Rorug05G0510300

Amidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000427
Physical Location & Seq
Forward (+)
69432599 .. 69439453
6855 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0510300.1

Sequence Viewer

Length: 1410 bp
ATGGTAAACCCAGAACCCCAAAACCCATACAGACTCGACTACAACGCCAATTTCAGCGACTGGAGAACCAAGCTGGACTCTGTCCTCGACCAGAACCAAGTCAAGTACGTCCTCACCGAACCAAAACCCCCCGAGCCCACAGGCGCAACACCTCAGAACGAAGTCGCCCGCCACCAGAAATGGCTCCTCGACGACTTCACCGCCCGCCACGTCATCCTCGGAGCCCTGCACGAAAGGGTTTACGTGTCTTATCACCGCCACAAAACCGCCAGCTCCCTCCTGGAAGCTCTGACGGCCCACTTCACGACGCCCTCCGTGTCCCGGAGACTGGTCAAGTTCCGGCGCTACATGGAGCACAAGTTGGCCGAGGGAAAATCGGTAAATGAGCACGTGTCGGAGATGGGTTCCATGGCTGCTGGGCTAGAGAGTGAGGGAGTGAAAGTTTCGGAGGAATTGCAGGTTTTGATGCTGATGAATAGCTTGCCGGAGAGGTGGGATGAGACGGTTGGTGGGCTTATAGTGAACATGGATATAGATGGTCCAGATGAAATGGGTCTGGACAAGGTGAGCAAGAGGCTCATAGACTTGGTTTTGAAGAAAGACCAAGAAGAAAATCCACACCTGTATGCTACTATAAAGGTTGCCCGGGAGGGGGATCTTGTGGAGCAGATTGGAAAAGACTTGTATTTTGACCTTGTGGATCATGAAAAAGTCAGAAGTTTTTGTATTCTGAAGGAGACGCCATTTTACCGATTTAAGGAGGAGATTGCTAAAGAGTTTGGCATACCAGTACAATATCAGCGCTACTGGCGGTGGATGAAGCGTCAAAACAATACATATCGCCCAGGCTATCCATTGACGCTTATGGAGGAAACAGTATCTGTTAAAGAGTTGACTGGTAATCGTTCAGAAGTAAACTTGTTCTTAGAAGTAGAGCTTGGGCTGGATTTACACCCTATTGCTCCACCTGACAAGACAAGAGATGTCATTCTTCTCTTCTTTAAACTTTATGATCCAGAAATAGAAGAGCTACGTTATGTTGGAAGGCTATTTGTCAACCTCACTGGTAAACCTACTGAAATCTTATCGAAATTAAATAAGTTCGCTGGCTATGCCCTGGATCAAGAGATCGACCTTTATGAGGAATATAAGTTTCAACCCACGGTCGTGTGTGGTCTCATTGACAAGAATCTTACATTTCGAGCCAGTCAGCTTGAGGATGGAGACATTGTCTGCTTTCAGAAACCAACTCCAGTAGAAATTGGTGTATGTTTCCTGTATCCAAATGTCCAGACTTTTCTGGACTCTGTGCCCATACCTCATTCCTCAAGATCTGAGGCAAACACCTCAGTTGCATTCTATGTAAGAGGAAGAGGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00330 ko00360 ko00380 ko00627 ko00643 ko01120 map00330 map00360 map00380 map00627 map00643 map01120
Pfam Domains
Protein Families
Amidase

Protein Analysis

469

Amino Acids

54.18

Weight (kDa)

6.12

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 28 - 177 3.8e-21 gag-polypeptide of LTR copia-type
USP7_ICP0_bdg PF12436 267 - 436 2.1e-38 ICP0-binding domain of Ubiquitin-specific protease 7
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000427)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G34880 AT4G34880
fragaria_vesca FvH4_2g01710 FvH4_2g01720 FvH4_2g01722
malus_domestica MD05G1117000.v1.1 MD05G1117200.v1.1 MD10G1120200.v1.1 MD10G1120300.v1.1 MD10G1120400.v1.1
prunus_persica Prupe.8G161600_v2.0.a1 Prupe.8G161700_v2.0.a1 Prupe.8G161700_v2.0.a1 Prupe.8G161800_v2.0.a1 Prupe.8G161900_v2.0.a1
pyrus_communis pycom05g06760 pycom10g10360 pycom10g10370 pycom17g11700
rosa_chinensis RchiOBHm_Chr6g0244611 RchiOBHm_Chr6g0244621 RchiOBHm_Chr6g0244631 RchiOBHm_Chr6g0244671 RchiOBHm_Chr6g0244701 RchiOBHm_Chr6g0244721 RchiOBHm_Chr6g0244741 RchiOBHm_Chr6g0244751
rosa_laevigata RLG00000015331 RLG00000015332 RLG00000015333 RLG00000015334 RLG00000015336 RLG00000015338 RLG00000015339 RLG00000015340
rosa_multiflora Rmu_co8154324.1_g000001 Rmu_co8259027.1_g000001 Rmu_co8319583.1_g000001 Rmu_sc0002064.1_g000004 Rmu_sc0002522.1_g000021 Rmu_sc0002522.1_g000022 Rmu_sc0002522.1_g000023 Rmu_sc0002522.1_g000026 Rmu_sc0002522.1_g000027 Rmu_sc0006257.1_g000002 Rmu_sc0006635.1_g000001 Rmu_sc0006635.1_g000002 Rmu_sc0007349.1_g000001 Rmu_sc0011292.1_g000009 Rmu_sc0011292.1_g000010 Rmu_sc0039466.1_g000001
rosa_roxburghii Rroxscaffold_7G00215530 Rroxscaffold_7G00215550 Rroxscaffold_7G00215560 Rroxscaffold_7G00215570 Rroxscaffold_7G00215610 Rroxscaffold_7G00215620 Rroxscaffold_7G00215630 Rroxscaffold_7G00215640
rosa_rugosa Rorug05G0509900 Rorug05G0510000 Rorug05G0510000 Rorug05G0510100 Rorug05G0510100 Rorug05G0510200 Rorug05G0510300 Rorug05G0510400
rosa_samantha Rh6BG020500 Rh6BG020600 Rh6BG020700 Rh6BG020900 Rh6BG021000 Rh6BG021100 Rh6BG021200 Rh6CG018800 Rh6CG019000 Rh6CG019100 Rh6CG019200 Rh6CG019300 Rh6CG019400 Rh6CG019600 Rh6CG019800 Rh6DG019900 Rh6DG020100 Rh6DG020200 Rh6DG020400
rosa_wichuraiana Rw0G014670 Rw6G000010 Rw6G000020 Rw6G002100 Rw6G002110 Rw6G002120 Rw6G002140 Rw6G002150 Rw6G002160 Rw6G005110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 448
AciI CCGC 6 cut(s) 169, 201, 205, 256, 267, 811
AclWI GGATC 4 cut(s) 663, 708, 1007, 1128
AcoI YGGCCR 1 cut(s) 363
AcuI CTGAAG 1 cut(s) 752
AcvI CACGTG 1 cut(s) 391
AcyI GRCGYC 2 cut(s) 308, 740
AfaI GTAC 2 cut(s) 107, 792
AfeI AGCGCT 1 cut(s) 803
AfiI CCNNNNNNNGG 6 cut(s) 321, 328, 651, 652, 757, 1141
AflIII ACRYGT 2 cut(s) 243, 390
AgsI TTSAA 2 cut(s) 595, 1157
AjiI CACGTC 1 cut(s) 211
AjnI CCWGG 3 cut(s) 279, 844, 1116
AjuI GAANNNNNNNTTGG 2 cut(s) 921, 953
AleI CACNNNNGTG 1 cut(s) 1166
AluBI AGCT 7 cut(s) 73, 273, 287, 480, 937, 1030, 1213
AluI AGCT 7 cut(s) 73, 273, 287, 480, 937, 1030, 1213
Alw21I GWGCWC 2 cut(s) 357, 390
Alw26I GTCTC 5 cut(s) 319, 494, 731, 1181, 1218
AlwI GGATC 4 cut(s) 663, 708, 1007, 1128
AlwNI CAGNNNCTG 2 cut(s) 60, 881
Ama87I CYCGRG 2 cut(s) 131, 645
Aor51HI AGCGCT 1 cut(s) 803
AoxI GGCC 2 cut(s) 294, 363
ApeKI GCWGC 1 cut(s) 413
ArsI GACNNNNNNTTYG 2 cut(s) 671, 703
AspLEI GCGC 3 cut(s) 146, 345, 804
AspS9I GGNCC 2 cut(s) 295, 539
AsuC2I CCSGG 3 cut(s) 322, 646, 647
AsuHPI GGTGA 4 cut(s) 106, 190, 245, 577
AvaI CYCGRG 2 cut(s) 131, 645
AvaII GGWCC 1 cut(s) 539
BaeGI GKGCMC 1 cut(s) 1314
BanII GRGCYC 2 cut(s) 138, 226
BbrPI CACGTG 1 cut(s) 391
Bbv12I GWGCWC 2 cut(s) 357, 390
BbvI GCAGC 1 cut(s) 400
BccI CCATC 3 cut(s) 394, 530, 1214
BceAI ACGGC 1 cut(s) 309
BciT130I CCWGG 3 cut(s) 281, 846, 1118
BciVI GTATCC 1 cut(s) 1290
BcnI CCSGG 3 cut(s) 322, 646, 647
BcoDI GTCTC 5 cut(s) 319, 494, 731, 1181, 1218
BfaI CTAG 1 cut(s) 422
BfoI RGCGCY 2 cut(s) 346, 805
BfuAI ACCTGC 1 cut(s) 448
BfuI GTATCC 1 cut(s) 1290
BglII AGATCT 1 cut(s) 1331
BisI GCNGC 1 cut(s) 414
BlsI GCNGC 1 cut(s) 415
Bme1390I CCNGG 6 cut(s) 281, 322, 646, 647, 846, 1118
Bme18I GGWCC 1 cut(s) 539
BmeT110I CYCGRG 2 cut(s) 131, 645
BmgBI CACGTC 1 cut(s) 211
BmgT120I GGNCC 2 cut(s) 295, 539
BmiI GGNNCC 3 cut(s) 185, 223, 406
BmrFI CCNGG 6 cut(s) 281, 322, 646, 647, 846, 1118
BmsI GCATC 1 cut(s) 456
BpmI CTGGAG 2 cut(s) 82, 1236
BpuEI CTTGAG 2 cut(s) 1235, 1312
BpuMI CCSGG 3 cut(s) 322, 646, 647
BsaAI YACGTR 2 cut(s) 244, 391
BsaHI GRCGYC 2 cut(s) 308, 740
BsaI GGTCTC 1 cut(s) 1181
BsaJI CCNNGG 7 cut(s) 217, 366, 408, 645, 844, 1116, 1161
BsaXI ACNNNNNCTCC 6 cut(s) 344, 374, 426, 456, 1215, 1245
Bsc4I CCNNNNNNNGG 6 cut(s) 321, 328, 651, 652, 757, 1141
Bse1I ACTGG 8 cut(s) 65, 333, 788, 812, 901, 1069, 1206, 1253
BseBI CCWGG 3 cut(s) 281, 846, 1118
BseDI CCNNGG 7 cut(s) 217, 366, 408, 645, 844, 1116, 1161
BseGI GGATG 4 cut(s) 213, 502, 822, 1225
BseLI CCNNNNNNNGG 6 cut(s) 321, 328, 651, 652, 757, 1141
BseMII CTCAG 3 cut(s) 167, 1326, 1362
BseNI ACTGG 8 cut(s) 65, 333, 788, 812, 901, 1069, 1206, 1253
BseRI GAGGAG 2 cut(s) 176, 776
BseSI GKGCMC 1 cut(s) 1314
BseXI GCAGC 1 cut(s) 400
BseYI CCCAGC 1 cut(s) 416
BsgI GTGCAG 1 cut(s) 212
Bsh1285I CGRYCG 1 cut(s) 1167
BshFI GGCC 2 cut(s) 296, 365
BsiEI CGRYCG 1 cut(s) 1167
BsiHKAI GWGCWC 2 cut(s) 357, 390
BsiHKCI CYCGRG 2 cut(s) 131, 645
BsiSI CCGG 4 cut(s) 322, 340, 485, 646
BslFI GGGAC 1 cut(s) 304
BslI CCNNNNNNNGG 6 cut(s) 321, 328, 651, 652, 757, 1141
BsmAI GTCTC 5 cut(s) 319, 494, 731, 1181, 1218
BsmBI CGTCTC 2 cut(s) 494, 731
BsmFI GGGAC 1 cut(s) 304
BsmI GAATGC 1 cut(s) 1355
BsnI GGCC 2 cut(s) 296, 365
Bso31I GGTCTC 1 cut(s) 1181
BsoBI CYCGRG 2 cut(s) 131, 645
Bsp1286I GDGCHC 5 cut(s) 138, 226, 357, 390, 1314
Bsp143I GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
Bsp19I CCATGG 1 cut(s) 408
BspACI CCGC 6 cut(s) 169, 201, 205, 256, 267, 811
BspANI GGCC 2 cut(s) 296, 365
BspCNI CTCAG 3 cut(s) 166, 1327, 1361
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 3 cut(s) 185, 223, 406
BspMI ACCTGC 1 cut(s) 448
BspPI GGATC 4 cut(s) 663, 708, 1007, 1128
BspQI GCTCTTC 1 cut(s) 1020
BspTNI GGTCTC 1 cut(s) 1181
BsrI ACTGG 8 cut(s) 65, 333, 788, 812, 901, 1069, 1206, 1253
BssECI CCNNGG 7 cut(s) 217, 366, 408, 645, 844, 1116, 1161
BssMI GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
BssNI GRCGYC 2 cut(s) 308, 740
BssT1I CCWWGG 1 cut(s) 408
Bst2UI CCWGG 3 cut(s) 281, 846, 1118
Bst4CI ACNGT 3 cut(s) 505, 877, 1165
Bst6I CTCTTC 6 cut(s) 1001, 1020, 1366, 1381, 1387, 1393
BstACI GRCGYC 2 cut(s) 308, 740
BstBAI YACGTR 2 cut(s) 244, 391
BstC8I GCNNGC 5 cut(s) 169, 205, 271, 482, 1108
BstDEI CTNAG 4 cut(s) 153, 925, 1335, 1348
BstDSI CCRYGG 2 cut(s) 408, 1161
BstENI CCTNNNNNAGG 1 cut(s) 1139
BstF5I GGATG 4 cut(s) 213, 502, 822, 1225
BstH2I RGCGCY 2 cut(s) 346, 805
BstHHI GCGC 3 cut(s) 146, 345, 804
BstKTI GATC 6 cut(s) 658, 703, 1015, 1123, 1131, 1334
BstMAI GTCTC 5 cut(s) 319, 494, 731, 1181, 1218
BstMBI GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
BstMCI CGRYCG 1 cut(s) 1167
BstMWI GCNNNNNNNGC 3 cut(s) 293, 808, 1112
BstNI CCWGG 3 cut(s) 281, 846, 1118
BstSCI CCNGG 6 cut(s) 279, 320, 644, 645, 844, 1116
BstSLI GKGCMC 1 cut(s) 1314
BstV1I GCAGC 1 cut(s) 400
BstX2I RGATCY 2 cut(s) 655, 1331
BstYI RGATCY 2 cut(s) 655, 1331
BsuI GTATCC 1 cut(s) 1290
BsuRI GGCC 2 cut(s) 296, 365
BtgI CCRYGG 2 cut(s) 408, 1161
BtrI CACGTC 1 cut(s) 211
BtsCI GGATG 4 cut(s) 213, 502, 822, 1225
BtsIMutI CAGTG 1 cut(s) 1062
BveI ACCTGC 1 cut(s) 448
Cac8I GCNNGC 5 cut(s) 169, 205, 271, 482, 1108
CaiI CAGNNNCTG 2 cut(s) 60, 881
CciI TCATGA 1 cut(s) 703
CfoI GCGC 3 cut(s) 146, 345, 804
Cfr13I GGNCC 2 cut(s) 295, 539
Cfr9I CCCGGG 1 cut(s) 645
CseI GACGC 4 cut(s) 316, 748, 812, 868
Csp6I GTAC 2 cut(s) 106, 791
CviAII CATG 4 cut(s) 349, 409, 526, 704
CviQI GTAC 2 cut(s) 106, 791
DdeI CTNAG 4 cut(s) 153, 925, 1335, 1348
DpnI GATC 6 cut(s) 657, 702, 1014, 1122, 1130, 1333
DpnII GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
DraI TTTAAA 1 cut(s) 1003
EaeI YGGCCR 1 cut(s) 363
Eam1104I CTCTTC 6 cut(s) 1001, 1020, 1366, 1381, 1387, 1393
EarI CTCTTC 6 cut(s) 1001, 1020, 1366, 1381, 1387, 1393
Eco130I CCWWGG 1 cut(s) 408
Eco24I GRGCYC 2 cut(s) 138, 226
Eco31I GGTCTC 1 cut(s) 1181
Eco47I GGWCC 1 cut(s) 539
Eco47III AGCGCT 1 cut(s) 803
Eco57I CTGAAG 1 cut(s) 752
Eco72I CACGTG 1 cut(s) 391
Eco88I CYCGRG 2 cut(s) 131, 645
EcoNI CCTNNNNNAGG 1 cut(s) 1139
EcoRII CCWGG 3 cut(s) 279, 844, 1116
EcoT14I CCWWGG 1 cut(s) 408
EcoT38I GRGCYC 2 cut(s) 138, 226
ErhI CCWWGG 1 cut(s) 408
Esp3I CGTCTC 2 cut(s) 494, 731
FaeI CATG 4 cut(s) 352, 412, 529, 707
FalI AAGNNNNNCTT 2 cut(s) 921, 953
FaqI GGGAC 1 cut(s) 304
FatI CATG 4 cut(s) 348, 408, 525, 703
FauI CCCGC 2 cut(s) 176, 212
Fnu4HI GCNGC 1 cut(s) 414
FokI GGATG 4 cut(s) 200, 509, 829, 1232
FriOI GRGCYC 2 cut(s) 138, 226
Fsp4HI GCNGC 1 cut(s) 414
FspBI CTAG 1 cut(s) 422
GlaI GCGC 3 cut(s) 145, 344, 803
GluI GCNGC 1 cut(s) 414
GsaI CCCAGC 1 cut(s) 420
GsuI CTGGAG 2 cut(s) 82, 1236
HaeII RGCGCY 2 cut(s) 346, 805
HaeIII GGCC 2 cut(s) 296, 365
HapII CCGG 4 cut(s) 322, 340, 485, 646
HgaI GACGC 4 cut(s) 316, 748, 812, 868
HhaI GCGC 3 cut(s) 146, 345, 804
Hin1I GRCGYC 2 cut(s) 308, 740
Hin1II CATG 4 cut(s) 352, 412, 529, 707
Hin6I GCGC 3 cut(s) 144, 343, 802
HinP1I GCGC 3 cut(s) 144, 343, 802
HincII GTYRAC 2 cut(s) 894, 1057
HindII GTYRAC 2 cut(s) 894, 1057
HinfI GANTC 4 cut(s) 33, 77, 1189, 1304
HpaII CCGG 4 cut(s) 322, 340, 485, 646
HphI GGTGA 4 cut(s) 106, 190, 245, 577
Hpy166II GTNNAC 7 cut(s) 7, 241, 523, 894, 916, 1057, 1070
Hpy188III TCNNGA 9 cut(s) 304, 542, 557, 704, 1016, 1124, 1291, 1301, 1329
Hpy8I GTNNAC 7 cut(s) 7, 241, 523, 894, 916, 1057, 1070
Hpy99I CGWCG 2 cut(s) 194, 310
HpyAV CCTTC 2 cut(s) 727, 1038
HpyCH4III ACNGT 3 cut(s) 505, 877, 1165
HpyCH4IV ACGT 5 cut(s) 108, 210, 243, 390, 1033
HpyCH4V TGCA 3 cut(s) 229, 457, 1355
HpyF10VI GCNNNNNNNGC 3 cut(s) 293, 808, 1112
HpyF3I CTNAG 4 cut(s) 153, 925, 1335, 1348
HpySE526I ACGT 5 cut(s) 108, 210, 243, 390, 1033
Hsp92I GRCGYC 2 cut(s) 308, 740
Hsp92II CATG 4 cut(s) 352, 412, 529, 707
HspAI GCGC 3 cut(s) 144, 343, 802
Kzo9I GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
LguI GCTCTTC 1 cut(s) 1020
LmnI GCTCC 6 cut(s) 189, 221, 278, 352, 664, 967
Lsp1109I GCAGC 1 cut(s) 400
LweI GCATC 1 cut(s) 456
MaeI CTAG 1 cut(s) 422
MaeII ACGT 5 cut(s) 108, 210, 243, 390, 1033
MalI GATC 6 cut(s) 657, 702, 1014, 1122, 1130, 1333
MboI GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
MflI RGATCY 2 cut(s) 655, 1331
MhlI GDGCHC 5 cut(s) 138, 226, 357, 390, 1314
MluCI AATT 4 cut(s) 49, 452, 1091, 1260
MlyI GAGTC 3 cut(s) 27, 71, 1298
MmeI TCCRAC 2 cut(s) 375, 1021
MseI TTAA 4 cut(s) 756, 885, 1002, 1094
MslI CAYNNNNRTG 2 cut(s) 624, 1166
MspI CCGG 4 cut(s) 322, 340, 485, 646
MspR9I CCNGG 6 cut(s) 281, 322, 646, 647, 846, 1118
Mva1269I GAATGC 1 cut(s) 1355
MvaI CCWGG 3 cut(s) 281, 846, 1118
MwoI GCNNNNNNNGC 3 cut(s) 293, 808, 1112
NciI CCSGG 3 cut(s) 322, 646, 647
NcoI CCATGG 1 cut(s) 408
NdeII GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
NlaIII CATG 4 cut(s) 352, 412, 529, 707
NlaIV GGNNCC 3 cut(s) 185, 223, 406
NmeAIII GCCGAG 1 cut(s) 391
OliI CACNNNNGTG 1 cut(s) 1166
PagI TCATGA 1 cut(s) 703
PciSI GCTCTTC 1 cut(s) 1020
PcsI WCGNNNNNNNCGW 1 cut(s) 114
PctI GAATGC 1 cut(s) 1355
PfeI GAWTC 1 cut(s) 1189
PflFI GACNNNGTC 2 cut(s) 80, 1229
PfoI TCCNGGA 2 cut(s) 279, 320
PkrI GCNGC 1 cut(s) 415
PleI GAGTC 3 cut(s) 27, 71, 1298
PmaCI CACGTG 1 cut(s) 391
PmlI CACGTG 1 cut(s) 391
PpsI GAGTC 3 cut(s) 27, 71, 1298
Ppu21I YACGTR 2 cut(s) 244, 391
Psp6I CCWGG 3 cut(s) 279, 844, 1116
PspCI CACGTG 1 cut(s) 391
PspFI CCCAGC 1 cut(s) 416
PspGI CCWGG 3 cut(s) 279, 844, 1116
PspN4I GGNNCC 3 cut(s) 185, 223, 406
PspPI GGNCC 2 cut(s) 295, 539
PstNI CAGNNNCTG 2 cut(s) 60, 881
PsuI RGATCY 2 cut(s) 655, 1331
PsyI GACNNNGTC 2 cut(s) 80, 1229
RsaI GTAC 2 cut(s) 107, 792
RsaNI GTAC 2 cut(s) 106, 791
RseI CAYNNNNRTG 2 cut(s) 624, 1166
SapI GCTCTTC 1 cut(s) 1020
SaqAI TTAA 4 cut(s) 756, 885, 1002, 1094
SatI GCNGC 1 cut(s) 414
Sau3AI GATC 6 cut(s) 655, 700, 1012, 1120, 1128, 1331
Sau96I GGNCC 2 cut(s) 295, 539
SchI GAGTC 3 cut(s) 27, 71, 1298
ScrFI CCNGG 6 cut(s) 281, 322, 646, 647, 846, 1118
SduI GDGCHC 5 cut(s) 138, 226, 357, 390, 1314
SfaNI GCATC 1 cut(s) 456
SinI GGWCC 1 cut(s) 539
SmaI CCCGGG 1 cut(s) 647
SmiMI CAYNNNNRTG 2 cut(s) 624, 1166
SmlI CTYRAG 2 cut(s) 1214, 1327
SmoI CTYRAG 2 cut(s) 1214, 1327
Sse9I AATT 4 cut(s) 49, 452, 1091, 1260
SsiI CCGC 6 cut(s) 169, 201, 205, 256, 267, 811
SspMI CTAG 1 cut(s) 422
StyD4I CCNGG 6 cut(s) 279, 320, 644, 645, 844, 1116
StyI CCWWGG 1 cut(s) 408
TaaI ACNGT 3 cut(s) 505, 877, 1165
TaiI ACGT 5 cut(s) 111, 213, 246, 393, 1036
TaqI TCGA 6 cut(s) 36, 87, 189, 1088, 1131, 1201
TasI AATT 4 cut(s) 49, 452, 1091, 1260
TatI WGTACW 1 cut(s) 790
TfiI GAWTC 1 cut(s) 1189
Tru1I TTAA 4 cut(s) 756, 885, 1002, 1094
Tru9I TTAA 4 cut(s) 756, 885, 1002, 1094
TscAI CASTG 1 cut(s) 1069
TseI GCWGC 1 cut(s) 413
TspDTI ATGAA 4 cut(s) 488, 561, 720, 833
TspGWI ACGGA 1 cut(s) 304
TspMI CCCGGG 1 cut(s) 645
TspRI CASTG 1 cut(s) 1069
Tth111I GACNNNGTC 2 cut(s) 80, 1229
VpaK11BI GGWCC 1 cut(s) 539
XagI CCTNNNNNAGG 1 cut(s) 1139
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XmaI CCCGGG 1 cut(s) 645
XspI CTAG 1 cut(s) 422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.