RLG00000028240

DNA polymerase processivity factor activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000347
Physical Location & Seq
Forward (+)
20446028 .. 20452953
6926 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028240

Sequence Viewer

Length: 1539 bp
ATGTCACGCTGGTTTGAGCTCAAGCTTGATTTTGCTGAAGCTATTCTGCTCAAGAAAGCCGTAAGAGTCTTCACTCAGGTAGCCTATTCAGACCGAGAGCTCCCTACTTCCATGTTCAACAATTTCATCCCCAACAACGCCGACTTCCACTTATCTCCGACCATGGTCCTACTGGTTTCCACAAACTCGCATTTTCGGCTTTCGGAAATGACCACTGTGCTGGCGATGCCGCACTCCTCCATGTCGAGATTATGGTGCTCCAAGAGCTGCCGCACGCTGTGTGGTTCTCTTTATGGTGATGAACAAGCTGTTGATAGGGTTTTCTGTGAAATTGGGGATGATGATGGCATCAAATACTCTTCTACACTGCCAGTGATTTCATGGTGGGATCAGATTCAGATGGACCTAGGTTTCGTAGGATATGAATATCCAATGAGGCTTGGCTTGTCTTCAGAGATTTTTTGTTCTGTTATCACTGAATTGAATTCTCATGGGTTTAAAGTTCATGCCAAAGTATCAGAAACCCAAGTTGTGTTCCGGGTAGTGAATAAAAAAACTGTCTTCAAAAGACAGCCCGGGATTTGCGAGATTGAGATTGTTGGTGATAGATATCCGTTTGAATTAAAGTTTGATCTCCAGCACAAGAGTGCGTTTCTCAATGCTGCTAGACTGTCAAAGATGAAGGCCTTGAGACCCCTGTGTGAGACTGCCTACTTCCCGGACGAAATTTCCCTCGCCGGAAAGATCCGCGACTCCGGCCACTTCTGCATATCTCCGGACGGGGTTCTTATCGCCTCCACAACCTCTTTCCCTCCTCATCTTGACGCCTATCTCGAACTGCCGCGTGCGACCTTCGCCGCCCTTCGCTGCCACAAGGACCACGTGCTCCGCCTCAACCTCCGCCTCTTGGAGGACCGAATCGCCTCCTCAACCACCGTCAACGGTAGTGATGGTGTTTCTGCATGCTTCTCCGGAGAGAAGTACAGGCACAGCGCCTTGCTCTATTCTCTGAGGGACAAGGAAGGTTTTGCCGTGCACAGCTCTGAGATACCGCTCATTTGCTCCTATCCCGGTTTTCTGGCGACGTTAGATTGGTCAGATTACAGTTATCAACTCAGCATTGAGATGCCGGCGGAGACTTTTAAGCAACTCATCAATTCTCTGAGCTTGTATGGGTTTGCAGTTCGTGCCACCGTGACAATTACTCAAATCATGTTCCGTGTAGTCAATGAGGAGGTTGTTCTGAGGGCAGAGGCTGAGGTCTACAAGATTCTGCGTTCGAGAAGTCGATATCCGTATTTGTTGGAATTTGGTCTCCATCAAAAGAGTGCATTCCTGAATGCTGCGAGTCTATCAGACACAGTTAGGCTTCACCAGCTTTTGGATTTACGCACTGTGTTGGAGGTACCTGTTAAGGGACTCGTAGATGTTGCAGAATCTGTCTCCATCACCATTGTTGACAACATCTTTGTCGTGTTGGAGCTTGGAAAAGCATACTCTTCATTCAACATCACATACATACTCTGGACCGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03030 ko03410 ko03420 ko03430 ko04110 ko04530 ko05161 ko05166 map03030 map03410 map03420 map03430 map04110 map04530 map05161 map05166
Pfam Domains
Protein Families
PCNA_C PCNA_N Vezatin

Protein Analysis

513

Amino Acids

57.86

Weight (kDa)

6.29

Isoelectric Point (pI)

38.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000347)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g09240 FvH4_7g13760 FvH4_7g13770 FvH4_7g13770 FvH4_7g13770 FvH4_7g13770 FvH4_7g13770 FvH4_7g13770 FvH4_7g13770 FvH4_7g13770 FvH4_7g13780
prunus_persica Prupe.2G162800_v2.0.a1 Prupe.2G163000_v2.0.a1 Prupe.2G163100_v2.0.a1 Prupe.2G163200_v2.0.a1 Prupe.2G163300_v2.0.a1 Prupe.2G163400_v2.0.a1 Prupe.2G163600_v2.0.a1 Prupe.2G163700_v2.0.a1
pyrus_communis pycom07g13980
rosa_chinensis RchiOBHm_Chr1g0331901 RchiOBHm_Chr1g0353761 RchiOBHm_Chr1g0353841 RchiOBHm_Chr1g0353861 RchiOBHm_Chr1g0353871 RchiOBHm_Chr1g0353881 RchiOBHm_Chr1g0353981 RchiOBHm_Chr2g0131681
rosa_laevigata RLG00000000740 RLG00000028239 RLG00000028240 RLG00000028246 RLG00000028247 RLG00000028248 RLG00000028250 RLG00000028259 RLG00000028419 RLG00000029705
rosa_multiflora Rmu_sc0001763.1_g000004 Rmu_sc0005552.1_g000004 Rmu_sc0005552.1_g000006 Rmu_sc0005947.1_g000015 Rmu_sc0006326.1_g000048 Rmu_sc0006326.1_g000049 Rmu_sc0007658.1_g000010 Rmu_sc0007658.1_g000012 Rmu_sc0021704.1_g000001 Rmu_sc0026369.1_g000001
rosa_roxburghii Rroxscaffold_1G00022360 Rroxscaffold_4G00290550 Rroxscaffold_4G00301410 Rroxscaffold_4G00301420 Rroxscaffold_4G00301500 Rroxscaffold_4G00301510 Rroxscaffold_4G00301520 Rroxscaffold_4G00301540 Rroxscaffold_4G00301670
rosa_rugosa Rorug01G0237800 Rorug01G0238800 Rorug01G0238900 Rorug01G0238900 Rorug01G0238900 Rorug01G0239000 Rorug01G0239100 Rorug01G0239200 Rorug01G0239500 Rorug01G0239500 Rorug01G0239600 Rorug01G0239700
rosa_samantha Rh1AG231800 Rh1AG249800 Rh1AG250400 Rh1AG250500 Rh1AG250700 Rh1AG251000 Rh1AG251100 Rh1BG220100 Rh1BG221000 Rh1BG221100 Rh1BG221300 Rh1BG221500 Rh1BG221600 Rh1BG222000 Rh1BG222600 Rh1BG222700 Rh1CG232400 Rh1CG233200 Rh1CG233400 Rh1CG233500 Rh1CG233700 Rh1CG234200 Rh1CG234300 Rh1CG234400 Rh1CG235000 Rh1CG235100 Rh1CG235200 Rh1DG247100 Rh1DG247900 Rh1DG248000 Rh1DG248200 Rh1DG248500 Rh1DG249400 Rh1DG249500 Rh4BG391700 Rh6AG423500 Rh7BG455700 Rh7CG500500 Rh7DG468700
rosa_wichuraiana Rw1G021870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1405
AccB1I GGYRCC 1 cut(s) 1405
AccB7I CCANNNNNTGG 1 cut(s) 1381
AccBSI CCGCTC 1 cut(s) 1054
AccI GTMKAC 1 cut(s) 1263
AccII CGCG 2 cut(s) 750, 844
AccIII TCCGGA 2 cut(s) 775, 971
AciI CCGC 9 cut(s) 230, 271, 748, 842, 858, 889, 901, 1052, 1133
AclWI GGATC 2 cut(s) 396, 739
AcoI YGGCCR 1 cut(s) 757
AcsI RAATTY 3 cut(s) 484, 726, 1307
AcuI CTGAAG 2 cut(s) 57, 435
AcvI CACGTG 1 cut(s) 883
AcyI GRCGYC 1 cut(s) 825
AdeI CACNNNGTG 1 cut(s) 279
AfaI GTAC 2 cut(s) 983, 1407
AfiI CCNNNNNNNGG 4 cut(s) 907, 910, 1381, 1415
AgsI TTSAA 5 cut(s) 118, 484, 565, 620, 1507
AleI CACNNNNGTG 1 cut(s) 645
Alw21I GWGCWC 5 cut(s) 21, 102, 260, 888, 1038
Alw26I GTCTC 5 cut(s) 685, 698, 1130, 1319, 1447
Alw44I GTGCAC 1 cut(s) 1034
AlwI GGATC 2 cut(s) 396, 739
AlwNI CAGNNNCTG 2 cut(s) 1256, 1439
Ama87I CYCGRG 1 cut(s) 575
Aor13HI TCCGGA 2 cut(s) 775, 971
AoxI GGCC 2 cut(s) 684, 757
ApaLI GTGCAC 1 cut(s) 1034
ApeKI GCWGC 4 cut(s) 267, 662, 867, 1343
ApoI RAATTY 3 cut(s) 484, 726, 1307
ArsI GACNNNNNNTTYG 4 cut(s) 395, 427, 1451, 1483
Asp700I GAANNNNTTC 1 cut(s) 42
Asp718I GGTACC 1 cut(s) 1405
AspA2I CCTAGG 1 cut(s) 406
AspLEI GCGC 1 cut(s) 995
AspS9I GGNCC 5 cut(s) 166, 403, 877, 913, 1527
AsuC2I CCSGG 5 cut(s) 539, 576, 577, 719, 1071
AsuHPI GGTGA 4 cut(s) 308, 614, 1364, 1441
AvaI CYCGRG 1 cut(s) 575
AvaII GGWCC 5 cut(s) 166, 403, 877, 913, 1527
AvrII CCTAGG 1 cut(s) 406
BaeGI GKGCMC 1 cut(s) 1038
BanI GGYRCC 1 cut(s) 1405
BanII GRGCYC 2 cut(s) 21, 102
BbrPI CACGTG 1 cut(s) 883
BbsI GAAGAC 3 cut(s) 61, 441, 553
Bbv12I GWGCWC 5 cut(s) 21, 102, 260, 888, 1038
BbvCI CCTCAGC 1 cut(s) 1257
BbvI GCAGC 4 cut(s) 254, 649, 854, 1330
BccI CCATC 5 cut(s) 338, 394, 944, 1326, 1454
BceAI ACGGC 2 cut(s) 44, 1016
BcnI CCSGG 5 cut(s) 539, 576, 577, 719, 1071
BcoDI GTCTC 5 cut(s) 685, 698, 1130, 1319, 1447
BfaI CTAG 2 cut(s) 407, 666
BfoI RGCGCY 1 cut(s) 996
BisI GCNGC 8 cut(s) 230, 268, 271, 663, 842, 858, 868, 1344
BlnI CCTAGG 1 cut(s) 406
BlsI GCNGC 8 cut(s) 231, 269, 272, 664, 843, 859, 869, 1345
Bme1390I CCNGG 5 cut(s) 539, 576, 577, 719, 1071
Bme18I GGWCC 5 cut(s) 166, 403, 877, 913, 1527
BmeT110I CYCGRG 1 cut(s) 575
BmgT120I GGNCC 5 cut(s) 166, 403, 877, 913, 1527
BmiI GGNNCC 1 cut(s) 1407
BmrFI CCNGG 5 cut(s) 539, 576, 577, 719, 1071
BmsI GCATC 3 cut(s) 216, 357, 1116
BoxI GACNNNNGTC 1 cut(s) 164
BpiI GAAGAC 3 cut(s) 61, 441, 553
BpmI CTGGAG 1 cut(s) 620
Bpu10I CCTNAGC 1 cut(s) 1257
BpuEI CTTGAG 3 cut(s) 5, 35, 709
BpuMI CCSGG 5 cut(s) 539, 576, 577, 719, 1071
BsaAI YACGTR 1 cut(s) 883
BsaBI GATNNNNATC 1 cut(s) 609
BsaHI GRCGYC 1 cut(s) 825
BsaI GGTCTC 2 cut(s) 685, 1319
BsaJI CCNNGG 3 cut(s) 162, 406, 575
BsaWI WCCGGW 2 cut(s) 775, 971
Bsc4I CCNNNNNNNGG 4 cut(s) 907, 910, 1381, 1415
Bse118I RCCGGY 1 cut(s) 1129
Bse1I ACTGG 2 cut(s) 177, 371
Bse8I GATNNNNATC 1 cut(s) 609
BseAI TCCGGA 2 cut(s) 775, 971
BseDI CCNNGG 3 cut(s) 162, 406, 575
BseGI GGATG 2 cut(s) 126, 343
BseJI GATNNNNATC 1 cut(s) 609
BseLI CCNNNNNNNGG 4 cut(s) 907, 910, 1381, 1415
BseMII CTCAG 7 cut(s) 89, 1001, 1035, 1129, 1154, 1235, 1248
BseNI ACTGG 2 cut(s) 177, 371
BseRI GAGGAG 4 cut(s) 226, 804, 916, 1247
BseSI GKGCMC 1 cut(s) 1038
BseXI GCAGC 4 cut(s) 254, 649, 854, 1330
Bsh1236I CGCG 2 cut(s) 750, 844
BshFI GGCC 2 cut(s) 686, 759
BshNI GGYRCC 1 cut(s) 1405
BsiHKAI GWGCWC 5 cut(s) 21, 102, 260, 888, 1038
BsiHKCI CYCGRG 1 cut(s) 575
BsiSI CCGG 9 cut(s) 538, 576, 719, 738, 756, 776, 972, 1071, 1130
BslFI GGGAC 2 cut(s) 1028, 1431
BslI CCNNNNNNNGG 4 cut(s) 907, 910, 1381, 1415
BsmAI GTCTC 5 cut(s) 685, 698, 1130, 1319, 1447
BsmFI GGGAC 2 cut(s) 1028, 1431
BsmI GAATGC 2 cut(s) 1331, 1345
BsnI GGCC 2 cut(s) 686, 759
Bso31I GGTCTC 2 cut(s) 685, 1319
BsoBI CYCGRG 1 cut(s) 575
Bsp1286I GDGCHC 5 cut(s) 21, 102, 260, 888, 1038
Bsp13I TCCGGA 2 cut(s) 775, 971
Bsp143I GATC 3 cut(s) 388, 631, 744
Bsp19I CCATGG 1 cut(s) 162
BspACI CCGC 9 cut(s) 230, 271, 748, 842, 858, 889, 901, 1052, 1133
BspANI GGCC 2 cut(s) 686, 759
BspCNI CTCAG 7 cut(s) 88, 1002, 1036, 1128, 1155, 1236, 1249
BspEI TCCGGA 2 cut(s) 775, 971
BspFNI CGCG 2 cut(s) 750, 844
BspLI GGNNCC 1 cut(s) 1407
BspPI GGATC 2 cut(s) 396, 739
BspT107I GGYRCC 1 cut(s) 1405
BspTNI GGTCTC 2 cut(s) 685, 1319
BsrBI CCGCTC 1 cut(s) 1054
BsrFI RCCGGY 1 cut(s) 1129
BsrI ACTGG 2 cut(s) 177, 371
BssAI RCCGGY 1 cut(s) 1129
BssECI CCNNGG 3 cut(s) 162, 406, 575
BssMI GATC 3 cut(s) 388, 631, 744
BssNI GRCGYC 1 cut(s) 825
BssT1I CCWWGG 2 cut(s) 162, 406
Bst4CI ACNGT 9 cut(s) 217, 559, 672, 937, 944, 1106, 1195, 1363, 1396
Bst6I CTCTTC 2 cut(s) 364, 1504
BstACI GRCGYC 1 cut(s) 825
BstAPI GCANNNNNTGC 1 cut(s) 1187
BstBAI YACGTR 1 cut(s) 883
BstC8I GCNNGC 5 cut(s) 222, 275, 846, 964, 1131
BstDEI CTNAG 7 cut(s) 75, 1010, 1044, 1115, 1163, 1244, 1257
BstDSI CCRYGG 1 cut(s) 162
BstENI CCTNNNNNAGG 1 cut(s) 908
BstF5I GGATG 2 cut(s) 126, 343
BstFNI CGCG 2 cut(s) 750, 844
BstH2I RGCGCY 1 cut(s) 996
BstHHI GCGC 1 cut(s) 995
BstKTI GATC 3 cut(s) 391, 634, 747
BstMAI GTCTC 5 cut(s) 685, 698, 1130, 1319, 1447
BstMBI GATC 3 cut(s) 388, 631, 744
BstMWI GCNNNNNNNGC 8 cut(s) 196, 226, 264, 756, 765, 854, 1187, 1375
BstNSI RCATGY 1 cut(s) 966
BstPAI GACNNNNGTC 1 cut(s) 164
BstSCI CCNGG 5 cut(s) 537, 574, 575, 717, 1069
BstSLI GKGCMC 1 cut(s) 1038
BstUI CGCG 2 cut(s) 750, 844
BstV1I GCAGC 4 cut(s) 254, 649, 854, 1330
BstV2I GAAGAC 3 cut(s) 61, 441, 553
BstX2I RGATCY 1 cut(s) 744
BstXI CCANNNNNNTGG 1 cut(s) 220
BstYI RGATCY 1 cut(s) 744
BsuRI GGCC 2 cut(s) 686, 759
BtgI CCRYGG 1 cut(s) 162
BtgZI GCGATG 1 cut(s) 239
BtsCI GGATG 2 cut(s) 126, 343
BtsI GCAGTG 1 cut(s) 365
BtsIMutI CAGTG 5 cut(s) 213, 365, 378, 474, 1392
Cac8I GCNNGC 5 cut(s) 222, 275, 846, 964, 1131
CaiI CAGNNNCTG 2 cut(s) 1256, 1439
CfoI GCGC 1 cut(s) 995
Cfr10I RCCGGY 1 cut(s) 1129
Cfr13I GGNCC 5 cut(s) 166, 403, 877, 913, 1527
Cfr9I CCCGGG 1 cut(s) 575
CseI GACGC 1 cut(s) 833
Csp6I GTAC 2 cut(s) 982, 1406
CviAII CATG 8 cut(s) 112, 163, 241, 381, 491, 506, 963, 1213
CviQI GTAC 2 cut(s) 982, 1406
DdeI CTNAG 7 cut(s) 75, 1010, 1044, 1115, 1163, 1244, 1257
DpnI GATC 3 cut(s) 390, 633, 746
DpnII GATC 3 cut(s) 388, 631, 744
DraI TTTAAA 1 cut(s) 499
DraIII CACNNNGTG 1 cut(s) 279
EaeI YGGCCR 1 cut(s) 757
Eam1104I CTCTTC 2 cut(s) 364, 1504
EarI CTCTTC 2 cut(s) 364, 1504
EciI GGCGGA 3 cut(s) 878, 890, 1148
Ecl136II GAGCTC 2 cut(s) 19, 100
Eco130I CCWWGG 2 cut(s) 162, 406
Eco147I AGGCCT 1 cut(s) 686
Eco24I GRGCYC 2 cut(s) 21, 102
Eco31I GGTCTC 2 cut(s) 685, 1319
Eco32I GATATC 2 cut(s) 611, 1292
Eco47I GGWCC 5 cut(s) 166, 403, 877, 913, 1527
Eco53kI GAGCTC 2 cut(s) 19, 100
Eco57I CTGAAG 2 cut(s) 57, 435
Eco72I CACGTG 1 cut(s) 883
Eco88I CYCGRG 1 cut(s) 575
EcoICRI GAGCTC 2 cut(s) 19, 100
EcoNI CCTNNNNNAGG 1 cut(s) 908
EcoRI GAATTC 1 cut(s) 484
EcoRV GATATC 2 cut(s) 611, 1292
EcoT14I CCWWGG 2 cut(s) 162, 406
EcoT38I GRGCYC 2 cut(s) 21, 102
ErhI CCWWGG 2 cut(s) 162, 406
FaeI CATG 8 cut(s) 115, 166, 244, 384, 494, 509, 966, 1216
FaqI GGGAC 2 cut(s) 1028, 1431
FatI CATG 8 cut(s) 111, 162, 240, 380, 490, 505, 962, 1212
FblI GTMKAC 1 cut(s) 1263
Fnu4HI GCNGC 8 cut(s) 230, 268, 271, 663, 842, 858, 868, 1344
FokI GGATG 2 cut(s) 113, 350
FriOI GRGCYC 2 cut(s) 21, 102
Fsp4HI GCNGC 8 cut(s) 230, 268, 271, 663, 842, 858, 868, 1344
FspBI CTAG 2 cut(s) 407, 666
GlaI GCGC 1 cut(s) 994
GluI GCNGC 8 cut(s) 230, 268, 271, 663, 842, 858, 868, 1344
GsuI CTGGAG 1 cut(s) 620
HaeII RGCGCY 1 cut(s) 996
HaeIII GGCC 2 cut(s) 686, 759
HapII CCGG 9 cut(s) 538, 576, 719, 738, 756, 776, 972, 1071, 1130
HgaI GACGC 1 cut(s) 833
HhaI GCGC 1 cut(s) 995
Hin1I GRCGYC 1 cut(s) 825
Hin1II CATG 8 cut(s) 115, 166, 244, 384, 494, 509, 966, 1216
Hin6I GCGC 1 cut(s) 993
HinP1I GCGC 1 cut(s) 993
HincII GTYRAC 2 cut(s) 940, 1459
HindII GTYRAC 2 cut(s) 940, 1459
HindIII AAGCTT 1 cut(s) 23
HinfI GANTC 8 cut(s) 66, 394, 752, 918, 1270, 1348, 1419, 1436
HpaII CCGG 9 cut(s) 538, 576, 719, 738, 756, 776, 972, 1071, 1130
HphI GGTGA 4 cut(s) 308, 614, 1364, 1441
Hpy166II GTNNAC 4 cut(s) 940, 1036, 1264, 1459
Hpy188III TCNNGA 9 cut(s) 52, 246, 776, 821, 833, 972, 1281, 1336, 1525
Hpy8I GTNNAC 4 cut(s) 940, 1036, 1264, 1459
Hpy99I CGWCG 1 cut(s) 1087
HpyAV CCTTC 4 cut(s) 676, 862, 872, 1016
HpyCH4III ACNGT 9 cut(s) 217, 559, 672, 937, 944, 1106, 1195, 1363, 1396
HpyCH4IV ACGT 2 cut(s) 882, 1085
HpyCH4V TGCA 6 cut(s) 768, 962, 1036, 1181, 1331, 1433
HpyF10VI GCNNNNNNNGC 8 cut(s) 196, 226, 264, 756, 765, 854, 1187, 1375
HpyF3I CTNAG 7 cut(s) 75, 1010, 1044, 1115, 1163, 1244, 1257
HpySE526I ACGT 2 cut(s) 882, 1085
Hsp92I GRCGYC 1 cut(s) 825
Hsp92II CATG 8 cut(s) 115, 166, 244, 384, 494, 509, 966, 1216
HspAI GCGC 1 cut(s) 993
Kpn2I TCCGGA 2 cut(s) 775, 971
KpnI GGTACC 1 cut(s) 1409
KroI GCCGGC 1 cut(s) 1129
KroNI GCCGGC 1 cut(s) 1131
Kzo9I GATC 3 cut(s) 388, 631, 744
LmnI GCTCC 5 cut(s) 105, 263, 891, 1067, 1480
Lsp1109I GCAGC 4 cut(s) 254, 649, 854, 1330
LweI GCATC 3 cut(s) 216, 357, 1116
MaeI CTAG 2 cut(s) 407, 666
MaeII ACGT 2 cut(s) 882, 1085
MaeIII GTNAC 2 cut(s) 3, 1195
MalI GATC 3 cut(s) 390, 633, 746
MbiI CCGCTC 1 cut(s) 1054
MboI GATC 3 cut(s) 388, 631, 744
MboII GAAGA 5 cut(s) 61, 351, 441, 553, 1491
MflI RGATCY 1 cut(s) 744
MhlI GDGCHC 5 cut(s) 21, 102, 260, 888, 1038
MluCI AATT 9 cut(s) 121, 330, 479, 484, 620, 726, 1156, 1200, 1307
MlyI GAGTC 4 cut(s) 75, 746, 1357, 1413
MmeI TCCRAC 4 cut(s) 182, 1284, 1380, 1458
MroI TCCGGA 2 cut(s) 775, 971
MroNI GCCGGC 1 cut(s) 1129
MroXI GAANNNNTTC 1 cut(s) 42
MseI TTAA 4 cut(s) 498, 623, 1143, 1413
MslI CAYNNNNRTG 2 cut(s) 645, 1124
MspI CCGG 9 cut(s) 538, 576, 719, 738, 756, 776, 972, 1071, 1130
MspR9I CCNGG 5 cut(s) 539, 576, 577, 719, 1071
Mva1269I GAATGC 2 cut(s) 1331, 1345
MvnI CGCG 2 cut(s) 750, 844
MwoI GCNNNNNNNGC 8 cut(s) 196, 226, 264, 756, 765, 854, 1187, 1375
NaeI GCCGGC 1 cut(s) 1131
NciI CCSGG 5 cut(s) 539, 576, 577, 719, 1071
NcoI CCATGG 1 cut(s) 162
NdeII GATC 3 cut(s) 388, 631, 744
NgoMIV GCCGGC 1 cut(s) 1129
NlaIII CATG 8 cut(s) 115, 166, 244, 384, 494, 509, 966, 1216
NlaIV GGNNCC 1 cut(s) 1407
NmuCI GTSAC 2 cut(s) 3, 1195
NspI RCATGY 1 cut(s) 966
OliI CACNNNNGTG 1 cut(s) 645
PaeI GCATGC 1 cut(s) 966
PceI AGGCCT 1 cut(s) 686
PcsI WCGNNNNNNNCGW 1 cut(s) 831
PctI GAATGC 2 cut(s) 1331, 1345
PdiI GCCGGC 1 cut(s) 1131
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 4 cut(s) 394, 918, 1270, 1436
PflMI CCANNNNNTGG 1 cut(s) 1381
PfoI TCCNGGA 1 cut(s) 717
PkrI GCNGC 8 cut(s) 231, 269, 272, 664, 843, 859, 869, 1345
PleI GAGTC 4 cut(s) 74, 746, 1356, 1413
PmaCI CACGTG 1 cut(s) 883
PmlI CACGTG 1 cut(s) 883
PpsI GAGTC 4 cut(s) 74, 746, 1356, 1413
Ppu21I YACGTR 1 cut(s) 883
PshAI GACNNNNGTC 1 cut(s) 164
Psp124BI GAGCTC 2 cut(s) 21, 102
PspCI CACGTG 1 cut(s) 883
PspN4I GGNNCC 1 cut(s) 1407
PspPI GGNCC 5 cut(s) 166, 403, 877, 913, 1527
PstNI CAGNNNCTG 2 cut(s) 1256, 1439
PsuI RGATCY 1 cut(s) 744
RsaI GTAC 2 cut(s) 983, 1407
RsaNI GTAC 2 cut(s) 982, 1406
RseI CAYNNNNRTG 2 cut(s) 645, 1124
SacI GAGCTC 2 cut(s) 21, 102
SaqAI TTAA 4 cut(s) 498, 623, 1143, 1413
SatI GCNGC 8 cut(s) 230, 268, 271, 663, 842, 858, 868, 1344
Sau3AI GATC 3 cut(s) 388, 631, 744
Sau96I GGNCC 5 cut(s) 166, 403, 877, 913, 1527
SchI GAGTC 4 cut(s) 75, 746, 1357, 1413
ScrFI CCNGG 5 cut(s) 539, 576, 577, 719, 1071
SduI GDGCHC 5 cut(s) 21, 102, 260, 888, 1038
SfaNI GCATC 3 cut(s) 216, 357, 1116
SinI GGWCC 5 cut(s) 166, 403, 877, 913, 1527
SmaI CCCGGG 1 cut(s) 577
SmiMI CAYNNNNRTG 2 cut(s) 645, 1124
SmlI CTYRAG 3 cut(s) 20, 50, 688
SmoI CTYRAG 3 cut(s) 20, 50, 688
SphI GCATGC 1 cut(s) 966
Sse9I AATT 9 cut(s) 121, 330, 479, 484, 620, 726, 1156, 1200, 1307
SseBI AGGCCT 1 cut(s) 686
SsiI CCGC 9 cut(s) 230, 271, 748, 842, 858, 889, 901, 1052, 1133
SspMI CTAG 2 cut(s) 407, 666
SstI GAGCTC 2 cut(s) 21, 102
StuI AGGCCT 1 cut(s) 686
StyD4I CCNGG 5 cut(s) 537, 574, 575, 717, 1069
StyI CCWWGG 2 cut(s) 162, 406
TaaI ACNGT 9 cut(s) 217, 559, 672, 937, 944, 1106, 1195, 1363, 1396
TaiI ACGT 2 cut(s) 885, 1088
TaqI TCGA 4 cut(s) 245, 834, 1280, 1288
TaqII GACCGA 2 cut(s) 108, 930
TasI AATT 9 cut(s) 121, 330, 479, 484, 620, 726, 1156, 1200, 1307
TatI WGTACW 1 cut(s) 981
TauI GCSGC 4 cut(s) 232, 273, 844, 860
TfiI GAWTC 4 cut(s) 394, 918, 1270, 1436
Tru1I TTAA 4 cut(s) 498, 623, 1143, 1413
Tru9I TTAA 4 cut(s) 498, 623, 1143, 1413
TscAI CASTG 5 cut(s) 220, 372, 378, 481, 1399
TseFI GTSAC 2 cut(s) 3, 1195
TseI GCWGC 4 cut(s) 267, 662, 867, 1343
Tsp45I GTSAC 2 cut(s) 3, 1195
TspDTI ATGAA 7 cut(s) 115, 315, 369, 438, 494, 695, 1491
TspGWI ACGGA 3 cut(s) 603, 1208, 1284
TspMI CCCGGG 1 cut(s) 575
TspRI CASTG 5 cut(s) 220, 372, 378, 481, 1399
Van91I CCANNNNNTGG 1 cut(s) 1381
VneI GTGCAC 1 cut(s) 1034
VpaK11BI GGWCC 5 cut(s) 166, 403, 877, 913, 1527
XagI CCTNNNNNAGG 1 cut(s) 908
XapI RAATTY 3 cut(s) 484, 726, 1307
XceI RCATGY 1 cut(s) 966
XcmI CCANNNNNNNNNTGG 2 cut(s) 169, 378
XmaI CCCGGG 1 cut(s) 575
XmaJI CCTAGG 1 cut(s) 406
XmiI GTMKAC 1 cut(s) 1263
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 2 cut(s) 407, 666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.