FvH4_3g11750

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000360
Physical Location & Seq
Forward (+)
6937903 .. 6940623
2721 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11750.t1

Sequence Viewer

Length: 1752 bp
ATGTCTCGACAGTATAGTTTACGATCTCAGGGTCCATCTTCTCATAACATTTGCTCCATCTGCTGGAGTGACTTGACAACAGGGCAAGGCCAAGCCATATTCACTGCTGATTGCTCACACTCGTTCCACTACCCTTGCATTGCCAACAATGTCCACCATGGAAATCTTTGCTGCCCTGCCTGCCGAGCCAAATGGGATAAAAGTAAATTACCTTTCCAGGTTCCTCCTCTTCAACAAAACAAGGCTAAACATGGCTTTGACGATGATGAACCTCTCTCGTCCGCCGCACTCTCTCAATCTTCTGGCCCCCACAATGTAACAATCAAGACTTATACAGAGACCTCTGCTATCCCTGCTGCCGATTCACGCCCACAATATCCTGTTCTAGTCAGCATTTGTGCGCCACCTCTTCAGGATCCTGATAGTGAAGCCCGTACACCAATTGACCTTGTAACAGTTCTGGATGTAAGCGGCAGCATGAATGGCCAAAAGCTTGACCTTGTCAAGCAAGCTGTCAAGTTTGTCATAGAAAACATGGGGTCGTCGGATAGACTTTCTATAGTTTCATTCTCAAATAGTTCTAGAAGAGTCCTTCCTCTTCGGAGAATGACAATTGATGGCCGTGAAAGTGCAATCCAAGCTGTTGAATCTCTCGAAGCAGGCGGTGGAACTGACATTGCGGAAGGACTCAAGAAAGGAGCTCATATCCTTGAGGAACGTAGGGAAAGGAACCCAGTTGCTAGTATCATCCTCCTATCAGATGGCCAAGATAACTACAGTCGCGTCCCAAGCCAAATGCTGAAGAAATTGCCTGCTTCAGTTCGTTCTAGTGACATGCAACATGAAATCCCAGTCCACACATTTGGGTTTGGCAATGACCATGATGCCAAAATTATGCATGCTATTTCTGATGCATCAGGGGGAACGTTTTCGTACATTGAATCAGTTGGCATAATACAAGACGCCTTTGCTCTATGCATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAACTTCGCCTCACAGTGAGGTCAGCATCACCTGGAGTAGTGAAGATTGTGTCAATACCATCCGGGAGATATGTCAGTCTGATTTCTGATGAGCAAGGTGTAGTTGATGTTGGGAATATGTATGCAGAAGAGGAGAAACAGTTTCTGGTGTACCTCTCAGTTCCACTATCCTCAGCTCCAAATACTAAGACGTCTTTGTTGGACGTTTTATGCGTGTACAAAGATCTTGGTTTGGATGAGTTTATCCCGGTCCAAGGTGAAAGAGTAGAGATATCGAGGCCTGAGTTTTGTTCTCCTGCAGAATTAGCAGTGTCTATGGATGTTGATCGGCAGCGGAACAGACTTTTGGTGGCTGATGCTATTGGAGAAGCACAAAGGTTGGCTGAATTGGGAAATCTGGAGGCTGCGCGTGCAGTTTTGACTCAGCGAAGAGAAACTCTATTGACATCAACAGCAGCCAAAGCTGGGGATGATGTTAGTCATTTGTTTGAAGCTGAGCTTAAAGATATCATGGATAAGATGGCAAGTATGAACTTGTATGAACAAGCGGGGCGTGCTTACGCTCTCTCAGGGATGAGTTCCCATGGAAGGCAGAGGGCCTCAGCTAGGGGTGCTGCAGCAGGCTCGTGCCTGGCCGCAAATGGTCCTCGGAAGCAACTTGCTACTCAAGCAGCGCGTAAGTCTACTTATGAAACATCCGCTATGGTTAGGATGGTAAGAAAATCACAGAACAAGAGGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

584

Amino Acids

63.13

Weight (kDa)

6.71

Isoelectric Point (pI)

50.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 17 - 62 8e-06 Ring finger domain
zf-RING_11 PF17123 18 - 47 2.6e-09 RING-like zinc finger
VWA_CoxE PF05762 145 - 276 3.6e-07 VWA domain containing CoxE-like protein
VWA PF00092 149 - 315 3e-24 von Willebrand factor type A domain
VWA_3 PF13768 149 - 310 2.9e-19 von Willebrand factor type A domain
VWA_2 PF13519 150 - 256 4.1e-19 von Willebrand factor type A domain
Vwaint PF14624 500 - 579 6.9e-11 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1202
AccB7I CCANNNNNTGG 1 cut(s) 63
AccI GTMKAC 1 cut(s) 1691
AccII CGCG 3 cut(s) 783, 1417, 1684
AciI CCGC 9 cut(s) 282, 285, 471, 663, 680, 1342, 1556, 1644, 1707
AclI AACGTT 1 cut(s) 926
AclWI GGATC 2 cut(s) 410, 423
AcoI YGGCCR 4 cut(s) 484, 619, 763, 1641
AcuI CTGAAG 3 cut(s) 395, 801, 821
AcyI GRCGYC 2 cut(s) 963, 1199
AfaI GTAC 4 cut(s) 436, 935, 1160, 1226
AfiI CCNNNNNNNGG 5 cut(s) 63, 1262, 1473, 1596, 1614
AgsI TTSAA 4 cut(s) 233, 647, 941, 1499
AjnI CCWGG 3 cut(s) 216, 1039, 1638
AjuI GAANNNNNNNTTGG 2 cut(s) 1337, 1369
AluBI AGCT 9 cut(s) 493, 512, 641, 701, 1184, 1472, 1502, 1507, 1613
AluI AGCT 9 cut(s) 493, 512, 641, 701, 1184, 1472, 1502, 1507, 1613
Alw21I GWGCWC 1 cut(s) 703
Alw26I GTCTC 2 cut(s) 9, 332
AlwI GGATC 2 cut(s) 410, 423
AlwNI CAGNNNCTG 1 cut(s) 1153
AoxI GGCC 8 cut(s) 88, 304, 484, 619, 763, 1286, 1605, 1641
ApeKI GCWGC 9 cut(s) 171, 356, 474, 1339, 1412, 1463, 1622, 1625, 1679
Asp700I GAANNNNTTC 1 cut(s) 928
AspLEI GCGC 3 cut(s) 403, 1417, 1684
AspS9I GGNCC 5 cut(s) 32, 305, 1258, 1605, 1652
AsuC2I CCSGG 2 cut(s) 1072, 1256
AsuHPI GGTGA 2 cut(s) 1029, 1277
AvaII GGWCC 3 cut(s) 32, 1258, 1652
BalI TGGCCA 2 cut(s) 486, 765
BamHI GGATCC 1 cut(s) 415
BanII GRGCYC 1 cut(s) 703
BauI CACGAG 1 cut(s) 1633
BbsI GAAGAC 1 cut(s) 980
Bbv12I GWGCWC 1 cut(s) 703
BbvCI CCTCAGC 2 cut(s) 1180, 1609
BbvI GCAGC 9 cut(s) 158, 343, 486, 1351, 1399, 1475, 1609, 1637, 1691
BccI CCATC 7 cut(s) 43, 65, 611, 755, 1075, 1522, 1714
BceAI ACGGC 1 cut(s) 606
BcgI CGANNNNNNTGC 2 cut(s) 1614, 1648
BciT130I CCWGG 3 cut(s) 218, 1041, 1640
BcnI CCSGG 2 cut(s) 1072, 1256
BcoDI GTCTC 2 cut(s) 9, 332
BfaI CTAG 5 cut(s) 386, 582, 741, 828, 1614
BfmI CTRYAG 4 cut(s) 558, 775, 1305, 1623
BglII AGATCT 1 cut(s) 1231
BlpI GCTNAGC 1 cut(s) 1503
Bme1390I CCNGG 5 cut(s) 218, 1041, 1072, 1256, 1640
Bme18I GGWCC 3 cut(s) 32, 1258, 1652
BmgT120I GGNCC 5 cut(s) 32, 305, 1258, 1605, 1652
BmiI GGNNCC 5 cut(s) 33, 222, 307, 417, 731
BmrFI CCNGG 5 cut(s) 218, 1041, 1072, 1256, 1640
BmrI ACTGGG 2 cut(s) 728, 845
BmsI GCATC 5 cut(s) 874, 901, 923, 1043, 1354
BmuI ACTGGG 2 cut(s) 728, 845
BpiI GAAGAC 1 cut(s) 980
BpmI CTGGAG 3 cut(s) 85, 1062, 1427
Bpu10I CCTNAGC 3 cut(s) 1005, 1180, 1609
Bpu1102I GCTNAGC 1 cut(s) 1503
BpuEI CTTGAG 3 cut(s) 674, 731, 1659
BpuMI CCSGG 2 cut(s) 1072, 1256
BsaBI GATNNNNATC 1 cut(s) 1332
BsaHI GRCGYC 2 cut(s) 963, 1199
BsaI GGTCTC 1 cut(s) 332
BsaJI CCNNGG 4 cut(s) 157, 1261, 1591, 1655
BsaXI ACNNNNNCTCC 4 cut(s) 38, 68, 1133, 1163
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 1262, 1473, 1596, 1614
Bse1I ACTGG 2 cut(s) 734, 851
Bse3DI GCAATG 3 cut(s) 138, 675, 880
Bse8I GATNNNNATC 1 cut(s) 1332
BseBI CCWGG 3 cut(s) 218, 1041, 1640
BseDI CCNNGG 4 cut(s) 157, 1261, 1591, 1655
BseGI GGATG 9 cut(s) 469, 747, 1067, 1249, 1333, 1483, 1587, 1703, 1725
BseJI GATNNNNATC 1 cut(s) 1332
BseLI CCNNNNNNNGG 5 cut(s) 63, 1262, 1473, 1596, 1614
BseMI GCAATG 3 cut(s) 138, 675, 880
BseNI ACTGG 2 cut(s) 734, 851
BseRI GAGGAG 2 cut(s) 216, 1154
BseXI GCAGC 9 cut(s) 158, 343, 486, 1351, 1399, 1475, 1609, 1637, 1691
BseYI CCCAGC 1 cut(s) 1472
BsgI GTGCAG 1 cut(s) 1440
Bsh1236I CGCG 3 cut(s) 783, 1417, 1684
BshFI GGCC 8 cut(s) 90, 306, 486, 621, 765, 1288, 1607, 1643
BsiHKAI GWGCWC 1 cut(s) 703
BsiSI CCGG 2 cut(s) 1071, 1256
BslFI GGGAC 1 cut(s) 770
BslI CCNNNNNNNGG 5 cut(s) 63, 1262, 1473, 1596, 1614
BsmAI GTCTC 2 cut(s) 9, 332
BsmFI GGGAC 1 cut(s) 770
BsnI GGCC 8 cut(s) 90, 306, 486, 621, 765, 1288, 1607, 1643
Bso31I GGTCTC 1 cut(s) 332
Bsp1286I GDGCHC 1 cut(s) 703
Bsp1407I TGTACA 1 cut(s) 1224
Bsp143I GATC 4 cut(s) 23, 415, 1231, 1333
Bsp1720I GCTNAGC 1 cut(s) 1503
Bsp19I CCATGG 2 cut(s) 157, 1591
BspACI CCGC 9 cut(s) 282, 285, 471, 663, 680, 1342, 1556, 1644, 1707
BspANI GGCC 8 cut(s) 90, 306, 486, 621, 765, 1288, 1607, 1643
BspFNI CGCG 3 cut(s) 783, 1417, 1684
BspLI GGNNCC 5 cut(s) 33, 222, 307, 417, 731
BspMAI CTGCAG 2 cut(s) 1309, 1627
BspPI GGATC 2 cut(s) 410, 423
BspTNI GGTCTC 1 cut(s) 332
BsrDI GCAATG 3 cut(s) 138, 675, 880
BsrGI TGTACA 1 cut(s) 1224
BsrI ACTGG 2 cut(s) 734, 851
BssECI CCNNGG 4 cut(s) 157, 1261, 1591, 1655
BssMI GATC 4 cut(s) 23, 415, 1231, 1333
BssNI GRCGYC 2 cut(s) 963, 1199
BssSI CACGAG 1 cut(s) 1633
BssT1I CCWWGG 3 cut(s) 157, 1261, 1591
Bst2BI CACGAG 1 cut(s) 1633
Bst2UI CCWGG 3 cut(s) 218, 1041, 1640
Bst4CI ACNGT 5 cut(s) 12, 457, 779, 1024, 1149
Bst6I CTCTTC 6 cut(s) 234, 414, 580, 603, 1131, 1432
BstACI GRCGYC 2 cut(s) 963, 1199
BstAUI TGTACA 1 cut(s) 1224
BstC8I GCNNGC 8 cut(s) 181, 510, 661, 813, 900, 1419, 1563, 1630
BstDSI CCRYGG 2 cut(s) 157, 1591
BstENI CCTNNNNNAGG 1 cut(s) 1612
BstF5I GGATG 9 cut(s) 469, 747, 1067, 1249, 1333, 1483, 1587, 1703, 1725
BstFNI CGCG 3 cut(s) 783, 1417, 1684
BstHHI GCGC 3 cut(s) 403, 1417, 1684
BstKTI GATC 4 cut(s) 26, 418, 1234, 1336
BstMAI GTCTC 2 cut(s) 9, 332
BstMBI GATC 4 cut(s) 23, 415, 1231, 1333
BstNI CCWGG 3 cut(s) 218, 1041, 1640
BstNSI RCATGY 2 cut(s) 838, 902
BstSCI CCNGG 5 cut(s) 216, 1039, 1070, 1254, 1638
BstSFI CTRYAG 4 cut(s) 558, 775, 1305, 1623
BstUI CGCG 3 cut(s) 783, 1417, 1684
BstV1I GCAGC 9 cut(s) 158, 343, 486, 1351, 1399, 1475, 1609, 1637, 1691
BstV2I GAAGAC 1 cut(s) 980
BstX2I RGATCY 2 cut(s) 415, 1231
BstXI CCANNNNNNTGG 1 cut(s) 863
BstYI RGATCY 2 cut(s) 415, 1231
BsuRI GGCC 8 cut(s) 90, 306, 486, 621, 765, 1288, 1607, 1643
BtgI CCRYGG 2 cut(s) 157, 1591
BtsCI GGATG 9 cut(s) 469, 747, 1067, 1249, 1333, 1483, 1587, 1703, 1725
BtsI GCAGTG 2 cut(s) 102, 1323
BtsIMutI CAGTG 4 cut(s) 102, 1000, 1029, 1323
Cac8I GCNNGC 8 cut(s) 181, 510, 661, 813, 900, 1419, 1563, 1630
CaiI CAGNNNCTG 1 cut(s) 1153
CfoI GCGC 3 cut(s) 403, 1417, 1684
Cfr13I GGNCC 5 cut(s) 32, 305, 1258, 1605, 1652
CseI GACGC 2 cut(s) 772, 971
Csp6I GTAC 4 cut(s) 435, 934, 1159, 1225
CspCI CAANNNNNGTGG 2 cut(s) 116, 151
CviQI GTAC 4 cut(s) 435, 934, 1159, 1225
DpnI GATC 4 cut(s) 25, 417, 1233, 1335
DpnII GATC 4 cut(s) 23, 415, 1231, 1333
EaeI YGGCCR 4 cut(s) 484, 619, 763, 1641
Eam1104I CTCTTC 6 cut(s) 234, 414, 580, 603, 1131, 1432
EarI CTCTTC 6 cut(s) 234, 414, 580, 603, 1131, 1432
EciI GGCGGA 1 cut(s) 271
Ecl136II GAGCTC 1 cut(s) 701
Eco130I CCWWGG 3 cut(s) 157, 1261, 1591
Eco147I AGGCCT 1 cut(s) 1288
Eco24I GRGCYC 1 cut(s) 703
Eco31I GGTCTC 1 cut(s) 332
Eco32I GATATC 2 cut(s) 1281, 1516
Eco47I GGWCC 3 cut(s) 32, 1258, 1652
Eco53kI GAGCTC 1 cut(s) 701
Eco57I CTGAAG 3 cut(s) 395, 801, 821
EcoICRI GAGCTC 1 cut(s) 701
EcoNI CCTNNNNNAGG 1 cut(s) 1612
EcoO109I RGGNCCY 1 cut(s) 1605
EcoRII CCWGG 3 cut(s) 216, 1039, 1638
EcoRV GATATC 2 cut(s) 1281, 1516
EcoT14I CCWWGG 3 cut(s) 157, 1261, 1591
EcoT22I ATGCAT 3 cut(s) 900, 916, 980
EcoT38I GRGCYC 1 cut(s) 703
ErhI CCWWGG 3 cut(s) 157, 1261, 1591
FalI AAGNNNNNCTT 2 cut(s) 1491, 1523
FaqI GGGAC 1 cut(s) 770
FauI CCCGC 1 cut(s) 1549
FblI GTMKAC 1 cut(s) 1691
FokI GGATG 9 cut(s) 476, 734, 1054, 1256, 1340, 1490, 1594, 1690, 1732
FriOI GRGCYC 1 cut(s) 703
FspBI CTAG 5 cut(s) 386, 582, 741, 828, 1614
GlaI GCGC 3 cut(s) 402, 1416, 1683
GsaI CCCAGC 1 cut(s) 1476
GsuI CTGGAG 3 cut(s) 85, 1062, 1427
HaeIII GGCC 8 cut(s) 90, 306, 486, 621, 765, 1288, 1607, 1643
HapII CCGG 2 cut(s) 1071, 1256
HgaI GACGC 2 cut(s) 772, 971
HhaI GCGC 3 cut(s) 403, 1417, 1684
Hin1I GRCGYC 2 cut(s) 963, 1199
Hin6I GCGC 3 cut(s) 401, 1415, 1682
HinP1I GCGC 3 cut(s) 401, 1415, 1682
HindIII AAGCTT 1 cut(s) 491
HinfI GANTC 6 cut(s) 362, 588, 647, 687, 941, 1429
HpaII CCGG 2 cut(s) 1071, 1256
HphI GGTGA 2 cut(s) 1029, 1277
Hpy166II GTNNAC 7 cut(s) 20, 154, 437, 856, 1159, 1225, 1692
Hpy188I TCNGA 7 cut(s) 547, 603, 760, 910, 1089, 1096, 1659
Hpy8I GTNNAC 7 cut(s) 20, 154, 437, 856, 1159, 1225, 1692
Hpy99I CGWCG 1 cut(s) 547
HpyAV CCTTC 3 cut(s) 602, 677, 1590
HpyCH4III ACNGT 5 cut(s) 12, 457, 779, 1024, 1149
HpyCH4IV ACGT 4 cut(s) 718, 926, 1199, 1212
HpySE526I ACGT 4 cut(s) 718, 926, 1199, 1212
Hsp92I GRCGYC 2 cut(s) 963, 1199
HspAI GCGC 3 cut(s) 401, 1415, 1682
Kzo9I GATC 4 cut(s) 23, 415, 1231, 1333
LmnI GCTCC 3 cut(s) 59, 698, 1189
Lsp1109I GCAGC 9 cut(s) 158, 343, 486, 1351, 1399, 1475, 1609, 1637, 1691
LweI GCATC 5 cut(s) 874, 901, 923, 1043, 1354
MaeI CTAG 5 cut(s) 386, 582, 741, 828, 1614
MaeII ACGT 4 cut(s) 718, 926, 1199, 1212
MaeIII GTNAC 4 cut(s) 68, 316, 451, 830
MalI GATC 4 cut(s) 25, 417, 1233, 1335
MboI GATC 4 cut(s) 23, 415, 1231, 1333
MfeI CAATTG 2 cut(s) 441, 612
MflI RGATCY 2 cut(s) 415, 1231
MhlI GDGCHC 1 cut(s) 703
MlsI TGGCCA 2 cut(s) 486, 765
MluCI AATT 7 cut(s) 206, 441, 612, 806, 891, 1310, 1394
MluNI TGGCCA 2 cut(s) 486, 765
MlyI GAGTC 3 cut(s) 597, 681, 1423
MmeI TCCRAC 2 cut(s) 525, 1188
Mox20I TGGCCA 2 cut(s) 486, 765
Mph1103I ATGCAT 3 cut(s) 900, 916, 980
MroXI GAANNNNTTC 1 cut(s) 928
MscI TGGCCA 2 cut(s) 486, 765
MseI TTAA 1 cut(s) 1509
Msp20I TGGCCA 2 cut(s) 486, 765
MspA1I CMGCKG 1 cut(s) 1342
MspI CCGG 2 cut(s) 1071, 1256
MspR9I CCNGG 5 cut(s) 218, 1041, 1072, 1256, 1640
MunI CAATTG 2 cut(s) 441, 612
MvaI CCWGG 3 cut(s) 218, 1041, 1640
MvnI CGCG 3 cut(s) 783, 1417, 1684
NciI CCSGG 2 cut(s) 1072, 1256
NcoI CCATGG 2 cut(s) 157, 1591
NdeII GATC 4 cut(s) 23, 415, 1231, 1333
NlaIV GGNNCC 5 cut(s) 33, 222, 307, 417, 731
NmeAIII GCCGAG 1 cut(s) 209
NmuCI GTSAC 2 cut(s) 68, 830
NsiI ATGCAT 3 cut(s) 900, 916, 980
NspI RCATGY 2 cut(s) 838, 902
PaeI GCATGC 1 cut(s) 902
PceI AGGCCT 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 1 cut(s) 1218
PdmI GAANNNNTTC 1 cut(s) 928
PfeI GAWTC 3 cut(s) 362, 647, 941
PflFI GACNNNGTC 1 cut(s) 500
PflMI CCANNNNNTGG 1 cut(s) 63
PfoI TCCNGGA 1 cut(s) 1070
PleI GAGTC 3 cut(s) 596, 681, 1423
PpsI GAGTC 3 cut(s) 596, 681, 1423
Psp124BI GAGCTC 1 cut(s) 703
Psp1406I AACGTT 1 cut(s) 926
Psp6I CCWGG 3 cut(s) 216, 1039, 1638
PspFI CCCAGC 1 cut(s) 1472
PspGI CCWGG 3 cut(s) 216, 1039, 1638
PspN4I GGNNCC 5 cut(s) 33, 222, 307, 417, 731
PspPI GGNCC 5 cut(s) 32, 305, 1258, 1605, 1652
PstI CTGCAG 2 cut(s) 1309, 1627
PstNI CAGNNNCTG 1 cut(s) 1153
PsuI RGATCY 2 cut(s) 415, 1231
PsyI GACNNNGTC 1 cut(s) 500
RsaI GTAC 4 cut(s) 436, 935, 1160, 1226
RsaNI GTAC 4 cut(s) 435, 934, 1159, 1225
SacI GAGCTC 1 cut(s) 703
SaqAI TTAA 1 cut(s) 1509
Sau3AI GATC 4 cut(s) 23, 415, 1231, 1333
Sau96I GGNCC 5 cut(s) 32, 305, 1258, 1605, 1652
SchI GAGTC 3 cut(s) 597, 681, 1423
ScrFI CCNGG 5 cut(s) 218, 1041, 1072, 1256, 1640
SduI GDGCHC 1 cut(s) 703
SfaNI GCATC 5 cut(s) 874, 901, 923, 1043, 1354
SfcI CTRYAG 4 cut(s) 558, 775, 1305, 1623
SinI GGWCC 3 cut(s) 32, 1258, 1652
SmlI CTYRAG 3 cut(s) 689, 710, 1674
SmoI CTYRAG 3 cut(s) 689, 710, 1674
SphI GCATGC 1 cut(s) 902
Sse9I AATT 7 cut(s) 206, 441, 612, 806, 891, 1310, 1394
SseBI AGGCCT 1 cut(s) 1288
SsiI CCGC 9 cut(s) 282, 285, 471, 663, 680, 1342, 1556, 1644, 1707
SspMI CTAG 5 cut(s) 386, 582, 741, 828, 1614
SstI GAGCTC 1 cut(s) 703
StuI AGGCCT 1 cut(s) 1288
StyD4I CCNGG 5 cut(s) 216, 1039, 1070, 1254, 1638
StyI CCWWGG 3 cut(s) 157, 1261, 1591
TaaI ACNGT 5 cut(s) 12, 457, 779, 1024, 1149
TaiI ACGT 4 cut(s) 721, 929, 1202, 1215
TaqI TCGA 3 cut(s) 7, 654, 1283
TasI AATT 7 cut(s) 206, 441, 612, 806, 891, 1310, 1394
TatI WGTACW 1 cut(s) 1224
TauI GCSGC 3 cut(s) 287, 474, 1646
TfiI GAWTC 3 cut(s) 362, 647, 941
Tru1I TTAA 1 cut(s) 1509
Tru9I TTAA 1 cut(s) 1509
TscAI CASTG 4 cut(s) 109, 1000, 1029, 1323
TseFI GTSAC 2 cut(s) 68, 830
TseI GCWGC 9 cut(s) 171, 356, 474, 1339, 1412, 1463, 1622, 1625, 1679
Tsp45I GTSAC 2 cut(s) 68, 830
TspDTI ATGAA 7 cut(s) 282, 494, 555, 858, 1553, 1563, 1713
TspRI CASTG 4 cut(s) 109, 1000, 1029, 1323
Tth111I GACNNNGTC 1 cut(s) 500
Van91I CCANNNNNTGG 1 cut(s) 63
VpaK11BI GGWCC 3 cut(s) 32, 1258, 1652
XagI CCTNNNNNAGG 1 cut(s) 1612
XbaI TCTAGA 1 cut(s) 581
XceI RCATGY 2 cut(s) 838, 902
XmiI GTMKAC 1 cut(s) 1691
XmnI GAANNNNTTC 1 cut(s) 928
XspI CTAG 5 cut(s) 386, 582, 741, 828, 1614
ZraI GACGTC 1 cut(s) 1200
Zsp2I ATGCAT 3 cut(s) 900, 916, 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.