Rorug02G0354300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000520
Physical Location & Seq
Reverse (-)
44567647 .. 44571058
3412 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0354300.1

Sequence Viewer

Length: 1449 bp
ATGAAGCGCCCTCGAAGCCTTGCACAACCGAGCAACAACTTGTACGGCCTTTTTCGTTCCTTCCGAGAAAACAACCCGATTGATCACATCCCCTTACCGAACCTCCCCAGCTCTAACTTCGTTCATGGAAGTCGTCGACATCGGAAAAACGCCGCGTCCGACGCAGCTCTCACTTCCTTCATCGAAGTCGACCCGAGCTCTCACTTCCCCATACAGAACCTCCCGTTCGGAGTGTTCAAGCCAAAACCGGCTTCAAAGGCTCGACCGGGCGTGGCCATCGGCGATTATGTGTTGGACTTGTCAGCAATCGCCGCCGCCGGTCTCTTCAACGGTCCGATCCTCAGAAACTCCGATTGCTTTTTTCAGCCTAATTTGAACAAGTTCTTGGCCTTGGGACGACCTGCTTGGAAGGAAGCACGTGCTACACTTCAGAAGCTACTTTCATCTACTGAGCCAACATTGCGTGACAATCAAAGTTTAAAGCAGGAATCACTTATTCCATTGAGCGAGGTGGAAATGCTGCTTCCTGTGGCGATTGGGGACTTCACAGACTTCTATTCATCGATGGATCACGTACACGACTGCAGGGCCAAGATTAGTTATAAGGCAGGTCAGGCAATTCCACTGAACTGGTTGGACCTACCAATTGCATATCATGGACGAGCTTCGTCGATTGTTATCTCTGGAACTGACATTACTCGACCCAGGTCAATCAGAGAGGTGTCTCTTGAGACATTTTTACGTCCAAGAAAACCTCCAGGCGGTTTGCTATATTTTGGTCCTGCAACGAAACTAGATTTTGAGCTTAAAATGGCTGCTGTAGTTGGTCCTGGAAATGAATTAGGGAATCCGGTGGATGTGAATGAGGCAGCAGATCACATTTTTGGACTTGTCTTGATGAATGGCTGGATTGCTAGAGATATCCAGGCAAAGGAATTTATTCCCAGTGTGCCTTTCCTTGGAAAAAGTTTTGGAACTACAATATCCCCTTGGATAGTGACACTTGACGCTCTAGAACCATTTTCCTGTGATCCTCCCAAAAAGCACCCCCATCTATTGCCCTATGTCGCTGAAAATATCTCCGAAAGCTATGACATAACATTAGAGGTTCGAATTAAACCAGCTGGAGAGAGGCGCTCATCTGTGGTCACAAAGAGTAATTTCAACCACTTAATTTGGACATTGCCTCAGCAGCTAGCACACCTTACTATCAATGGTTGCAACTTAAGGCCTGGAGATCTCTTTGGAACTGGGACCATCAGTGGACCTGAACCAGAATCTTATGGAAGCTTGCTAGAGCTGACATGGGATAAGCCGTTGTCATTAAACGGCGTTACTCGTGAATTTCTTGAAGATGGAGATGAAGTCATCATTACTGGTTTTAGCAAGGGAAATGGCTACAAAGTTGGGTTCGGGAAATGCTCCGGAAAGATTTTACCCCCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

482

Amino Acids

52.93

Weight (kDa)

8.17

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAA_hydrolase_N PF09298 72 - 176 3.7e-35 Fumarylacetoacetase N-terminal
FAA_hydrolase PF01557 184 - 459 8.7e-33 Fumarylacetoacetate (FAA) hydrolase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000520)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g08811 FvH4_2g13461
malus_domestica MD02G1305800.v1.1 MD02G1311300.v1.1 MD02G1311400.v1.1 MD03G1254800.v1.1 MD04G1165700.v1.1 MD05G1031200.v1.1 MD06G1150500.v1.1 MD06G1150600.v1.1 MD06G1150900.v1.1 MD06G1151100.v1.1 MD06G1151200.v1.1 MD07G1018900.v1.1 MD07G1019400.v1.1 MD07G1019500.v1.1 MD07G1023400.v1.1 MD08G1234000.v1.1 MD08G1234200.v1.1 MD13G1233200.v1.1 MD17G1268200.v1.1
pyrus_communis pycom02g25630 pycom02g26130 pycom05g02240 pycom05g02610 pycom06g13890 pycom06g13900 pycom07g01500 pycom07g01510 pycom07g01520 pycom07g01530 pycom07g01540 pycom08g17170 pycom08g17230 pycom08g20290 pycom13g20570
rosa_chinensis RchiOBHm_Chr2g0139011 RchiOBHm_Chr3g0492121
rosa_laevigata RLG00000002413 RLG00000019773 RLG00000019781 RLG00000022823 RLG00000024839 RLG00000027358
rosa_multiflora Rmu_sc0000379.1_g000005 Rmu_sc0002029.1_g000002 Rmu_sc0009440.1_g000007
rosa_roxburghii Rroxscaffold_2G00105770 Rroxscaffold_2G00105790 Rroxscaffold_2G00105890 Rroxscaffold_3G00241430 Rroxscaffold_4G00290390 Rroxscaffold_4G00290420 Rroxscaffold_7G00207210
rosa_rugosa Rorug02G0354100 Rorug02G0354200 Rorug02G0354300 Rorug02G0354400 Rorug02G0354500 Rorug03G0323900 Rorug07G0173300 Rorug07G0173400
rosa_samantha Rh1AG336500 Rh2AG403700 Rh2AG403900 Rh2BG414300 Rh2BG414400 Rh2BG474400 Rh2CG389800 Rh2CG390000 Rh2DG423900 Rh2DG424000 Rh2DG483000 Rh3CG333300 Rh3DG335400 Rh6AG108100 Rh6BG103000 Rh6BG103400 Rh6CG096600 Rh6DG090300 Rh7AG315900 Rh7BG306200 Rh7DG314100 Rh7DG314600
rosa_wichuraiana Rw2G032870 Rw7G026680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 603
Acc36I ACCTGC 2 cut(s) 409, 599
AccI GTMKAC 2 cut(s) 136, 189
AccII CGCG 1 cut(s) 155
AccIII TCCGGA 1 cut(s) 1424
AciI CCGC 4 cut(s) 153, 312, 315, 762
AclWI GGATC 3 cut(s) 331, 576, 1025
AcoI YGGCCR 1 cut(s) 273
AcsI RAATTY 2 cut(s) 935, 1343
AcuI CTGAAG 1 cut(s) 413
AcvI CACGTG 1 cut(s) 419
AfaI GTAC 2 cut(s) 44, 576
AfiI CCNNNNNNNGG 3 cut(s) 761, 931, 959
AflII CTTAAG 1 cut(s) 1225
AgsI TTSAA 6 cut(s) 238, 255, 328, 376, 1165, 1352
AjnI CCWGG 5 cut(s) 704, 757, 829, 924, 1231
AjuI GAANNNNNNNTTGG 4 cut(s) 235, 267, 368, 400
Alw21I GWGCWC 1 cut(s) 200
Alw26I GTCTC 3 cut(s) 326, 725, 729
AlwI GGATC 3 cut(s) 331, 576, 1025
Ama87I CYCGRG 1 cut(s) 193
Aor13HI TCCGGA 1 cut(s) 1424
AoxI GGCC 5 cut(s) 46, 273, 387, 588, 1229
ApeKI GCWGC 5 cut(s) 164, 520, 815, 869, 1192
ApoI RAATTY 2 cut(s) 935, 1343
Asp700I GAANNNNTTC 2 cut(s) 380, 939
AspLEI GCGC 2 cut(s) 9, 1137
AspS9I GGNCC 7 cut(s) 332, 588, 637, 779, 827, 1254, 1265
AsuC2I CCSGG 1 cut(s) 267
AsuII TTCGAA 1 cut(s) 1111
AsuNHI GCTAGC 1 cut(s) 1195
AvaI CYCGRG 1 cut(s) 193
AvaII GGWCC 6 cut(s) 332, 637, 779, 827, 1254, 1265
BalI TGGCCA 1 cut(s) 275
BanII GRGCYC 1 cut(s) 200
BauI CACGAG 1 cut(s) 1338
BbrPI CACGTG 1 cut(s) 419
Bbv12I GWGCWC 1 cut(s) 200
BbvCI CCTCAGC 1 cut(s) 1188
BbvI GCAGC 5 cut(s) 176, 507, 802, 881, 1204
BccI CCATC 5 cut(s) 284, 559, 1059, 1265, 1349
BceAI ACGGC 3 cut(s) 61, 1300, 1345
BciT130I CCWGG 5 cut(s) 706, 759, 831, 926, 1233
BclI TGATCA 1 cut(s) 82
BcnI CCSGG 1 cut(s) 267
BcoDI GTCTC 3 cut(s) 326, 725, 729
BfaI CTAG 5 cut(s) 794, 915, 1013, 1196, 1295
BfmI CTRYAG 2 cut(s) 583, 819
BfoI RGCGCY 2 cut(s) 10, 1138
BfrI CTTAAG 1 cut(s) 1225
BfuAI ACCTGC 2 cut(s) 409, 599
BglII AGATCT 1 cut(s) 1237
BisI GCNGC 8 cut(s) 153, 165, 312, 315, 521, 816, 870, 1193
BlsI GCNGC 8 cut(s) 154, 166, 313, 316, 522, 817, 871, 1194
Bme1390I CCNGG 6 cut(s) 267, 706, 759, 831, 926, 1233
Bme18I GGWCC 6 cut(s) 332, 637, 779, 827, 1254, 1265
BmeT110I CYCGRG 1 cut(s) 193
BmgT120I GGNCC 7 cut(s) 332, 588, 637, 779, 827, 1254, 1265
BmiI GGNNCC 1 cut(s) 1255
BmrFI CCNGG 6 cut(s) 267, 706, 759, 831, 926, 1233
BmrI ACTGGG 2 cut(s) 939, 1260
BmtI GCTAGC 1 cut(s) 1199
BmuI ACTGGG 2 cut(s) 939, 1260
BoxI GACNNNNGTC 1 cut(s) 706
BplI GAGNNNNNCTC 2 cut(s) 1121, 1153
BpmI CTGGAG 3 cut(s) 741, 1146, 1254
Bpu10I CCTNAGC 1 cut(s) 1188
Bpu14I TTCGAA 1 cut(s) 1111
BpuEI CTTGAG 1 cut(s) 749
BpuMI CCSGG 1 cut(s) 267
Bsa29I ATCGAT 1 cut(s) 563
BsaAI YACGTR 2 cut(s) 419, 574
BsaBI GATNNNNATC 1 cut(s) 677
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 4 cut(s) 390, 704, 958, 989
BsaWI WCCGGW 2 cut(s) 850, 1424
BsaXI ACNNNNNCTCC 6 cut(s) 87, 117, 204, 234, 1350, 1380
Bsc4I CCNNNNNNNGG 3 cut(s) 761, 931, 959
Bse118I RCCGGY 2 cut(s) 247, 317
Bse1I ACTGG 4 cut(s) 635, 945, 1255, 1381
Bse3DI GCAATG 2 cut(s) 458, 1181
Bse8I GATNNNNATC 1 cut(s) 677
BseAI TCCGGA 1 cut(s) 1424
BseBI CCWGG 5 cut(s) 706, 759, 831, 926, 1233
BseCI ATCGAT 1 cut(s) 563
BseDI CCNNGG 4 cut(s) 390, 704, 958, 989
BseGI GGATG 2 cut(s) 87, 862
BseJI GATNNNNATC 1 cut(s) 677
BseLI CCNNNNNNNGG 3 cut(s) 761, 931, 959
BseMI GCAATG 2 cut(s) 458, 1181
BseMII CTCAG 3 cut(s) 355, 441, 1202
BseNI ACTGG 4 cut(s) 635, 945, 1255, 1381
BseXI GCAGC 5 cut(s) 176, 507, 802, 881, 1204
BseYI CCCAGC 1 cut(s) 107
Bsh1236I CGCG 1 cut(s) 155
Bsh1285I CGRYCG 1 cut(s) 266
BshFI GGCC 5 cut(s) 48, 275, 389, 590, 1231
BshVI ATCGAT 1 cut(s) 563
BsiEI CGRYCG 1 cut(s) 266
BsiHKAI GWGCWC 1 cut(s) 200
BsiHKCI CYCGRG 1 cut(s) 193
BsiSI CCGG 5 cut(s) 248, 266, 318, 851, 1425
BslFI GGGAC 3 cut(s) 408, 554, 1267
BslI CCNNNNNNNGG 3 cut(s) 761, 931, 959
BsmAI GTCTC 3 cut(s) 326, 725, 729
BsmFI GGGAC 3 cut(s) 408, 554, 1267
BsnI GGCC 5 cut(s) 48, 275, 389, 590, 1231
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 193
Bsp119I TTCGAA 1 cut(s) 1111
Bsp1286I GDGCHC 1 cut(s) 200
Bsp13I TCCGGA 1 cut(s) 1424
Bsp143I GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
BspACI CCGC 4 cut(s) 153, 312, 315, 762
BspANI GGCC 5 cut(s) 48, 275, 389, 590, 1231
BspCNI CTCAG 3 cut(s) 354, 442, 1201
BspDI ATCGAT 1 cut(s) 563
BspEI TCCGGA 1 cut(s) 1424
BspFNI CGCG 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 1255
BspMAI CTGCAG 1 cut(s) 587
BspMI ACCTGC 2 cut(s) 409, 599
BspOI GCTAGC 1 cut(s) 1199
BspPI GGATC 3 cut(s) 331, 576, 1025
BspT104I TTCGAA 1 cut(s) 1111
BspTI CTTAAG 1 cut(s) 1225
BspTNI GGTCTC 1 cut(s) 326
BsrDI GCAATG 2 cut(s) 458, 1181
BsrFI RCCGGY 2 cut(s) 247, 317
BsrI ACTGG 4 cut(s) 635, 945, 1255, 1381
BssAI RCCGGY 2 cut(s) 247, 317
BssECI CCNNGG 4 cut(s) 390, 704, 958, 989
BssMI GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
BssSI CACGAG 1 cut(s) 1338
BssT1I CCWWGG 3 cut(s) 390, 958, 989
Bst2BI CACGAG 1 cut(s) 1338
Bst2UI CCWGG 5 cut(s) 706, 759, 831, 926, 1233
Bst4CI ACNGT 1 cut(s) 332
Bst6I CTCTTC 1 cut(s) 329
BstAFI CTTAAG 1 cut(s) 1225
BstBAI YACGTR 2 cut(s) 419, 574
BstBI TTCGAA 1 cut(s) 1111
BstC8I GCNNGC 2 cut(s) 1197, 1292
BstDEI CTNAG 3 cut(s) 341, 450, 1188
BstF5I GGATG 2 cut(s) 87, 862
BstFNI CGCG 1 cut(s) 155
BstH2I RGCGCY 2 cut(s) 10, 1138
BstHHI GCGC 2 cut(s) 9, 1137
BstKTI GATC 6 cut(s) 85, 339, 571, 877, 1033, 1240
BstMAI GTCTC 3 cut(s) 326, 725, 729
BstMBI GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
BstMCI CGRYCG 1 cut(s) 266
BstMWI GCNNNNNNNGC 7 cut(s) 15, 161, 257, 311, 460, 614, 1192
BstNI CCWGG 5 cut(s) 706, 759, 831, 926, 1233
BstPAI GACNNNNGTC 1 cut(s) 706
BstSCI CCNGG 6 cut(s) 265, 704, 757, 829, 924, 1231
BstSFI CTRYAG 2 cut(s) 583, 819
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 5 cut(s) 176, 507, 802, 881, 1204
BstX2I RGATCY 1 cut(s) 1237
BstXI CCANNNNNNTGG 1 cut(s) 630
BstYI RGATCY 1 cut(s) 1237
Bsu15I ATCGAT 1 cut(s) 563
BsuRI GGCC 5 cut(s) 48, 275, 389, 590, 1231
BsuTUI ATCGAT 1 cut(s) 563
BtsCI GGATG 2 cut(s) 87, 862
BtsIMutI CAGTG 3 cut(s) 623, 952, 1267
BveI ACCTGC 2 cut(s) 409, 599
Cac8I GCNNGC 2 cut(s) 1197, 1292
CfoI GCGC 2 cut(s) 9, 1137
Cfr10I RCCGGY 2 cut(s) 247, 317
Cfr13I GGNCC 7 cut(s) 332, 588, 637, 779, 827, 1254, 1265
ClaI ATCGAT 1 cut(s) 563
CpoI CGGWCCG 1 cut(s) 332
CseI GACGC 3 cut(s) 144, 170, 1016
Csp6I GTAC 2 cut(s) 43, 575
CspCI CAANNNNNGTGG 2 cut(s) 1157, 1192
CspI CGGWCCG 1 cut(s) 332
CviAII CATG 3 cut(s) 125, 656, 1305
CviQI GTAC 2 cut(s) 43, 575
DdeI CTNAG 3 cut(s) 341, 450, 1188
DpnI GATC 6 cut(s) 84, 338, 570, 876, 1032, 1239
DpnII GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
DraI TTTAAA 1 cut(s) 480
EaeI YGGCCR 1 cut(s) 273
Eam1104I CTCTTC 1 cut(s) 329
EarI CTCTTC 1 cut(s) 329
Ecl136II GAGCTC 1 cut(s) 198
Eco130I CCWWGG 3 cut(s) 390, 958, 989
Eco147I AGGCCT 1 cut(s) 1231
Eco24I GRGCYC 1 cut(s) 200
Eco31I GGTCTC 1 cut(s) 326
Eco32I GATATC 1 cut(s) 922
Eco47I GGWCC 6 cut(s) 332, 637, 779, 827, 1254, 1265
Eco53kI GAGCTC 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 413
Eco72I CACGTG 1 cut(s) 419
Eco88I CYCGRG 1 cut(s) 193
EcoICRI GAGCTC 1 cut(s) 198
EcoRII CCWGG 5 cut(s) 704, 757, 829, 924, 1231
EcoRV GATATC 1 cut(s) 922
EcoT14I CCWWGG 3 cut(s) 390, 958, 989
EcoT38I GRGCYC 1 cut(s) 200
ErhI CCWWGG 3 cut(s) 390, 958, 989
FaeI CATG 3 cut(s) 128, 659, 1308
FaqI GGGAC 3 cut(s) 408, 554, 1267
FatI CATG 3 cut(s) 124, 655, 1304
FbaI TGATCA 1 cut(s) 82
FblI GTMKAC 2 cut(s) 136, 189
Fnu4HI GCNGC 8 cut(s) 153, 165, 312, 315, 521, 816, 870, 1193
FokI GGATG 2 cut(s) 74, 869
FriOI GRGCYC 1 cut(s) 200
Fsp4HI GCNGC 8 cut(s) 153, 165, 312, 315, 521, 816, 870, 1193
FspBI CTAG 5 cut(s) 794, 915, 1013, 1196, 1295
GlaI GCGC 2 cut(s) 8, 1136
GluI GCNGC 8 cut(s) 153, 165, 312, 315, 521, 816, 870, 1193
GsaI CCCAGC 1 cut(s) 111
GsuI CTGGAG 3 cut(s) 741, 1146, 1254
HaeII RGCGCY 2 cut(s) 10, 1138
HaeIII GGCC 5 cut(s) 48, 275, 389, 590, 1231
HapII CCGG 5 cut(s) 248, 266, 318, 851, 1425
HgaI GACGC 3 cut(s) 144, 170, 1016
HhaI GCGC 2 cut(s) 9, 1137
Hin1II CATG 3 cut(s) 128, 659, 1308
Hin6I GCGC 2 cut(s) 7, 1135
HinP1I GCGC 2 cut(s) 7, 1135
HincII GTYRAC 2 cut(s) 137, 190
HindII GTYRAC 2 cut(s) 137, 190
HindIII AAGCTT 1 cut(s) 1288
HinfI GANTC 3 cut(s) 488, 847, 1277
HpaII CCGG 5 cut(s) 248, 266, 318, 851, 1425
Hpy166II GTNNAC 4 cut(s) 137, 190, 577, 1265
Hpy188III TCNNGA 8 cut(s) 684, 728, 895, 1013, 1340, 1349, 1414, 1425
Hpy8I GTNNAC 4 cut(s) 137, 190, 577, 1265
Hpy99I CGWCG 3 cut(s) 138, 164, 673
HpyAV CCTTC 3 cut(s) 70, 187, 403
HpyCH4III ACNGT 1 cut(s) 332
HpyCH4IV ACGT 3 cut(s) 418, 573, 742
HpyCH4V TGCA 5 cut(s) 23, 585, 650, 785, 1221
HpyF10VI GCNNNNNNNGC 7 cut(s) 15, 161, 257, 311, 460, 614, 1192
HpyF3I CTNAG 3 cut(s) 341, 450, 1188
HpySE526I ACGT 3 cut(s) 418, 573, 742
Hsp92II CATG 3 cut(s) 128, 659, 1308
HspAI GCGC 2 cut(s) 7, 1135
Kpn2I TCCGGA 1 cut(s) 1424
Ksp22I TGATCA 1 cut(s) 82
Kzo9I GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
LmnI GCTCC 1 cut(s) 1427
Lsp1109I GCAGC 5 cut(s) 176, 507, 802, 881, 1204
MaeI CTAG 5 cut(s) 794, 915, 1013, 1196, 1295
MaeII ACGT 3 cut(s) 418, 573, 742
MaeIII GTNAC 4 cut(s) 464, 997, 1147, 1333
MalI GATC 6 cut(s) 84, 338, 570, 876, 1032, 1239
MboI GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
MboII GAAGA 2 cut(s) 316, 1364
MfeI CAATTG 1 cut(s) 645
MflI RGATCY 1 cut(s) 1237
MhlI GDGCHC 1 cut(s) 200
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 9 cut(s) 370, 618, 645, 839, 935, 1113, 1159, 1173, 1343
MluNI TGGCCA 1 cut(s) 275
MmeI TCCRAC 3 cut(s) 183, 273, 615
Mox20I TGGCCA 1 cut(s) 275
MroI TCCGGA 1 cut(s) 1424
MroXI GAANNNNTTC 2 cut(s) 380, 939
MscI TGGCCA 1 cut(s) 275
MseI TTAA 6 cut(s) 479, 807, 1116, 1172, 1226, 1325
Msp20I TGGCCA 1 cut(s) 275
MspA1I CMGCKG 1 cut(s) 1124
MspCI CTTAAG 1 cut(s) 1225
MspI CCGG 5 cut(s) 248, 266, 318, 851, 1425
MspR9I CCNGG 6 cut(s) 267, 706, 759, 831, 926, 1233
MunI CAATTG 1 cut(s) 645
MvaI CCWGG 5 cut(s) 706, 759, 831, 926, 1233
MvnI CGCG 1 cut(s) 155
MwoI GCNNNNNNNGC 7 cut(s) 15, 161, 257, 311, 460, 614, 1192
NciI CCSGG 1 cut(s) 267
NdeII GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
NheI GCTAGC 1 cut(s) 1195
NlaIII CATG 3 cut(s) 128, 659, 1308
NlaIV GGNNCC 1 cut(s) 1255
NmuCI GTSAC 3 cut(s) 464, 997, 1147
NspV TTCGAA 1 cut(s) 1111
PceI AGGCCT 1 cut(s) 1231
PcsI WCGNNNNNNNCGW 2 cut(s) 61, 156
PdmI GAANNNNTTC 2 cut(s) 380, 939
PfeI GAWTC 3 cut(s) 488, 847, 1277
PfoI TCCNGGA 1 cut(s) 829
PkrI GCNGC 8 cut(s) 154, 166, 313, 316, 522, 817, 871, 1194
PmaCI CACGTG 1 cut(s) 419
PmlI CACGTG 1 cut(s) 419
Ppu21I YACGTR 2 cut(s) 419, 574
PshAI GACNNNNGTC 1 cut(s) 706
PsiI TTATAA 1 cut(s) 603
Psp124BI GAGCTC 1 cut(s) 200
Psp6I CCWGG 5 cut(s) 704, 757, 829, 924, 1231
PspCI CACGTG 1 cut(s) 419
PspFI CCCAGC 1 cut(s) 107
PspGI CCWGG 5 cut(s) 704, 757, 829, 924, 1231
PspN4I GGNNCC 1 cut(s) 1255
PspPI GGNCC 7 cut(s) 332, 588, 637, 779, 827, 1254, 1265
PsrI GAACNNNNNNTAC 2 cut(s) 679, 711
PstI CTGCAG 1 cut(s) 587
PsuI RGATCY 1 cut(s) 1237
PvuII CAGCTG 1 cut(s) 1124
RsaI GTAC 2 cut(s) 44, 576
RsaNI GTAC 2 cut(s) 43, 575
Rsr2I CGGWCCG 1 cut(s) 332
RsrII CGGWCCG 1 cut(s) 332
SacI GAGCTC 1 cut(s) 200
SalI GTCGAC 2 cut(s) 135, 188
SaqAI TTAA 6 cut(s) 479, 807, 1116, 1172, 1226, 1325
SatI GCNGC 8 cut(s) 153, 165, 312, 315, 521, 816, 870, 1193
Sau3AI GATC 6 cut(s) 82, 336, 568, 874, 1030, 1237
Sau96I GGNCC 7 cut(s) 332, 588, 637, 779, 827, 1254, 1265
ScrFI CCNGG 6 cut(s) 267, 706, 759, 831, 926, 1233
SduI GDGCHC 1 cut(s) 200
SfcI CTRYAG 2 cut(s) 583, 819
SfuI TTCGAA 1 cut(s) 1111
SinI GGWCC 6 cut(s) 332, 637, 779, 827, 1254, 1265
SmlI CTYRAG 2 cut(s) 728, 1225
SmoI CTYRAG 2 cut(s) 728, 1225
Sse9I AATT 9 cut(s) 370, 618, 645, 839, 935, 1113, 1159, 1173, 1343
SseBI AGGCCT 1 cut(s) 1231
SsiI CCGC 4 cut(s) 153, 312, 315, 762
SspMI CTAG 5 cut(s) 794, 915, 1013, 1196, 1295
SstI GAGCTC 1 cut(s) 200
StuI AGGCCT 1 cut(s) 1231
StyD4I CCNGG 6 cut(s) 265, 704, 757, 829, 924, 1231
StyI CCWWGG 3 cut(s) 390, 958, 989
TaaI ACNGT 1 cut(s) 332
TaiI ACGT 3 cut(s) 421, 576, 745
TaqI TCGA 9 cut(s) 13, 136, 183, 189, 262, 563, 671, 700, 1111
TasI AATT 9 cut(s) 370, 618, 645, 839, 935, 1113, 1159, 1173, 1343
TauI GCSGC 3 cut(s) 155, 314, 317
TfiI GAWTC 3 cut(s) 488, 847, 1277
Tru1I TTAA 6 cut(s) 479, 807, 1116, 1172, 1226, 1325
Tru9I TTAA 6 cut(s) 479, 807, 1116, 1172, 1226, 1325
TscAI CASTG 3 cut(s) 630, 952, 1267
TseFI GTSAC 3 cut(s) 464, 997, 1147
TseI GCWGC 5 cut(s) 164, 520, 815, 869, 1192
Tsp45I GTSAC 3 cut(s) 464, 997, 1147
TspDTI ATGAA 8 cut(s) 17, 113, 169, 432, 549, 852, 914, 1377
TspRI CASTG 3 cut(s) 630, 952, 1267
Vha464I CTTAAG 1 cut(s) 1225
VpaK11BI GGWCC 6 cut(s) 332, 637, 779, 827, 1254, 1265
XapI RAATTY 2 cut(s) 935, 1343
XbaI TCTAGA 1 cut(s) 1012
XmiI GTMKAC 2 cut(s) 136, 189
XmnI GAANNNNTTC 2 cut(s) 380, 939
XspI CTAG 5 cut(s) 794, 915, 1013, 1196, 1295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.