Rmu_sc0012425.1_g000001

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012425.1
Physical Location & Seq
Forward (+)
1 .. 279
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012425.1_g000001.1.cds

Sequence Viewer

Length: 279 bp
aagatgccaatagttgtactcacagatggagatgaagccatgcgtagtgcaattgaagacgtgatgccacaagcaaagcaccgtctttgtgcttggcacctttccaaaaacgccaacactaatttgaagtgcgacaaaaagttgaaagcttttaacaggtgcatgagaaaattccaaactgtggagcagttcaaagtaatgtggcacgacatagtggagaaattcgttctccacaacagtttctggatcaacatgatgtatgagaaacgagacaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

92

Amino Acids

11.03

Weight (kDa)

9.3

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 96
AccB7I CCANNNNNTGG 1 cut(s) 181
AclWI GGATC 1 cut(s) 254
AcsI RAATTY 2 cut(s) 170, 221
AfaI GTAC 1 cut(s) 18
AfiI CCNNNNNNNGG 1 cut(s) 181
AgsI TTSAA 4 cut(s) 56, 127, 145, 193
AjiI CACGTC 1 cut(s) 61
AluBI AGCT 1 cut(s) 149
AluI AGCT 1 cut(s) 149
Alw26I GTCTC 1 cut(s) 264
AlwI GGATC 1 cut(s) 254
AlwNI CAGNNNCTG 1 cut(s) 243
ApoI RAATTY 2 cut(s) 170, 221
BanI GGYRCC 1 cut(s) 96
BbsI GAAGAC 1 cut(s) 63
BccI CCATC 1 cut(s) 20
BcoDI GTCTC 1 cut(s) 264
BmgBI CACGTC 1 cut(s) 61
BmiI GGNNCC 1 cut(s) 98
BmsI GCATC 1 cut(s) 54
BpiI GAAGAC 1 cut(s) 63
Bsc4I CCNNNNNNNGG 1 cut(s) 181
BseLI CCNNNNNNNGG 1 cut(s) 181
BshNI GGYRCC 1 cut(s) 96
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 1 cut(s) 264
Bsp143I GATC 1 cut(s) 246
BspLI GGNNCC 1 cut(s) 98
BspPI GGATC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 96
BssMI GATC 1 cut(s) 246
Bst4CI ACNGT 3 cut(s) 83, 181, 239
BstKTI GATC 1 cut(s) 249
BstMAI GTCTC 1 cut(s) 264
BstMBI GATC 1 cut(s) 246
BstV2I GAAGAC 1 cut(s) 63
BtrI CACGTC 1 cut(s) 61
CaiI CAGNNNCTG 1 cut(s) 243
Csp6I GTAC 1 cut(s) 17
CviAII CATG 3 cut(s) 40, 163, 253
CviJI RGCY 2 cut(s) 38, 149
CviKI_1 RGCY 2 cut(s) 38, 149
CviQI GTAC 1 cut(s) 17
DpnI GATC 1 cut(s) 248
DpnII GATC 1 cut(s) 246
FaeI CATG 3 cut(s) 43, 166, 256
FaiI YATR 5 cut(s) 41, 164, 212, 254, 261
FatI CATG 3 cut(s) 39, 162, 252
Hin1II CATG 3 cut(s) 43, 166, 256
HindIII AAGCTT 1 cut(s) 147
Hpy188III TCNNGA 1 cut(s) 244
HpyCH4III ACNGT 3 cut(s) 83, 181, 239
HpyCH4IV ACGT 1 cut(s) 60
HpyCH4V TGCA 2 cut(s) 50, 162
HpySE526I ACGT 1 cut(s) 60
Hsp92II CATG 3 cut(s) 43, 166, 256
Kzo9I GATC 1 cut(s) 246
LmnI GCTCC 1 cut(s) 184
LpnPI CCDG 2 cut(s) 142, 229
LweI GCATC 1 cut(s) 54
MaeII ACGT 1 cut(s) 60
MalI GATC 1 cut(s) 248
MboI GATC 1 cut(s) 246
MboII GAAGA 1 cut(s) 68
MfeI CAATTG 1 cut(s) 51
MluCI AATT 5 cut(s) 51, 121, 170, 221, 274
MseI TTAA 1 cut(s) 153
MunI CAATTG 1 cut(s) 51
NdeII GATC 1 cut(s) 246
NlaIII CATG 3 cut(s) 43, 166, 256
NlaIV GGNNCC 1 cut(s) 98
PflMI CCANNNNNTGG 1 cut(s) 181
PspN4I GGNNCC 1 cut(s) 98
PstNI CAGNNNCTG 1 cut(s) 243
RsaI GTAC 1 cut(s) 18
RsaNI GTAC 1 cut(s) 17
SaqAI TTAA 1 cut(s) 153
Sau3AI GATC 1 cut(s) 246
SetI ASST 4 cut(s) 63, 102, 151, 161
SfaNI GCATC 1 cut(s) 54
SgeI CNNG 9 cut(s) 52, 73, 83, 105, 169, 175, 218, 256, 265
Sse9I AATT 5 cut(s) 51, 121, 170, 221, 274
TaaI ACNGT 3 cut(s) 83, 181, 239
TaiI ACGT 1 cut(s) 63
TasI AATT 5 cut(s) 51, 121, 170, 221, 274
TatI WGTACW 1 cut(s) 16
Tru1I TTAA 1 cut(s) 153
Tru9I TTAA 1 cut(s) 153
TspDTI ATGAA 1 cut(s) 48
Van91I CCANNNNNTGG 1 cut(s) 181
XapI RAATTY 2 cut(s) 170, 221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.