Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000607

Physical Location & Seq

Genomic Coordinates Forward (+)

29264255 .. 29266669

Gene Structure 2415 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g28751.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGGAGGCTTCCGAGACCGTAGAGTCCATTCATCTTTCAGACGACACTGAAGAGGCCATTCATCTTTCCGACACCGAAGATAACGAAACTGACGAGCCTATTGACCTTGAAGTGTCTTGGGAGGATGTCTTAGACTACCGAAAGTTGACAGTTGAAGATGTCATGGCTAAGACGTTCAAAACACTAGAGGAAGCCGAGAAATTCTATTATTCCTATGCGTTGGCAATTGGCTTCGAACCAAGGAGGGACACAAGAGGAGGATTGTTTGAGGGTAAGCTTCGAAGGAGACAGTGGGTTTGCAACAAGCAAGGTTATCGAGATAAAAAGTGGCTCGATCGCGAAACTGATGGGAGTGGTCGTAATCGTCGGAAGTTGACAAGGCAAGGTTGCATGGCGAAGGTCAGAGTGAATTACATGGTAGATGAAGGCTATTACGCGGGGAAAAAGCCAACTGCTGTGATCACGGATGGGGCTGAGTCCATGCATATTGCGATTGGACAAGTCATGCCGGAAGCTAGGCACCGTCTTTGTAGCTGGCACCTCTCCAGAAACGCCCATACAAACTTGAACTCGAAAGACGCGGAAAAAGCTTTTAACGGGTGCATGAATAAGTTTCAAACCGTACAGCATTTCGAGGAAATGTGGGAAGTTATGTTGCAAGAATTTGAGCTGCGCAACCACTTCTGGACCACCTGGATGTATGGGAGACGACAATTGTGGGCACAAGAATTTTTTGGAGATGTTCACATGGCCGGCATGAGAAGCACTCAAAGGAGTGAGAGCATGAATAATTTTGTCAAAGACACTCTTGGGGCCGGGAAGAAGAAAATGGTGGACATCGTTCCGCAGATGGACCGAGCACATATGAGACTGAGGAATAATCAAGTGAGGGATGATTTCAACACCATGAACTCCTTTCCTGTCATCGAGACTCACTTGGAGGATCTGGAGGGACATGCAGCTTCCACTTACACATATGATGTGTACAAGTGGGTTAAGAAAGAGATAATGAAGGAGAAATTCCTGGTCACAAAAGGTTTCCAAGCTGCCGCTGAGGATGACCATTCAGTGCACAAAATGGCAAATTTCAAGCGGCAACAATATGTGCACGAGGTTGTGTACTACCACGGGAGATTAACTACAGATGAAGAAGCCCTGGAGGAGGCGGTTCTCCCCCCAATCATGGTGTATGGACAAAATATGGATAAAGAAGCATTGGAGGTCAGTAGGTTCGGTGCATTGACAGGTGATTGTAATCGGATGTGTTCTCATGCTTCAAAGACCACAAAAGGATATAGTATGTTGAAGAAGGAGATAGCCAGGCTGACCGCATTAATGGAAGGTGTCGTCAAAGATAATGAGCAGGTGCACGTGTGTGACCCCCAGCCTGAGAGGACTGGCTGTGTTATACGAGATCCGGTAGTCGTTAAGAAGAAAGGCAACCAGAATCAGGAAACAGGGCGACGACCGATTACTTGTAGCTATTGCAAGGGAGCAGGCCACAATATCCAGTCATGTGGGGAAAGGAAGGAGAAAGAAAGGGAAGCGGCAGCGCAACAAAGTGTGGGAGAAGACAACCCACCTTCTGTATCCACTCCTGCAAAGAAAGTTTATCATTGTGGTAAGGGCAAGGGGCCTGGCCACACAGCACGATCATGCAAAAACGCTCCGGCACCCAGTAACAATGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

564

Amino Acids

64.56

Weight (kDa)

6.74

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	67 - 143	2.7e-09	FAR1 DNA-binding domain
MULE	PF10551	147 - 184	1.4e-06	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000607)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g29041 FvH4_2g05300 FvH4_2g08491 FvH4_2g12592 FvH4_2g16601 FvH4_3g17521 FvH4_3g17741 FvH4_3g23821 FvH4_3g26292 FvH4_3g26554 FvH4_3g31811 FvH4_3g31840 FvH4_3g31881 FvH4_3g43760 FvH4_3g46000 FvH4_4g00252 FvH4_4g00253 FvH4_4g08102 FvH4_4g08643 FvH4_4g08976 FvH4_4g10123 FvH4_4g10211 FvH4_4g15670 FvH4_4g16722 FvH4_4g22041 FvH4_4g26211 FvH4_4g28751 FvH4_4g33572 FvH4_5g14271 FvH4_5g16041 FvH4_5g18831 FvH4_5g21091 FvH4_5g24054 FvH4_5g25100 FvH4_5g25922 FvH4_5g28641 FvH4_5g30671 FvH4_5g37992 FvH4_6g12050 FvH4_6g19900 FvH4_6g20111 FvH4_6g27110 FvH4_6g30731 FvH4_7g03533 FvH4_7g03535 FvH4_7g04902
prunus_persica	Prupe.7G011500_v2.0.a1
pyrus_communis	pycom13g23420
rosa_laevigata	RLG00000001881 RLG00000009213 RLG00000013649 RLG00000019918 RLG00000022552 RLG00000023369
rosa_multiflora	Rmu_co8122264.1_g000001 Rmu_sc0000308.1_g000015 Rmu_sc0001498.1_g000012 Rmu_sc0002268.1_g000018 Rmu_sc0003433.1_g000009 Rmu_sc0003776.1_g000024 Rmu_sc0004702.1_g000009 Rmu_sc0005399.1_g000009 Rmu_sc0005578.1_g000002 Rmu_sc0005580.1_g000010 Rmu_sc0012425.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226140 Rroxscaffold_3G00229900 Rroxscaffold_3G00229910 Rroxscaffold_4G00317870 Rroxscaffold_6G00401500
rosa_rugosa	Rorug07G0258900
rosa_samantha	Rh1DG057600 Rh6AG088300 Rh7DG367800 Rh7DG408700
rosa_wichuraiana	Rw1G008000 Rw6G012040 Rw7G021280 Rw7G034100 Rw7G040490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1354
AasI	GACNNNNNNGTC	1 cut(s)	22
Acc16I	TGCGCA	1 cut(s)	674
Acc36I	ACCTGC	1 cut(s)	1354
AccB1I	GGYRCC	3 cut(s)	519, 537, 1672
AccII	CGCG	3 cut(s)	339, 437, 581
AciI	CCGC	8 cut(s)	437, 581, 845, 1050, 1093, 1166, 1329, 1547
AclWI	GGATC	2 cut(s)	951, 1409
AcoI	YGGCCR	2 cut(s)	750, 1639
AcsI	RAATTY	5 cut(s)	200, 662, 728, 1019, 1084
AcuI	CTGAAG	1 cut(s)	69
AcvI	CACGTG	1 cut(s)	1372
AfaI	GTAC	3 cut(s)	624, 986, 1121
AfiI	CCNNNNNNNGG	3 cut(s)	1162, 1183, 1450
AflIII	ACRYGT	1 cut(s)	1371
AgsI	TTSAA	9 cut(s)	110, 155, 178, 568, 617, 901, 1090, 1278, 1306
AjnI	CCWGG	5 cut(s)	692, 1023, 1155, 1319, 1636
AleI	CACNNNNGTG	1 cut(s)	1374
AluBI	AGCT	8 cut(s)	277, 515, 534, 590, 670, 962, 1046, 1482
AluI	AGCT	8 cut(s)	277, 515, 534, 590, 670, 962, 1046, 1482
Alw21I	GWGCWC	4 cut(s)	862, 1074, 1110, 1371
Alw26I	GTCTC	5 cut(s)	8, 280, 700, 862, 923
Alw44I	GTGCAC	3 cut(s)	1070, 1106, 1367
AlwI	GGATC	2 cut(s)	951, 1409
AoxI	GGCC	6 cut(s)	54, 750, 813, 1498, 1634, 1639
ApaLI	GTGCAC	3 cut(s)	1070, 1106, 1367
ApeKI	GCWGC	4 cut(s)	670, 959, 1046, 1550
ApoI	RAATTY	5 cut(s)	200, 662, 728, 1019, 1084
ArsI	GACNNNNNNTTYG	2 cut(s)	279, 311
AseI	ATTAAT	1 cut(s)	1334
AspLEI	GCGC	2 cut(s)	675, 1555
AspS9I	GGNCC	4 cut(s)	687, 813, 853, 1634
AsuC2I	CCSGG	1 cut(s)	817
AsuHPI	GGTGA	1 cut(s)	1259
AsuII	TTCGAA	2 cut(s)	234, 280
AvaII	GGWCC	2 cut(s)	687, 853
BaeGI	GKGCMC	4 cut(s)	724, 1074, 1110, 1371
BalI	TGGCCA	1 cut(s)	1641
BanI	GGYRCC	3 cut(s)	519, 537, 1672
BauI	CACGAG	1 cut(s)	1109
BbrPI	CACGTG	1 cut(s)	1372
BbsI	GAAGAC	1 cut(s)	1578
Bbv12I	GWGCWC	4 cut(s)	862, 1074, 1110, 1371
BbvCI	CCTCAGC	1 cut(s)	1053
BbvI	GCAGC	4 cut(s)	657, 971, 1033, 1562
BccI	CCATC	3 cut(s)	341, 461, 844
BcgI	CGANNNNNNTGC	2 cut(s)	296, 330
BciT130I	CCWGG	5 cut(s)	694, 1025, 1157, 1321, 1638
BciVI	GTATCC	1 cut(s)	1600
BclI	TGATCA	1 cut(s)	459
BcnI	CCSGG	1 cut(s)	817
BcoDI	GTCTC	5 cut(s)	8, 280, 700, 862, 923
BfaI	CTAG	2 cut(s)	185, 516
BfmI	CTRYAG	1 cut(s)	1140
BfuAI	ACCTGC	1 cut(s)	1354
BfuI	GTATCC	1 cut(s)	1600
BisI	GCNGC	7 cut(s)	671, 960, 1047, 1050, 1094, 1548, 1551
BlsI	GCNGC	7 cut(s)	672, 961, 1048, 1051, 1095, 1549, 1552
Bme1390I	CCNGG	6 cut(s)	694, 817, 1025, 1157, 1321, 1638
Bme18I	GGWCC	2 cut(s)	687, 853
BmgT120I	GGNCC	4 cut(s)	687, 813, 853, 1634
BmiI	GGNNCC	5 cut(s)	521, 539, 814, 1635, 1674
BmrFI	CCNGG	6 cut(s)	694, 817, 1025, 1157, 1321, 1638
BmrI	ACTGGG	1 cut(s)	1671
BmuI	ACTGGG	1 cut(s)	1671
BpiI	GAAGAC	1 cut(s)	1578
BplI	GAGNNNNNCTC	2 cut(s)	751, 783
BpmI	CTGGAG	3 cut(s)	529, 968, 1178
Bpu10I	CCTNAGC	1 cut(s)	1053
Bpu14I	TTCGAA	2 cut(s)	234, 280
BpuMI	CCSGG	1 cut(s)	817
BsaAI	YACGTR	1 cut(s)	1372
BsaBI	GATNNNNATC	1 cut(s)	1254
BsaI	GGTCTC	1 cut(s)	8
BsaJI	CCNNGG	3 cut(s)	239, 1126, 1155
BsaWI	WCCGGW	1 cut(s)	1417
BsaXI	ACNNNNNCTCC	2 cut(s)	343, 373
Bsc4I	CCNNNNNNNGG	3 cut(s)	1162, 1183, 1450
Bse118I	RCCGGY	1 cut(s)	752
Bse1I	ACTGG	3 cut(s)	1402, 1510, 1677
Bse8I	GATNNNNATC	1 cut(s)	1254
BseBI	CCWGG	5 cut(s)	694, 1025, 1157, 1321, 1638
BseDI	CCNNGG	3 cut(s)	239, 1126, 1155
BseGI	GGATG	6 cut(s)	130, 472, 702, 898, 1063, 1266
BseJI	GATNNNNATC	1 cut(s)	1254
BseLI	CCNNNNNNNGG	3 cut(s)	1162, 1183, 1450
BseMII	CTCAG	4 cut(s)	465, 863, 1044, 1380
BseNI	ACTGG	3 cut(s)	1402, 1510, 1677
BseRI	GAGGAG	2 cut(s)	270, 1175
BseSI	GKGCMC	4 cut(s)	724, 1074, 1110, 1371
BseXI	GCAGC	4 cut(s)	657, 971, 1033, 1562
BseYI	CCCAGC	1 cut(s)	1383
Bsh1236I	CGCG	3 cut(s)	339, 437, 581
Bsh1285I	CGRYCG	2 cut(s)	337, 1469
BshFI	GGCC	6 cut(s)	56, 752, 815, 1500, 1636, 1641
BshNI	GGYRCC	3 cut(s)	519, 537, 1672
BsiEI	CGRYCG	2 cut(s)	337, 1469
BsiHKAI	GWGCWC	4 cut(s)	862, 1074, 1110, 1371
BsiSI	CCGG	5 cut(s)	509, 753, 816, 1418, 1670
BslFI	GGGAC	2 cut(s)	260, 966
BslI	CCNNNNNNNGG	3 cut(s)	1162, 1183, 1450
BsmAI	GTCTC	5 cut(s)	8, 280, 700, 862, 923
BsmBI	CGTCTC	1 cut(s)	700
BsmFI	GGGAC	2 cut(s)	260, 966
BsnI	GGCC	6 cut(s)	56, 752, 815, 1500, 1636, 1641
Bso31I	GGTCTC	1 cut(s)	8
Bsp119I	TTCGAA	2 cut(s)	234, 280
Bsp1286I	GDGCHC	5 cut(s)	724, 862, 1074, 1110, 1371
Bsp1407I	TGTACA	1 cut(s)	984
Bsp143I	GATC	5 cut(s)	334, 459, 943, 1414, 1652
Bsp68I	TCGCGA	1 cut(s)	339
BspACI	CCGC	8 cut(s)	437, 581, 845, 1050, 1093, 1166, 1329, 1547
BspANI	GGCC	6 cut(s)	56, 752, 815, 1500, 1636, 1641
BspCNI	CTCAG	4 cut(s)	466, 864, 1045, 1381
BspFNI	CGCG	3 cut(s)	339, 437, 581
BspLI	GGNNCC	5 cut(s)	521, 539, 814, 1635, 1674
BspMI	ACCTGC	1 cut(s)	1354
BspPI	GGATC	2 cut(s)	951, 1409
BspT104I	TTCGAA	2 cut(s)	234, 280
BspT107I	GGYRCC	3 cut(s)	519, 537, 1672
BspTNI	GGTCTC	1 cut(s)	8
BsrFI	RCCGGY	1 cut(s)	752
BsrGI	TGTACA	1 cut(s)	984
BsrI	ACTGG	3 cut(s)	1402, 1510, 1677
BssAI	RCCGGY	1 cut(s)	752
BssECI	CCNNGG	3 cut(s)	239, 1126, 1155
BssMI	GATC	5 cut(s)	334, 459, 943, 1414, 1652
BssSI	CACGAG	1 cut(s)	1109
BssT1I	CCWWGG	1 cut(s)	239
Bst2BI	CACGAG	1 cut(s)	1109
Bst2UI	CCWGG	5 cut(s)	694, 1025, 1157, 1321, 1638
Bst4CI	ACNGT	5 cut(s)	19, 151, 291, 524, 622
Bst6I	CTCTTC	1 cut(s)	45
BstAUI	TGTACA	1 cut(s)	984
BstBAI	YACGTR	1 cut(s)	1372
BstBI	TTCGAA	2 cut(s)	234, 280
BstC8I	GCNNGC	3 cut(s)	536, 754, 1498
BstDEI	CTNAG	6 cut(s)	130, 168, 474, 872, 1053, 1389
BstDSI	CCRYGG	1 cut(s)	1126
BstENI	CCTNNNNNAGG	1 cut(s)	1160
BstF5I	GGATG	6 cut(s)	130, 472, 702, 898, 1063, 1266
BstFNI	CGCG	3 cut(s)	339, 437, 581
BstHHI	GCGC	2 cut(s)	675, 1555
BstKTI	GATC	5 cut(s)	337, 462, 946, 1417, 1655
BstMAI	GTCTC	5 cut(s)	8, 280, 700, 862, 923
BstMBI	GATC	5 cut(s)	334, 459, 943, 1414, 1652
BstMCI	CGRYCG	2 cut(s)	337, 1469
BstMWI	GCNNNNNNNGC	2 cut(s)	587, 762
BstNI	CCWGG	5 cut(s)	694, 1025, 1157, 1321, 1638
BstNSI	RCATGY	1 cut(s)	959
BstSCI	CCNGG	6 cut(s)	692, 815, 1023, 1155, 1319, 1636
BstSFI	CTRYAG	1 cut(s)	1140
BstSLI	GKGCMC	4 cut(s)	724, 1074, 1110, 1371
BstUI	CGCG	3 cut(s)	339, 437, 581
BstV1I	GCAGC	4 cut(s)	657, 971, 1033, 1562
BstV2I	GAAGAC	1 cut(s)	1578
BstX2I	RGATCY	2 cut(s)	943, 1414
BstXI	CCANNNNNNTGG	1 cut(s)	1517
BstYI	RGATCY	2 cut(s)	943, 1414
BsuI	GTATCC	1 cut(s)	1600
BsuRI	GGCC	6 cut(s)	56, 752, 815, 1500, 1636, 1641
BtgI	CCRYGG	1 cut(s)	1126
BtsCI	GGATG	6 cut(s)	130, 472, 702, 898, 1063, 1266
BtsIMutI	CAGTG	3 cut(s)	45, 296, 1074
BtuMI	TCGCGA	1 cut(s)	339
BveI	ACCTGC	1 cut(s)	1354
Cac8I	GCNNGC	3 cut(s)	536, 754, 1498
CfoI	GCGC	2 cut(s)	675, 1555
Cfr10I	RCCGGY	1 cut(s)	752
Cfr13I	GGNCC	4 cut(s)	687, 813, 853, 1634
CseI	GACGC	1 cut(s)	587
Csp6I	GTAC	3 cut(s)	623, 985, 1120
CviQI	GTAC	3 cut(s)	623, 985, 1120
DdeI	CTNAG	6 cut(s)	130, 168, 474, 872, 1053, 1389
DpnI	GATC	5 cut(s)	336, 461, 945, 1416, 1654
DpnII	GATC	5 cut(s)	334, 459, 943, 1414, 1652
DrdI	GACNNNNNNGTC	1 cut(s)	22
DseDI	GACNNNNNNGTC	1 cut(s)	22
EaeI	YGGCCR	2 cut(s)	750, 1639
Eam1104I	CTCTTC	1 cut(s)	45
EarI	CTCTTC	1 cut(s)	45
Eco130I	CCWWGG	1 cut(s)	239
Eco31I	GGTCTC	1 cut(s)	8
Eco47I	GGWCC	2 cut(s)	687, 853
Eco57I	CTGAAG	1 cut(s)	69
Eco72I	CACGTG	1 cut(s)	1372
EcoNI	CCTNNNNNAGG	1 cut(s)	1160
EcoO109I	RGGNCCY	1 cut(s)	1634
EcoRII	CCWGG	5 cut(s)	692, 1023, 1155, 1319, 1636
EcoT14I	CCWWGG	1 cut(s)	239
EcoT22I	ATGCAT	1 cut(s)	486
ErhI	CCWWGG	1 cut(s)	239
Esp3I	CGTCTC	1 cut(s)	700
FalI	AAGNNNNNCTT	2 cut(s)	792, 824
FaqI	GGGAC	2 cut(s)	260, 966
FauI	CCCGC	1 cut(s)	430
FauNDI	CATATG	2 cut(s)	864, 976
FbaI	TGATCA	1 cut(s)	459
Fnu4HI	GCNGC	7 cut(s)	671, 960, 1047, 1050, 1094, 1548, 1551
FokI	GGATG	6 cut(s)	137, 479, 709, 905, 1070, 1273
Fsp4HI	GCNGC	7 cut(s)	671, 960, 1047, 1050, 1094, 1548, 1551
FspBI	CTAG	2 cut(s)	185, 516
FspI	TGCGCA	1 cut(s)	674
GlaI	GCGC	2 cut(s)	674, 1554
GluI	GCNGC	7 cut(s)	671, 960, 1047, 1050, 1094, 1548, 1551
GsaI	CCCAGC	1 cut(s)	1387
GsuI	CTGGAG	3 cut(s)	529, 968, 1178
HaeIII	GGCC	6 cut(s)	56, 752, 815, 1500, 1636, 1641
HapII	CCGG	5 cut(s)	509, 753, 816, 1418, 1670
HgaI	GACGC	1 cut(s)	587
HhaI	GCGC	2 cut(s)	675, 1555
Hin6I	GCGC	2 cut(s)	673, 1553
HinP1I	GCGC	2 cut(s)	673, 1553
HincII	GTYRAC	2 cut(s)	147, 375
HindII	GTYRAC	2 cut(s)	147, 375
HindIII	AAGCTT	2 cut(s)	275, 588
HinfI	GANTC	4 cut(s)	23, 476, 931, 1447
HpaII	CCGG	5 cut(s)	509, 753, 816, 1418, 1670
HphI	GGTGA	1 cut(s)	1259
Hpy166II	GTNNAC	9 cut(s)	147, 375, 745, 835, 985, 1072, 1108, 1120, 1369
Hpy188I	TCNGA	6 cut(s)	13, 40, 70, 369, 404, 1260
Hpy188III	TCNNGA	7 cut(s)	317, 338, 546, 685, 928, 947, 1451
Hpy8I	GTNNAC	9 cut(s)	147, 375, 745, 835, 985, 1072, 1108, 1120, 1369
Hpy99I	CGWCG	2 cut(s)	369, 1467
HpyAV	CCTTC	8 cut(s)	276, 391, 419, 1006, 1303, 1334, 1522, 1593
HpyCH4III	ACNGT	5 cut(s)	19, 151, 291, 524, 622
HpyCH4IV	ACGT	2 cut(s)	173, 1371
HpyF10VI	GCNNNNNNNGC	2 cut(s)	587, 762
HpyF3I	CTNAG	6 cut(s)	130, 168, 474, 872, 1053, 1389
HpySE526I	ACGT	2 cut(s)	173, 1371
HspAI	GCGC	2 cut(s)	673, 1553
KroI	GCCGGC	1 cut(s)	752
KroNI	GCCGGC	1 cut(s)	754
Ksp22I	TGATCA	1 cut(s)	459
Kzo9I	GATC	5 cut(s)	334, 459, 943, 1414, 1652
LmnI	GCTCC	2 cut(s)	1493, 1672
Lsp1109I	GCAGC	4 cut(s)	657, 971, 1033, 1562
MaeI	CTAG	2 cut(s)	185, 516
MaeII	ACGT	2 cut(s)	173, 1371
MaeIII	GTNAC	3 cut(s)	1027, 1376, 1679
MalI	GATC	5 cut(s)	336, 461, 945, 1416, 1654
MboI	GATC	5 cut(s)	334, 459, 943, 1414, 1652
MboII	GAAGA	9 cut(s)	62, 89, 167, 832, 835, 1160, 1318, 1444, 1583
MfeI	CAATTG	2 cut(s)	225, 713
MflI	RGATCY	2 cut(s)	943, 1414
MhlI	GDGCHC	5 cut(s)	724, 862, 1074, 1110, 1371
MlsI	TGGCCA	1 cut(s)	1641
MluCI	AATT	9 cut(s)	200, 225, 409, 662, 713, 728, 790, 1019, 1084
MluNI	TGGCCA	1 cut(s)	1641
MlyI	GAGTC	3 cut(s)	32, 485, 925
MmeI	TCCRAC	2 cut(s)	93, 347
Mox20I	TGGCCA	1 cut(s)	1641
Mph1103I	ATGCAT	1 cut(s)	486
MroNI	GCCGGC	1 cut(s)	752
MscI	TGGCCA	1 cut(s)	1641
MseI	TTAA	5 cut(s)	594, 996, 1136, 1334, 1428
MslI	CAYNNNNRTG	3 cut(s)	695, 1374, 1654
Msp20I	TGGCCA	1 cut(s)	1641
MspA1I	CMGCKG	1 cut(s)	1052
MspI	CCGG	5 cut(s)	509, 753, 816, 1418, 1670
MspR9I	CCNGG	6 cut(s)	694, 817, 1025, 1157, 1321, 1638
MunI	CAATTG	2 cut(s)	225, 713
MvaI	CCWGG	5 cut(s)	694, 1025, 1157, 1321, 1638
MvnI	CGCG	3 cut(s)	339, 437, 581
MwoI	GCNNNNNNNGC	2 cut(s)	587, 762
NaeI	GCCGGC	1 cut(s)	754
NciI	CCSGG	1 cut(s)	817
NdeI	CATATG	2 cut(s)	864, 976
NdeII	GATC	5 cut(s)	334, 459, 943, 1414, 1652
NgoMIV	GCCGGC	1 cut(s)	752
NlaIV	GGNNCC	5 cut(s)	521, 539, 814, 1635, 1674
NmeAIII	GCCGAG	1 cut(s)	220
NmuCI	GTSAC	2 cut(s)	1027, 1376
NruI	TCGCGA	1 cut(s)	339
NsbI	TGCGCA	1 cut(s)	674
NsiI	ATGCAT	1 cut(s)	486
NspI	RCATGY	1 cut(s)	959
NspV	TTCGAA	2 cut(s)	234, 280
OliI	CACNNNNGTG	1 cut(s)	1374
PaqCI	CACCTGC	1 cut(s)	1354
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PdiI	GCCGGC	1 cut(s)	754
PfeI	GAWTC	1 cut(s)	1447
PkrI	GCNGC	7 cut(s)	672, 961, 1048, 1051, 1095, 1549, 1552
Ple19I	CGATCG	1 cut(s)	337
PleI	GAGTC	3 cut(s)	31, 484, 925
PmaCI	CACGTG	1 cut(s)	1372
PmlI	CACGTG	1 cut(s)	1372
PpsI	GAGTC	3 cut(s)	31, 484, 925
Ppu21I	YACGTR	1 cut(s)	1372
PshBI	ATTAAT	1 cut(s)	1334
Psp6I	CCWGG	5 cut(s)	692, 1023, 1155, 1319, 1636
PspCI	CACGTG	1 cut(s)	1372
PspFI	CCCAGC	1 cut(s)	1383
PspGI	CCWGG	5 cut(s)	692, 1023, 1155, 1319, 1636
PspN4I	GGNNCC	5 cut(s)	521, 539, 814, 1635, 1674
PspPI	GGNCC	4 cut(s)	687, 813, 853, 1634
PsuI	RGATCY	2 cut(s)	943, 1414
PvuI	CGATCG	1 cut(s)	337
RruI	TCGCGA	1 cut(s)	339
RsaI	GTAC	3 cut(s)	624, 986, 1121
RsaNI	GTAC	3 cut(s)	623, 985, 1120
RseI	CAYNNNNRTG	3 cut(s)	695, 1374, 1654
SaqAI	TTAA	5 cut(s)	594, 996, 1136, 1334, 1428
SatI	GCNGC	7 cut(s)	671, 960, 1047, 1050, 1094, 1548, 1551
Sau3AI	GATC	5 cut(s)	334, 459, 943, 1414, 1652
Sau96I	GGNCC	4 cut(s)	687, 813, 853, 1634
SchI	GAGTC	3 cut(s)	32, 485, 925
ScrFI	CCNGG	6 cut(s)	694, 817, 1025, 1157, 1321, 1638
SduI	GDGCHC	5 cut(s)	724, 862, 1074, 1110, 1371
SfcI	CTRYAG	1 cut(s)	1140
SfuI	TTCGAA	2 cut(s)	234, 280
SinI	GGWCC	2 cut(s)	687, 853
SmiMI	CAYNNNNRTG	3 cut(s)	695, 1374, 1654
Sse9I	AATT	9 cut(s)	200, 225, 409, 662, 713, 728, 790, 1019, 1084
SsiI	CCGC	8 cut(s)	437, 581, 845, 1050, 1093, 1166, 1329, 1547
SspMI	CTAG	2 cut(s)	185, 516
StyD4I	CCNGG	6 cut(s)	692, 815, 1023, 1155, 1319, 1636
StyI	CCWWGG	1 cut(s)	239
TaaI	ACNGT	5 cut(s)	19, 151, 291, 524, 622
TaiI	ACGT	2 cut(s)	176, 1374
TaqI	TCGA	7 cut(s)	234, 280, 316, 333, 572, 633, 927
TaqII	GACCGA	2 cut(s)	870, 1483
TasI	AATT	9 cut(s)	200, 225, 409, 662, 713, 728, 790, 1019, 1084
TatI	WGTACW	2 cut(s)	984, 1119
TauI	GCSGC	3 cut(s)	1052, 1096, 1550
TfiI	GAWTC	1 cut(s)	1447
Tru1I	TTAA	5 cut(s)	594, 996, 1136, 1334, 1428
Tru9I	TTAA	5 cut(s)	594, 996, 1136, 1334, 1428
TscAI	CASTG	3 cut(s)	52, 296, 1074
TseFI	GTSAC	2 cut(s)	1027, 1376
TseI	GCWGC	4 cut(s)	670, 959, 1046, 1550
Tsp45I	GTSAC	2 cut(s)	1027, 1376
TspDTI	ATGAA	8 cut(s)	20, 50, 438, 620, 800, 923, 1025, 1161
TspGWI	ACGGA	1 cut(s)	479
TspRI	CASTG	3 cut(s)	52, 296, 1074
VneI	GTGCAC	3 cut(s)	1070, 1106, 1367
VpaK11BI	GGWCC	2 cut(s)	687, 853
VspI	ATTAAT	1 cut(s)	1334
XagI	CCTNNNNNAGG	1 cut(s)	1160
XapI	RAATTY	5 cut(s)	200, 662, 728, 1019, 1084
XceI	RCATGY	1 cut(s)	959
XspI	CTAG	2 cut(s)	185, 516
Zsp2I	ATGCAT	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.