pycom14g07860
ERF Family

Mitochondrial transcription termination factor family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0000263
Physical Location & Seq
Reverse (-)
8192347 .. 8193729
1383 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g07860.2

Sequence Viewer

Length: 1203 bp
ATGAATAAAATTGCAGCTGCAGCTTCAGAAGCTTCAAATTTTGTAAGAGCTTGGCAGTTGCTTCGCTATGCTGCTTCTCTCCATCCACCACATTTTAGCAGATCATTATCATCAGAACCGTTGTTAGAATCTGGATTAGATGAAGCACAAGAATGTGAAGGCTCTATTACAGTGTCGTATCTCGTTAATTCATGTGGATTTTCCGCAGAAAAGGCTCTTACATTGTCTAAGAAAGTAAGCTTCGAAACCACAGAGAGACCAGATTCTGTCCTTGGTCTTCTCAGAGACCATGGATTCGCTGATTCCGAAATCTCCAAACTTGTTAGTAAAGTCCCAAGGCTGCTTTTAGCCGACCCTGAGAAGATCCTTTTGCCGAAACTTGAGTTTTTGCGTTCTCTAGGCCTTTCAGGCACGAGCATTTCTCTCGCCATCTGTAGGAATCCTATTTTCTTGACTGCCAGCTTGAAGAATGCTCTAGTTCCTGGTTTTAATCTCTTCAAAAAGGAACTCCTCAGTGATGAAAAAGTTGTGAACCTTATAACACGTTCGTGGGGAGTTTTGAGTGATAGGGTGCAAAGTAATATTGCTCAAAATCTCTCAGTTCTGAGAGCACTTGAAGTGCCGCTACCCTCTATCTCTGTATTACTGAGCTGTCACCCCGGAGTCGTGTGTCAAAAACCTGATGACTTTAACAAAGATGTGGAGAAGGTCGTCGGTATGGGATTCACGCCTAAGACGTTAACATTTGTCAATGGACTCCACGTGATTGCGACAATCACCAAATCGACATGGGTGCACAAATTGGAGGTTTACAAGAGCTGTGGCTGGACTGAAGAGGAGATCCTGTTGGCTTTTAGAAAAAAACCCACTTGTATGTGTCTGTCAGAGAAGAATATAAGAAGTAAAATGGATTTTTTTGTAAACAAGATGGGTTGGCAGCCTGCATATCTCGCCAGATATCCTGACTTTCTATCACTTAGTCTGGAGCGGAGGATCATTCCAAGGTGTTCTGTCATTAGAGTCCTGTTGGTGAAGGGCTTGCTGAAGAAAAAGTATTCCATATCATCATTGTTGATTACCATTGATAGTTGCTTTATAAGTAAGTTTGTGACTCGCTATCAAGGAAGCGTGCCTCAACTTTTGGATATCTTTCAAGGGAAATTAAGTCTTCAGGAACTTGGCTTTCAATTTGAGGGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

401

Amino Acids

44.55

Weight (kDa)

9.12

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000263)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21150 AT1G21150 AT1G21150
fragaria_vesca FvH4_4g17900 FvH4_6g26110 FvH4_6g33880 FvH4_6g33900 FvH4_6g34011 FvH4_6g34011 FvH4_6g34011 FvH4_6g34011 FvH4_6g34030 FvH4_6g34040 FvH4_6g34070 FvH4_6g34070 FvH4_7g12830
malus_domestica MD09G1189800.v1.1 MD09G1189900.v1.1 MD09G1190000.v1.1 MD14G1088800.v1.1 MD14G1088900.v1.1 MD17G1172900.v1.1
pyrus_communis pycom07g03460 pycom09g10650 pycom14g07860
rosa_chinensis RchiOBHm_Chr1g0351891 RchiOBHm_Chr1g0351901 RchiOBHm_Chr2g0143771 RchiOBHm_Chr2g0143861 RchiOBHm_Chr2g0143881 RchiOBHm_Chr2g0143941 RchiOBHm_Chr2g0143951 RchiOBHm_Chr2g0144081 RchiOBHm_Chr2g0144091 RchiOBHm_Chr2g0144211 RchiOBHm_Chr2g0144231 RchiOBHm_Chr2g0144241 RchiOBHm_Chr2g0144291 RchiOBHm_Chr2g0144301 RchiOBHm_Chr2g0144311 RchiOBHm_Chr2g0144331 RchiOBHm_Chr2g0144341 RchiOBHm_Chr4g0422021 RchiOBHm_Chr4g0422031
rosa_laevigata RLG00000007639 RLG00000020063 RLG00000020071 RLG00000020072 RLG00000020074
rosa_multiflora Rmu_co8214640.1_g000001 Rmu_co8471033.1_g000001 Rmu_sc0000789.1_g000002 Rmu_sc0001321.1_g000001 Rmu_sc0004340.1_g000001 Rmu_sc0004897.1_g000001 Rmu_sc0007105.1_g000005 Rmu_sc0009498.1_g000001 Rmu_sc0009498.1_g000002 Rmu_sc0019136.1_g000001 Rmu_sc0020327.1_g000002 Rmu_sc0020327.1_g000003 Rmu_sc0022905.1_g000001 Rmu_sc0032602.1_g000003 Rmu_sc0032602.1_g000004
rosa_roxburghii Rroxscaffold_2G00101380 Rroxscaffold_2G00101390 Rroxscaffold_2G00101400 Rroxscaffold_2G00101410 Rroxscaffold_2G00101480 Rroxscaffold_2G00101490 Rroxscaffold_4G00303470 Rroxscaffold_5G00364130 Rroxscaffold_5G00364150
rosa_rugosa Rorug01G0222600 Rorug02G0384700 Rorug02G0384800 Rorug02G0385800 Rorug02G0385900 Rorug02G0386000 Rorug02G0386000 Rorug02G0386100 Rorug04G0176700 Rorug04G0176800.1
rosa_samantha Rh1AG236500 Rh1AG236600 Rh1BG206900 Rh1CG221000 Rh1CG221100 Rh2BG444800 Rh2BG444900 Rh2BG446600 Rh2BG446700 Rh2BG447600 Rh2BG448100 Rh2BG448400 Rh2BG448500 Rh2BG448700 Rh2BG448800 Rh2CG423500 Rh2CG423600 Rh2CG424800 Rh2CG424900 Rh2CG425100 Rh2CG425200 Rh2DG455200 Rh2DG455300 Rh2DG456900 Rh2DG457000 Rh2DG457100 Rh2DG457600 Rh2DG457900 Rh2DG458000 Rh2DG458300 Rh2DG458400 Rh4AG236100 Rh4AG236200 Rh4BG239200 Rh4CG250900 Rh4CG251100
rosa_wichuraiana Rw0G000400 Rw0G015990 Rw0G017200 Rw1G020580 Rw2G033310 Rw2G035630 Rw2G035640 Rw2G035790 Rw2G035800 Rw2G035840 Rw2G036160 Rw4G019830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 539, 1097
AccBSI CCGCTC 1 cut(s) 988
AciI CCGC 3 cut(s) 204, 623, 988
AclWI GGATC 3 cut(s) 358, 835, 1001
AcsI RAATTY 1 cut(s) 37
AcuI CTGAAG 4 cut(s) 9, 852, 1064, 1154
AcvI CACGTG 1 cut(s) 763
AfiI CCNNNNNNNGG 1 cut(s) 435
AflIII ACRYGT 1 cut(s) 542
AgsI TTSAA 6 cut(s) 36, 466, 499, 617, 1154, 1187
AjnI CCWGG 1 cut(s) 481
AleI CACNNNNGTG 1 cut(s) 547
AluBI AGCT 8 cut(s) 17, 23, 32, 50, 240, 462, 651, 819
AluI AGCT 8 cut(s) 17, 23, 32, 50, 240, 462, 651, 819
Alw21I GWGCWC 2 cut(s) 613, 798
Alw26I GTCTC 2 cut(s) 250, 279
Alw44I GTGCAC 1 cut(s) 794
AlwI GGATC 3 cut(s) 358, 835, 1001
AlwNI CAGNNNCTG 1 cut(s) 266
AoxI GGCC 1 cut(s) 400
ApaLI GTGCAC 1 cut(s) 794
ApeKI GCWGC 6 cut(s) 14, 17, 20, 71, 340, 937
ApoI RAATTY 1 cut(s) 37
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
AsuC2I CCSGG 1 cut(s) 660
AsuHPI GGTGA 3 cut(s) 647, 769, 1042
AsuII TTCGAA 1 cut(s) 243
BaeGI GKGCMC 1 cut(s) 798
BarI GAAGNNNNNNTAC 2 cut(s) 609, 641
BauI CACGAG 1 cut(s) 412
BbrPI CACGTG 1 cut(s) 763
BbsI GAAGAC 2 cut(s) 269, 1160
Bbv12I GWGCWC 2 cut(s) 613, 798
BbvI GCAGC 6 cut(s) 4, 26, 32, 58, 327, 949
BccI CCATC 3 cut(s) 90, 437, 922
BcgI CGANNNNNNTGC 6 cut(s) 44, 78, 406, 440, 775, 809
BciT130I CCWGG 1 cut(s) 483
BcnI CCSGG 1 cut(s) 660
BcoDI GTCTC 2 cut(s) 250, 279
BfaI CTAG 2 cut(s) 398, 476
BfmI CTRYAG 2 cut(s) 18, 433
BglI GCCNNNNNGGC 1 cut(s) 408
BisI GCNGC 7 cut(s) 15, 18, 21, 72, 341, 623, 938
BlsI GCNGC 7 cut(s) 16, 19, 22, 73, 342, 624, 939
Bme1390I CCNGG 2 cut(s) 483, 660
BmrFI CCNGG 2 cut(s) 483, 660
BpiI GAAGAC 2 cut(s) 269, 1160
BplI GAGNNNNNCTC 2 cut(s) 406, 438
BpmI CTGGAG 1 cut(s) 1004
Bpu14I TTCGAA 1 cut(s) 243
BpuEI CTTGAG 1 cut(s) 401
BpuMI CCSGG 1 cut(s) 660
BsaAI YACGTR 1 cut(s) 763
BsaBI GATNNNNATC 1 cut(s) 106
BsaI GGTCTC 2 cut(s) 250, 279
BsaJI CCNNGG 5 cut(s) 271, 289, 335, 658, 1001
BsaXI ACNNNNNCTCC 2 cut(s) 830, 860
Bsc4I CCNNNNNNNGG 1 cut(s) 435
Bse8I GATNNNNATC 1 cut(s) 106
BseBI CCWGG 1 cut(s) 483
BseDI CCNNGG 5 cut(s) 271, 289, 335, 658, 1001
BseGI GGATG 1 cut(s) 82
BseJI GATNNNNATC 1 cut(s) 106
BseLI CCNNNNNNNGG 1 cut(s) 435
BseMII CTCAG 6 cut(s) 295, 348, 526, 596, 612, 638
BseRI GAGGAG 2 cut(s) 500, 851
BseSI GKGCMC 1 cut(s) 798
BseXI GCAGC 6 cut(s) 4, 26, 32, 58, 327, 949
BshFI GGCC 1 cut(s) 402
BsiHKAI GWGCWC 2 cut(s) 613, 798
BsiSI CCGG 1 cut(s) 660
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 1 cut(s) 435
BsmAI GTCTC 2 cut(s) 250, 279
BsmFI GGGAC 1 cut(s) 317
BsmI GAATGC 1 cut(s) 475
BsnI GGCC 1 cut(s) 402
Bso31I GGTCTC 2 cut(s) 250, 279
Bsp119I TTCGAA 1 cut(s) 243
Bsp1286I GDGCHC 2 cut(s) 613, 798
Bsp143I GATC 4 cut(s) 101, 363, 840, 993
Bsp19I CCATGG 1 cut(s) 289
BspACI CCGC 3 cut(s) 204, 623, 988
BspANI GGCC 1 cut(s) 402
BspCNI CTCAG 6 cut(s) 294, 349, 525, 597, 611, 639
BspMAI CTGCAG 1 cut(s) 22
BspPI GGATC 3 cut(s) 358, 835, 1001
BspT104I TTCGAA 1 cut(s) 243
BspTNI GGTCTC 2 cut(s) 250, 279
BsrBI CCGCTC 1 cut(s) 988
BssECI CCNNGG 5 cut(s) 271, 289, 335, 658, 1001
BssMI GATC 4 cut(s) 101, 363, 840, 993
BssSI CACGAG 1 cut(s) 412
BssT1I CCWWGG 4 cut(s) 271, 289, 335, 1001
Bst2BI CACGAG 1 cut(s) 412
Bst2UI CCWGG 1 cut(s) 483
Bst4CI ACNGT 2 cut(s) 120, 172
Bst6I CTCTTC 2 cut(s) 500, 828
BstBAI YACGTR 1 cut(s) 763
BstBI TTCGAA 1 cut(s) 243
BstC8I GCNNGC 4 cut(s) 460, 942, 1040, 1130
BstDEI CTNAG 9 cut(s) 228, 281, 357, 512, 598, 605, 647, 732, 977
BstDSI CCRYGG 1 cut(s) 289
BstF5I GGATG 1 cut(s) 82
BstKTI GATC 4 cut(s) 104, 366, 843, 996
BstMAI GTCTC 2 cut(s) 250, 279
BstMBI GATC 4 cut(s) 101, 363, 840, 993
BstMWI GCNNNNNNNGC 5 cut(s) 20, 29, 212, 408, 950
BstNI CCWGG 1 cut(s) 483
BstSCI CCNGG 2 cut(s) 481, 658
BstSFI CTRYAG 2 cut(s) 18, 433
BstSLI GKGCMC 1 cut(s) 798
BstV1I GCAGC 6 cut(s) 4, 26, 32, 58, 327, 949
BstV2I GAAGAC 2 cut(s) 269, 1160
BstX2I RGATCY 2 cut(s) 363, 840
BstYI RGATCY 2 cut(s) 363, 840
BsuRI GGCC 1 cut(s) 402
BtgI CCRYGG 1 cut(s) 289
BtsCI GGATG 1 cut(s) 82
BtsIMutI CAGTG 2 cut(s) 177, 520
Cac8I GCNNGC 4 cut(s) 460, 942, 1040, 1130
CaiI CAGNNNCTG 1 cut(s) 266
CspCI CAANNNNNGTGG 2 cut(s) 802, 837
CviAII CATG 3 cut(s) 192, 290, 789
DdeI CTNAG 9 cut(s) 228, 281, 357, 512, 598, 605, 647, 732, 977
DpnI GATC 4 cut(s) 103, 365, 842, 995
DpnII GATC 4 cut(s) 101, 363, 840, 993
Eam1104I CTCTTC 2 cut(s) 500, 828
EarI CTCTTC 2 cut(s) 500, 828
Eco130I CCWWGG 4 cut(s) 271, 289, 335, 1001
Eco147I AGGCCT 1 cut(s) 402
Eco31I GGTCTC 2 cut(s) 250, 279
Eco32I GATATC 2 cut(s) 959, 1147
Eco57I CTGAAG 4 cut(s) 9, 852, 1064, 1154
Eco72I CACGTG 1 cut(s) 763
EcoRII CCWGG 1 cut(s) 481
EcoRV GATATC 2 cut(s) 959, 1147
EcoT14I CCWWGG 4 cut(s) 271, 289, 335, 1001
ErhI CCWWGG 4 cut(s) 271, 289, 335, 1001
FaeI CATG 3 cut(s) 195, 293, 792
FaqI GGGAC 1 cut(s) 317
FatI CATG 3 cut(s) 191, 289, 788
Fnu4HI GCNGC 7 cut(s) 15, 18, 21, 72, 341, 623, 938
FokI GGATG 1 cut(s) 69
Fsp4HI GCNGC 7 cut(s) 15, 18, 21, 72, 341, 623, 938
FspBI CTAG 2 cut(s) 398, 476
GluI GCNGC 7 cut(s) 15, 18, 21, 72, 341, 623, 938
GsuI CTGGAG 1 cut(s) 1004
HaeIII GGCC 1 cut(s) 402
HapII CCGG 1 cut(s) 660
Hin1II CATG 3 cut(s) 195, 293, 792
HincII GTYRAC 1 cut(s) 741
HindII GTYRAC 1 cut(s) 741
HindIII AAGCTT 2 cut(s) 30, 238
HpaI GTTAAC 1 cut(s) 741
HpaII CCGG 1 cut(s) 660
HphI GGTGA 3 cut(s) 647, 769, 1042
Hpy166II GTNNAC 5 cut(s) 532, 741, 796, 811, 922
Hpy188I TCNGA 6 cut(s) 28, 115, 284, 307, 606, 886
Hpy188III TCNNGA 5 cut(s) 132, 451, 962, 983, 1172
Hpy8I GTNNAC 5 cut(s) 532, 741, 796, 811, 922
Hpy99I CGWCG 1 cut(s) 716
HpyAV CCTTC 3 cut(s) 152, 700, 1027
HpyCH4III ACNGT 2 cut(s) 120, 172
HpyCH4IV ACGT 3 cut(s) 544, 737, 762
HpyCH4V TGCA 5 cut(s) 14, 20, 574, 796, 944
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 29, 212, 408, 950
HpyF3I CTNAG 9 cut(s) 228, 281, 357, 512, 598, 605, 647, 732, 977
HpySE526I ACGT 3 cut(s) 544, 737, 762
Hsp92II CATG 3 cut(s) 195, 293, 792
KspAI GTTAAC 1 cut(s) 741
Kzo9I GATC 4 cut(s) 101, 363, 840, 993
LmnI GCTCC 1 cut(s) 985
Lsp1109I GCAGC 6 cut(s) 4, 26, 32, 58, 327, 949
MaeI CTAG 2 cut(s) 398, 476
MaeII ACGT 3 cut(s) 544, 737, 762
MaeIII GTNAC 2 cut(s) 653, 1108
MalI GATC 4 cut(s) 103, 365, 842, 995
MbiI CCGCTC 1 cut(s) 988
MboI GATC 4 cut(s) 101, 363, 840, 993
MboII GAAGA 8 cut(s) 269, 373, 478, 487, 845, 901, 1057, 1160
MflI RGATCY 2 cut(s) 363, 840
MhlI GDGCHC 2 cut(s) 613, 798
MluCI AATT 6 cut(s) 9, 37, 187, 800, 1160, 1187
MlyI GAGTC 4 cut(s) 672, 750, 1029, 1105
MnlI CCTC 7 cut(s) 521, 640, 799, 829, 984, 1143, 1186
MseI TTAA 5 cut(s) 186, 489, 690, 740, 1163
MslI CAYNNNNRTG 3 cut(s) 151, 547, 872
MspA1I CMGCKG 1 cut(s) 17
MspI CCGG 1 cut(s) 660
MspR9I CCNGG 2 cut(s) 483, 660
Mva1269I GAATGC 1 cut(s) 475
MvaI CCWGG 1 cut(s) 483
MwoI GCNNNNNNNGC 5 cut(s) 20, 29, 212, 408, 950
NciI CCSGG 1 cut(s) 660
NcoI CCATGG 1 cut(s) 289
NdeII GATC 4 cut(s) 101, 363, 840, 993
NlaIII CATG 3 cut(s) 195, 293, 792
NmuCI GTSAC 2 cut(s) 653, 1108
NspV TTCGAA 1 cut(s) 243
OliI CACNNNNGTG 1 cut(s) 547
PceI AGGCCT 1 cut(s) 402
PcsI WCGNNNNNNNCGW 2 cut(s) 303, 734
PctI GAATGC 1 cut(s) 475
PfeI GAWTC 6 cut(s) 128, 263, 294, 302, 439, 723
PkrI GCNGC 7 cut(s) 16, 19, 22, 73, 342, 624, 939
PleI GAGTC 4 cut(s) 671, 750, 1028, 1105
PmaCI CACGTG 1 cut(s) 763
PmlI CACGTG 1 cut(s) 763
PpsI GAGTC 4 cut(s) 671, 750, 1028, 1105
Ppu21I YACGTR 1 cut(s) 763
PsiI TTATAA 2 cut(s) 539, 1097
Psp6I CCWGG 1 cut(s) 481
PspCI CACGTG 1 cut(s) 763
PspGI CCWGG 1 cut(s) 481
PstI CTGCAG 1 cut(s) 22
PstNI CAGNNNCTG 1 cut(s) 266
PsuI RGATCY 2 cut(s) 363, 840
PvuII CAGCTG 1 cut(s) 17
RseI CAYNNNNRTG 3 cut(s) 151, 547, 872
SaqAI TTAA 5 cut(s) 186, 489, 690, 740, 1163
SatI GCNGC 7 cut(s) 15, 18, 21, 72, 341, 623, 938
Sau3AI GATC 4 cut(s) 101, 363, 840, 993
SchI GAGTC 4 cut(s) 672, 750, 1029, 1105
ScrFI CCNGG 2 cut(s) 483, 660
SduI GDGCHC 2 cut(s) 613, 798
SfcI CTRYAG 2 cut(s) 18, 433
SfuI TTCGAA 1 cut(s) 243
SmiMI CAYNNNNRTG 3 cut(s) 151, 547, 872
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
Sse9I AATT 6 cut(s) 9, 37, 187, 800, 1160, 1187
SseBI AGGCCT 1 cut(s) 402
SsiI CCGC 3 cut(s) 204, 623, 988
SspI AATATT 1 cut(s) 583
SspMI CTAG 2 cut(s) 398, 476
StuI AGGCCT 1 cut(s) 402
StyD4I CCNGG 2 cut(s) 481, 658
StyI CCWWGG 4 cut(s) 271, 289, 335, 1001
TaaI ACNGT 2 cut(s) 120, 172
TaiI ACGT 3 cut(s) 547, 740, 765
TaqI TCGA 2 cut(s) 243, 785
TasI AATT 6 cut(s) 9, 37, 187, 800, 1160, 1187
TauI GCSGC 1 cut(s) 625
TfiI GAWTC 6 cut(s) 128, 263, 294, 302, 439, 723
Tru1I TTAA 5 cut(s) 186, 489, 690, 740, 1163
Tru9I TTAA 5 cut(s) 186, 489, 690, 740, 1163
TscAI CASTG 2 cut(s) 177, 520
TseFI GTSAC 2 cut(s) 653, 1108
TseI GCWGC 6 cut(s) 14, 17, 20, 71, 340, 937
Tsp45I GTSAC 2 cut(s) 653, 1108
TspDTI ATGAA 4 cut(s) 17, 156, 180, 534
TspRI CASTG 2 cut(s) 177, 520
VneI GTGCAC 1 cut(s) 794
XapI RAATTY 1 cut(s) 37
XspI CTAG 2 cut(s) 398, 476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.