Rmu_co8475613.1_g000001

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8475613.1
OG0000360
Physical Location & Seq
Forward (+)
1 .. 1827
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8475613.1_g000001.1.cds

Sequence Viewer

Length: 1827 bp
ttccactacccttgcattgccaacaatgtccagcatggaaatctttgctgccccatctgccgagcaaaatgggataagaataatgttcctttccaagttcccccgcttcaacaaaacaacttgggtgcacatggcttcgctgatgatgaacctctcccgttcacctcaccggctcaatcttctggcccccagaatgtcacaatcaaaactcatacagagacctctgctatccctgctgccgattcacgcccacaatatcctgttctagtcagcatctgcgcaccaccccttcaggatcctgatggcgaagtccgtacaccgattgaccttgtaacagttctagacgtaagtggcagcatgcagggccaaaagcttgaccttgtcaagcaagcaatcaaatttgtcatagaaaacatggggtcttcagatagactttctatagtttcattctcaacaaattctagaagagtccttcctcttcgaagaatgaccgttgatggccgtgaaagtgcaattgaagctgtcgaatctcttgtagcaggtggtggaactgacattgcagaaggactcaaaaaaggaacacaagtccttgaagatcggaggcaaaggaacccagttgctagcatcattctcttatccgatggccaagataactactgtcgaaacccaagccaaatgttgaagaaattgcctgcttcaattcgttccagcgacatgcaacatgaaatccctgtccacacatttgggttcggcaacgaccatgatgcaaagattatgcatgctatatctgaggaatcccggggcaccttttcatacattgaatcagttggcatgatacaagacgcctttgctctgtgcattggtggtcttctcagtgttgtggctcaggaacttcgcctcacagtgaggtcagcatcacatggagcgaagattgtatcaataccatcagggagatatgtgagtcagatttctgatgacggctcgcaaggtttagttgatattggaaatatgtacgcagaagaggtgaaacaatttctggtgtatctcttagttccacaatcctcagcttcagagactaagacatcattgatggacgtcttatgcgtgtacagagatctagcttcaaatgagtttatccagctccaaagtgggagagtagagatatcaagaccacagttttgttctcctacagaattggcagtgtgtttggaggttgatcgccagcggaacagacttttggtggctgatgctattggagaggctcaacgcttggctgaaatgggaaatttggagggtgcacgtgaaattttgactcaacgaagagaaactctcttagcatcagcagcagccaaagctggggatagtctcagtaatatgtttgaaactgagcttaaagaaatcagggataaaatggcaagtatgaagttgtacgaagaggcggggcgtgcttatgctctggctggaatgagttcacattcacgccagagggcctctgctaggggtaacgcagaaggctcgtgcctggccatgaagggtcgcaaacaacttgctacaaaagcagcgggtcgtgcttccgggggtcgcggtgtagcagtgactcttgctgccgggggttttggtggcaagggtggtcccaaaggcaaacgctctgcaatggatcacttagtggctgctatgggagactctgatgaagatgatgatatgggcttagctttatttgacggaggttcatttgacggaggcaatgatgtccatcgaggtgcttttgaaacaccagcaatggtaagaatggtacagaaatcacagcagaagaatcaatctaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

608

Amino Acids

65.47

Weight (kDa)

6.24

Isoelectric Point (pI)

48.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 530
AatII GACGTC 1 cut(s) 1098
Acc16I TGCGCA 1 cut(s) 280
Acc36I ACCTGC 1 cut(s) 530
AccB1I GGYRCC 1 cut(s) 803
AccII CGCG 1 cut(s) 1584
AciI CCGC 5 cut(s) 104, 1225, 1439, 1562, 1584
AclWI GGATC 3 cut(s) 290, 303, 1665
AcoI YGGCCR 3 cut(s) 499, 643, 1524
AcsI RAATTY 4 cut(s) 398, 457, 1285, 1305
AcuI CTGAAG 3 cut(s) 275, 408, 1053
AcvI CACGTG 1 cut(s) 1301
AcyI GRCGYC 2 cut(s) 843, 1095
AdeI CACNNNGTG 1 cut(s) 1666
AfaI GTAC 5 cut(s) 316, 1013, 1109, 1430, 1794
AfiI CCNNNNNNNGG 2 cut(s) 1356, 1497
AgsI TTSAA 9 cut(s) 110, 518, 593, 682, 699, 821, 1125, 1382, 1769
AjnI CCWGG 1 cut(s) 1521
AjuI GAANNNNNNNTTGG 2 cut(s) 1220, 1252
AluBI AGCT 8 cut(s) 373, 521, 1067, 1121, 1141, 1355, 1390, 1712
AluI AGCT 8 cut(s) 373, 521, 1067, 1121, 1141, 1355, 1390, 1712
Alw21I GWGCWC 2 cut(s) 130, 1300
Alw26I GTCTC 4 cut(s) 212, 1067, 1370, 1674
Alw44I GTGCAC 2 cut(s) 126, 1296
AlwI GGATC 3 cut(s) 290, 303, 1665
AlwNI CAGNNNCTG 1 cut(s) 276
Ama87I CYCGRG 1 cut(s) 798
AoxI GGCC 6 cut(s) 184, 364, 499, 643, 1488, 1524
ApaLI GTGCAC 2 cut(s) 126, 1296
ApeKI GCWGC 8 cut(s) 48, 236, 354, 1343, 1346, 1559, 1604, 1670
ApoI RAATTY 4 cut(s) 398, 457, 1285, 1305
ArsI GACNNNNNNTTYG 2 cut(s) 1161, 1193
Asp700I GAANNNNTTC 1 cut(s) 1468
AspLEI GCGC 1 cut(s) 281
AspS9I GGNCC 4 cut(s) 185, 364, 1488, 1631
AsuC2I CCSGG 4 cut(s) 799, 800, 1576, 1609
AsuHPI GGTGA 3 cut(s) 154, 159, 1036
AsuII TTCGAA 1 cut(s) 481
AsuNHI GCTAGC 1 cut(s) 620
AvaI CYCGRG 1 cut(s) 798
AvaII GGWCC 1 cut(s) 1631
BaeGI GKGCMC 3 cut(s) 130, 806, 1300
BalI TGGCCA 2 cut(s) 645, 1526
BamHI GGATCC 1 cut(s) 295
BanI GGYRCC 1 cut(s) 803
BauI CACGAG 1 cut(s) 1516
BbrPI CACGTG 1 cut(s) 1301
BbsI GAAGAC 2 cut(s) 414, 860
Bbv12I GWGCWC 2 cut(s) 130, 1300
BbvCI CCTCAGC 1 cut(s) 1063
BbvI GCAGC 8 cut(s) 35, 223, 366, 1355, 1358, 1571, 1591, 1657
BccI CCATC 7 cut(s) 62, 296, 491, 635, 952, 1084, 1761
BceAI ACGGC 2 cut(s) 486, 994
BcgI CGANNNNNNTGC 4 cut(s) 746, 780, 1497, 1531
BciT130I CCWGG 1 cut(s) 1523
BcnI CCSGG 4 cut(s) 799, 800, 1576, 1609
BcoDI GTCTC 4 cut(s) 212, 1067, 1370, 1674
BfaI CTAG 6 cut(s) 266, 341, 462, 621, 1118, 1497
BfmI CTRYAG 2 cut(s) 438, 1188
BfuAI ACCTGC 1 cut(s) 530
BglII AGATCT 1 cut(s) 1114
BisI GCNGC 8 cut(s) 49, 237, 355, 1344, 1347, 1560, 1605, 1671
BlpI GCTNAGC 1 cut(s) 1708
BlsI GCNGC 8 cut(s) 50, 238, 356, 1345, 1348, 1561, 1606, 1672
Bme1390I CCNGG 5 cut(s) 799, 800, 1523, 1576, 1609
Bme18I GGWCC 1 cut(s) 1631
BmeT110I CYCGRG 1 cut(s) 798
BmgT120I GGNCC 4 cut(s) 185, 364, 1488, 1631
BmiI GGNNCC 5 cut(s) 187, 297, 611, 805, 1633
BmrFI CCNGG 5 cut(s) 799, 800, 1523, 1576, 1609
BmrI ACTGGG 1 cut(s) 608
BmsI GCATC 6 cut(s) 282, 633, 754, 923, 1237, 1346
BmtI GCTAGC 1 cut(s) 624
BmuI ACTGGG 1 cut(s) 608
BpiI GAAGAC 2 cut(s) 414, 860
BplI GAGNNNNNCTC 2 cut(s) 1314, 1346
Bpu10I CCTNAGC 2 cut(s) 885, 1063
Bpu1102I GCTNAGC 1 cut(s) 1708
Bpu14I TTCGAA 1 cut(s) 481
BpuMI CCSGG 4 cut(s) 799, 800, 1576, 1609
BsaAI YACGTR 1 cut(s) 1301
BsaBI GATNNNNATC 1 cut(s) 1752
BsaHI GRCGYC 2 cut(s) 843, 1095
BsaI GGTCTC 1 cut(s) 212
BsaJI CCNNGG 4 cut(s) 798, 799, 1575, 1608
Bsc4I CCNNNNNNNGG 2 cut(s) 1356, 1497
Bse118I RCCGGY 1 cut(s) 169
Bse1I ACTGG 1 cut(s) 614
Bse3DI GCAATG 5 cut(s) 15, 555, 1659, 1750, 1785
Bse8I GATNNNNATC 1 cut(s) 1752
BseBI CCWGG 1 cut(s) 1523
BseDI CCNNGG 4 cut(s) 798, 799, 1575, 1608
BseJI GATNNNNATC 1 cut(s) 1752
BseLI CCNNNNNNNGG 2 cut(s) 1356, 1497
BseMI GCAATG 5 cut(s) 15, 555, 1659, 1750, 1785
BseMII CTCAG 6 cut(s) 780, 886, 899, 1077, 1377, 1381
BseNI ACTGG 1 cut(s) 614
BseSI GKGCMC 3 cut(s) 130, 806, 1300
BseXI GCAGC 8 cut(s) 35, 223, 366, 1355, 1358, 1571, 1591, 1657
BseYI CCCAGC 1 cut(s) 1355
Bsh1236I CGCG 1 cut(s) 1584
BshFI GGCC 6 cut(s) 186, 366, 501, 645, 1490, 1526
BshNI GGYRCC 1 cut(s) 803
BsiHKAI GWGCWC 2 cut(s) 130, 1300
BsiHKCI CYCGRG 1 cut(s) 798
BsiSI CCGG 4 cut(s) 170, 799, 1575, 1608
BslFI GGGAC 1 cut(s) 1617
BslI CCNNNNNNNGG 2 cut(s) 1356, 1497
BsmAI GTCTC 4 cut(s) 212, 1067, 1370, 1674
BsmFI GGGAC 1 cut(s) 1617
BsnI GGCC 6 cut(s) 186, 366, 501, 645, 1490, 1526
Bso31I GGTCTC 1 cut(s) 212
BsoBI CYCGRG 1 cut(s) 798
Bsp119I TTCGAA 1 cut(s) 481
Bsp1286I GDGCHC 3 cut(s) 130, 806, 1300
Bsp1407I TGTACA 1 cut(s) 1107
Bsp143I GATC 5 cut(s) 295, 595, 1114, 1216, 1657
Bsp1720I GCTNAGC 1 cut(s) 1708
BspACI CCGC 5 cut(s) 104, 1225, 1439, 1562, 1584
BspANI GGCC 6 cut(s) 186, 366, 501, 645, 1490, 1526
BspCNI CTCAG 6 cut(s) 781, 885, 898, 1076, 1378, 1380
BspFNI CGCG 1 cut(s) 1584
BspLI GGNNCC 5 cut(s) 187, 297, 611, 805, 1633
BspMI ACCTGC 1 cut(s) 530
BspOI GCTAGC 1 cut(s) 624
BspPI GGATC 3 cut(s) 290, 303, 1665
BspT104I TTCGAA 1 cut(s) 481
BspT107I GGYRCC 1 cut(s) 803
BspTNI GGTCTC 1 cut(s) 212
BsrDI GCAATG 5 cut(s) 15, 555, 1659, 1750, 1785
BsrFI RCCGGY 1 cut(s) 169
BsrGI TGTACA 1 cut(s) 1107
BsrI ACTGG 1 cut(s) 614
BssAI RCCGGY 1 cut(s) 169
BssECI CCNNGG 4 cut(s) 798, 799, 1575, 1608
BssMI GATC 5 cut(s) 295, 595, 1114, 1216, 1657
BssNI GRCGYC 2 cut(s) 843, 1095
BssSI CACGAG 1 cut(s) 1516
Bst2BI CACGAG 1 cut(s) 1516
Bst2UI CCWGG 1 cut(s) 1523
Bst4CI ACNGT 5 cut(s) 337, 493, 659, 904, 1176
Bst6I CTCTTC 5 cut(s) 460, 483, 1014, 1315, 1428
BstACI GRCGYC 2 cut(s) 843, 1095
BstAUI TGTACA 1 cut(s) 1107
BstBAI YACGTR 1 cut(s) 1301
BstBI TTCGAA 1 cut(s) 481
BstC8I GCNNGC 8 cut(s) 359, 390, 622, 693, 780, 983, 1223, 1446
BstENI CCTNNNNNAGG 1 cut(s) 1495
BstFNI CGCG 1 cut(s) 1584
BstHHI GCGC 1 cut(s) 281
BstKTI GATC 5 cut(s) 298, 598, 1117, 1219, 1660
BstMAI GTCTC 4 cut(s) 212, 1067, 1370, 1674
BstMBI GATC 5 cut(s) 295, 595, 1114, 1216, 1657
BstMWI GCNNNNNNNGC 9 cut(s) 57, 233, 363, 518, 1343, 1352, 1445, 1556, 1568
BstNI CCWGG 1 cut(s) 1523
BstNSI RCATGY 3 cut(s) 361, 718, 782
BstSCI CCNGG 5 cut(s) 797, 798, 1521, 1574, 1607
BstSFI CTRYAG 2 cut(s) 438, 1188
BstSLI GKGCMC 3 cut(s) 130, 806, 1300
BstUI CGCG 1 cut(s) 1584
BstV1I GCAGC 8 cut(s) 35, 223, 366, 1355, 1358, 1571, 1591, 1657
BstV2I GAAGAC 2 cut(s) 414, 860
BstX2I RGATCY 2 cut(s) 295, 1114
BstXI CCANNNNNNTGG 1 cut(s) 743
BstYI RGATCY 2 cut(s) 295, 1114
BsuRI GGCC 6 cut(s) 186, 366, 501, 645, 1490, 1526
BtsI GCAGTG 2 cut(s) 1206, 1599
BtsIMutI CAGTG 4 cut(s) 880, 909, 1206, 1599
BveI ACCTGC 1 cut(s) 530
Cac8I GCNNGC 8 cut(s) 359, 390, 622, 693, 780, 983, 1223, 1446
CaiI CAGNNNCTG 1 cut(s) 276
CfoI GCGC 1 cut(s) 281
Cfr10I RCCGGY 1 cut(s) 169
Cfr13I GGNCC 4 cut(s) 185, 364, 1488, 1631
Cfr9I CCCGGG 1 cut(s) 798
CseI GACGC 1 cut(s) 851
Csp6I GTAC 5 cut(s) 315, 1012, 1108, 1429, 1793
CspCI CAANNNNNGTGG 1 cut(s) 28
CviQI GTAC 5 cut(s) 315, 1012, 1108, 1429, 1793
DpnI GATC 5 cut(s) 297, 597, 1116, 1218, 1659
DpnII GATC 5 cut(s) 295, 595, 1114, 1216, 1657
DraIII CACNNNGTG 1 cut(s) 1666
EaeI YGGCCR 3 cut(s) 499, 643, 1524
Eam1104I CTCTTC 5 cut(s) 460, 483, 1014, 1315, 1428
EarI CTCTTC 5 cut(s) 460, 483, 1014, 1315, 1428
Eco31I GGTCTC 1 cut(s) 212
Eco32I GATATC 1 cut(s) 1164
Eco47I GGWCC 1 cut(s) 1631
Eco57I CTGAAG 3 cut(s) 275, 408, 1053
Eco72I CACGTG 1 cut(s) 1301
Eco88I CYCGRG 1 cut(s) 798
EcoNI CCTNNNNNAGG 1 cut(s) 1495
EcoO109I RGGNCCY 1 cut(s) 1488
EcoRII CCWGG 1 cut(s) 1521
EcoRV GATATC 1 cut(s) 1164
EcoT22I ATGCAT 1 cut(s) 780
FaqI GGGAC 1 cut(s) 1617
FauI CCCGC 3 cut(s) 111, 1432, 1555
Fnu4HI GCNGC 8 cut(s) 49, 237, 355, 1344, 1347, 1560, 1605, 1671
Fsp4HI GCNGC 8 cut(s) 49, 237, 355, 1344, 1347, 1560, 1605, 1671
FspBI CTAG 6 cut(s) 266, 341, 462, 621, 1118, 1497
FspI TGCGCA 1 cut(s) 280
GlaI GCGC 1 cut(s) 280
GluI GCNGC 8 cut(s) 49, 237, 355, 1344, 1347, 1560, 1605, 1671
GsaI CCCAGC 1 cut(s) 1359
HaeIII GGCC 6 cut(s) 186, 366, 501, 645, 1490, 1526
HapII CCGG 4 cut(s) 170, 799, 1575, 1608
HgaI GACGC 1 cut(s) 851
HhaI GCGC 1 cut(s) 281
Hin1I GRCGYC 2 cut(s) 843, 1095
Hin6I GCGC 1 cut(s) 279
HinP1I GCGC 1 cut(s) 279
HindIII AAGCTT 1 cut(s) 371
HpaII CCGG 4 cut(s) 170, 799, 1575, 1608
HphI GGTGA 3 cut(s) 154, 159, 1036
Hpy166II GTNNAC 7 cut(s) 128, 162, 317, 736, 1108, 1298, 1472
Hpy188I TCNGA 8 cut(s) 427, 600, 640, 790, 966, 973, 1072, 1687
Hpy188III TCNNGA 6 cut(s) 293, 299, 341, 462, 887, 1167
Hpy8I GTNNAC 7 cut(s) 128, 162, 317, 736, 1108, 1298, 1472
HpyAV CCTTC 5 cut(s) 299, 482, 557, 1505, 1525
HpyCH4III ACNGT 5 cut(s) 337, 493, 659, 904, 1176
HpyCH4IV ACGT 3 cut(s) 345, 1095, 1300
HpyF10VI GCNNNNNNNGC 9 cut(s) 57, 233, 363, 518, 1343, 1352, 1445, 1556, 1568
HpySE526I ACGT 3 cut(s) 345, 1095, 1300
Hsp92I GRCGYC 2 cut(s) 843, 1095
HspAI GCGC 1 cut(s) 279
Kzo9I GATC 5 cut(s) 295, 595, 1114, 1216, 1657
LmnI GCTCC 2 cut(s) 923, 1146
Lsp1109I GCAGC 8 cut(s) 35, 223, 366, 1355, 1358, 1571, 1591, 1657
LweI GCATC 6 cut(s) 282, 633, 754, 923, 1237, 1346
MaeI CTAG 6 cut(s) 266, 341, 462, 621, 1118, 1497
MaeII ACGT 3 cut(s) 345, 1095, 1300
MaeIII GTNAC 4 cut(s) 196, 331, 1502, 1594
MalI GATC 5 cut(s) 297, 597, 1116, 1218, 1659
MboI GATC 5 cut(s) 295, 595, 1114, 1216, 1657
MfeI CAATTG 1 cut(s) 513
MflI RGATCY 2 cut(s) 295, 1114
MhlI GDGCHC 3 cut(s) 130, 806, 1300
MlsI TGGCCA 2 cut(s) 645, 1526
MluCI AATT 9 cut(s) 398, 457, 513, 686, 699, 1031, 1193, 1285, 1305
MluNI TGGCCA 2 cut(s) 645, 1526
MlyI GAGTC 6 cut(s) 477, 561, 970, 1306, 1591, 1676
Mox20I TGGCCA 2 cut(s) 645, 1526
Mph1103I ATGCAT 1 cut(s) 780
MroXI GAANNNNTTC 1 cut(s) 1468
MscI TGGCCA 2 cut(s) 645, 1526
MseI TTAA 1 cut(s) 1392
MslI CAYNNNNRTG 1 cut(s) 1758
Msp20I TGGCCA 2 cut(s) 645, 1526
MspA1I CMGCKG 2 cut(s) 1225, 1562
MspI CCGG 4 cut(s) 170, 799, 1575, 1608
MspR9I CCNGG 5 cut(s) 799, 800, 1523, 1576, 1609
MunI CAATTG 1 cut(s) 513
MvaI CCWGG 1 cut(s) 1523
MvnI CGCG 1 cut(s) 1584
MwoI GCNNNNNNNGC 9 cut(s) 57, 233, 363, 518, 1343, 1352, 1445, 1556, 1568
NciI CCSGG 4 cut(s) 799, 800, 1576, 1609
NdeII GATC 5 cut(s) 295, 595, 1114, 1216, 1657
NheI GCTAGC 1 cut(s) 620
NlaIV GGNNCC 5 cut(s) 187, 297, 611, 805, 1633
NmeAIII GCCGAG 1 cut(s) 86
NmuCI GTSAC 2 cut(s) 196, 1594
NsbI TGCGCA 1 cut(s) 280
NsiI ATGCAT 1 cut(s) 780
NspI RCATGY 3 cut(s) 361, 718, 782
NspV TTCGAA 1 cut(s) 481
PaeI GCATGC 2 cut(s) 361, 782
PaqCI CACCTGC 1 cut(s) 530
PcsI WCGNNNNNNNCGW 1 cut(s) 1101
PdmI GAANNNNTTC 1 cut(s) 1468
PfeI GAWTC 5 cut(s) 242, 527, 794, 821, 1813
PflFI GACNNNGTC 1 cut(s) 380
PkrI GCNGC 8 cut(s) 50, 238, 356, 1345, 1348, 1561, 1606, 1672
PleI GAGTC 6 cut(s) 476, 561, 969, 1306, 1591, 1676
PmaCI CACGTG 1 cut(s) 1301
PmlI CACGTG 1 cut(s) 1301
PpsI GAGTC 6 cut(s) 476, 561, 969, 1306, 1591, 1676
Ppu21I YACGTR 1 cut(s) 1301
Psp6I CCWGG 1 cut(s) 1521
PspCI CACGTG 1 cut(s) 1301
PspFI CCCAGC 1 cut(s) 1355
PspGI CCWGG 1 cut(s) 1521
PspN4I GGNNCC 5 cut(s) 187, 297, 611, 805, 1633
PspPI GGNCC 4 cut(s) 185, 364, 1488, 1631
PstNI CAGNNNCTG 1 cut(s) 276
PsuI RGATCY 2 cut(s) 295, 1114
PsyI GACNNNGTC 1 cut(s) 380
RsaI GTAC 5 cut(s) 316, 1013, 1109, 1430, 1794
RsaNI GTAC 5 cut(s) 315, 1012, 1108, 1429, 1793
RseI CAYNNNNRTG 1 cut(s) 1758
SaqAI TTAA 1 cut(s) 1392
SatI GCNGC 8 cut(s) 49, 237, 355, 1344, 1347, 1560, 1605, 1671
Sau3AI GATC 5 cut(s) 295, 595, 1114, 1216, 1657
Sau96I GGNCC 4 cut(s) 185, 364, 1488, 1631
SchI GAGTC 6 cut(s) 477, 561, 970, 1306, 1591, 1676
ScrFI CCNGG 5 cut(s) 799, 800, 1523, 1576, 1609
SduI GDGCHC 3 cut(s) 130, 806, 1300
SfaNI GCATC 6 cut(s) 282, 633, 754, 923, 1237, 1346
SfcI CTRYAG 2 cut(s) 438, 1188
SfuI TTCGAA 1 cut(s) 481
SinI GGWCC 1 cut(s) 1631
SmaI CCCGGG 1 cut(s) 800
SmiMI CAYNNNNRTG 1 cut(s) 1758
SphI GCATGC 2 cut(s) 361, 782
Sse9I AATT 9 cut(s) 398, 457, 513, 686, 699, 1031, 1193, 1285, 1305
SsiI CCGC 5 cut(s) 104, 1225, 1439, 1562, 1584
SspMI CTAG 6 cut(s) 266, 341, 462, 621, 1118, 1497
StyD4I CCNGG 5 cut(s) 797, 798, 1521, 1574, 1607
TaaI ACNGT 5 cut(s) 337, 493, 659, 904, 1176
TaiI ACGT 3 cut(s) 348, 1098, 1303
TaqI TCGA 4 cut(s) 481, 525, 661, 1756
TasI AATT 9 cut(s) 398, 457, 513, 686, 699, 1031, 1193, 1285, 1305
TatI WGTACW 1 cut(s) 1107
TfiI GAWTC 5 cut(s) 242, 527, 794, 821, 1813
Tru1I TTAA 1 cut(s) 1392
Tru9I TTAA 1 cut(s) 1392
TscAI CASTG 4 cut(s) 880, 909, 1206, 1599
TseFI GTSAC 2 cut(s) 196, 1594
TseI GCWGC 8 cut(s) 48, 236, 354, 1343, 1346, 1559, 1604, 1670
Tsp45I GTSAC 2 cut(s) 196, 1594
TspDTI ATGAA 8 cut(s) 162, 435, 738, 801, 1436, 1544, 1704, 1719
TspGWI ACGGA 3 cut(s) 302, 1737, 1752
TspMI CCCGGG 1 cut(s) 798
TspRI CASTG 4 cut(s) 880, 909, 1206, 1599
Tth111I GACNNNGTC 1 cut(s) 380
VneI GTGCAC 2 cut(s) 126, 1296
VpaK11BI GGWCC 1 cut(s) 1631
XagI CCTNNNNNAGG 1 cut(s) 1495
XapI RAATTY 4 cut(s) 398, 457, 1285, 1305
XbaI TCTAGA 2 cut(s) 340, 461
XceI RCATGY 3 cut(s) 361, 718, 782
XcmI CCANNNNNNNNNTGG 1 cut(s) 1145
XmaI CCCGGG 1 cut(s) 798
XmnI GAANNNNTTC 1 cut(s) 1468
XspI CTAG 6 cut(s) 266, 341, 462, 621, 1118, 1497
ZraI GACGTC 1 cut(s) 1096
Zsp2I ATGCAT 1 cut(s) 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.