Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005580.1

Orthogroup ID

OG0000607

Physical Location & Seq

Genomic Coordinates Forward (+)

71116 .. 75572

Gene Structure 4457 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005580.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

atgggatttactgagaaggacctatacaacaagcttgaccaacaacggcgcaccacttcctttgagagtgactccgaaggcgcacttgcctacatgaacgctctggcagcacaagacccatacttctactgcaggttcaatgtagatatagaagacaggttagcaaacatgttttggcgagatgggcatgcatttgttgattttatgtgttacggggatgtgctgatctttgataacacatacaaaaccaatgtttacaaaaagccattggttttgtttgttgggtcaaacaatcatcggggaattattttgtttggtgctgctcttcttgttgatgaaacggtggagacatacacttggctgttgcgttcgtttttggatgcaatgaatgggaagatgccaatagctgtactcacagatggagatgaggccatgcgtagcgcaattgaagacgtgatgccacaagcaaagcaccgtctttgtgcttggcacctttccagaaatgccaacactaatttgaagtgcgacgaaaagttgaaagcttctaacaggtacatgagaaaattccaaactgtggagcagttcgaagtaatatggcacgacatggtggagaaattcgatctccacaacagtttctggatcaacatgatgtatgagaaacgagacaagtgggctcaagcatttttcaggaaccattttatggctggcatgagaagcacgcagaggtgtgagggcatgaataggttcatcaaagactctattgggagcggtatgaaactagtcgaagtcgttccgaggatggaccgagcattcatgagattgagaaacaatcaagtaagggatgactttaacactatgaactcaacccctattctcgaaactcacctaaaagacttggagaatcatgagcttctatatacacatacgatgtgtttaagtgggttaggaaggagatcaggaaggagagccaagccacactacgacagggaccagagtactttgaagataggcaccgtgtttacacaaggtcagcttacaagcggcctgattttgagcacaaggggagtctcatgtcgtcacatgttcacagtgatgaaacacgaacacatcaatgagattccaaagtcactgattgtgaagatatggtcgaagtctgctagagatgtgtgttcaatcaaatatccggaacaagatatttccaaagaagccctggaagttaatcctatcaccgctaagaccaaaggcagagaagccaaaagcgacaaagagtatgagccatccaaacgaccgattacttgtagttattacaaaggtcctggccacaatactcagacatgtgaagataggaaggagaaagaagctgagaagagaggcggcaaagaagctgaaaagacaggcggcgaaggaagcaacactccttggaatgcaacagctgcgaaaagatccattcattgtagtagatgcaaagtgctcgatgggaatgcccagaaacataaaaaatggttgtgtaagaagtctggaggaaggctagaaagtgttcattttagtttaaggtcaaagtattattggtcctttcactgtggtgtgcaagatgtcttcactgggatcagaagaagcctagtctcgatattgcaggtagccttatggtccccgcattggatgaaaagcataagcatatctctgataaatatgagaaagaagacgactcaaagccaatacatgcgcacacatgttctgttgttgaagaaggattttgcatccatatcgccgatgtcactaagagaccatgcggcacatgcgcacacctgtacaatgtcggtccagacaacaaaaagagatgcagttgtatcttatgccactaggaagaggaacaagatgggaatgcccattcacctccctcaggttattggtggtgacctagagactctgaattctctccagatattgatgattttcaccaagcaagtgttctgtggatgtgactgtagtctccttagattgtttgtgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

669

Amino Acids

77.1

Weight (kDa)

9.38

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000607)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g29041 FvH4_2g05300 FvH4_2g08491 FvH4_2g12592 FvH4_2g16601 FvH4_3g17521 FvH4_3g17741 FvH4_3g23821 FvH4_3g26292 FvH4_3g26554 FvH4_3g31811 FvH4_3g31840 FvH4_3g31881 FvH4_3g43760 FvH4_3g46000 FvH4_4g00252 FvH4_4g00253 FvH4_4g08102 FvH4_4g08643 FvH4_4g08976 FvH4_4g10123 FvH4_4g10211 FvH4_4g15670 FvH4_4g16722 FvH4_4g22041 FvH4_4g26211 FvH4_4g28751 FvH4_4g33572 FvH4_5g14271 FvH4_5g16041 FvH4_5g18831 FvH4_5g21091 FvH4_5g24054 FvH4_5g25100 FvH4_5g25922 FvH4_5g28641 FvH4_5g30671 FvH4_5g37992 FvH4_6g12050 FvH4_6g19900 FvH4_6g20111 FvH4_6g27110 FvH4_6g30731 FvH4_7g03533 FvH4_7g03535 FvH4_7g04902
prunus_persica	Prupe.7G011500_v2.0.a1
pyrus_communis	pycom13g23420
rosa_laevigata	RLG00000001881 RLG00000009213 RLG00000013649 RLG00000019918 RLG00000022552 RLG00000023369
rosa_multiflora	Rmu_co8122264.1_g000001 Rmu_sc0000308.1_g000015 Rmu_sc0001498.1_g000012 Rmu_sc0002268.1_g000018 Rmu_sc0003433.1_g000009 Rmu_sc0003776.1_g000024 Rmu_sc0004702.1_g000009 Rmu_sc0005399.1_g000009 Rmu_sc0005578.1_g000002 Rmu_sc0005580.1_g000010 Rmu_sc0012425.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226140 Rroxscaffold_3G00229900 Rroxscaffold_3G00229910 Rroxscaffold_4G00317870 Rroxscaffold_6G00401500
rosa_rugosa	Rorug07G0258900
rosa_samantha	Rh1DG057600 Rh6AG088300 Rh7DG367800 Rh7DG408700
rosa_wichuraiana	Rw1G008000 Rw6G012040 Rw7G021280 Rw7G034100 Rw7G040490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1724, 1800
Acc36I	ACCTGC	2 cut(s)	123, 1624
AccB1I	GGYRCC	2 cut(s)	489, 1010
AccB7I	CCANNNNNTGG	2 cut(s)	574, 700
AccBSI	CCGCTC	1 cut(s)	768
AccIII	TCCGGA	1 cut(s)	1183
AciI	CCGC	7 cut(s)	768, 1041, 1230, 1374, 1398, 1652, 1790
AclWI	GGATC	3 cut(s)	647, 1437, 1613
AcoI	YGGCCR	1 cut(s)	1318
AcsI	RAATTY	3 cut(s)	563, 614, 1930
AfaI	GTAC	4 cut(s)	411, 554, 997, 1810
AfiI	CCNNNNNNNGG	4 cut(s)	574, 700, 1656, 1900
AflIII	ACRYGT	4 cut(s)	168, 1080, 1334, 1729
AgsI	TTSAA	7 cut(s)	139, 449, 520, 538, 1003, 1173, 1744
AhlI	ACTAGT	1 cut(s)	778
AjiI	CACGTC	1 cut(s)	454
AjnI	CCWGG	2 cut(s)	1209, 1315
AjuI	GAANNNNNNNTTGG	2 cut(s)	1952, 1984
AleI	CACNNNNGTG	1 cut(s)	1581
AluBI	AGCT	8 cut(s)	34, 407, 542, 910, 1033, 1361, 1385, 1433
AluI	AGCT	8 cut(s)	34, 407, 542, 910, 1033, 1361, 1385, 1433
Alw21I	GWGCWC	2 cut(s)	1058, 1473
Alw26I	GTCTC	7 cut(s)	341, 657, 1072, 1627, 1776, 1916, 1994
AlwI	GGATC	3 cut(s)	647, 1437, 1613
AlwNI	CAGNNNCTG	1 cut(s)	636
Aor13HI	TCCGGA	1 cut(s)	1183
AoxI	GGCC	3 cut(s)	429, 1042, 1318
ApeKI	GCWGC	3 cut(s)	107, 320, 1433
ApoI	RAATTY	3 cut(s)	563, 614, 1930
Asp700I	GAANNNNTTC	3 cut(s)	743, 789, 1536
AspLEI	GCGC	5 cut(s)	51, 83, 443, 1725, 1801
AspS9I	GGNCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
AsuHPI	GGTGA	5 cut(s)	875, 1219, 1883, 1925, 1948
AsuII	TTCGAA	1 cut(s)	585
AvaII	GGWCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
AxyI	CCTNAGG	1 cut(s)	1899
BalI	TGGCCA	1 cut(s)	1320
BanI	GGYRCC	2 cut(s)	489, 1010
BanII	GRGCYC	1 cut(s)	676
BarI	GAAGNNNNNNTAC	2 cut(s)	8, 40
BbsI	GAAGAC	4 cut(s)	159, 456, 1588, 1706
Bbv12I	GWGCWC	2 cut(s)	1058, 1473
BbvI	GCAGC	3 cut(s)	119, 307, 1420
BccI	CCATC	6 cut(s)	176, 413, 793, 1285, 1469, 1870
BceAI	ACGGC	1 cut(s)	62
BcgI	CGANNNNNNTGC	6 cut(s)	1453, 1463, 1487, 1497, 1746, 1780
BciT130I	CCWGG	2 cut(s)	1211, 1317
BcoDI	GTCTC	7 cut(s)	341, 657, 1072, 1627, 1776, 1916, 1994
BcuI	ACTAGT	1 cut(s)	778
BfaI	CTAG	6 cut(s)	779, 1158, 1529, 1619, 1860, 1919
BfmI	CTRYAG	2 cut(s)	130, 1984
BfuAI	ACCTGC	2 cut(s)	123, 1624
BisI	GCNGC	7 cut(s)	108, 321, 1042, 1375, 1399, 1434, 1791
BlsI	GCNGC	7 cut(s)	109, 322, 1043, 1376, 1400, 1435, 1792
BmcAI	AGTACT	1 cut(s)	997
Bme1390I	CCNGG	2 cut(s)	1211, 1317
Bme18I	GGWCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
BmgBI	CACGTC	1 cut(s)	454
BmgT120I	GGNCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
BmiI	GGNNCC	5 cut(s)	491, 692, 989, 1012, 1649
BmrFI	CCNGG	2 cut(s)	1211, 1317
BmrI	ACTGGG	1 cut(s)	1611
BmsI	GCATC	6 cut(s)	370, 387, 447, 1451, 1766, 1828
BmuI	ACTGGG	1 cut(s)	1611
BoxI	GACNNNNGTC	1 cut(s)	1986
BpiI	GAAGAC	4 cut(s)	159, 456, 1588, 1706
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	2 cut(s)	1539, 1922
Bpu14I	TTCGAA	1 cut(s)	585
BpuEI	CTTGAG	1 cut(s)	660
BsaI	GGTCTC	1 cut(s)	1776
BsaJI	CCNNGG	3 cut(s)	794, 1209, 1418
BsaWI	WCCGGW	1 cut(s)	1183
Bsc4I	CCNNNNNNNGG	4 cut(s)	574, 700, 1656, 1900
Bse1I	ACTGG	1 cut(s)	1606
Bse21I	CCTNAGG	1 cut(s)	1899
Bse3DI	GCAATG	1 cut(s)	390
BseAI	TCCGGA	1 cut(s)	1183
BseBI	CCWGG	2 cut(s)	1211, 1317
BseDI	CCNNGG	3 cut(s)	794, 1209, 1418
BseGI	GGATG	8 cut(s)	223, 385, 804, 847, 1277, 1665, 1757, 1982
BseLI	CCNNNNNNNGG	4 cut(s)	574, 700, 1656, 1900
BseMI	GCAATG	1 cut(s)	390
BseMII	CTCAG	3 cut(s)	1343, 1353, 1913
BseNI	ACTGG	1 cut(s)	1606
BseXI	GCAGC	3 cut(s)	119, 307, 1420
Bsh1285I	CGRYCG	1 cut(s)	1289
BshFI	GGCC	3 cut(s)	431, 1044, 1320
BshNI	GGYRCC	2 cut(s)	489, 1010
BsiEI	CGRYCG	1 cut(s)	1289
BsiHKAI	GWGCWC	2 cut(s)	1058, 1473
BsiSI	CCGG	1 cut(s)	1184
BslFI	GGGAC	2 cut(s)	1001, 1633
BslI	CCNNNNNNNGG	4 cut(s)	574, 700, 1656, 1900
BsmAI	GTCTC	7 cut(s)	341, 657, 1072, 1627, 1776, 1916, 1994
BsmFI	GGGAC	2 cut(s)	1001, 1633
BsmI	GAATGC	4 cut(s)	809, 1429, 1486, 1887
BsnI	GGCC	3 cut(s)	431, 1044, 1320
Bso31I	GGTCTC	1 cut(s)	1776
Bsp119I	TTCGAA	1 cut(s)	585
Bsp1286I	GDGCHC	3 cut(s)	676, 1058, 1473
Bsp13I	TCCGGA	1 cut(s)	1183
Bsp1407I	TGTACA	1 cut(s)	1808
Bsp143I	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
BspACI	CCGC	7 cut(s)	768, 1041, 1230, 1374, 1398, 1652, 1790
BspANI	GGCC	3 cut(s)	431, 1044, 1320
BspCNI	CTCAG	4 cut(s)	4, 1342, 1354, 1912
BspEI	TCCGGA	1 cut(s)	1183
BspHI	TCATGA	2 cut(s)	813, 904
BspLI	GGNNCC	5 cut(s)	491, 692, 989, 1012, 1649
BspMAI	CTGCAG	1 cut(s)	134
BspMI	ACCTGC	2 cut(s)	123, 1624
BspPI	GGATC	3 cut(s)	647, 1437, 1613
BspQI	GCTCTTC	1 cut(s)	330
BspT104I	TTCGAA	1 cut(s)	585
BspT107I	GGYRCC	2 cut(s)	489, 1010
BspTNI	GGTCTC	1 cut(s)	1776
BsrBI	CCGCTC	1 cut(s)	768
BsrDI	GCAATG	1 cut(s)	390
BsrGI	TGTACA	1 cut(s)	1808
BsrI	ACTGG	1 cut(s)	1606
BssECI	CCNNGG	3 cut(s)	794, 1209, 1418
BssMI	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
BssT1I	CCWWGG	1 cut(s)	1418
Bst2UI	CCWGG	2 cut(s)	1211, 1317
Bst4CI	ACNGT	8 cut(s)	343, 476, 574, 632, 1015, 1090, 1580, 1985
Bst6I	CTCTTC	3 cut(s)	330, 1361, 1859
BstAPI	GCANNNNNTGC	1 cut(s)	1433
BstAUI	TGTACA	1 cut(s)	1808
BstBI	TTCGAA	1 cut(s)	585
BstC8I	GCNNGC	3 cut(s)	189, 706, 719
BstDEI	CTNAG	7 cut(s)	12, 1233, 1329, 1362, 1778, 1899, 1994
BstEII	GGTNACC	1 cut(s)	1913
BstENI	CCTNNNNNAGG	1 cut(s)	1898
BstF5I	GGATG	8 cut(s)	223, 385, 804, 847, 1277, 1665, 1757, 1982
BstHHI	GCGC	5 cut(s)	51, 83, 443, 1725, 1801
BstKTI	GATC	6 cut(s)	228, 622, 642, 956, 1445, 1608
BstMAI	GTCTC	7 cut(s)	341, 657, 1072, 1627, 1776, 1916, 1994
BstMBI	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
BstMCI	CGRYCG	1 cut(s)	1289
BstMWI	GCNNNNNNNGC	6 cut(s)	107, 184, 714, 1407, 1433, 1796
BstNI	CCWGG	2 cut(s)	1211, 1317
BstNSI	RCATGY	7 cut(s)	172, 191, 1084, 1338, 1723, 1733, 1799
BstPAI	GACNNNNGTC	1 cut(s)	1986
BstPI	GGTNACC	1 cut(s)	1913
BstSCI	CCNGG	2 cut(s)	1209, 1315
BstSFI	CTRYAG	2 cut(s)	130, 1984
BstV1I	GCAGC	3 cut(s)	119, 307, 1420
BstV2I	GAAGAC	4 cut(s)	159, 456, 1588, 1706
BstX2I	RGATCY	1 cut(s)	1442
BstYI	RGATCY	1 cut(s)	1442
Bsu36I	CCTNAGG	1 cut(s)	1899
BsuRI	GGCC	3 cut(s)	431, 1044, 1320
BtrI	CACGTC	1 cut(s)	454
BtsCI	GGATG	8 cut(s)	223, 385, 804, 847, 1277, 1665, 1757, 1982
BtsIMutI	CAGTG	4 cut(s)	1095, 1127, 1576, 1599
BveI	ACCTGC	2 cut(s)	123, 1624
Cac8I	GCNNGC	3 cut(s)	189, 706, 719
CaiI	CAGNNNCTG	1 cut(s)	636
CciI	TCATGA	2 cut(s)	813, 904
CfoI	GCGC	5 cut(s)	51, 83, 443, 1725, 1801
Cfr13I	GGNCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
Csp6I	GTAC	4 cut(s)	410, 553, 996, 1809
CspCI	CAANNNNNGTGG	2 cut(s)	43, 78
CviQI	GTAC	4 cut(s)	410, 553, 996, 1809
DdeI	CTNAG	7 cut(s)	12, 1233, 1329, 1362, 1778, 1899, 1994
DpnI	GATC	6 cut(s)	227, 621, 641, 955, 1444, 1607
DpnII	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
EaeI	YGGCCR	1 cut(s)	1318
Eam1104I	CTCTTC	3 cut(s)	330, 1361, 1859
EarI	CTCTTC	3 cut(s)	330, 1361, 1859
Eco130I	CCWWGG	1 cut(s)	1418
Eco24I	GRGCYC	1 cut(s)	676
Eco31I	GGTCTC	1 cut(s)	1776
Eco47I	GGWCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
Eco81I	CCTNAGG	1 cut(s)	1899
Eco91I	GGTNACC	1 cut(s)	1913
EcoNI	CCTNNNNNAGG	1 cut(s)	1898
EcoO109I	RGGNCCY	2 cut(s)	19, 1313
EcoO65I	GGTNACC	1 cut(s)	1913
EcoRI	GAATTC	1 cut(s)	1930
EcoRII	CCWGG	2 cut(s)	1209, 1315
EcoT14I	CCWWGG	1 cut(s)	1418
EcoT22I	ATGCAT	1 cut(s)	193
EcoT38I	GRGCYC	1 cut(s)	676
ErhI	CCWWGG	1 cut(s)	1418
FalI	AAGNNNNNCTT	4 cut(s)	69, 101, 1017, 1049
FaqI	GGGAC	2 cut(s)	1001, 1633
FauI	CCCGC	1 cut(s)	1659
Fnu4HI	GCNGC	7 cut(s)	108, 321, 1042, 1375, 1399, 1434, 1791
FokI	GGATG	8 cut(s)	230, 392, 811, 854, 1264, 1672, 1744, 1989
FriOI	GRGCYC	1 cut(s)	676
Fsp4HI	GCNGC	7 cut(s)	108, 321, 1042, 1375, 1399, 1434, 1791
FspAI	RTGCGCAY	2 cut(s)	1724, 1800
FspBI	CTAG	6 cut(s)	779, 1158, 1529, 1619, 1860, 1919
FspI	TGCGCA	2 cut(s)	1724, 1800
GlaI	GCGC	5 cut(s)	50, 82, 442, 1724, 1800
GluI	GCNGC	7 cut(s)	108, 321, 1042, 1375, 1399, 1434, 1791
GsuI	CTGGAG	2 cut(s)	1539, 1922
HaeIII	GGCC	3 cut(s)	431, 1044, 1320
HapII	CCGG	1 cut(s)	1184
HhaI	GCGC	5 cut(s)	51, 83, 443, 1725, 1801
Hin6I	GCGC	5 cut(s)	49, 81, 441, 1723, 1799
HinP1I	GCGC	5 cut(s)	49, 81, 441, 1723, 1799
HindIII	AAGCTT	2 cut(s)	32, 540
HinfI	GANTC	7 cut(s)	71, 755, 901, 1065, 1117, 1705, 1924
HpaII	CCGG	1 cut(s)	1184
HphI	GGTGA	5 cut(s)	875, 1219, 1883, 1925, 1948
Hpy166II	GTNNAC	3 cut(s)	256, 1020, 1086
Hpy188I	TCNGA	6 cut(s)	76, 795, 1332, 1610, 1683, 1929
Hpy8I	GTNNAC	3 cut(s)	256, 1020, 1086
Hpy99I	CGWCG	1 cut(s)	530
HpyAV	CCTTC	8 cut(s)	10, 71, 942, 954, 1342, 1397, 1518, 1741
HpyCH4III	ACNGT	8 cut(s)	343, 476, 574, 632, 1015, 1090, 1580, 1985
HpyCH4IV	ACGT	1 cut(s)	453
HpyCH4V	TGCA	9 cut(s)	132, 191, 383, 1427, 1464, 1588, 1633, 1757, 1841
HpyF10VI	GCNNNNNNNGC	6 cut(s)	107, 184, 714, 1407, 1433, 1796
HpyF3I	CTNAG	7 cut(s)	12, 1233, 1329, 1362, 1778, 1899, 1994
HpySE526I	ACGT	1 cut(s)	453
HspAI	GCGC	5 cut(s)	49, 81, 441, 1723, 1799
Kpn2I	TCCGGA	1 cut(s)	1183
Kzo9I	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	2 cut(s)	577, 765
Lsp1109I	GCAGC	3 cut(s)	119, 307, 1420
LweI	GCATC	6 cut(s)	370, 387, 447, 1451, 1766, 1828
MaeI	CTAG	6 cut(s)	779, 1158, 1529, 1619, 1860, 1919
MaeII	ACGT	1 cut(s)	453
MaeIII	GTNAC	7 cut(s)	68, 209, 1076, 1125, 1773, 1913, 1979
MalI	GATC	6 cut(s)	227, 621, 641, 955, 1444, 1607
MbiI	CCGCTC	1 cut(s)	768
MboI	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
MfeI	CAATTG	1 cut(s)	444
MflI	RGATCY	1 cut(s)	1442
MhlI	GDGCHC	3 cut(s)	676, 1058, 1473
MlsI	TGGCCA	1 cut(s)	1320
MluCI	AATT	6 cut(s)	303, 444, 514, 563, 614, 1930
MluNI	TGGCCA	1 cut(s)	1320
MlyI	GAGTC	5 cut(s)	65, 749, 1074, 1699, 1918
MnlI	CCTC	9 cut(s)	421, 717, 724, 789, 1364, 1514, 1860, 1904, 1908
Mox20I	TGGCCA	1 cut(s)	1320
Mph1103I	ATGCAT	1 cut(s)	193
MroI	TCCGGA	1 cut(s)	1183
MroXI	GAANNNNTTC	3 cut(s)	743, 789, 1536
MscI	TGGCCA	1 cut(s)	1320
MseI	TTAA	4 cut(s)	849, 935, 1218, 1550
MslI	CAYNNNNRTG	3 cut(s)	1091, 1110, 1581
Msp20I	TGGCCA	1 cut(s)	1320
MspA1I	CMGCKG	1 cut(s)	1433
MspI	CCGG	1 cut(s)	1184
MspR9I	CCNGG	2 cut(s)	1211, 1317
MunI	CAATTG	1 cut(s)	444
Mva1269I	GAATGC	4 cut(s)	809, 1429, 1486, 1887
MvaI	CCWGG	2 cut(s)	1211, 1317
MwoI	GCNNNNNNNGC	6 cut(s)	107, 184, 714, 1407, 1433, 1796
NdeII	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
NlaIV	GGNNCC	5 cut(s)	491, 692, 989, 1012, 1649
NmuCI	GTSAC	6 cut(s)	68, 1076, 1125, 1773, 1913, 1979
NsbI	TGCGCA	2 cut(s)	1724, 1800
NsiI	ATGCAT	1 cut(s)	193
NspI	RCATGY	7 cut(s)	172, 191, 1084, 1338, 1723, 1733, 1799
NspV	TTCGAA	1 cut(s)	585
OliI	CACNNNNGTG	1 cut(s)	1581
PaeI	GCATGC	1 cut(s)	191
PagI	TCATGA	2 cut(s)	813, 904
PciI	ACATGT	4 cut(s)	168, 1080, 1334, 1729
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	4 cut(s)	809, 1429, 1486, 1887
PdmI	GAANNNNTTC	3 cut(s)	743, 789, 1536
PfeI	GAWTC	2 cut(s)	901, 1117
PflMI	CCANNNNNTGG	2 cut(s)	574, 700
PkrI	GCNGC	7 cut(s)	109, 322, 1043, 1376, 1400, 1435, 1792
PleI	GAGTC	5 cut(s)	65, 749, 1073, 1699, 1918
PpsI	GAGTC	5 cut(s)	65, 749, 1073, 1699, 1918
PpuMI	RGGWCCY	2 cut(s)	19, 1313
PscI	ACATGT	4 cut(s)	168, 1080, 1334, 1729
PshAI	GACNNNNGTC	1 cut(s)	1986
Psp5II	RGGWCCY	2 cut(s)	19, 1313
Psp6I	CCWGG	2 cut(s)	1209, 1315
PspEI	GGTNACC	1 cut(s)	1913
PspGI	CCWGG	2 cut(s)	1209, 1315
PspN4I	GGNNCC	5 cut(s)	491, 692, 989, 1012, 1649
PspPI	GGNCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
PspPPI	RGGWCCY	2 cut(s)	19, 1313
PstI	CTGCAG	1 cut(s)	134
PstNI	CAGNNNCTG	1 cut(s)	636
PsuI	RGATCY	1 cut(s)	1442
PvuII	CAGCTG	1 cut(s)	1433
RsaI	GTAC	4 cut(s)	411, 554, 997, 1810
RsaNI	GTAC	4 cut(s)	410, 553, 996, 1809
RseI	CAYNNNNRTG	3 cut(s)	1091, 1110, 1581
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	4 cut(s)	849, 935, 1218, 1550
SatI	GCNGC	7 cut(s)	108, 321, 1042, 1375, 1399, 1434, 1791
Sau3AI	GATC	6 cut(s)	225, 619, 639, 953, 1442, 1605
Sau96I	GGNCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
ScaI	AGTACT	1 cut(s)	997
SchI	GAGTC	5 cut(s)	65, 749, 1074, 1699, 1918
ScrFI	CCNGG	2 cut(s)	1211, 1317
SduI	GDGCHC	3 cut(s)	676, 1058, 1473
SfaNI	GCATC	6 cut(s)	370, 387, 447, 1451, 1766, 1828
SfcI	CTRYAG	2 cut(s)	130, 1984
SfuI	TTCGAA	1 cut(s)	585
SinI	GGWCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
SmiMI	CAYNNNNRTG	3 cut(s)	1091, 1110, 1581
SmlI	CTYRAG	1 cut(s)	675
SmoI	CTYRAG	1 cut(s)	675
SpeI	ACTAGT	1 cut(s)	778
SphI	GCATGC	1 cut(s)	191
Sse9I	AATT	6 cut(s)	303, 444, 514, 563, 614, 1930
SsiI	CCGC	7 cut(s)	768, 1041, 1230, 1374, 1398, 1652, 1790
SspMI	CTAG	6 cut(s)	779, 1158, 1529, 1619, 1860, 1919
StyD4I	CCNGG	2 cut(s)	1209, 1315
StyI	CCWWGG	1 cut(s)	1418
TaaI	ACNGT	8 cut(s)	343, 476, 574, 632, 1015, 1090, 1580, 1985
TaiI	ACGT	1 cut(s)	456
TaqI	TCGA	7 cut(s)	585, 618, 783, 876, 1148, 1473, 1625
TaqII	GACCGA	3 cut(s)	819, 1303, 1807
TasI	AATT	6 cut(s)	303, 444, 514, 563, 614, 1930
TatI	WGTACW	3 cut(s)	409, 995, 1808
TauI	GCSGC	4 cut(s)	1044, 1377, 1401, 1793
TfiI	GAWTC	2 cut(s)	901, 1117
Tru1I	TTAA	4 cut(s)	849, 935, 1218, 1550
Tru9I	TTAA	4 cut(s)	849, 935, 1218, 1550
TscAI	CASTG	4 cut(s)	1095, 1134, 1583, 1606
TseFI	GTSAC	6 cut(s)	68, 1076, 1125, 1773, 1913, 1979
TseI	GCWGC	3 cut(s)	107, 320, 1433
Tsp45I	GTSAC	6 cut(s)	68, 1076, 1125, 1773, 1913, 1979
TspRI	CASTG	4 cut(s)	1095, 1134, 1583, 1606
Van91I	CCANNNNNTGG	2 cut(s)	574, 700
VpaK11BI	GGWCC	7 cut(s)	19, 802, 988, 1313, 1569, 1647, 1819
XagI	CCTNNNNNAGG	1 cut(s)	1898
XapI	RAATTY	3 cut(s)	563, 614, 1930
XceI	RCATGY	7 cut(s)	172, 191, 1084, 1338, 1723, 1733, 1799
XcmI	CCANNNNNNNNNTGG	2 cut(s)	701, 1207
XmnI	GAANNNNTTC	3 cut(s)	743, 789, 1536
XspI	CTAG	6 cut(s)	779, 1158, 1529, 1619, 1860, 1919
ZrmI	AGTACT	1 cut(s)	997
Zsp2I	ATGCAT	1 cut(s)	193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.