Rmu_co8122264.1_g000001

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8122264.1
Physical Location & Seq
Reverse (-)
2 .. 457
456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8122264.1_g000001.1.cds

Sequence Viewer

Length: 295 bp
atgaacgctctggcaacacaagacctatacttctactgcaggttcaatgtagatatagaagacagtgctgctcttcttgtcaatgaaacgattgagacatacacttggctattgcgttcgtttttggatgcaatgaatgggaagatgtcaatagatgtactcacagatggagatgaggccatgcatagtgcaattgcagacctgatgccacaagcaaagcactgtctttgtgcttggcacctttccagaaatgccaacactaatttgaagtgcaacgaaaagttgaaagctttta
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

98

Amino Acids

11.12

Weight (kDa)

4.92

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 30
AccB1I GGYRCC 1 cut(s) 237
AfaI GTAC 1 cut(s) 159
AgsI TTSAA 3 cut(s) 46, 268, 286
AluBI AGCT 1 cut(s) 290
AluI AGCT 1 cut(s) 290
Alw26I GTCTC 1 cut(s) 89
AoxI GGCC 1 cut(s) 177
ApeKI GCWGC 1 cut(s) 68
BanI GGYRCC 1 cut(s) 237
BbsI GAAGAC 1 cut(s) 66
BbvI GCAGC 1 cut(s) 55
BccI CCATC 1 cut(s) 161
BcoDI GTCTC 1 cut(s) 89
BfmI CTRYAG 1 cut(s) 37
BfuAI ACCTGC 1 cut(s) 30
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
BmiI GGNNCC 1 cut(s) 239
BmsI GCATC 2 cut(s) 118, 195
BpiI GAAGAC 1 cut(s) 66
Bse3DI GCAATG 1 cut(s) 138
BseGI GGATG 1 cut(s) 133
BseMI GCAATG 1 cut(s) 138
BseXI GCAGC 1 cut(s) 55
BshFI GGCC 1 cut(s) 179
BshNI GGYRCC 1 cut(s) 237
BsmAI GTCTC 1 cut(s) 89
BsnI GGCC 1 cut(s) 179
BspANI GGCC 1 cut(s) 179
BspLI GGNNCC 1 cut(s) 239
BspMAI CTGCAG 1 cut(s) 41
BspMI ACCTGC 1 cut(s) 30
BspQI GCTCTTC 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 237
BsrDI GCAATG 1 cut(s) 138
Bst4CI ACNGT 2 cut(s) 65, 224
Bst6I CTCTTC 1 cut(s) 78
BstF5I GGATG 1 cut(s) 133
BstMAI GTCTC 1 cut(s) 89
BstSFI CTRYAG 1 cut(s) 37
BstV1I GCAGC 1 cut(s) 55
BstV2I GAAGAC 1 cut(s) 66
BsuRI GGCC 1 cut(s) 179
BtsCI GGATG 1 cut(s) 133
BtsIMutI CAGTG 2 cut(s) 70, 220
BveI ACCTGC 1 cut(s) 30
Csp6I GTAC 1 cut(s) 158
CviAII CATG 1 cut(s) 181
CviJI RGCY 3 cut(s) 109, 179, 290
CviKI_1 RGCY 3 cut(s) 109, 179, 290
CviQI GTAC 1 cut(s) 158
Eam1104I CTCTTC 1 cut(s) 78
EarI CTCTTC 1 cut(s) 78
EcoT22I ATGCAT 1 cut(s) 186
FaeI CATG 1 cut(s) 184
FaiI YATR 5 cut(s) 28, 56, 100, 182, 186
FatI CATG 1 cut(s) 180
Fnu4HI GCNGC 1 cut(s) 69
FokI GGATG 1 cut(s) 140
Fsp4HI GCNGC 1 cut(s) 69
GluI GCNGC 1 cut(s) 69
HaeIII GGCC 1 cut(s) 179
Hin1II CATG 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 288
Hpy188III TCNNGA 1 cut(s) 246
HpyCH4III ACNGT 2 cut(s) 65, 224
HpyCH4V TGCA 6 cut(s) 39, 131, 184, 191, 197, 273
Hsp92II CATG 1 cut(s) 184
LguI GCTCTTC 1 cut(s) 78
LpnPI CCDG 3 cut(s) 25, 215, 259
Lsp1109I GCAGC 1 cut(s) 55
LweI GCATC 2 cut(s) 118, 195
MboII GAAGA 3 cut(s) 65, 71, 154
MfeI CAATTG 1 cut(s) 192
MluCI AATT 2 cut(s) 192, 262
MnlI CCTC 1 cut(s) 169
Mph1103I ATGCAT 1 cut(s) 186
MunI CAATTG 1 cut(s) 192
NlaIII CATG 1 cut(s) 184
NlaIV GGNNCC 1 cut(s) 239
NsiI ATGCAT 1 cut(s) 186
PciSI GCTCTTC 1 cut(s) 78
PkrI GCNGC 1 cut(s) 70
PspN4I GGNNCC 1 cut(s) 239
PstI CTGCAG 1 cut(s) 41
RsaI GTAC 1 cut(s) 159
RsaNI GTAC 1 cut(s) 158
SapI GCTCTTC 1 cut(s) 78
SatI GCNGC 1 cut(s) 69
SetI ASST 5 cut(s) 27, 44, 204, 243, 292
SfaNI GCATC 2 cut(s) 118, 195
SfcI CTRYAG 1 cut(s) 37
Sse9I AATT 2 cut(s) 192, 262
TaaI ACNGT 2 cut(s) 65, 224
TasI AATT 2 cut(s) 192, 262
TatI WGTACW 1 cut(s) 157
TscAI CASTG 2 cut(s) 70, 227
TseI GCWGC 1 cut(s) 68
TspDTI ATGAA 3 cut(s) 17, 99, 149
TspRI CASTG 2 cut(s) 70, 227
Zsp2I ATGCAT 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.