AT1G21150
ERF Family

mitochondrial transcription termination factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000263
Physical Location & Seq
Reverse (-)
7406218 .. 7407870
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G21150.1

Sequence Viewer

Length: 1173 bp
ATGTCGAGCTTATTACACTGTAGAAATGTCGTAGATTGTGCGTTTACTTCTTCCACTGTTCGTCGCATTGTCAATTTAGGGTTTTTAGTGGGTAGAATAAGAACGTTGTGTTCAGTGTCACAAGTGAAATCAGAGAATCTCGAAAAGCAAAAACCATGTTTGGAATCTTTTACAGTTTCTTATCTCGTGGATTCTTGTGGACTGTCTTTGGAATCTGCTAAATCGAATTCCAGATTCGTCAAATTGGTTTCGTCCAAGAAACCAGACTCTGTTCTTGCTCTCTTCAAGGACCATGGCTTCACCAATGACCAGATCACCAGTGTCATCAAATCCTTTCCTCGTGTTCTGTCACTGAGCCCGGAAGATGTAATCTCGCCCAAGCTCATGTTTTTCAGTTCTATCGGGTTTTCGACCTCGGATACTGCGAAAATGATCTCTTCTTCCCCGAAAATGCTATCATATAGCTTGCACAAAAGATTGATCCCTTGCTATGATTCCCTCAAGAGCATACTCGTTGAGGAAGAAAGTGTTGTCAAGTGTCTCAAGCGTGGAATCAGATGTTTCTCATTGAAGATTACACATTGTGTGTCTCTTCGTGTCTCCATTTGTAGAGAGCTTGGAGTTCCTGACAAAAGCATCAAGTGGTTGGTTCAAGCGTCTCCATTCACTTTTTTCTCTCGTGAGAGAAGATTCAACGAGGTCTTAAACAGAGTTTGCAGCTACGGTTTTGACCCGAAAAAGGCGGGTTTTGTTCACGCTATGGTAGCCTTTGATTGCACGAGTGAATCAGCAATGGAGCGGAAATTTAAGTTGTTCCAATGTTTTGGTTGGTCTAAAGAAGATTTCGTCGCAGCGATCATGAGATTCCCAAACTGTGTGACGGTTTCAGATGAGAAGATAATGTACACATTGGAGTACCTTGTAAACAACATTGGTCTGCAAGCTCGTGACATTGTTGCAAGACCGGTGGTGTTATCTCTGAGCATGGAGAAGAGAATCAAACCGAGGAACCAGGTCATCTCTTTGCTTCTCTCCAAAGGACTTGTGAAGAAGGAAGACATCAACTATTTCACTATACTAAAGCTGAAAAGCTCCGAGTTCATGGATAAGTTTGTGCTGAAATATCAGGATGAGATGCCACAACTTGTACAACCCTTTACAAGTAATCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

390

Amino Acids

44.29

Weight (kDa)

9.42

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 92 - 224 7.2e-20 mTERF
mTERF PF02536 260 - 367 5e-18 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000263)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21150 AT1G21150 AT1G21150
fragaria_vesca FvH4_4g17900 FvH4_6g26110 FvH4_6g33880 FvH4_6g33900 FvH4_6g34011 FvH4_6g34011 FvH4_6g34011 FvH4_6g34011 FvH4_6g34030 FvH4_6g34040 FvH4_6g34070 FvH4_6g34070 FvH4_7g12830
malus_domestica MD09G1189800.v1.1 MD09G1189900.v1.1 MD09G1190000.v1.1 MD14G1088800.v1.1 MD14G1088900.v1.1 MD17G1172900.v1.1
pyrus_communis pycom07g03460 pycom09g10650 pycom14g07860
rosa_chinensis RchiOBHm_Chr1g0351891 RchiOBHm_Chr1g0351901 RchiOBHm_Chr2g0143771 RchiOBHm_Chr2g0143861 RchiOBHm_Chr2g0143881 RchiOBHm_Chr2g0143941 RchiOBHm_Chr2g0143951 RchiOBHm_Chr2g0144081 RchiOBHm_Chr2g0144091 RchiOBHm_Chr2g0144211 RchiOBHm_Chr2g0144231 RchiOBHm_Chr2g0144241 RchiOBHm_Chr2g0144291 RchiOBHm_Chr2g0144301 RchiOBHm_Chr2g0144311 RchiOBHm_Chr2g0144331 RchiOBHm_Chr2g0144341 RchiOBHm_Chr4g0422021 RchiOBHm_Chr4g0422031
rosa_laevigata RLG00000007639 RLG00000020063 RLG00000020071 RLG00000020072 RLG00000020074
rosa_multiflora Rmu_co8214640.1_g000001 Rmu_co8471033.1_g000001 Rmu_sc0000789.1_g000002 Rmu_sc0001321.1_g000001 Rmu_sc0004340.1_g000001 Rmu_sc0004897.1_g000001 Rmu_sc0007105.1_g000005 Rmu_sc0009498.1_g000001 Rmu_sc0009498.1_g000002 Rmu_sc0019136.1_g000001 Rmu_sc0020327.1_g000002 Rmu_sc0020327.1_g000003 Rmu_sc0022905.1_g000001 Rmu_sc0032602.1_g000003 Rmu_sc0032602.1_g000004
rosa_roxburghii Rroxscaffold_2G00101380 Rroxscaffold_2G00101390 Rroxscaffold_2G00101400 Rroxscaffold_2G00101410 Rroxscaffold_2G00101480 Rroxscaffold_2G00101490 Rroxscaffold_4G00303470 Rroxscaffold_5G00364130 Rroxscaffold_5G00364150
rosa_rugosa Rorug01G0222600 Rorug02G0384700 Rorug02G0384800 Rorug02G0385800 Rorug02G0385900 Rorug02G0386000 Rorug02G0386000 Rorug02G0386100 Rorug04G0176700 Rorug04G0176800.1
rosa_samantha Rh1AG236500 Rh1AG236600 Rh1BG206900 Rh1CG221000 Rh1CG221100 Rh2BG444800 Rh2BG444900 Rh2BG446600 Rh2BG446700 Rh2BG447600 Rh2BG448100 Rh2BG448400 Rh2BG448500 Rh2BG448700 Rh2BG448800 Rh2CG423500 Rh2CG423600 Rh2CG424800 Rh2CG424900 Rh2CG425100 Rh2CG425200 Rh2DG455200 Rh2DG455300 Rh2DG456900 Rh2DG457000 Rh2DG457100 Rh2DG457600 Rh2DG457900 Rh2DG458000 Rh2DG458300 Rh2DG458400 Rh4AG236100 Rh4AG236200 Rh4BG239200 Rh4CG250900 Rh4CG251100
rosa_wichuraiana Rw0G000400 Rw0G015990 Rw0G017200 Rw1G020580 Rw2G033310 Rw2G035630 Rw2G035640 Rw2G035790 Rw2G035800 Rw2G035840 Rw2G036160 Rw4G019830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 799
AciI CCGC 2 cut(s) 743, 799
AclI AACGTT 1 cut(s) 104
AclWI GGATC 1 cut(s) 475
AcsI RAATTY 2 cut(s) 226, 803
AdeI CACNNNGTG 1 cut(s) 584
AfaI GTAC 3 cut(s) 905, 917, 1149
AfiI CCNNNNNNNGG 1 cut(s) 739
AgeI ACCGGT 1 cut(s) 964
AgsI TTSAA 4 cut(s) 286, 571, 653, 694
AjnI CCWGG 1 cut(s) 1011
AluBI AGCT 8 cut(s) 9, 382, 465, 616, 720, 944, 1084, 1092
AluI AGCT 8 cut(s) 9, 382, 465, 616, 720, 944, 1084, 1092
Alw26I GTCTC 4 cut(s) 545, 594, 604, 663
AlwI GGATC 1 cut(s) 475
AlwNI CAGNNNCTG 1 cut(s) 269
ApeKI GCWGC 2 cut(s) 717, 851
ApoI RAATTY 2 cut(s) 226, 803
AsiGI ACCGGT 1 cut(s) 964
AspS9I GGNCC 1 cut(s) 289
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 2 cut(s) 292, 307
AvaII GGWCC 1 cut(s) 289
BanII GRGCYC 1 cut(s) 359
BarI GAAGNNNNNNTAC 2 cut(s) 887, 919
BauI CACGAG 5 cut(s) 185, 339, 678, 778, 945
BbsI GAAGAC 1 cut(s) 1062
BbvI GCAGC 2 cut(s) 729, 863
BciT130I CCWGG 1 cut(s) 1013
BciVI GTATCC 1 cut(s) 412
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 4 cut(s) 545, 594, 604, 663
BfmI CTRYAG 1 cut(s) 19
BfuI GTATCC 1 cut(s) 412
BisI GCNGC 2 cut(s) 718, 852
BlsI GCNGC 2 cut(s) 719, 853
Bme1390I CCNGG 2 cut(s) 359, 1013
Bme18I GGWCC 1 cut(s) 289
BmgT120I GGNCC 1 cut(s) 289
BmiI GGNNCC 1 cut(s) 1010
BmrFI CCNGG 2 cut(s) 359, 1013
BmsI GCATC 2 cut(s) 645, 1125
BpiI GAAGAC 1 cut(s) 1062
BpuEI CTTGAG 2 cut(s) 485, 527
BpuMI CCSGG 1 cut(s) 359
Bsa29I ATCGAT 1 cut(s) 1168
BsaJI CCNNGG 3 cut(s) 292, 414, 1004
BsaWI WCCGGW 1 cut(s) 964
Bsc4I CCNNNNNNNGG 1 cut(s) 739
Bse118I RCCGGY 1 cut(s) 964
Bse1I ACTGG 1 cut(s) 318
Bse3DI GCAATG 1 cut(s) 798
BseBI CCWGG 1 cut(s) 1013
BseCI ATCGAT 1 cut(s) 1168
BseDI CCNNGG 3 cut(s) 292, 414, 1004
BseGI GGATG 1 cut(s) 1135
BseLI CCNNNNNNNGG 1 cut(s) 739
BseMI GCAATG 1 cut(s) 798
BseMII CTCAG 2 cut(s) 344, 971
BseNI ACTGG 1 cut(s) 318
BseXI GCAGC 2 cut(s) 729, 863
BshTI ACCGGT 1 cut(s) 964
BshVI ATCGAT 1 cut(s) 1168
BsiSI CCGG 2 cut(s) 359, 965
BslI CCNNNNNNNGG 1 cut(s) 739
BsmAI GTCTC 4 cut(s) 545, 594, 604, 663
BsmBI CGTCTC 1 cut(s) 663
Bsp1286I GDGCHC 1 cut(s) 359
Bsp1407I TGTACA 2 cut(s) 903, 1147
Bsp143I GATC 4 cut(s) 312, 432, 480, 855
Bsp19I CCATGG 1 cut(s) 292
BspACI CCGC 2 cut(s) 743, 799
BspCNI CTCAG 2 cut(s) 345, 972
BspDI ATCGAT 1 cut(s) 1168
BspHI TCATGA 1 cut(s) 858
BspLI GGNNCC 1 cut(s) 1010
BspPI GGATC 1 cut(s) 475
BsrBI CCGCTC 1 cut(s) 799
BsrDI GCAATG 1 cut(s) 798
BsrFI RCCGGY 1 cut(s) 964
BsrGI TGTACA 2 cut(s) 903, 1147
BsrI ACTGG 1 cut(s) 318
BssAI RCCGGY 1 cut(s) 964
BssECI CCNNGG 3 cut(s) 292, 414, 1004
BssMI GATC 4 cut(s) 312, 432, 480, 855
BssSI CACGAG 5 cut(s) 185, 339, 678, 778, 945
BssT1I CCWWGG 1 cut(s) 292
Bst2BI CACGAG 5 cut(s) 185, 339, 678, 778, 945
Bst2UI CCWGG 1 cut(s) 1013
Bst4CI ACNGT 7 cut(s) 20, 58, 175, 204, 725, 875, 883
Bst6I CTCTTC 4 cut(s) 287, 442, 597, 986
BstAUI TGTACA 2 cut(s) 903, 1147
BstC8I GCNNGC 2 cut(s) 467, 942
BstDEI CTNAG 2 cut(s) 353, 980
BstDSI CCRYGG 1 cut(s) 292
BstF5I GGATG 1 cut(s) 1135
BstKTI GATC 4 cut(s) 315, 435, 483, 858
BstMAI GTCTC 4 cut(s) 545, 594, 604, 663
BstMBI GATC 4 cut(s) 312, 432, 480, 855
BstMWI GCNNNNNNNGC 1 cut(s) 764
BstNI CCWGG 1 cut(s) 1013
BstSCI CCNGG 2 cut(s) 357, 1011
BstSFI CTRYAG 1 cut(s) 19
BstV1I GCAGC 2 cut(s) 729, 863
BstV2I GAAGAC 1 cut(s) 1062
BstXI CCANNNNNNTGG 1 cut(s) 824
Bsu15I ATCGAT 1 cut(s) 1168
BsuI GTATCC 1 cut(s) 412
BsuTUI ATCGAT 1 cut(s) 1168
BtgI CCRYGG 1 cut(s) 292
BtsCI GGATG 1 cut(s) 1135
BtsIMutI CAGTG 5 cut(s) 16, 54, 120, 325, 350
Cac8I GCNNGC 2 cut(s) 467, 942
CaiI CAGNNNCTG 1 cut(s) 269
CciI TCATGA 1 cut(s) 858
Cfr10I RCCGGY 1 cut(s) 964
Cfr13I GGNCC 1 cut(s) 289
ClaI ATCGAT 1 cut(s) 1168
CseI GACGC 1 cut(s) 645
CsiI ACCWGGT 1 cut(s) 1011
Csp6I GTAC 3 cut(s) 904, 916, 1148
CspAI ACCGGT 1 cut(s) 964
CspCI CAANNNNNGTGG 2 cut(s) 948, 983
CviAII CATG 6 cut(s) 156, 293, 385, 859, 985, 1102
CviQI GTAC 3 cut(s) 904, 916, 1148
DdeI CTNAG 2 cut(s) 353, 980
DpnI GATC 4 cut(s) 314, 434, 482, 857
DpnII GATC 4 cut(s) 312, 432, 480, 855
DraIII CACNNNGTG 1 cut(s) 584
Eam1104I CTCTTC 4 cut(s) 287, 442, 597, 986
EarI CTCTTC 4 cut(s) 287, 442, 597, 986
Eco130I CCWWGG 1 cut(s) 292
Eco24I GRGCYC 1 cut(s) 359
Eco47I GGWCC 1 cut(s) 289
EcoRI GAATTC 1 cut(s) 226
EcoRII CCWGG 1 cut(s) 1011
EcoT14I CCWWGG 1 cut(s) 292
EcoT38I GRGCYC 1 cut(s) 359
ErhI CCWWGG 1 cut(s) 292
Esp3I CGTCTC 1 cut(s) 663
FaeI CATG 6 cut(s) 159, 296, 388, 862, 988, 1105
FatI CATG 6 cut(s) 155, 292, 384, 858, 984, 1101
FauI CCCGC 1 cut(s) 736
Fnu4HI GCNGC 2 cut(s) 718, 852
FokI GGATG 1 cut(s) 1142
FriOI GRGCYC 1 cut(s) 359
Fsp4HI GCNGC 2 cut(s) 718, 852
GluI GCNGC 2 cut(s) 718, 852
HapII CCGG 2 cut(s) 359, 965
HgaI GACGC 1 cut(s) 645
Hin1II CATG 6 cut(s) 159, 296, 388, 862, 988, 1105
HpaII CCGG 2 cut(s) 359, 965
HphI GGTGA 2 cut(s) 292, 307
Hpy166II GTNNAC 5 cut(s) 45, 200, 754, 906, 925
Hpy188I TCNGA 6 cut(s) 133, 418, 557, 889, 981, 1096
Hpy188III TCNNGA 8 cut(s) 140, 231, 502, 626, 680, 859, 947, 1127
Hpy8I GTNNAC 5 cut(s) 45, 200, 754, 906, 925
Hpy99I CGWCG 2 cut(s) 66, 851
HpyAV CCTTC 1 cut(s) 1045
HpyCH4III ACNGT 7 cut(s) 20, 58, 175, 204, 725, 875, 883
HpyCH4IV ACGT 1 cut(s) 104
HpyCH4V TGCA 5 cut(s) 469, 717, 777, 940, 959
HpyF10VI GCNNNNNNNGC 1 cut(s) 764
HpyF3I CTNAG 2 cut(s) 353, 980
HpySE526I ACGT 1 cut(s) 104
Hsp92II CATG 6 cut(s) 159, 296, 388, 862, 988, 1105
Kzo9I GATC 4 cut(s) 312, 432, 480, 855
LmnI GCTCC 2 cut(s) 796, 1097
Lsp1109I GCAGC 2 cut(s) 729, 863
LweI GCATC 2 cut(s) 645, 1125
MabI ACCWGGT 1 cut(s) 1011
MaeII ACGT 1 cut(s) 104
MaeIII GTNAC 4 cut(s) 117, 348, 877, 947
MalI GATC 4 cut(s) 314, 434, 482, 857
MbiI CCGCTC 1 cut(s) 799
MboI GATC 4 cut(s) 312, 432, 480, 855
MhlI GDGCHC 1 cut(s) 359
MluCI AATT 4 cut(s) 73, 226, 242, 803
MlyI GAGTC 1 cut(s) 260
MnlI CCTC 6 cut(s) 348, 424, 509, 511, 691, 999
MseI TTAA 2 cut(s) 704, 807
MspI CCGG 2 cut(s) 359, 965
MspR9I CCNGG 2 cut(s) 359, 1013
MvaI CCWGG 1 cut(s) 1013
MwoI GCNNNNNNNGC 1 cut(s) 764
NciI CCSGG 1 cut(s) 359
NcoI CCATGG 1 cut(s) 292
NdeII GATC 4 cut(s) 312, 432, 480, 855
NlaIII CATG 6 cut(s) 159, 296, 388, 862, 988, 1105
NlaIV GGNNCC 1 cut(s) 1010
NmuCI GTSAC 4 cut(s) 117, 348, 877, 947
PagI TCATGA 1 cut(s) 858
PcsI WCGNNNNNNNCGW 1 cut(s) 422
PinAI ACCGGT 1 cut(s) 964
PkrI GCNGC 2 cut(s) 719, 853
PleI GAGTC 1 cut(s) 260
PpsI GAGTC 1 cut(s) 260
Psp1406I AACGTT 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 1011
PspGI CCWGG 1 cut(s) 1011
PspN4I GGNNCC 1 cut(s) 1010
PspPI GGNCC 1 cut(s) 289
PstNI CAGNNNCTG 1 cut(s) 269
RsaI GTAC 3 cut(s) 905, 917, 1149
RsaNI GTAC 3 cut(s) 904, 916, 1148
SaqAI TTAA 2 cut(s) 704, 807
SatI GCNGC 2 cut(s) 718, 852
Sau3AI GATC 4 cut(s) 312, 432, 480, 855
Sau96I GGNCC 1 cut(s) 289
SchI GAGTC 1 cut(s) 260
ScrFI CCNGG 2 cut(s) 359, 1013
SduI GDGCHC 1 cut(s) 359
SexAI ACCWGGT 1 cut(s) 1011
SfaNI GCATC 2 cut(s) 645, 1125
SfcI CTRYAG 1 cut(s) 19
SinI GGWCC 1 cut(s) 289
SmlI CTYRAG 2 cut(s) 500, 542
SmoI CTYRAG 2 cut(s) 500, 542
Sse9I AATT 4 cut(s) 73, 226, 242, 803
SsiI CCGC 2 cut(s) 743, 799
StyD4I CCNGG 2 cut(s) 357, 1011
StyI CCWWGG 1 cut(s) 292
TaaI ACNGT 7 cut(s) 20, 58, 175, 204, 725, 875, 883
TaiI ACGT 1 cut(s) 107
TaqI TCGA 5 cut(s) 5, 141, 224, 410, 1168
TasI AATT 4 cut(s) 73, 226, 242, 803
TatI WGTACW 2 cut(s) 903, 1147
Tru1I TTAA 2 cut(s) 704, 807
Tru9I TTAA 2 cut(s) 704, 807
TscAI CASTG 5 cut(s) 23, 61, 120, 325, 357
TseFI GTSAC 4 cut(s) 117, 348, 877, 947
TseI GCWGC 2 cut(s) 717, 851
Tsp45I GTSAC 4 cut(s) 117, 348, 877, 947
TspDTI ATGAA 1 cut(s) 1090
TspRI CASTG 5 cut(s) 23, 61, 120, 325, 357
VpaK11BI GGWCC 1 cut(s) 289
XapI RAATTY 2 cut(s) 226, 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.