDGCHC 3 cut(s) 143, 197, 732
SfaNI GCATC 1 cut(s) 251
SfcI CTRYAG 1 cut(s) 1125
SfoI GGCGCC 1 cut(s) 443
SfuI TTCGAA 1 cut(s) 1232
SgrAI CRCCGGYG 2 cut(s) 435, 547
SinI GGWCC 1 cut(s) 103
SmaI CCCGGG 2 cut(s) 101, 689
SmiMI CAYNNNNRTG 1 cut(s) 247
SmlI CTYRAG 1 cut(s) 1333
SmoI CTYRAG 1 cut(s) 1333
SphI GCATGC 1 cut(s) 827
SseBI AGGCCT 1 cut(s) 302
SspDI GGCGCC 1 cut(s) 441
SspI AATATT 1 cut(s) 518
SspMI CTAG 5 cut(s) 239, 659, 786, 1067, 1239
SstI GAGCTC 1 cut(s) 197
StuI AGGCCT 1 cut(s) 302
StyI CCWWGG 2 cut(s) 26, 1350
TaaI ACNGT 3 cut(s) 157, 805, 1358
TaiI ACGT 3 cut(s) 98, 589, 1305
TaqI TCGA 4 cut(s) 501, 992, 1232, 1299
TatI WGTACW 1 cut(s) 578
TauI GCSGC 8 cut(s) 286, 417, 420, 435, 442, 447, 450, 753
TfiI GAWTC 3 cut(s) 364, 830, 994
Tru1I TTAA 4 cut(s) 254, 371, 846, 908
Tru9I TTAA 4 cut(s) 254, 371, 846, 908
TscAI CASTG 2 cut(s) 576, 801
TseFI GTSAC 4 cut(s) 91, 217, 792, 1015
TseI GCWGC 3 cut(s) 170, 181, 420
Tsp45I GTSAC 4 cut(s) 91, 217, 792, 1015
TspDTI ATGAA 1 cut(s) 350
TspGWI ACGGA 1 cut(s) 497
TspMI CCCGGG 2 cut(s) 99, 687
TspRI CASTG 2 cut(s) 576, 801
Van91I CCANNNNNTGG 1 cut(s) 1250
VpaK11BI GGWCC 1 cut(s) 103
VspI ATTAAT 1 cut(s) 908
XapI RAATTY 2 cut(s) 374, 461
XceI RCATGY 2 cut(s) 252, 827
XmaI CCCGGG 2 cut(s) 99, 687
XmnI GAANNNNTTC 3 cut(s) 960, 984, 1141
XspI CTAG 5 cut(s) 239, 659, 786, 1067, 1239
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.