Rorug02G0385900
ERF Family

mTERF

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000263
Physical Location & Seq
Reverse (-)
49228385 .. 49232759
4375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0385900.1

Sequence Viewer

Length: 2004 bp
ATGGAGAGCTTCAAAGCCCCATTCAGGGGTATCGCAAACGATATTCGAGGAAGAGCAGCATGCTACAAGAAAGATTGGATTGGAGGCATTCGTTCAGGAATCGGGATATTGGCCCCAACTACCTACATCTTCTTTGCTTCAGCTCTTCCTGTTATAGCATTTGGGGAGCAACTGAGTAGAGATACAGATGGAAGCTTGAGCACGGTTGAAACATTGGCTTCTACAGCTATCTGTGGCATAATACACTCCATTCTGGGTGGGCAACCTCTATTGATTTTGGGAGTTGCAGAACCGACTATTATAATGTACACGTACTTGTATGACTTTGCAAAAGGAAAGGAAGGTCTGGGACGCGAACTATTTCTAGCTTGGGTTGGATGGGTTTGCGTCTGGACATCCCTTTTGCTCATTCTTCTGGCAATATTCAATGTTTGTGACATCATCAATAAGTTTACGAGGATTGCAGGGGAACTTTTTGGCATGTTGATAAATGTTCTGTTCATTCAGGAGGCTATCAAGGGAATAGTCAGTGAGTTCAAACTACAGAAAGGTGAAGATCCAAATGGGGGGACTTATCAACGTGAGTCAATGTACACAAATGGACTGCTGGGGGTCATATTTACTGTTGGTGTCCTCTATACTTCATTGAAGACCAGAAAAGCAAGATCATGGTGGTATGCAACAGGGTGGTTCAGAAGTTTCATTGCAGATTACGGGGTTCCTCTAATGGTAGTGTTGTGGACTGTTATATCATTCAGTGTACCACACAATATTGTTCCCTCACAAGTTCCTAGAAGGCTATATAGCCCTCTAGCATGGGATTCTGAATCTTTACACCATTGGTCTGTAATCAAGGATATGGGGAAGGTTTCTCCTGGATACATCTTTGCCGCTTTCATTCCTGCTCTGATGGTAGCGGGTCTCTACTTTTTTGACCATAGTGTTGCTGCACAAATGGCACAACAAAAGGAGTTCAATCTAAAGAAACCTTCTGCATACCATTATGATATTTTGCTGCTGGGATTTTTGACACTGCTTTGTGGATTGATTGGGCTTCCTCCTTGCAATGGTGTCCTGCCACAGGCACCCATGCACACTAAGAGCCTTGCAGTTCTTAAGAGGCAGTTGATTCGAAAGAAAATGGTAAAGAGTGCTAAAGAAAGCATAAAACAGAAAGCTAGCAATTCTGAAATCTATGGAAATATGCAAGCTGTGTTCATAGAGATGGACAACTCGACTGCAGATACTTCAGTAGTTACAGAGCTTGAAGACTTGAAGGAAGCAGTTATGAAAAGTGAACATGAAGGGGAGAATGCAAAAGATGCATTTGATCCTGAGAGGCACATTGATGCTTTCCTGCCTGTCCGGGTTAACGAGCAAAGAGTAAGCAATCTGTTGCAGTCACTTCTTGTAGCAGCATCAGTTTTTGCTATGCCAGCCATCAAGAAGATACCAACATCAGTTTTGTGGGGATACTTTGCTTACATGGCCATTGACAGTCTCCCGGGGAATCAATTCTGGGAAAGGTTGCTATTTCTCTTCATTGCGCCTAGCCGACGTTACAAGGTCTTGGAAGGGGTTCATGCTTCCTTTATGGAGTCAGTGCCATTCAAATACATTGCCATATTTACACTCTTTCAGCTTGTATACTTCCTGTTCTGCTTTGGTGTGACATGGATCCCCATAGCCGGCATTTTATTCCCCTTGCCGTTCTTCCTTCTCGTAATGATAAGACAGCACTTCCTCCCCAAATTCTTTCAACCATATCACTTGCAGGAGCTGGATTCAGCTGAATGGGAGGAAGTCACTGGCCCCCCGAGACGGTCTCTCAGCGTCTCTACAAGGGAATTGGAAACTGCAATCGAAGAAGGTGAAGTGGAGATGTGTGATGCTGAGATATTAGATGAGTTAACAACCAGCAGAGGGGAGCTGAAAATCAGAGCTAGCTTCAGTGAAGACAAACGTGGTCAGATTCACCCTCAAAATTTTGGCCAAACAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
mTERF

Protein Analysis

667

Amino Acids

74.97

Weight (kDa)

6.53

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HCO3_cotransp PF00955 7 - 183 1.3e-36 HCO3- transporter integral membrane domain
HCO3_cotransp PF00955 199 - 375 2e-26 HCO3- transporter integral membrane domain
HCO3_cotransp PF00955 455 - 597 1.3e-27 HCO3- transporter integral membrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000263)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21150 AT1G21150 AT1G21150
fragaria_vesca FvH4_4g17900 FvH4_6g26110 FvH4_6g33880 FvH4_6g33900 FvH4_6g34011 FvH4_6g34011 FvH4_6g34011 FvH4_6g34011 FvH4_6g34030 FvH4_6g34040 FvH4_6g34070 FvH4_6g34070 FvH4_7g12830
malus_domestica MD09G1189800.v1.1 MD09G1189900.v1.1 MD09G1190000.v1.1 MD14G1088800.v1.1 MD14G1088900.v1.1 MD17G1172900.v1.1
pyrus_communis pycom07g03460 pycom09g10650 pycom14g07860
rosa_chinensis RchiOBHm_Chr1g0351891 RchiOBHm_Chr1g0351901 RchiOBHm_Chr2g0143771 RchiOBHm_Chr2g0143861 RchiOBHm_Chr2g0143881 RchiOBHm_Chr2g0143941 RchiOBHm_Chr2g0143951 RchiOBHm_Chr2g0144081 RchiOBHm_Chr2g0144091 RchiOBHm_Chr2g0144211 RchiOBHm_Chr2g0144231 RchiOBHm_Chr2g0144241 RchiOBHm_Chr2g0144291 RchiOBHm_Chr2g0144301 RchiOBHm_Chr2g0144311 RchiOBHm_Chr2g0144331 RchiOBHm_Chr2g0144341 RchiOBHm_Chr4g0422021 RchiOBHm_Chr4g0422031
rosa_laevigata RLG00000007639 RLG00000020063 RLG00000020071 RLG00000020072 RLG00000020074
rosa_multiflora Rmu_co8214640.1_g000001 Rmu_co8471033.1_g000001 Rmu_sc0000789.1_g000002 Rmu_sc0001321.1_g000001 Rmu_sc0004340.1_g000001 Rmu_sc0004897.1_g000001 Rmu_sc0007105.1_g000005 Rmu_sc0009498.1_g000001 Rmu_sc0009498.1_g000002 Rmu_sc0019136.1_g000001 Rmu_sc0020327.1_g000002 Rmu_sc0020327.1_g000003 Rmu_sc0022905.1_g000001 Rmu_sc0032602.1_g000003 Rmu_sc0032602.1_g000004
rosa_roxburghii Rroxscaffold_2G00101380 Rroxscaffold_2G00101390 Rroxscaffold_2G00101400 Rroxscaffold_2G00101410 Rroxscaffold_2G00101480 Rroxscaffold_2G00101490 Rroxscaffold_4G00303470 Rroxscaffold_5G00364130 Rroxscaffold_5G00364150
rosa_rugosa Rorug01G0222600 Rorug02G0384700 Rorug02G0384800 Rorug02G0385800 Rorug02G0385900 Rorug02G0386000 Rorug02G0386000 Rorug02G0386100 Rorug04G0176700 Rorug04G0176800.1
rosa_samantha Rh1AG236500 Rh1AG236600 Rh1BG206900 Rh1CG221000 Rh1CG221100 Rh2BG444800 Rh2BG444900 Rh2BG446600 Rh2BG446700 Rh2BG447600 Rh2BG448100 Rh2BG448400 Rh2BG448500 Rh2BG448700 Rh2BG448800 Rh2CG423500 Rh2CG423600 Rh2CG424800 Rh2CG424900 Rh2CG425100 Rh2CG425200 Rh2DG455200 Rh2DG455300 Rh2DG456900 Rh2DG457000 Rh2DG457100 Rh2DG457600 Rh2DG457900 Rh2DG458000 Rh2DG458300 Rh2DG458400 Rh4AG236100 Rh4AG236200 Rh4BG239200 Rh4CG250900 Rh4CG251100
rosa_wichuraiana Rw0G000400 Rw0G015990 Rw0G017200 Rw1G020580 Rw2G033310 Rw2G035630 Rw2G035640 Rw2G035790 Rw2G035800 Rw2G035840 Rw2G036160 Rw4G019830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 1084
AccI GTMKAC 1 cut(s) 1647
AccII CGCG 1 cut(s) 354
AciI CCGC 2 cut(s) 891, 917
AclWI GGATC 4 cut(s) 551, 1325, 1672, 1685
AcoI YGGCCR 2 cut(s) 1488, 1990
AcsI RAATTY 2 cut(s) 1751, 1984
AcuI CTGAAG 3 cut(s) 123, 1233, 1933
AfaI GTAC 4 cut(s) 308, 314, 593, 762
AfiI CCNNNNNNNGG 9 cut(s) 24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
AflII CTTAAG 1 cut(s) 1115
AflIII ACRYGT 1 cut(s) 309
AjnI CCWGG 1 cut(s) 874
Alw21I GWGCWC 1 cut(s) 203
Alw26I GTCTC 5 cut(s) 926, 1505, 1813, 1830, 1840
AlwI GGATC 4 cut(s) 551, 1325, 1672, 1685
AlwNI CAGNNNCTG 1 cut(s) 1780
Ama87I CYCGRG 2 cut(s) 1504, 1816
AoxI GGCC 4 cut(s) 111, 1488, 1810, 1990
ApeKI GCWGC 4 cut(s) 56, 947, 1015, 1415
ApoI RAATTY 2 cut(s) 1751, 1984
ArsI GACNNNNNNTTYG 2 cut(s) 385, 417
Asp700I GAANNNNTTC 3 cut(s) 360, 1514, 1578
AspLEI GCGC 1 cut(s) 1549
AspS9I GGNCC 2 cut(s) 112, 1811
AsuC2I CCSGG 3 cut(s) 1367, 1505, 1506
AsuHPI GGTGA 3 cut(s) 563, 1883, 1967
AsuII TTCGAA 1 cut(s) 1132
AsuNHI GCTAGC 2 cut(s) 1178, 1943
AvaI CYCGRG 2 cut(s) 1504, 1816
BaeI ACNNNNGTAYC 2 cut(s) 1236, 1269
BalI TGGCCA 2 cut(s) 1490, 1992
BamHI GGATCC 1 cut(s) 1677
BanI GGYRCC 1 cut(s) 1084
BbsI GAAGAC 3 cut(s) 656, 1275, 1962
Bbv12I GWGCWC 1 cut(s) 203
BbvI GCAGC 4 cut(s) 68, 934, 1002, 1427
BccI CCATC 5 cut(s) 182, 372, 904, 1219, 1448
BceAI ACGGC 1 cut(s) 1693
BcgI CGANNNNNNTGC 2 cut(s) 1112, 1146
BciT130I CCWGG 1 cut(s) 876
BciVI GTATCC 2 cut(s) 872, 1466
BcnI CCSGG 3 cut(s) 1367, 1505, 1506
BcoDI GTCTC 5 cut(s) 926, 1505, 1813, 1830, 1840
BfaI CTAG 6 cut(s) 365, 792, 812, 1179, 1551, 1944
BfmI CTRYAG 3 cut(s) 222, 542, 1239
BfrI CTTAAG 1 cut(s) 1115
BfuI GTATCC 2 cut(s) 872, 1466
BisI GCNGC 5 cut(s) 57, 891, 948, 1016, 1416
BlsI GCNGC 5 cut(s) 58, 892, 949, 1017, 1417
Bme1390I CCNGG 4 cut(s) 876, 1367, 1505, 1506
BmeT110I CYCGRG 2 cut(s) 1504, 1816
BmgT120I GGNCC 2 cut(s) 112, 1811
BmiI GGNNCC 5 cut(s) 114, 720, 1086, 1679, 1813
BmrFI CCNGG 4 cut(s) 876, 1367, 1505, 1506
BmsI GCATC 4 cut(s) 1312, 1339, 1427, 1879
BmtI GCTAGC 2 cut(s) 1182, 1947
BpiI GAAGAC 3 cut(s) 656, 1275, 1962
BplI GAGNNNNNCTC 2 cut(s) 1810, 1842
Bpu14I TTCGAA 1 cut(s) 1132
BpuEI CTTGAG 1 cut(s) 217
BpuMI CCSGG 3 cut(s) 1367, 1505, 1506
BsaAI YACGTR 1 cut(s) 312
BsaI GGTCTC 2 cut(s) 926, 1830
BsaJI CCNNGG 2 cut(s) 1504, 1505
Bsc4I CCNNNNNNNGG 9 cut(s) 24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
Bse118I RCCGGY 1 cut(s) 1688
Bse1I ACTGG 1 cut(s) 1813
Bse3DI GCAATG 4 cut(s) 702, 1072, 1542, 1617
BseBI CCWGG 1 cut(s) 876
BseDI CCNNGG 2 cut(s) 1504, 1505
BseGI GGATG 2 cut(s) 383, 395
BseLI CCNNNNNNNGG 9 cut(s) 24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
BseMI GCAATG 4 cut(s) 702, 1072, 1542, 1617
BseMII CTCAG 4 cut(s) 164, 1326, 1843, 1884
BseNI ACTGG 1 cut(s) 1813
BseXI GCAGC 4 cut(s) 68, 934, 1002, 1427
BseYI CCCAGC 2 cut(s) 607, 1018
BsgI GTGCAG 1 cut(s) 933
Bsh1236I CGCG 1 cut(s) 354
BshFI GGCC 4 cut(s) 113, 1490, 1812, 1992
BshNI GGYRCC 1 cut(s) 1084
BsiHKAI GWGCWC 1 cut(s) 203
BsiHKCI CYCGRG 2 cut(s) 1504, 1816
BsiSI CCGG 3 cut(s) 1366, 1505, 1689
BslFI GGGAC 2 cut(s) 363, 583
BslI CCNNNNNNNGG 9 cut(s) 24, 25, 26, 566, 1067, 1081, 1688, 1821, 1923
BsmAI GTCTC 5 cut(s) 926, 1505, 1813, 1830, 1840
BsmBI CGTCTC 2 cut(s) 1813, 1840
BsmFI GGGAC 2 cut(s) 363, 583
BsmI GAATGC 2 cut(s) 87, 1318
BsnI GGCC 4 cut(s) 113, 1490, 1812, 1992
Bso31I GGTCTC 2 cut(s) 926, 1830
BsoBI CYCGRG 2 cut(s) 1504, 1816
Bsp119I TTCGAA 1 cut(s) 1132
Bsp1286I GDGCHC 1 cut(s) 203
Bsp1407I TGTACA 2 cut(s) 306, 591
Bsp143I GATC 4 cut(s) 556, 665, 1330, 1677
BspACI CCGC 2 cut(s) 891, 917
BspANI GGCC 4 cut(s) 113, 1490, 1812, 1992
BspCNI CTCAG 4 cut(s) 165, 1327, 1842, 1885
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 5 cut(s) 114, 720, 1086, 1679, 1813
BspMAI CTGCAG 1 cut(s) 1243
BspOI GCTAGC 2 cut(s) 1182, 1947
BspPI GGATC 4 cut(s) 551, 1325, 1672, 1685
BspQI GCTCTTC 2 cut(s) 46, 150
BspT104I TTCGAA 1 cut(s) 1132
BspT107I GGYRCC 1 cut(s) 1084
BspTI CTTAAG 1 cut(s) 1115
BspTNI GGTCTC 2 cut(s) 926, 1830
BsrDI GCAATG 4 cut(s) 702, 1072, 1542, 1617
BsrFI RCCGGY 1 cut(s) 1688
BsrGI TGTACA 2 cut(s) 306, 591
BsrI ACTGG 1 cut(s) 1813
BssAI RCCGGY 1 cut(s) 1688
BssECI CCNNGG 2 cut(s) 1504, 1505
BssMI GATC 4 cut(s) 556, 665, 1330, 1677
BssNAI GTATAC 1 cut(s) 1648
Bst1107I GTATAC 1 cut(s) 1648
Bst2UI CCWGG 1 cut(s) 876
Bst4CI ACNGT 5 cut(s) 205, 625, 745, 1499, 1824
Bst6I CTCTTC 3 cut(s) 46, 150, 1544
BstAFI CTTAAG 1 cut(s) 1115
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstAUI TGTACA 2 cut(s) 306, 591
BstBAI YACGTR 1 cut(s) 312
BstBI TTCGAA 1 cut(s) 1132
BstC8I GCNNGC 6 cut(s) 61, 1180, 1209, 1437, 1690, 1945
BstDEI CTNAG 5 cut(s) 173, 1098, 1335, 1829, 1893
BstENI CCTNNNNNAGG 1 cut(s) 1079
BstF5I GGATG 2 cut(s) 383, 395
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 1 cut(s) 1549
BstKTI GATC 4 cut(s) 559, 668, 1333, 1680
BstMAI GTCTC 5 cut(s) 926, 1505, 1813, 1830, 1840
BstMBI GATC 4 cut(s) 556, 665, 1330, 1677
BstMWI GCNNNNNNNGC 5 cut(s) 224, 956, 1322, 1436, 1487
BstNI CCWGG 1 cut(s) 876
BstNSI RCATGY 2 cut(s) 63, 484
BstSCI CCNGG 4 cut(s) 874, 1365, 1503, 1504
BstSFI CTRYAG 3 cut(s) 222, 542, 1239
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 4 cut(s) 68, 934, 1002, 1427
BstV2I GAAGAC 3 cut(s) 656, 1275, 1962
BstX2I RGATCY 2 cut(s) 556, 1677
BstYI RGATCY 2 cut(s) 556, 1677
BstZ17I GTATAC 1 cut(s) 1648
BsuI GTATCC 2 cut(s) 872, 1466
BsuRI GGCC 4 cut(s) 113, 1490, 1812, 1992
BtsCI GGATG 2 cut(s) 383, 395
BtsI GCAGTG 1 cut(s) 1031
BtsIMutI CAGTG 6 cut(s) 535, 763, 1031, 1608, 1806, 1957
Cac8I GCNNGC 6 cut(s) 61, 1180, 1209, 1437, 1690, 1945
CaiI CAGNNNCTG 1 cut(s) 1780
CfoI GCGC 1 cut(s) 1549
Cfr10I RCCGGY 1 cut(s) 1688
Cfr13I GGNCC 2 cut(s) 112, 1811
Cfr9I CCCGGG 1 cut(s) 1504
CseI GACGC 3 cut(s) 360, 376, 1822
Csp6I GTAC 4 cut(s) 307, 313, 592, 761
CviAII CATG 9 cut(s) 60, 481, 669, 816, 1090, 1301, 1486, 1583, 1674
CviQI GTAC 4 cut(s) 307, 313, 592, 761
DdeI CTNAG 5 cut(s) 173, 1098, 1335, 1829, 1893
DpnI GATC 4 cut(s) 558, 667, 1332, 1679
DpnII GATC 4 cut(s) 556, 665, 1330, 1677
EaeI YGGCCR 2 cut(s) 1488, 1990
Eam1104I CTCTTC 3 cut(s) 46, 150, 1544
EarI CTCTTC 3 cut(s) 46, 150, 1544
Eco31I GGTCTC 2 cut(s) 926, 1830
Eco57I CTGAAG 3 cut(s) 123, 1233, 1933
Eco88I CYCGRG 2 cut(s) 1504, 1816
EcoNI CCTNNNNNAGG 1 cut(s) 1079
EcoRII CCWGG 1 cut(s) 874
EcoT22I ATGCAT 1 cut(s) 1327
Esp3I CGTCTC 2 cut(s) 1813, 1840
FaeI CATG 9 cut(s) 63, 484, 672, 819, 1093, 1304, 1489, 1586, 1677
FaqI GGGAC 2 cut(s) 363, 583
FatI CATG 9 cut(s) 59, 480, 668, 815, 1089, 1300, 1485, 1582, 1673
FauI CCCGC 1 cut(s) 910
FblI GTMKAC 1 cut(s) 1647
Fnu4HI GCNGC 5 cut(s) 57, 891, 948, 1016, 1416
FokI GGATG 2 cut(s) 382, 390
Fsp4HI GCNGC 5 cut(s) 57, 891, 948, 1016, 1416
FspBI CTAG 6 cut(s) 365, 792, 812, 1179, 1551, 1944
GlaI GCGC 1 cut(s) 1548
GluI GCNGC 5 cut(s) 57, 891, 948, 1016, 1416
GsaI CCCAGC 2 cut(s) 611, 1022
HaeIII GGCC 4 cut(s) 113, 1490, 1812, 1992
HapII CCGG 3 cut(s) 1366, 1505, 1689
HgaI GACGC 3 cut(s) 360, 376, 1822
HhaI GCGC 1 cut(s) 1549
Hin1II CATG 9 cut(s) 63, 484, 672, 819, 1093, 1304, 1489, 1586, 1677
Hin6I GCGC 1 cut(s) 1547
HinP1I GCGC 1 cut(s) 1547
HincII GTYRAC 2 cut(s) 1372, 1911
HindII GTYRAC 2 cut(s) 1372, 1911
HindIII AAGCTT 1 cut(s) 193
HinfI GANTC 9 cut(s) 99, 584, 821, 827, 1129, 1510, 1598, 1784, 1972
HpaI GTTAAC 2 cut(s) 1372, 1911
HpaII CCGG 3 cut(s) 1366, 1505, 1689
HphI GGTGA 3 cut(s) 563, 1883, 1967
Hpy166II GTNNAC 9 cut(s) 309, 453, 594, 741, 761, 1298, 1372, 1648, 1911
Hpy188I TCNGA 6 cut(s) 695, 826, 909, 1189, 1940, 1971
Hpy188III TCNNGA 6 cut(s) 96, 103, 391, 506, 1334, 1444
Hpy8I GTNNAC 9 cut(s) 309, 453, 594, 741, 761, 1298, 1372, 1648, 1911
Hpy99I CGWCG 1 cut(s) 1560
HpyAV CCTTC 9 cut(s) 335, 789, 859, 999, 1270, 1298, 1568, 1727, 1862
HpyCH4III ACNGT 5 cut(s) 205, 625, 745, 1499, 1824
HpyCH4IV ACGT 4 cut(s) 311, 580, 1558, 1963
HpyF10VI GCNNNNNNNGC 5 cut(s) 224, 956, 1322, 1436, 1487
HpyF3I CTNAG 5 cut(s) 173, 1098, 1335, 1829, 1893
HpySE526I ACGT 4 cut(s) 311, 580, 1558, 1963
Hsp92II CATG 9 cut(s) 63, 484, 672, 819, 1093, 1304, 1489, 1586, 1677
HspAI GCGC 1 cut(s) 1547
KroI GCCGGC 1 cut(s) 1688
KroNI GCCGGC 1 cut(s) 1690
KspAI GTTAAC 2 cut(s) 1372, 1911
Kzo9I GATC 4 cut(s) 556, 665, 1330, 1677
LguI GCTCTTC 2 cut(s) 46, 150
LmnI GCTCC 3 cut(s) 166, 1777, 1927
Lsp1109I GCAGC 4 cut(s) 68, 934, 1002, 1427
LweI GCATC 4 cut(s) 1312, 1339, 1427, 1879
MaeI CTAG 6 cut(s) 365, 792, 812, 1179, 1551, 1944
MaeII ACGT 4 cut(s) 311, 580, 1558, 1963
MaeIII GTNAC 6 cut(s) 434, 1255, 1401, 1559, 1669, 1804
MalI GATC 4 cut(s) 558, 667, 1332, 1679
MboI GATC 4 cut(s) 556, 665, 1330, 1677
MflI RGATCY 2 cut(s) 556, 1677
MhlI GDGCHC 1 cut(s) 203
MlsI TGGCCA 2 cut(s) 1490, 1992
MluCI AATT 5 cut(s) 1183, 1514, 1751, 1847, 1984
MluNI TGGCCA 2 cut(s) 1490, 1992
MlyI GAGTC 2 cut(s) 593, 1607
MmeI TCCRAC 1 cut(s) 355
Mox20I TGGCCA 2 cut(s) 1490, 1992
Mph1103I ATGCAT 1 cut(s) 1327
MroNI GCCGGC 1 cut(s) 1688
MroXI GAANNNNTTC 3 cut(s) 360, 1514, 1578
MscI TGGCCA 2 cut(s) 1490, 1992
MseI TTAA 3 cut(s) 1116, 1371, 1910
MslI CAYNNNNRTG 2 cut(s) 1223, 1347
Msp20I TGGCCA 2 cut(s) 1490, 1992
MspA1I CMGCKG 1 cut(s) 1790
MspCI CTTAAG 1 cut(s) 1115
MspI CCGG 3 cut(s) 1366, 1505, 1689
MspR9I CCNGG 4 cut(s) 876, 1367, 1505, 1506
Mva1269I GAATGC 2 cut(s) 87, 1318
MvaI CCWGG 1 cut(s) 876
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 5 cut(s) 224, 956, 1322, 1436, 1487
NaeI GCCGGC 1 cut(s) 1690
NciI CCSGG 3 cut(s) 1367, 1505, 1506
NdeII GATC 4 cut(s) 556, 665, 1330, 1677
NgoMIV GCCGGC 1 cut(s) 1688
NheI GCTAGC 2 cut(s) 1178, 1943
NlaIII CATG 9 cut(s) 63, 484, 672, 819, 1093, 1304, 1489, 1586, 1677
NlaIV GGNNCC 5 cut(s) 114, 720, 1086, 1679, 1813
NmuCI GTSAC 4 cut(s) 434, 1401, 1669, 1804
NsiI ATGCAT 1 cut(s) 1327
NspI RCATGY 2 cut(s) 63, 484
NspV TTCGAA 1 cut(s) 1132
PaeI GCATGC 1 cut(s) 63
PciSI GCTCTTC 2 cut(s) 46, 150
PctI GAATGC 2 cut(s) 87, 1318
PdiI GCCGGC 1 cut(s) 1690
PdmI GAANNNNTTC 3 cut(s) 360, 1514, 1578
PfeI GAWTC 7 cut(s) 99, 821, 827, 1129, 1510, 1784, 1972
PfoI TCCNGGA 1 cut(s) 874
PkrI GCNGC 5 cut(s) 58, 892, 949, 1017, 1417
PleI GAGTC 2 cut(s) 592, 1606
PpsI GAGTC 2 cut(s) 592, 1606
Ppu21I YACGTR 1 cut(s) 312
PsiI TTATAA 1 cut(s) 302
Psp6I CCWGG 1 cut(s) 874
PspFI CCCAGC 2 cut(s) 607, 1018
PspGI CCWGG 1 cut(s) 874
PspN4I GGNNCC 5 cut(s) 114, 720, 1086, 1679, 1813
PspPI GGNCC 2 cut(s) 112, 1811
PstI CTGCAG 1 cut(s) 1243
PstNI CAGNNNCTG 1 cut(s) 1780
PsuI RGATCY 2 cut(s) 556, 1677
PvuII CAGCTG 1 cut(s) 1790
RsaI GTAC 4 cut(s) 308, 314, 593, 762
RsaNI GTAC 4 cut(s) 307, 313, 592, 761
RseI CAYNNNNRTG 2 cut(s) 1223, 1347
SapI GCTCTTC 2 cut(s) 46, 150
SaqAI TTAA 3 cut(s) 1116, 1371, 1910
SatI GCNGC 5 cut(s) 57, 891, 948, 1016, 1416
Sau3AI GATC 4 cut(s) 556, 665, 1330, 1677
Sau96I GGNCC 2 cut(s) 112, 1811
SchI GAGTC 2 cut(s) 593, 1607
ScrFI CCNGG 4 cut(s) 876, 1367, 1505, 1506
SduI GDGCHC 1 cut(s) 203
SfaNI GCATC 4 cut(s) 1312, 1339, 1427, 1879
SfcI CTRYAG 3 cut(s) 222, 542, 1239
SfuI TTCGAA 1 cut(s) 1132
SmaI CCCGGG 1 cut(s) 1506
SmiMI CAYNNNNRTG 2 cut(s) 1223, 1347
SmlI CTYRAG 2 cut(s) 196, 1115
SmoI CTYRAG 2 cut(s) 196, 1115
SphI GCATGC 1 cut(s) 63
Sse9I AATT 5 cut(s) 1183, 1514, 1751, 1847, 1984
SsiI CCGC 2 cut(s) 891, 917
SspI AATATT 2 cut(s) 423, 772
SspMI CTAG 6 cut(s) 365, 792, 812, 1179, 1551, 1944
StyD4I CCNGG 4 cut(s) 874, 1365, 1503, 1504
TaaI ACNGT 5 cut(s) 205, 625, 745, 1499, 1824
TaiI ACGT 4 cut(s) 314, 583, 1561, 1966
TaqI TCGA 4 cut(s) 46, 1132, 1235, 1863
TasI AATT 5 cut(s) 1183, 1514, 1751, 1847, 1984
TatI WGTACW 2 cut(s) 306, 591
TauI GCSGC 1 cut(s) 893
TfiI GAWTC 7 cut(s) 99, 821, 827, 1129, 1510, 1784, 1972
Tru1I TTAA 3 cut(s) 1116, 1371, 1910
Tru9I TTAA 3 cut(s) 1116, 1371, 1910
TscAI CASTG 6 cut(s) 535, 763, 1038, 1608, 1813, 1957
TseFI GTSAC 4 cut(s) 434, 1401, 1669, 1804
TseI GCWGC 4 cut(s) 56, 947, 1015, 1415
Tsp45I GTSAC 4 cut(s) 434, 1401, 1669, 1804
TspDTI ATGAA 9 cut(s) 490, 633, 691, 886, 1207, 1304, 1317, 1531, 1571
TspMI CCCGGG 1 cut(s) 1504
TspRI CASTG 6 cut(s) 535, 763, 1038, 1608, 1813, 1957
Vha464I CTTAAG 1 cut(s) 1115
XagI CCTNNNNNAGG 1 cut(s) 1079
XapI RAATTY 2 cut(s) 1751, 1984
XceI RCATGY 2 cut(s) 63, 484
XmaI CCCGGG 1 cut(s) 1504
XmiI GTMKAC 1 cut(s) 1647
XmnI GAANNNNTTC 3 cut(s) 360, 1514, 1578
XspI CTAG 6 cut(s) 365, 792, 812, 1179, 1551, 1944
Zsp2I ATGCAT 1 cut(s) 1327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.