Rh6CG019400

Amidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000427
Physical Location & Seq
Reverse (-)
1879777 .. 1882011
2235 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG019400.1

Sequence Viewer

Length: 1509 bp
ATGATAATTTCCTCATCGACTGCCATGGCGAAACCAAGCTTCCCTCACATCTTATCCTTATTGCTTCTCATTCTTCTCTTCACATTATCATCTCTGCCAGGCACGTTCGCAGCCGGCAGACTCTCACTCAAAGAAGCCACCATAGACGATCTCCAGCTCGCTTTCAAGCACAACCAACTCACCTCGAGGCAACTTGTCCAATATTACCTTTCCCAAATCCGAAAACTGAACCCGGTTCTCAAAGGAGTCCTAGAAGTCAACCCGGATGCGCTTCACCTTGCCGACAAGGCTGACTACGAGCGCAGGACCAAGGCACCAGTGTCACTACTCTCTAAGTTGCATGGCATTCCTATTCTGGTCAAGGACAACATTGCAACCAAGGATAAGATGAACACCACCGCCGGCTCTTTTGCATTGCTTGGATCTGTCGTGCCTCGTGATGCCGGCGTGGTGGAGAAGTTGAGGAAAGCAGGGGCTATCATTTTGGGAAAGGCTAGCTTGAGCGAGTGGTCACATTTTAGGTCTAATGATGCACCCAATGGTTGGAGCGCCAGAGGCGGTCATGGCTTGAACCCTTACACATTCTCAGACCCTTGCGGCTCAAGCAGCGGTTCAGCAATATCAGTGGCAGCAAATCTGGCAGCGGTGTCATTAGGTACTGAGACAGATGGGTCAATCTTATGTCCATCAGGTTACAACTCAGTTGTGGGCATCAAACCAACAATCGGTCTTACTCGAGCGGGGGTTGTCCCAATTTCTCTAAGACAGGATACTGTTGGGCCAATTTGTAGGACAGTAGCAGATGCTGCTTATGTTCTTGATGCCATAGCAGGCATCGACCACAATGACATTGCAACGATTGAGACATCAAAGTACATTCCCAAAGGTGGTTATGCACAGTTTCTCAGGCGTGACGGACTTAGAGGAAAAAGAATAGGGATATTGAGAGACTTCTATCAATTTGGCAACGACACTTCCTTGGCTCAAACTTTTGAGAAACATCTCAACACTCTGAGCGATGAAGATACTGCATTGTCTGTTGAGTGCAAAATATCCTTAAATGCATACTTGAAGGAGTTGGTGGCTTCCCCAGTGCGATCCTTGGCAGATGTTATAGCCTTCAACAACAAACACCAGAAACTGGAAAAGATCAAGGAGTATGGGCAAGACCTATTTTTAGCAGCTGAAGCAACAAATGGGTTTGGAAAAACAGAGAAGCGGGCATTGTTGAATCTTGCAAGGTGGACAAGAAATGGTCTTGTGAAATTGGTGACAGAGAAGAAGCTAGATGCTGTGGTGACTCCTAACGCAGCTTTTTCAAAGATACTTGCAATTGGGGGAGCCCCAGGTCTAATAGTTCCAGCCGGATACGAGAACAATGGGAGACCAGCTGGTATATGCTTTGGTGGACTTCGGGGTTCAGAGCCAAAGCTAATTGAGATTGCATATGCTTTTGAGCAAGCTACTAAGATTAGAAAGCCTCCTTCATTCAAAGGCTTCAAGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120
Pfam Domains
Protein Families
Amidase

Protein Analysis

502

Amino Acids

53.93

Weight (kDa)

9.47

Isoelectric Point (pI)

32.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Amidase PF01425 65 - 383 8.7e-65 Amidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000427)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34880 AT4G34880
fragaria_vesca FvH4_2g01710 FvH4_2g01720 FvH4_2g01722
malus_domestica MD05G1117000.v1.1 MD05G1117200.v1.1 MD10G1120200.v1.1 MD10G1120300.v1.1 MD10G1120400.v1.1
prunus_persica Prupe.8G161600_v2.0.a1 Prupe.8G161700_v2.0.a1 Prupe.8G161700_v2.0.a1 Prupe.8G161800_v2.0.a1 Prupe.8G161900_v2.0.a1
pyrus_communis pycom05g06760 pycom10g10360 pycom10g10370 pycom17g11700
rosa_chinensis RchiOBHm_Chr6g0244611 RchiOBHm_Chr6g0244621 RchiOBHm_Chr6g0244631 RchiOBHm_Chr6g0244671 RchiOBHm_Chr6g0244701 RchiOBHm_Chr6g0244721 RchiOBHm_Chr6g0244741 RchiOBHm_Chr6g0244751
rosa_laevigata RLG00000015331 RLG00000015332 RLG00000015333 RLG00000015334 RLG00000015336 RLG00000015338 RLG00000015339 RLG00000015340
rosa_multiflora Rmu_co8154324.1_g000001 Rmu_co8259027.1_g000001 Rmu_co8319583.1_g000001 Rmu_sc0002064.1_g000004 Rmu_sc0002522.1_g000021 Rmu_sc0002522.1_g000022 Rmu_sc0002522.1_g000023 Rmu_sc0002522.1_g000026 Rmu_sc0002522.1_g000027 Rmu_sc0006257.1_g000002 Rmu_sc0006635.1_g000001 Rmu_sc0006635.1_g000002 Rmu_sc0007349.1_g000001 Rmu_sc0011292.1_g000009 Rmu_sc0011292.1_g000010 Rmu_sc0039466.1_g000001
rosa_roxburghii Rroxscaffold_7G00215530 Rroxscaffold_7G00215550 Rroxscaffold_7G00215560 Rroxscaffold_7G00215570 Rroxscaffold_7G00215610 Rroxscaffold_7G00215620 Rroxscaffold_7G00215630 Rroxscaffold_7G00215640
rosa_rugosa Rorug05G0509900 Rorug05G0510000 Rorug05G0510000 Rorug05G0510100 Rorug05G0510100 Rorug05G0510200 Rorug05G0510300 Rorug05G0510400
rosa_samantha Rh6BG020500 Rh6BG020600 Rh6BG020700 Rh6BG020900 Rh6BG021000 Rh6BG021100 Rh6BG021200 Rh6CG018800 Rh6CG019000 Rh6CG019100 Rh6CG019200 Rh6CG019300 Rh6CG019400 Rh6CG019600 Rh6CG019800 Rh6DG019900 Rh6DG020100 Rh6DG020200 Rh6DG020400
rosa_wichuraiana Rw0G014670 Rw6G000010 Rw6G000020 Rw6G002100 Rw6G002110 Rw6G002120 Rw6G002140 Rw6G002150 Rw6G002160 Rw6G005110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 670
AbsI CCTCGAGG 1 cut(s) 184
AccB1I GGYRCC 1 cut(s) 313
AccB7I CCANNNNNTGG 2 cut(s) 543, 1141
AccBSI CCGCTC 1 cut(s) 740
AciI CCGC 7 cut(s) 399, 558, 597, 609, 644, 740, 1219
AclWI GGATC 2 cut(s) 430, 1092
AcuI CTGAAG 1 cut(s) 1206
AfaI GTAC 2 cut(s) 658, 875
AfiI CCNNNNNNNGG 4 cut(s) 543, 725, 887, 1141
AgsI TTSAA 8 cut(s) 166, 571, 1072, 1123, 1231, 1320, 1492, 1501
AjnI CCWGG 2 cut(s) 97, 1345
AluBI AGCT 9 cut(s) 39, 157, 498, 1184, 1285, 1313, 1391, 1432, 1463
AluI AGCT 9 cut(s) 39, 157, 498, 1184, 1285, 1313, 1391, 1432, 1463
Alw26I GTCTC 4 cut(s) 656, 857, 942, 1378
AlwI GGATC 2 cut(s) 430, 1092
AlwNI CAGNNNCTG 2 cut(s) 806, 1141
Ama87I CYCGRG 2 cut(s) 184, 735
AoxI GGCC 1 cut(s) 779
ApeKI GCWGC 7 cut(s) 110, 606, 629, 641, 806, 1181, 1310
AspLEI GCGC 3 cut(s) 271, 303, 551
AspS9I GGNCC 2 cut(s) 306, 779
AsuC2I CCSGG 2 cut(s) 233, 263
AsuHPI GGTGA 4 cut(s) 172, 266, 1282, 1309
AsuNHI GCTAGC 1 cut(s) 494
AvaI CYCGRG 2 cut(s) 184, 735
AvaII GGWCC 1 cut(s) 306
BanI GGYRCC 1 cut(s) 313
BanII GRGCYC 1 cut(s) 1345
BauI CACGAG 1 cut(s) 435
BbvI GCAGC 7 cut(s) 122, 618, 641, 653, 793, 1193, 1322
BccI CCATC 2 cut(s) 662, 694
BciT130I CCWGG 2 cut(s) 99, 1347
BciVI GTATCC 2 cut(s) 763, 1361
BcnI CCSGG 2 cut(s) 233, 263
BcoDI GTCTC 4 cut(s) 656, 857, 942, 1378
BfaI CTAG 3 cut(s) 251, 495, 1286
BfoI RGCGCY 1 cut(s) 552
BfuI GTATCC 2 cut(s) 763, 1361
BglI GCCNNNNNGGC 1 cut(s) 287
BisI GCNGC 8 cut(s) 111, 598, 607, 630, 642, 807, 1182, 1311
BlsI GCNGC 8 cut(s) 112, 599, 608, 631, 643, 808, 1183, 1312
Bme1390I CCNGG 4 cut(s) 99, 233, 263, 1347
Bme18I GGWCC 1 cut(s) 306
BmeT110I CYCGRG 2 cut(s) 184, 735
BmgT120I GGNCC 2 cut(s) 306, 779
BmiI GGNNCC 2 cut(s) 315, 1342
BmrFI CCNGG 4 cut(s) 99, 233, 263, 1347
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 8 cut(s) 256, 430, 520, 720, 793, 811, 843, 1279
BmtI GCTAGC 1 cut(s) 498
BmuI ACTGGG 1 cut(s) 1085
BpmI CTGGAG 1 cut(s) 137
BpuEI CTTGAG 2 cut(s) 520, 586
BpuMI CCSGG 2 cut(s) 233, 263
BsaI GGTCTC 1 cut(s) 1378
BsaJI CCNNGG 6 cut(s) 24, 309, 378, 978, 1101, 1345
Bsc4I CCNNNNNNNGG 4 cut(s) 543, 725, 887, 1141
Bse118I RCCGGY 3 cut(s) 113, 401, 443
Bse1I ACTGG 3 cut(s) 317, 1091, 1146
Bse3DI GCAATG 3 cut(s) 369, 413, 849
BseBI CCWGG 2 cut(s) 99, 1347
BseDI CCNNGG 6 cut(s) 24, 309, 378, 978, 1101, 1345
BseGI GGATG 1 cut(s) 271
BseLI CCNNNNNNNGG 4 cut(s) 543, 725, 887, 1141
BseMI GCAATG 3 cut(s) 369, 413, 849
BseMII CTCAG 5 cut(s) 600, 651, 714, 919, 1004
BseNI ACTGG 3 cut(s) 317, 1091, 1146
BseXI GCAGC 7 cut(s) 122, 618, 641, 653, 793, 1193, 1322
BshFI GGCC 1 cut(s) 781
BshNI GGYRCC 1 cut(s) 313
BsiHKCI CYCGRG 2 cut(s) 184, 735
BsiSI CCGG 6 cut(s) 114, 233, 263, 402, 444, 1365
BslFI GGGAC 1 cut(s) 734
BslI CCNNNNNNNGG 4 cut(s) 543, 725, 887, 1141
BsmAI GTCTC 4 cut(s) 656, 857, 942, 1378
BsmFI GGGAC 1 cut(s) 734
BsmI GAATGC 1 cut(s) 345
BsnI GGCC 1 cut(s) 781
Bso31I GGTCTC 1 cut(s) 1378
BsoBI CYCGRG 2 cut(s) 184, 735
Bsp1286I GDGCHC 1 cut(s) 1345
Bsp143I GATC 4 cut(s) 148, 422, 1097, 1149
Bsp19I CCATGG 1 cut(s) 24
BspACI CCGC 7 cut(s) 399, 558, 597, 609, 644, 740, 1219
BspANI GGCC 1 cut(s) 781
BspCNI CTCAG 5 cut(s) 599, 652, 713, 918, 1005
BspLI GGNNCC 2 cut(s) 315, 1342
BspOI GCTAGC 1 cut(s) 498
BspPI GGATC 2 cut(s) 430, 1092
BspT107I GGYRCC 1 cut(s) 313
BspTNI GGTCTC 1 cut(s) 1378
BsrBI CCGCTC 1 cut(s) 740
BsrDI GCAATG 3 cut(s) 369, 413, 849
BsrFI RCCGGY 3 cut(s) 113, 401, 443
BsrI ACTGG 3 cut(s) 317, 1091, 1146
BssAI RCCGGY 3 cut(s) 113, 401, 443
BssECI CCNNGG 6 cut(s) 24, 309, 378, 978, 1101, 1345
BssMI GATC 4 cut(s) 148, 422, 1097, 1149
BssSI CACGAG 1 cut(s) 435
BssT1I CCWWGG 5 cut(s) 24, 309, 378, 978, 1101
Bst2BI CACGAG 1 cut(s) 435
Bst2UI CCWGG 2 cut(s) 99, 1347
Bst4CI ACNGT 3 cut(s) 775, 796, 900
Bst6I CTCTTC 1 cut(s) 83
BstAPI GCANNNNNTGC 1 cut(s) 806
BstC8I GCNNGC 8 cut(s) 115, 159, 403, 445, 496, 832, 1221, 1461
BstDEI CTNAG 9 cut(s) 333, 586, 660, 700, 761, 905, 920, 1013, 1467
BstDSI CCRYGG 1 cut(s) 24
BstF5I GGATG 1 cut(s) 271
BstH2I RGCGCY 1 cut(s) 552
BstHHI GCGC 3 cut(s) 271, 303, 551
BstKTI GATC 4 cut(s) 151, 425, 1100, 1152
BstMAI GTCTC 4 cut(s) 656, 857, 942, 1378
BstMBI GATC 4 cut(s) 148, 422, 1097, 1149
BstMWI GCNNNNNNNGC 8 cut(s) 287, 555, 564, 603, 606, 638, 806, 1187
BstNI CCWGG 2 cut(s) 99, 1347
BstSCI CCNGG 4 cut(s) 97, 231, 261, 1345
BstV1I GCAGC 7 cut(s) 122, 618, 641, 653, 793, 1193, 1322
BstX2I RGATCY 1 cut(s) 422
BstYI RGATCY 1 cut(s) 422
BsuI GTATCC 2 cut(s) 763, 1361
BsuRI GGCC 1 cut(s) 781
BtgI CCRYGG 1 cut(s) 24
BtgZI GCGATG 1 cut(s) 1032
BtsCI GGATG 1 cut(s) 271
BtsIMutI CAGTG 3 cut(s) 324, 630, 1098
Cac8I GCNNGC 8 cut(s) 115, 159, 403, 445, 496, 832, 1221, 1461
CaiI CAGNNNCTG 2 cut(s) 806, 1141
CfoI GCGC 3 cut(s) 271, 303, 551
Cfr10I RCCGGY 3 cut(s) 113, 401, 443
Cfr13I GGNCC 2 cut(s) 306, 779
Csp6I GTAC 2 cut(s) 657, 874
CspCI CAANNNNNGTGG 2 cut(s) 606, 641
CviAII CATG 3 cut(s) 25, 341, 563
CviQI GTAC 2 cut(s) 657, 874
DdeI CTNAG 9 cut(s) 333, 586, 660, 700, 761, 905, 920, 1013, 1467
DpnI GATC 4 cut(s) 150, 424, 1099, 1151
DpnII GATC 4 cut(s) 148, 422, 1097, 1149
DrdI GACNNNNNNGTC 1 cut(s) 670
DseDI GACNNNNNNGTC 1 cut(s) 670
Eam1104I CTCTTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 83
Eco130I CCWWGG 5 cut(s) 24, 309, 378, 978, 1101
Eco24I GRGCYC 1 cut(s) 1345
Eco31I GGTCTC 1 cut(s) 1378
Eco47I GGWCC 1 cut(s) 306
Eco57I CTGAAG 1 cut(s) 1206
Eco88I CYCGRG 2 cut(s) 184, 735
EcoRII CCWGG 2 cut(s) 97, 1345
EcoT14I CCWWGG 5 cut(s) 24, 309, 378, 978, 1101
EcoT22I ATGCAT 1 cut(s) 1066
EcoT38I GRGCYC 1 cut(s) 1345
ErhI CCWWGG 5 cut(s) 24, 309, 378, 978, 1101
FaeI CATG 3 cut(s) 28, 344, 566
FalI AAGNNNNNCTT 2 cut(s) 482, 514
FaqI GGGAC 1 cut(s) 734
FatI CATG 3 cut(s) 24, 340, 562
FauI CCCGC 2 cut(s) 733, 1212
FauNDI CATATG 1 cut(s) 1447
Fnu4HI GCNGC 8 cut(s) 111, 598, 607, 630, 642, 807, 1182, 1311
FokI GGATG 1 cut(s) 278
FriOI GRGCYC 1 cut(s) 1345
Fsp4HI GCNGC 8 cut(s) 111, 598, 607, 630, 642, 807, 1182, 1311
FspBI CTAG 3 cut(s) 251, 495, 1286
GlaI GCGC 3 cut(s) 270, 302, 550
GluI GCNGC 8 cut(s) 111, 598, 607, 630, 642, 807, 1182, 1311
GsuI CTGGAG 1 cut(s) 137
HaeII RGCGCY 1 cut(s) 552
HaeIII GGCC 1 cut(s) 781
HapII CCGG 6 cut(s) 114, 233, 263, 402, 444, 1365
HhaI GCGC 3 cut(s) 271, 303, 551
Hin1II CATG 3 cut(s) 28, 344, 566
Hin6I GCGC 3 cut(s) 269, 301, 549
HinP1I GCGC 3 cut(s) 269, 301, 549
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HindIII AAGCTT 1 cut(s) 37
HinfI GANTC 4 cut(s) 120, 246, 1231, 1300
HpaII CCGG 6 cut(s) 114, 233, 263, 402, 444, 1365
HphI GGTGA 4 cut(s) 172, 266, 1282, 1309
Hpy166II GTNNAC 3 cut(s) 259, 1245, 1409
Hpy188I TCNGA 4 cut(s) 221, 589, 1014, 1423
Hpy188III TCNNGA 2 cut(s) 437, 818
Hpy8I GTNNAC 3 cut(s) 259, 1245, 1409
HpyAV CCTTC 3 cut(s) 1066, 1129, 1494
HpyCH4III ACNGT 3 cut(s) 775, 796, 900
HpyCH4IV ACGT 1 cut(s) 104
HpyF10VI GCNNNNNNNGC 8 cut(s) 287, 555, 564, 603, 606, 638, 806, 1187
HpyF3I CTNAG 9 cut(s) 333, 586, 660, 700, 761, 905, 920, 1013, 1467
HpySE526I ACGT 1 cut(s) 104
Hsp92II CATG 3 cut(s) 28, 344, 566
HspAI GCGC 3 cut(s) 269, 301, 549
KroI GCCGGC 3 cut(s) 113, 401, 443
KroNI GCCGGC 3 cut(s) 115, 403, 445
Kzo9I GATC 4 cut(s) 148, 422, 1097, 1149
LmnI GCTCC 2 cut(s) 546, 1340
Lsp1109I GCAGC 7 cut(s) 122, 618, 641, 653, 793, 1193, 1322
LweI GCATC 8 cut(s) 256, 430, 520, 720, 793, 811, 843, 1279
MaeI CTAG 3 cut(s) 251, 495, 1286
MaeII ACGT 1 cut(s) 104
MaeIII GTNAC 6 cut(s) 321, 510, 692, 911, 1270, 1297
MalI GATC 4 cut(s) 150, 424, 1099, 1151
MbiI CCGCTC 1 cut(s) 740
MboI GATC 4 cut(s) 148, 422, 1097, 1149
MboII GAAGA 4 cut(s) 65, 70, 1034, 1291
MfeI CAATTG 1 cut(s) 1332
MflI RGATCY 1 cut(s) 422
MhlI GDGCHC 1 cut(s) 1345
MluCI AATT 7 cut(s) 6, 753, 783, 959, 1265, 1332, 1434
MlyI GAGTC 3 cut(s) 114, 255, 1294
MmeI TCCRAC 1 cut(s) 524
MnlI CCTC 9 cut(s) 22, 54, 180, 193, 444, 456, 548, 917, 1491
Mph1103I ATGCAT 1 cut(s) 1066
MroNI GCCGGC 3 cut(s) 113, 401, 443
MseI TTAA 1 cut(s) 1058
MspA1I CMGCKG 4 cut(s) 609, 644, 1184, 1391
MspI CCGG 6 cut(s) 114, 233, 263, 402, 444, 1365
MspR9I CCNGG 4 cut(s) 99, 233, 263, 1347
MunI CAATTG 1 cut(s) 1332
Mva1269I GAATGC 1 cut(s) 345
MvaI CCWGG 2 cut(s) 99, 1347
MwoI GCNNNNNNNGC 8 cut(s) 287, 555, 564, 603, 606, 638, 806, 1187
NaeI GCCGGC 3 cut(s) 115, 403, 445
NciI CCSGG 2 cut(s) 233, 263
NcoI CCATGG 1 cut(s) 24
NdeI CATATG 1 cut(s) 1447
NdeII GATC 4 cut(s) 148, 422, 1097, 1149
NgoMIV GCCGGC 3 cut(s) 113, 401, 443
NheI GCTAGC 1 cut(s) 494
NlaIII CATG 3 cut(s) 28, 344, 566
NlaIV GGNNCC 2 cut(s) 315, 1342
NmuCI GTSAC 5 cut(s) 321, 510, 911, 1270, 1297
NsiI ATGCAT 1 cut(s) 1066
PaeR7I CTCGAG 2 cut(s) 184, 735
PctI GAATGC 1 cut(s) 345
PdiI GCCGGC 3 cut(s) 115, 403, 445
PfeI GAWTC 1 cut(s) 1231
PflMI CCANNNNNTGG 2 cut(s) 543, 1141
PkrI GCNGC 8 cut(s) 112, 599, 608, 631, 643, 808, 1183, 1312
PleI GAGTC 3 cut(s) 114, 254, 1294
PpsI GAGTC 3 cut(s) 114, 254, 1294
Psp6I CCWGG 2 cut(s) 97, 1345
PspGI CCWGG 2 cut(s) 97, 1345
PspN4I GGNNCC 2 cut(s) 315, 1342
PspPI GGNCC 2 cut(s) 306, 779
PspXI VCTCGAGB 2 cut(s) 184, 735
PstNI CAGNNNCTG 2 cut(s) 806, 1141
PsuI RGATCY 1 cut(s) 422
PvuII CAGCTG 2 cut(s) 1184, 1391
RsaI GTAC 2 cut(s) 658, 875
RsaNI GTAC 2 cut(s) 657, 874
SaqAI TTAA 1 cut(s) 1058
SatI GCNGC 8 cut(s) 111, 598, 607, 630, 642, 807, 1182, 1311
Sau3AI GATC 4 cut(s) 148, 422, 1097, 1149
Sau96I GGNCC 2 cut(s) 306, 779
SchI GAGTC 3 cut(s) 114, 255, 1294
ScrFI CCNGG 4 cut(s) 99, 233, 263, 1347
SduI GDGCHC 1 cut(s) 1345
SfaNI GCATC 8 cut(s) 256, 430, 520, 720, 793, 811, 843, 1279
Sfr274I CTCGAG 2 cut(s) 184, 735
SinI GGWCC 1 cut(s) 306
SlaI CTCGAG 2 cut(s) 184, 735
SmlI CTYRAG 4 cut(s) 184, 499, 601, 735
SmoI CTYRAG 4 cut(s) 184, 499, 601, 735
Sse9I AATT 7 cut(s) 6, 753, 783, 959, 1265, 1332, 1434
SsiI CCGC 7 cut(s) 399, 558, 597, 609, 644, 740, 1219
SspI AATATT 1 cut(s) 203
SspMI CTAG 3 cut(s) 251, 495, 1286
StyD4I CCNGG 4 cut(s) 97, 231, 261, 1345
StyI CCWWGG 5 cut(s) 24, 309, 378, 978, 1101
TaaI ACNGT 3 cut(s) 775, 796, 900
TaiI ACGT 1 cut(s) 107
TaqI TCGA 4 cut(s) 17, 185, 736, 837
TaqII GACCGA 1 cut(s) 716
TasI AATT 7 cut(s) 6, 753, 783, 959, 1265, 1332, 1434
TatI WGTACW 1 cut(s) 873
TauI GCSGC 1 cut(s) 600
TfiI GAWTC 1 cut(s) 1231
Tru1I TTAA 1 cut(s) 1058
Tru9I TTAA 1 cut(s) 1058
TscAI CASTG 3 cut(s) 324, 630, 1098
TseFI GTSAC 5 cut(s) 321, 510, 911, 1270, 1297
TseI GCWGC 7 cut(s) 110, 606, 629, 641, 806, 1181, 1310
Tsp45I GTSAC 5 cut(s) 321, 510, 911, 1270, 1297
TspDTI ATGAA 3 cut(s) 404, 1035, 1476
TspGWI ACGGA 1 cut(s) 930
TspRI CASTG 3 cut(s) 324, 630, 1098
Van91I CCANNNNNTGG 2 cut(s) 543, 1141
VpaK11BI GGWCC 1 cut(s) 306
XhoI CTCGAG 2 cut(s) 184, 735
XspI CTAG 3 cut(s) 251, 495, 1286
Zsp2I ATGCAT 1 cut(s) 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.