Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006257.1

Orthogroup ID

OG0000427

Physical Location & Seq

Genomic Coordinates Reverse (-)

12771 .. 14965

Gene Structure 2195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006257.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1557 bp

atgacgaaaccaagcttccctcacatcttatctttattgcatctcattcttctcttcacattatcatctctgccaggcacattcgcagcccgcagactctcactcaaagaagccaccatagacgatctccagctcgcttttaagcacaaccaactcacctcgaggcaacttgtgcaatattacctttcccaaatccgaaaacttaacccggttctcaaaggagtcctagaagtcaacccggatgcgcttcaccttgccgacaaggctgacgatgagcgcaggaccaaggcatcagtgtcactactctctaagttgcatggcattcctattctggtcaaggacaacattgcaaccaaggataagatgaacactaccgccggctcttttgcgcttcttggatctgtcgtccctcgtgatgccggagtggtggagaagttgaggaaagaaggggccatcattttgggaaaggctagcttgagcgagtggtcaaattctaggtctaataatacagcaccaaatggttggagcgccagaggcggttatggcttgaacccttacacattctcagacccttgcggctcaagcagcggttcagcaatatcagtagcagcaaatctggcagcggtgtcattaggtaccgagacagatggttcaatcttatgtccatcaggttataactcggttgtgggcatcaaaccaacaatcggtcttactagtcgagcaggaattgtcccaatttctccaagacaagatactgttgggccaatttgtaggacagtagcagatgctacttatgttcttgatgccatagcaggaatcgaccacaatgacattgcaacgattgagacatcaaagtacattcccaaaggtggttatgcacagtttctcaggcgcgacggacttagaggaaaaagaatagggatactgagaggcttctatgactttggcaatgacacgtccttggctcaaacttttgagaaacatttcaacactctgaggaaaggaggtgctgttttggtagacaatttggaaattgctaatttgactgaaatctattcttcaagcgatgaagatactgcattgtttgttgagtacaaaatatccttaaatgcatacttgaaggagttggtggcttccccagtgcgatccttggcagatgttatagccttcaacaacaaacacccgaaactggaaaagatcaaggagtatgggcaagacgtatttttagctgttgaagcaacaaatggatttggaaaaacagagaagcgagcattgttgaatcttgcaaggtggacaagaaatggtcttgtaaaattggtgacagagaggaagctagatgctgtggtgactcctaaatcagattttcgaactgtacttgcaattgggggagccccaggtctaacagttccagctggatacgaaaacaatgggagaccagctggtatatgctttggtggacttcggggttcagagccaaagctaattgagattgcatatgcttttgagcaagccactaagattaggaagcctccttcgttcaaaggcttcaagttttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120

Pfam Domains

Protein Families

Amidase

Protein Analysis

518

Amino Acids

55.98

Weight (kDa)

9.44

Isoelectric Point (pI)

33.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G34880 AT4G34880
fragaria_vesca	FvH4_2g01710 FvH4_2g01720 FvH4_2g01722
malus_domestica	MD05G1117000.v1.1 MD05G1117200.v1.1 MD10G1120200.v1.1 MD10G1120300.v1.1 MD10G1120400.v1.1
prunus_persica	Prupe.8G161600_v2.0.a1 Prupe.8G161700_v2.0.a1 Prupe.8G161700_v2.0.a1 Prupe.8G161800_v2.0.a1 Prupe.8G161900_v2.0.a1
pyrus_communis	pycom05g06760 pycom10g10360 pycom10g10370 pycom17g11700
rosa_chinensis	RchiOBHm_Chr6g0244611 RchiOBHm_Chr6g0244621 RchiOBHm_Chr6g0244631 RchiOBHm_Chr6g0244671 RchiOBHm_Chr6g0244701 RchiOBHm_Chr6g0244721 RchiOBHm_Chr6g0244741 RchiOBHm_Chr6g0244751
rosa_laevigata	RLG00000015331 RLG00000015332 RLG00000015333 RLG00000015334 RLG00000015336 RLG00000015338 RLG00000015339 RLG00000015340
rosa_multiflora	Rmu_co8154324.1_g000001 Rmu_co8259027.1_g000001 Rmu_co8319583.1_g000001 Rmu_sc0002064.1_g000004 Rmu_sc0002522.1_g000021 Rmu_sc0002522.1_g000022 Rmu_sc0002522.1_g000023 Rmu_sc0002522.1_g000026 Rmu_sc0002522.1_g000027 Rmu_sc0006257.1_g000002 Rmu_sc0006635.1_g000001 Rmu_sc0006635.1_g000002 Rmu_sc0007349.1_g000001 Rmu_sc0011292.1_g000009 Rmu_sc0011292.1_g000010 Rmu_sc0039466.1_g000001
rosa_roxburghii	Rroxscaffold_7G00215530 Rroxscaffold_7G00215550 Rroxscaffold_7G00215560 Rroxscaffold_7G00215570 Rroxscaffold_7G00215610 Rroxscaffold_7G00215620 Rroxscaffold_7G00215630 Rroxscaffold_7G00215640
rosa_rugosa	Rorug05G0509900 Rorug05G0510000 Rorug05G0510000 Rorug05G0510100 Rorug05G0510100 Rorug05G0510200 Rorug05G0510300 Rorug05G0510400
rosa_samantha	Rh6BG020500 Rh6BG020600 Rh6BG020700 Rh6BG020900 Rh6BG021000 Rh6BG021100 Rh6BG021200 Rh6CG018800 Rh6CG019000 Rh6CG019100 Rh6CG019200 Rh6CG019300 Rh6CG019400 Rh6CG019600 Rh6CG019800 Rh6DG019900 Rh6DG020100 Rh6DG020200 Rh6DG020400
rosa_wichuraiana	Rw0G014670 Rw6G000010 Rw6G000020 Rw6G002100 Rw6G002110 Rw6G002120 Rw6G002140 Rw6G002150 Rw6G002160 Rw6G005110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	675
AbsI	CCTCGAGG	1 cut(s)	160
Acc65I	GGTACC	1 cut(s)	635
AccB1I	GGYRCC	1 cut(s)	635
AccI	GTMKAC	1 cut(s)	1020
AccII	CGCG	1 cut(s)	894
AciI	CCGC	6 cut(s)	91, 375, 537, 576, 588, 623
AclWI	GGATC	2 cut(s)	406, 1140
AcsI	RAATTY	1 cut(s)	490
AfaI	GTAC	4 cut(s)	637, 857, 1094, 1374
AfiI	CCNNNNNNNGG	3 cut(s)	704, 869, 1189
AflIII	ACRYGT	1 cut(s)	954
AhlI	ACTAGT	1 cut(s)	713
AjiI	CACGTC	1 cut(s)	957
AjnI	CCWGG	2 cut(s)	73, 1393
AluBI	AGCT	8 cut(s)	15, 133, 474, 1229, 1333, 1412, 1439, 1480
AluI	AGCT	8 cut(s)	15, 133, 474, 1229, 1333, 1412, 1439, 1480
Alw26I	GTCTC	3 cut(s)	635, 839, 1426
AlwI	GGATC	2 cut(s)	406, 1140
Ama87I	CYCGRG	1 cut(s)	160
AoxI	GGCC	2 cut(s)	450, 761
ApeKI	GCWGC	4 cut(s)	86, 585, 608, 620
ApoI	RAATTY	1 cut(s)	490
ArsI	GACNNNNNNTTYG	2 cut(s)	482, 514
Asp700I	GAANNNNTTC	1 cut(s)	983
Asp718I	GGTACC	1 cut(s)	635
AspLEI	GCGC	5 cut(s)	247, 279, 391, 530, 894
AspS9I	GGNCC	3 cut(s)	282, 450, 761
AsuC2I	CCSGG	2 cut(s)	209, 239
AsuHPI	GGTGA	4 cut(s)	148, 242, 1330, 1357
AsuII	TTCGAA	1 cut(s)	1366
AsuNHI	GCTAGC	1 cut(s)	470
AvaI	CYCGRG	1 cut(s)	160
AvaII	GGWCC	1 cut(s)	282
BanI	GGYRCC	1 cut(s)	635
BanII	GRGCYC	1 cut(s)	1393
BauI	CACGAG	1 cut(s)	411
BbvI	GCAGC	4 cut(s)	98, 597, 620, 632
BccI	CCATC	3 cut(s)	461, 641, 673
BciT130I	CCWGG	2 cut(s)	75, 1395
BciVI	GTATCC	2 cut(s)	915, 1409
BcnI	CCSGG	2 cut(s)	209, 239
BcoDI	GTCTC	3 cut(s)	635, 839, 1426
BcuI	ACTAGT	1 cut(s)	713
BfaI	CTAG	5 cut(s)	227, 471, 495, 714, 1334
BfoI	RGCGCY	1 cut(s)	531
BfuI	GTATCC	2 cut(s)	915, 1409
BglI	GCCNNNNNGGC	1 cut(s)	263
BisI	GCNGC	5 cut(s)	87, 577, 586, 609, 621
BlsI	GCNGC	5 cut(s)	88, 578, 587, 610, 622
Bme1390I	CCNGG	4 cut(s)	75, 209, 239, 1395
Bme18I	GGWCC	1 cut(s)	282
BmeT110I	CYCGRG	1 cut(s)	160
BmgBI	CACGTC	1 cut(s)	957
BmgT120I	GGNCC	3 cut(s)	282, 450, 761
BmiI	GGNNCC	3 cut(s)	451, 637, 1390
BmrFI	CCNGG	4 cut(s)	75, 209, 239, 1395
BmrI	ACTGGG	1 cut(s)	1133
BmsI	GCATC	8 cut(s)	49, 232, 299, 406, 699, 775, 793, 1327
BmtI	GCTAGC	1 cut(s)	474
BmuI	ACTGGG	1 cut(s)	1133
BpmI	CTGGAG	1 cut(s)	113
Bpu14I	TTCGAA	1 cut(s)	1366
BpuEI	CTTGAG	2 cut(s)	496, 565
BpuMI	CCSGG	2 cut(s)	209, 239
BsaI	GGTCTC	1 cut(s)	1426
BsaJI	CCNNGG	5 cut(s)	285, 354, 960, 1149, 1393
BsaXI	ACNNNNNCTCC	2 cut(s)	996, 1026
Bsc4I	CCNNNNNNNGG	3 cut(s)	704, 869, 1189
Bse118I	RCCGGY	1 cut(s)	377
Bse1I	ACTGG	2 cut(s)	1139, 1194
Bse3DI	GCAATG	3 cut(s)	345, 831, 955
BseBI	CCWGG	2 cut(s)	75, 1395
BseDI	CCNNGG	5 cut(s)	285, 354, 960, 1149, 1393
BseGI	GGATG	1 cut(s)	247
BseLI	CCNNNNNNNGG	3 cut(s)	704, 869, 1189
BseMI	GCAATG	3 cut(s)	345, 831, 955
BseMII	CTCAG	4 cut(s)	579, 901, 917, 986
BseNI	ACTGG	2 cut(s)	1139, 1194
BseXI	GCAGC	4 cut(s)	98, 597, 620, 632
Bsh1236I	CGCG	1 cut(s)	894
BshFI	GGCC	2 cut(s)	452, 763
BshNI	GGYRCC	1 cut(s)	635
BsiHKCI	CYCGRG	1 cut(s)	160
BsiSI	CCGG	4 cut(s)	209, 239, 378, 420
BslFI	GGGAC	2 cut(s)	392, 716
BslI	CCNNNNNNNGG	3 cut(s)	704, 869, 1189
BsmAI	GTCTC	3 cut(s)	635, 839, 1426
BsmFI	GGGAC	2 cut(s)	392, 716
BsmI	GAATGC	1 cut(s)	321
BsnI	GGCC	2 cut(s)	452, 763
Bso31I	GGTCTC	1 cut(s)	1426
BsoBI	CYCGRG	1 cut(s)	160
Bsp119I	TTCGAA	1 cut(s)	1366
Bsp1286I	GDGCHC	1 cut(s)	1393
Bsp143I	GATC	4 cut(s)	124, 398, 1145, 1197
BspACI	CCGC	6 cut(s)	91, 375, 537, 576, 588, 623
BspANI	GGCC	2 cut(s)	452, 763
BspCNI	CTCAG	4 cut(s)	578, 900, 918, 987
BspFNI	CGCG	1 cut(s)	894
BspLI	GGNNCC	3 cut(s)	451, 637, 1390
BspOI	GCTAGC	1 cut(s)	474
BspPI	GGATC	2 cut(s)	406, 1140
BspT104I	TTCGAA	1 cut(s)	1366
BspT107I	GGYRCC	1 cut(s)	635
BspTNI	GGTCTC	1 cut(s)	1426
BsrDI	GCAATG	3 cut(s)	345, 831, 955
BsrFI	RCCGGY	1 cut(s)	377
BsrI	ACTGG	2 cut(s)	1139, 1194
BssAI	RCCGGY	1 cut(s)	377
BssECI	CCNNGG	5 cut(s)	285, 354, 960, 1149, 1393
BssMI	GATC	4 cut(s)	124, 398, 1145, 1197
BssSI	CACGAG	1 cut(s)	411
BssT1I	CCWWGG	4 cut(s)	285, 354, 960, 1149
Bst2BI	CACGAG	1 cut(s)	411
Bst2UI	CCWGG	2 cut(s)	75, 1395
Bst4CI	ACNGT	5 cut(s)	757, 778, 882, 1372, 1405
Bst6I	CTCTTC	1 cut(s)	59
BstAPI	GCANNNNNTGC	1 cut(s)	172
BstBI	TTCGAA	1 cut(s)	1366
BstC8I	GCNNGC	6 cut(s)	91, 135, 379, 472, 1269, 1509
BstDEI	CTNAG	7 cut(s)	309, 565, 887, 902, 926, 995, 1515
BstF5I	GGATG	1 cut(s)	247
BstFNI	CGCG	1 cut(s)	894
BstH2I	RGCGCY	1 cut(s)	531
BstHHI	GCGC	5 cut(s)	247, 279, 391, 530, 894
BstKTI	GATC	4 cut(s)	127, 401, 1148, 1200
BstMAI	GTCTC	3 cut(s)	635, 839, 1426
BstMBI	GATC	4 cut(s)	124, 398, 1145, 1197
BstMWI	GCNNNNNNNGC	8 cut(s)	172, 263, 534, 543, 582, 585, 617, 1235
BstNI	CCWGG	2 cut(s)	75, 1395
BstSCI	CCNGG	4 cut(s)	73, 207, 237, 1393
BstUI	CGCG	1 cut(s)	894
BstV1I	GCAGC	4 cut(s)	98, 597, 620, 632
BstX2I	RGATCY	1 cut(s)	398
BstXI	CCANNNNNNTGG	2 cut(s)	460, 522
BstYI	RGATCY	1 cut(s)	398
BsuI	GTATCC	2 cut(s)	915, 1409
BsuRI	GGCC	2 cut(s)	452, 763
BtgZI	GCGATG	1 cut(s)	1080
BtrI	CACGTC	1 cut(s)	957
BtsCI	GGATG	1 cut(s)	247
BtsIMutI	CAGTG	2 cut(s)	300, 1146
Cac8I	GCNNGC	6 cut(s)	91, 135, 379, 472, 1269, 1509
CfoI	GCGC	5 cut(s)	247, 279, 391, 530, 894
Cfr10I	RCCGGY	1 cut(s)	377
Cfr13I	GGNCC	3 cut(s)	282, 450, 761
Csp6I	GTAC	4 cut(s)	636, 856, 1093, 1373
CviAII	CATG	1 cut(s)	317
CviQI	GTAC	4 cut(s)	636, 856, 1093, 1373
DdeI	CTNAG	7 cut(s)	309, 565, 887, 902, 926, 995, 1515
DpnI	GATC	4 cut(s)	126, 400, 1147, 1199
DpnII	GATC	4 cut(s)	124, 398, 1145, 1197
Eam1104I	CTCTTC	1 cut(s)	59
EarI	CTCTTC	1 cut(s)	59
Eco130I	CCWWGG	4 cut(s)	285, 354, 960, 1149
Eco24I	GRGCYC	1 cut(s)	1393
Eco31I	GGTCTC	1 cut(s)	1426
Eco47I	GGWCC	1 cut(s)	282
Eco88I	CYCGRG	1 cut(s)	160
EcoRII	CCWGG	2 cut(s)	73, 1393
EcoT14I	CCWWGG	4 cut(s)	285, 354, 960, 1149
EcoT22I	ATGCAT	1 cut(s)	1114
EcoT38I	GRGCYC	1 cut(s)	1393
ErhI	CCWWGG	4 cut(s)	285, 354, 960, 1149
FaeI	CATG	1 cut(s)	320
FalI	AAGNNNNNCTT	2 cut(s)	458, 490
FaqI	GGGAC	2 cut(s)	392, 716
FatI	CATG	1 cut(s)	316
FauI	CCCGC	1 cut(s)	98
FauNDI	CATATG	1 cut(s)	1495
FblI	GTMKAC	1 cut(s)	1020
Fnu4HI	GCNGC	5 cut(s)	87, 577, 586, 609, 621
FokI	GGATG	1 cut(s)	254
FriOI	GRGCYC	1 cut(s)	1393
Fsp4HI	GCNGC	5 cut(s)	87, 577, 586, 609, 621
FspBI	CTAG	5 cut(s)	227, 471, 495, 714, 1334
GlaI	GCGC	5 cut(s)	246, 278, 390, 529, 893
GluI	GCNGC	5 cut(s)	87, 577, 586, 609, 621
GsuI	CTGGAG	1 cut(s)	113
HaeII	RGCGCY	1 cut(s)	531
HaeIII	GGCC	2 cut(s)	452, 763
HapII	CCGG	4 cut(s)	209, 239, 378, 420
HhaI	GCGC	5 cut(s)	247, 279, 391, 530, 894
Hin1II	CATG	1 cut(s)	320
Hin6I	GCGC	5 cut(s)	245, 277, 389, 528, 892
HinP1I	GCGC	5 cut(s)	245, 277, 389, 528, 892
HincII	GTYRAC	1 cut(s)	235
HindII	GTYRAC	1 cut(s)	235
HindIII	AAGCTT	1 cut(s)	13
HinfI	GANTC	5 cut(s)	96, 222, 816, 1279, 1348
HpaII	CCGG	4 cut(s)	209, 239, 378, 420
HphI	GGTGA	4 cut(s)	148, 242, 1330, 1357
Hpy166II	GTNNAC	4 cut(s)	235, 1021, 1293, 1457
Hpy188I	TCNGA	5 cut(s)	197, 568, 996, 1360, 1471
Hpy188III	TCNNGA	2 cut(s)	413, 800
Hpy8I	GTNNAC	4 cut(s)	235, 1021, 1293, 1457
Hpy99I	CGWCG	1 cut(s)	899
HpyAV	CCTTC	4 cut(s)	440, 1114, 1177, 1542
HpyCH4III	ACNGT	5 cut(s)	757, 778, 882, 1372, 1405
HpyCH4IV	ACGT	2 cut(s)	956, 1218
HpyF10VI	GCNNNNNNNGC	8 cut(s)	172, 263, 534, 543, 582, 585, 617, 1235
HpyF3I	CTNAG	7 cut(s)	309, 565, 887, 902, 926, 995, 1515
HpySE526I	ACGT	2 cut(s)	956, 1218
Hsp92II	CATG	1 cut(s)	320
HspAI	GCGC	5 cut(s)	245, 277, 389, 528, 892
KpnI	GGTACC	1 cut(s)	639
KroI	GCCGGC	1 cut(s)	377
KroNI	GCCGGC	1 cut(s)	379
Kzo9I	GATC	4 cut(s)	124, 398, 1145, 1197
LmnI	GCTCC	2 cut(s)	525, 1388
Lsp1109I	GCAGC	4 cut(s)	98, 597, 620, 632
LweI	GCATC	8 cut(s)	49, 232, 299, 406, 699, 775, 793, 1327
MaeI	CTAG	5 cut(s)	227, 471, 495, 714, 1334
MaeII	ACGT	2 cut(s)	956, 1218
MaeIII	GTNAC	3 cut(s)	297, 1318, 1345
MalI	GATC	4 cut(s)	126, 400, 1147, 1199
MboI	GATC	4 cut(s)	124, 398, 1145, 1197
MboII	GAAGA	4 cut(s)	41, 46, 1050, 1082
MfeI	CAATTG	1 cut(s)	1380
MflI	RGATCY	1 cut(s)	398
MhlI	GDGCHC	1 cut(s)	1393
MlyI	GAGTC	3 cut(s)	90, 231, 1342
MmeI	TCCRAC	1 cut(s)	503
Mph1103I	ATGCAT	1 cut(s)	1114
MroNI	GCCGGC	1 cut(s)	377
MroXI	GAANNNNTTC	1 cut(s)	983
MseI	TTAA	3 cut(s)	141, 204, 1106
MspA1I	CMGCKG	4 cut(s)	588, 623, 1412, 1439
MspI	CCGG	4 cut(s)	209, 239, 378, 420
MspR9I	CCNGG	4 cut(s)	75, 209, 239, 1395
MunI	CAATTG	1 cut(s)	1380
Mva1269I	GAATGC	1 cut(s)	321
MvaI	CCWGG	2 cut(s)	75, 1395
MvnI	CGCG	1 cut(s)	894
MwoI	GCNNNNNNNGC	8 cut(s)	172, 263, 534, 543, 582, 585, 617, 1235
NaeI	GCCGGC	1 cut(s)	379
NciI	CCSGG	2 cut(s)	209, 239
NdeI	CATATG	1 cut(s)	1495
NdeII	GATC	4 cut(s)	124, 398, 1145, 1197
NgoMIV	GCCGGC	1 cut(s)	377
NheI	GCTAGC	1 cut(s)	470
NlaIII	CATG	1 cut(s)	320
NlaIV	GGNNCC	3 cut(s)	451, 637, 1390
NmuCI	GTSAC	3 cut(s)	297, 1318, 1345
NsiI	ATGCAT	1 cut(s)	1114
NspV	TTCGAA	1 cut(s)	1366
PaeR7I	CTCGAG	1 cut(s)	160
PctI	GAATGC	1 cut(s)	321
PdiI	GCCGGC	1 cut(s)	379
PdmI	GAANNNNTTC	1 cut(s)	983
PfeI	GAWTC	2 cut(s)	816, 1279
PkrI	GCNGC	5 cut(s)	88, 578, 587, 610, 622
PleI	GAGTC	3 cut(s)	90, 230, 1342
PpsI	GAGTC	3 cut(s)	90, 230, 1342
PsiI	TTATAA	1 cut(s)	675
Psp6I	CCWGG	2 cut(s)	73, 1393
PspGI	CCWGG	2 cut(s)	73, 1393
PspN4I	GGNNCC	3 cut(s)	451, 637, 1390
PspPI	GGNCC	3 cut(s)	282, 450, 761
PspXI	VCTCGAGB	1 cut(s)	160
PsuI	RGATCY	1 cut(s)	398
PvuII	CAGCTG	2 cut(s)	1412, 1439
RsaI	GTAC	4 cut(s)	637, 857, 1094, 1374
RsaNI	GTAC	4 cut(s)	636, 856, 1093, 1373
SaqAI	TTAA	3 cut(s)	141, 204, 1106
SatI	GCNGC	5 cut(s)	87, 577, 586, 609, 621
Sau3AI	GATC	4 cut(s)	124, 398, 1145, 1197
Sau96I	GGNCC	3 cut(s)	282, 450, 761
SchI	GAGTC	3 cut(s)	90, 231, 1342
ScrFI	CCNGG	4 cut(s)	75, 209, 239, 1395
SduI	GDGCHC	1 cut(s)	1393
SfaNI	GCATC	8 cut(s)	49, 232, 299, 406, 699, 775, 793, 1327
Sfr274I	CTCGAG	1 cut(s)	160
SfuI	TTCGAA	1 cut(s)	1366
SinI	GGWCC	1 cut(s)	282
SlaI	CTCGAG	1 cut(s)	160
SmlI	CTYRAG	3 cut(s)	160, 475, 580
SmoI	CTYRAG	3 cut(s)	160, 475, 580
SpeI	ACTAGT	1 cut(s)	713
SsiI	CCGC	6 cut(s)	91, 375, 537, 576, 588, 623
SspI	AATATT	1 cut(s)	179
SspMI	CTAG	5 cut(s)	227, 471, 495, 714, 1334
StyD4I	CCNGG	4 cut(s)	73, 207, 237, 1393
StyI	CCWWGG	4 cut(s)	285, 354, 960, 1149
TaaI	ACNGT	5 cut(s)	757, 778, 882, 1372, 1405
TaiI	ACGT	2 cut(s)	959, 1221
TaqI	TCGA	4 cut(s)	161, 718, 819, 1366
TaqII	GACCGA	1 cut(s)	695
TatI	WGTACW	3 cut(s)	855, 1092, 1372
TauI	GCSGC	1 cut(s)	579
TfiI	GAWTC	2 cut(s)	816, 1279
Tru1I	TTAA	3 cut(s)	141, 204, 1106
Tru9I	TTAA	3 cut(s)	141, 204, 1106
TscAI	CASTG	2 cut(s)	300, 1146
TseFI	GTSAC	3 cut(s)	297, 1318, 1345
TseI	GCWGC	4 cut(s)	86, 585, 608, 620
Tsp45I	GTSAC	3 cut(s)	297, 1318, 1345
TspDTI	ATGAA	2 cut(s)	380, 1083
TspGWI	ACGGA	1 cut(s)	912
TspRI	CASTG	2 cut(s)	300, 1146
VpaK11BI	GGWCC	1 cut(s)	282
XapI	RAATTY	1 cut(s)	490
XhoI	CTCGAG	1 cut(s)	160
XmiI	GTMKAC	1 cut(s)	1020
XmnI	GAANNNNTTC	1 cut(s)	983
XspI	CTAG	5 cut(s)	227, 471, 495, 714, 1334
Zsp2I	ATGCAT	1 cut(s)	1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.