Rw5G012370

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000360
Physical Location & Seq
Forward (+)
14548789 .. 14550485
1697 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G012370.1

Sequence Viewer

Length: 1557 bp
ATGTGCCTTTCCAAGTTTCTCCTCCACAAAACTATTAACTCGGCTGCGATCCCTCCTCACATCCCATTCCCATCGCAGCAGCAACCCCGTTGGTATCAGTACCCATCCATGCAGGAACCCGAGTACCCTCCTGAGCCACCTACCTTCTCTGACGATGAACCTCTCCAATCGTCAACCTCACCTATTCAATCCCTTGTCCCCCAGAAAATAACACTTAAGACTCATACAGAGTCCTCTGCTATCTCTGCGGCAGAATCAAGCCCAAATTTTCCTGTCCTTGTCAGTATTCGTGCACCACACCTTAATGATTCTGAAGGCCATGGTCGTACGCCCATTGACCTCGTAACAGTTTTAGACAGAATGTCCGTTGATGGTCGTGAAAGGGCCATCCTAGCCATTGAATCTCTTAGAGCAGGTGGTGCAACTAACATTGCAGAAGGACTAAAGAAAGGAACTAAGGTCCTTGAAGATCGAAGGGAAAGAAACCCAGTTTCCAGCATCATCCTCTTATCTGATGGCAAAGATACATACAATACAACTGCAAACCGACTGTTGAACCAGTTGCCTGATTCGATTCGTTCTAGCAACACGCAACAGGAAACCCCAGCCCACACATTTGGATTTGGCTACGATCATGATCCCAGCATTATGCATGCTATATCTGATGTGTCAGGTGGCACCTTTTCGTTCATTGAATCAGTTGAAATGATACAAGACTCCTTTGCTCTGTGTATTGGGGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGTAAGGTCAGCATCACCTGGGGTGAAGATTTTAGCAATACCATCAGGGAGACATGTGAATGAGATTTCTACTGAGGGTCAGCAAGGTGTTGTTCATGTTGGAAATATGTATGCTGAAGAGGAAAAACAATTTCTGGTCTACCTAACAGTTCCAGAATCGTCAGCTCCGCAGGCGCATACTGAGACGTCATTGTTAGAGGTGTTATGCATGTACAAATATCTAGCTTCAAATGAGTTGATGGAGGTGCAAGGTGAGAAAATAGAGATACTGAGGCCTGAGGTTTGTTCCCCTGCTGAAAAGATAGTTTCTTTGGAGGTTGATCGGCAGCGGAACAGAATATTGGTGGCTGAAGCTATAGCTGAGGCACAAAGGTTGGCTGAGATTGGAAATCTGGAGGGTGCACAGGCTCTTTTGGCTCAACCGAAAGAAATTCTCTCAACATCAACAGCAGCCCAAGCAGGGGATTTTCACAGTAATTTGTTTGAAACTGAGCTTAGAGAAATGATGGATAGAATGGCAAGTATGAAGTGGTATAAACGAACCGGGCGTGCTTACGCTCTCTCAGGACTCAGTTCCCATAAGTTGCAAAGGGCCACAGCTAGGAAGTGTTGCAGGGTTTCCCATAGCGGCAGCTTTGAAGGTCGCAAGGCTTCCGGTGCTTCATCAGGTGCTACTCCAGGTGAATCGCCTGCCGCCGTTGGTGCTTTTGAAACACCTGCTATGGTCAGAATGGTAGAAAAATCACAGAAGAGGAATCAACCTGCGCCAGACCAAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

518

Amino Acids

56.56

Weight (kDa)

5.84

Isoelectric Point (pI)

58.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA_3 PF13768 121 - 230 3.2e-07 von Willebrand factor type A domain
VWA PF00092 129 - 235 6.3e-06 von Willebrand factor type A domain
WAV3_C PF25243 365 - 432 1.2e-06 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 422 - 509 1.6e-11 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 404, 1501
AatII GACGTC 1 cut(s) 965
Acc36I ACCTGC 3 cut(s) 404, 1501, 1546
AccB1I GGYRCC 1 cut(s) 677
AccI GTMKAC 1 cut(s) 915
AciI CCGC 5 cut(s) 248, 944, 1105, 1404, 1470
AclWI GGATC 2 cut(s) 43, 632
AcsI RAATTY 2 cut(s) 265, 1206
AcuI CTGAAG 3 cut(s) 333, 912, 1146
AcyI GRCGYC 1 cut(s) 962
AfaI GTAC 4 cut(s) 101, 125, 328, 989
AfiI CCNNNNNNNGG 3 cut(s) 1236, 1237, 1377
AflII CTTAAG 1 cut(s) 215
AflIII ACRYGT 1 cut(s) 829
AhdI GACNNNNNGTC 1 cut(s) 361
AjnI CCWGG 2 cut(s) 793, 1453
AjuI GAANNNNNNNTTGG 2 cut(s) 1100, 1132
AluBI AGCT 7 cut(s) 941, 1001, 1130, 1136, 1270, 1376, 1410
AluI AGCT 7 cut(s) 941, 1001, 1130, 1136, 1270, 1376, 1410
Alw21I GWGCWC 2 cut(s) 295, 1180
Alw26I GTCTC 2 cut(s) 820, 953
Alw44I GTGCAC 2 cut(s) 291, 1176
AlwI GGATC 2 cut(s) 43, 632
Ama87I CYCGRG 1 cut(s) 119
AoxI GGCC 4 cut(s) 316, 384, 1049, 1368
ApaLI GTGCAC 2 cut(s) 291, 1176
ApeKI GCWGC 6 cut(s) 44, 76, 79, 1102, 1226, 1407
ApoI RAATTY 2 cut(s) 265, 1206
AspLEI GCGC 2 cut(s) 952, 1543
AspS9I GGNCC 3 cut(s) 384, 460, 1368
AsuC2I CCSGG 1 cut(s) 1321
AsuHPI GGTGA 5 cut(s) 171, 783, 811, 1040, 1469
AvaI CYCGRG 1 cut(s) 119
AvaII GGWCC 1 cut(s) 460
AxyI CCTNAGG 1 cut(s) 1053
BaeGI GKGCMC 2 cut(s) 295, 1180
BaeI ACNNNNGTAYC 2 cut(s) 107, 140
BanI GGYRCC 1 cut(s) 677
BbsI GAAGAC 1 cut(s) 734
Bbv12I GWGCWC 2 cut(s) 295, 1180
BbvCI CCTCAGC 1 cut(s) 1137
BbvI GCAGC 6 cut(s) 31, 88, 91, 1114, 1238, 1419
BccI CCATC 8 cut(s) 79, 112, 365, 395, 509, 826, 1009, 1276
BceAI ACGGC 1 cut(s) 1457
BciT130I CCWGG 2 cut(s) 795, 1455
BcnI CCSGG 1 cut(s) 1321
BcoDI GTCTC 2 cut(s) 820, 953
BfaI CTAG 4 cut(s) 392, 582, 998, 1377
BfmI CTRYAG 1 cut(s) 1131
BfrI CTTAAG 1 cut(s) 215
BfuAI ACCTGC 3 cut(s) 404, 1501, 1546
BisI GCNGC 9 cut(s) 45, 77, 80, 249, 1103, 1227, 1405, 1408, 1470
BlsI GCNGC 9 cut(s) 46, 78, 81, 250, 1104, 1228, 1406, 1409, 1471
Bme1390I CCNGG 3 cut(s) 795, 1321, 1455
Bme18I GGWCC 1 cut(s) 460
BmeRI GACNNNNNGTC 1 cut(s) 361
BmeT110I CYCGRG 1 cut(s) 119
BmgT120I GGNCC 3 cut(s) 384, 460, 1368
BmiI GGNNCC 2 cut(s) 117, 679
BmrFI CCNGG 3 cut(s) 795, 1321, 1455
BmrI ACTGGG 1 cut(s) 482
BmsI GCATC 2 cut(s) 507, 797
BmuI ACTGGG 1 cut(s) 482
BpiI GAAGAC 1 cut(s) 734
BpmI CTGGAG 2 cut(s) 1190, 1437
Bpu10I CCTNAGC 3 cut(s) 132, 759, 1137
BpuMI CCSGG 1 cut(s) 1321
BsaBI GATNNNNATC 1 cut(s) 636
BsaHI GRCGYC 1 cut(s) 962
BsaJI CCNNGG 2 cut(s) 319, 794
BsaWI WCCGGW 1 cut(s) 1430
Bsc4I CCNNNNNNNGG 3 cut(s) 1236, 1237, 1377
Bse1I ACTGG 2 cut(s) 488, 559
Bse21I CCTNAGG 1 cut(s) 1053
Bse3DI GCAATG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 636
BseBI CCWGG 2 cut(s) 795, 1455
BseDI CCNNGG 2 cut(s) 319, 794
BseGI GGATG 4 cut(s) 60, 104, 387, 501
BseJI GATNNNNATC 1 cut(s) 636
BseLI CCNNNNNNNGG 3 cut(s) 1236, 1237, 1377
BseMI GCAATG 1 cut(s) 429
BseNI ACTGG 2 cut(s) 488, 559
BseRI GAGGAG 2 cut(s) 11, 45
BseSI GKGCMC 2 cut(s) 295, 1180
BseXI GCAGC 6 cut(s) 31, 88, 91, 1114, 1238, 1419
BseYI CCCAGC 2 cut(s) 604, 641
BshFI GGCC 4 cut(s) 318, 386, 1051, 1370
BshNI GGYRCC 1 cut(s) 677
BsiHKAI GWGCWC 2 cut(s) 295, 1180
BsiHKCI CYCGRG 1 cut(s) 119
BsiSI CCGG 2 cut(s) 1320, 1431
BsiWI CGTACG 1 cut(s) 326
BslFI GGGAC 1 cut(s) 182
BslI CCNNNNNNNGG 3 cut(s) 1236, 1237, 1377
BsmAI GTCTC 2 cut(s) 820, 953
BsmBI CGTCTC 1 cut(s) 953
BsmFI GGGAC 1 cut(s) 182
BsnI GGCC 4 cut(s) 318, 386, 1051, 1370
BsoBI CYCGRG 1 cut(s) 119
Bsp1286I GDGCHC 2 cut(s) 295, 1180
Bsp1407I TGTACA 1 cut(s) 987
Bsp143I GATC 5 cut(s) 48, 469, 631, 637, 1096
Bsp19I CCATGG 1 cut(s) 319
BspACI CCGC 5 cut(s) 248, 944, 1105, 1404, 1470
BspANI GGCC 4 cut(s) 318, 386, 1051, 1370
BspHI TCATGA 1 cut(s) 634
BspLI GGNNCC 2 cut(s) 117, 679
BspMI ACCTGC 3 cut(s) 404, 1501, 1546
BspPI GGATC 2 cut(s) 43, 632
BspT107I GGYRCC 1 cut(s) 677
BspTI CTTAAG 1 cut(s) 215
BsrDI GCAATG 1 cut(s) 429
BsrGI TGTACA 1 cut(s) 987
BsrI ACTGG 2 cut(s) 488, 559
BssECI CCNNGG 2 cut(s) 319, 794
BssMI GATC 5 cut(s) 48, 469, 631, 637, 1096
BssNI GRCGYC 1 cut(s) 962
BssT1I CCWWGG 1 cut(s) 319
Bst2UI CCWGG 2 cut(s) 795, 1455
Bst4CI ACNGT 5 cut(s) 349, 552, 778, 925, 1250
Bst6I CTCTTC 2 cut(s) 888, 1520
BstACI GRCGYC 1 cut(s) 962
BstAFI CTTAAG 1 cut(s) 215
BstAPI GCANNNNNTGC 1 cut(s) 419
BstAUI TGTACA 1 cut(s) 987
BstC8I GCNNGC 4 cut(s) 654, 948, 1326, 1467
BstDSI CCRYGG 1 cut(s) 319
BstF5I GGATG 4 cut(s) 60, 104, 387, 501
BstHHI GCGC 2 cut(s) 952, 1543
BstKTI GATC 5 cut(s) 51, 472, 634, 640, 1099
BstMAI GTCTC 2 cut(s) 820, 953
BstMBI GATC 5 cut(s) 48, 469, 631, 637, 1096
BstMWI GCNNNNNNNGC 8 cut(s) 245, 392, 419, 947, 1190, 1232, 1433, 1478
BstNI CCWGG 2 cut(s) 795, 1455
BstNSI RCATGY 3 cut(s) 656, 833, 988
BstSCI CCNGG 3 cut(s) 793, 1319, 1453
BstSFI CTRYAG 1 cut(s) 1131
BstSLI GKGCMC 2 cut(s) 295, 1180
BstV1I GCAGC 6 cut(s) 31, 88, 91, 1114, 1238, 1419
BstV2I GAAGAC 1 cut(s) 734
BstXI CCANNNNNNTGG 1 cut(s) 617
Bsu36I CCTNAGG 1 cut(s) 1053
BsuRI GGCC 4 cut(s) 318, 386, 1051, 1370
BtgI CCRYGG 1 cut(s) 319
BtgZI GCGATG 1 cut(s) 57
BtsCI GGATG 4 cut(s) 60, 104, 387, 501
BtsIMutI CAGTG 1 cut(s) 754
BveI ACCTGC 3 cut(s) 404, 1501, 1546
Cac8I GCNNGC 4 cut(s) 654, 948, 1326, 1467
CciI TCATGA 1 cut(s) 634
CfoI GCGC 2 cut(s) 952, 1543
Cfr13I GGNCC 3 cut(s) 384, 460, 1368
Csp6I GTAC 4 cut(s) 100, 124, 327, 988
CviAII CATG 7 cut(s) 109, 320, 635, 653, 830, 872, 985
CviQI GTAC 4 cut(s) 100, 124, 327, 988
DpnI GATC 5 cut(s) 50, 471, 633, 639, 1098
DpnII GATC 5 cut(s) 48, 469, 631, 637, 1096
DriI GACNNNNNGTC 1 cut(s) 361
Eam1104I CTCTTC 2 cut(s) 888, 1520
Eam1105I GACNNNNNGTC 1 cut(s) 361
EarI CTCTTC 2 cut(s) 888, 1520
Eco130I CCWWGG 1 cut(s) 319
Eco147I AGGCCT 1 cut(s) 1051
Eco47I GGWCC 1 cut(s) 460
Eco57I CTGAAG 3 cut(s) 333, 912, 1146
Eco81I CCTNAGG 1 cut(s) 1053
Eco88I CYCGRG 1 cut(s) 119
EcoO109I RGGNCCY 1 cut(s) 460
EcoRII CCWGG 2 cut(s) 793, 1453
EcoT14I CCWWGG 1 cut(s) 319
EcoT22I ATGCAT 2 cut(s) 654, 986
ErhI CCWWGG 1 cut(s) 319
Esp3I CGTCTC 1 cut(s) 953
FaeI CATG 7 cut(s) 112, 323, 638, 656, 833, 875, 988
FaqI GGGAC 1 cut(s) 182
FatI CATG 7 cut(s) 108, 319, 634, 652, 829, 871, 984
FblI GTMKAC 1 cut(s) 915
Fnu4HI GCNGC 9 cut(s) 45, 77, 80, 249, 1103, 1227, 1405, 1408, 1470
FokI GGATG 4 cut(s) 47, 91, 374, 488
Fsp4HI GCNGC 9 cut(s) 45, 77, 80, 249, 1103, 1227, 1405, 1408, 1470
FspBI CTAG 4 cut(s) 392, 582, 998, 1377
GlaI GCGC 2 cut(s) 951, 1542
GluI GCNGC 9 cut(s) 45, 77, 80, 249, 1103, 1227, 1405, 1408, 1470
GsaI CCCAGC 2 cut(s) 608, 645
GsuI CTGGAG 2 cut(s) 1190, 1437
HaeIII GGCC 4 cut(s) 318, 386, 1051, 1370
HapII CCGG 2 cut(s) 1320, 1431
HhaI GCGC 2 cut(s) 952, 1543
Hin1I GRCGYC 1 cut(s) 962
Hin1II CATG 7 cut(s) 112, 323, 638, 656, 833, 875, 988
Hin6I GCGC 2 cut(s) 950, 1541
HinP1I GCGC 2 cut(s) 950, 1541
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HpaII CCGG 2 cut(s) 1320, 1431
HphI GGTGA 5 cut(s) 171, 783, 811, 1040, 1469
Hpy166II GTNNAC 4 cut(s) 174, 293, 916, 1178
Hpy188I TCNGA 5 cut(s) 151, 313, 514, 664, 1505
Hpy188III TCNNGA 7 cut(s) 131, 377, 635, 761, 929, 1169, 1341
Hpy8I GTNNAC 4 cut(s) 174, 293, 916, 1178
HpyAV CCTTC 5 cut(s) 154, 308, 431, 468, 1409
HpyCH4III ACNGT 5 cut(s) 349, 552, 778, 925, 1250
HpyCH4IV ACGT 1 cut(s) 962
HpyF10VI GCNNNNNNNGC 8 cut(s) 245, 392, 419, 947, 1190, 1232, 1433, 1478
HpySE526I ACGT 1 cut(s) 962
Hsp92I GRCGYC 1 cut(s) 962
Hsp92II CATG 7 cut(s) 112, 323, 638, 656, 833, 875, 988
HspAI GCGC 2 cut(s) 950, 1541
Kzo9I GATC 5 cut(s) 48, 469, 631, 637, 1096
LmnI GCTCC 1 cut(s) 946
Lsp1109I GCAGC 6 cut(s) 31, 88, 91, 1114, 1238, 1419
LweI GCATC 2 cut(s) 507, 797
MaeI CTAG 4 cut(s) 392, 582, 998, 1377
MaeII ACGT 1 cut(s) 962
MaeIII GTNAC 1 cut(s) 343
MalI GATC 5 cut(s) 50, 471, 633, 639, 1098
MboI GATC 5 cut(s) 48, 469, 631, 637, 1096
MboII GAAGA 5 cut(s) 479, 734, 814, 905, 1537
MhlI GDGCHC 2 cut(s) 295, 1180
MluCI AATT 4 cut(s) 265, 905, 1206, 1252
MlyI GAGTC 4 cut(s) 214, 239, 710, 1338
MmeI TCCRAC 1 cut(s) 856
Mph1103I ATGCAT 2 cut(s) 654, 986
MseI TTAA 3 cut(s) 36, 216, 303
MslI CAYNNNNRTG 2 cut(s) 303, 834
MspA1I CMGCKG 1 cut(s) 1105
MspCI CTTAAG 1 cut(s) 215
MspI CCGG 2 cut(s) 1320, 1431
MspR9I CCNGG 3 cut(s) 795, 1321, 1455
MvaI CCWGG 2 cut(s) 795, 1455
MwoI GCNNNNNNNGC 8 cut(s) 245, 392, 419, 947, 1190, 1232, 1433, 1478
NciI CCSGG 1 cut(s) 1321
NcoI CCATGG 1 cut(s) 319
NdeII GATC 5 cut(s) 48, 469, 631, 637, 1096
NlaIII CATG 7 cut(s) 112, 323, 638, 656, 833, 875, 988
NlaIV GGNNCC 2 cut(s) 117, 679
NmeAIII GCCGAG 1 cut(s) 20
NsiI ATGCAT 2 cut(s) 654, 986
NspI RCATGY 3 cut(s) 656, 833, 988
PaeI GCATGC 1 cut(s) 656
PagI TCATGA 1 cut(s) 634
PaqCI CACCTGC 2 cut(s) 404, 1501
PceI AGGCCT 1 cut(s) 1051
PciI ACATGT 1 cut(s) 829
PcsI WCGNNNNNNNCGW 1 cut(s) 1321
PfeI GAWTC 9 cut(s) 254, 308, 401, 569, 574, 695, 932, 1460, 1531
Pfl23II CGTACG 1 cut(s) 326
PflFI GACNNNGTC 1 cut(s) 1550
PkrI GCNGC 9 cut(s) 46, 78, 81, 250, 1104, 1228, 1406, 1409, 1471
PleI GAGTC 4 cut(s) 214, 238, 710, 1338
PpsI GAGTC 4 cut(s) 214, 238, 710, 1338
PpuMI RGGWCCY 1 cut(s) 460
PscI ACATGT 1 cut(s) 829
Psp5II RGGWCCY 1 cut(s) 460
Psp6I CCWGG 2 cut(s) 793, 1453
PspFI CCCAGC 2 cut(s) 604, 641
PspGI CCWGG 2 cut(s) 793, 1453
PspLI CGTACG 1 cut(s) 326
PspN4I GGNNCC 2 cut(s) 117, 679
PspPI GGNCC 3 cut(s) 384, 460, 1368
PspPPI RGGWCCY 1 cut(s) 460
PsyI GACNNNGTC 1 cut(s) 1550
RsaI GTAC 4 cut(s) 101, 125, 328, 989
RsaNI GTAC 4 cut(s) 100, 124, 327, 988
RseI CAYNNNNRTG 2 cut(s) 303, 834
SaqAI TTAA 3 cut(s) 36, 216, 303
SatI GCNGC 9 cut(s) 45, 77, 80, 249, 1103, 1227, 1405, 1408, 1470
Sau3AI GATC 5 cut(s) 48, 469, 631, 637, 1096
Sau96I GGNCC 3 cut(s) 384, 460, 1368
SchI GAGTC 4 cut(s) 214, 239, 710, 1338
ScrFI CCNGG 3 cut(s) 795, 1321, 1455
SduI GDGCHC 2 cut(s) 295, 1180
SfaNI GCATC 2 cut(s) 507, 797
SfcI CTRYAG 1 cut(s) 1131
SinI GGWCC 1 cut(s) 460
SmiMI CAYNNNNRTG 2 cut(s) 303, 834
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
SphI GCATGC 1 cut(s) 656
Sse9I AATT 4 cut(s) 265, 905, 1206, 1252
SseBI AGGCCT 1 cut(s) 1051
SsiI CCGC 5 cut(s) 248, 944, 1105, 1404, 1470
SspI AATATT 1 cut(s) 1116
SspMI CTAG 4 cut(s) 392, 582, 998, 1377
StuI AGGCCT 1 cut(s) 1051
StyD4I CCNGG 3 cut(s) 793, 1319, 1453
StyI CCWWGG 1 cut(s) 319
TaaI ACNGT 5 cut(s) 349, 552, 778, 925, 1250
TaiI ACGT 1 cut(s) 965
TaqI TCGA 2 cut(s) 472, 572
TasI AATT 4 cut(s) 265, 905, 1206, 1252
TatI WGTACW 1 cut(s) 987
TauI GCSGC 3 cut(s) 251, 1407, 1472
TfiI GAWTC 9 cut(s) 254, 308, 401, 569, 574, 695, 932, 1460, 1531
Tru1I TTAA 3 cut(s) 36, 216, 303
Tru9I TTAA 3 cut(s) 36, 216, 303
TscAI CASTG 1 cut(s) 754
TseI GCWGC 6 cut(s) 44, 76, 79, 1102, 1226, 1407
TspDTI ATGAA 5 cut(s) 171, 679, 860, 1316, 1428
TspGWI ACGGA 1 cut(s) 355
TspRI CASTG 1 cut(s) 754
Tth111I GACNNNGTC 1 cut(s) 1550
Vha464I CTTAAG 1 cut(s) 215
VneI GTGCAC 2 cut(s) 291, 1176
VpaK11BI GGWCC 1 cut(s) 460
XapI RAATTY 2 cut(s) 265, 1206
XceI RCATGY 3 cut(s) 656, 833, 988
XmiI GTMKAC 1 cut(s) 915
XspI CTAG 4 cut(s) 392, 582, 998, 1377
ZraI GACGTC 1 cut(s) 963
Zsp2I ATGCAT 2 cut(s) 654, 986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.