Rh5AG139500

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000360
Physical Location & Seq
Forward (+)
14497357 .. 14498955
1599 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG139500.1

Sequence Viewer

Length: 1599 bp
ATGGAGGAACTTGAGTACCCTCCTGAGCCACCTACCTTCTCTGATGATGAACCTCTCCCATCCTTCACCTCACCTGTTCAATCCTCTTCCCACCAGAATATAACACTTAAGACTCATACAAAGTCCTCTGCTATCTCTGCTGCAGAATCAAGCCCAAATTTTTCTGTCCTAGTCAGAATCGGTGCACCACCCCTTCAGGATTCTGAGGGCCATGGTCGTACACCCATTGACCTTGTGACAGTTCTGGATGTCAGTGGCAGCATGGACGGCACAAAGCTTTCCCTTCTCAAGCAAGCTGTCACGTTTGTCGTAGGAAACTTGGGGCCTTCGTATAGACTTTCTATAGTTTCATTCTCATCAAGTTCTAGAAGAGTCTTTCCTCTCCAAAGAATGTCACATGATGGTCGTGAAAATGCTCTTAGAGCAGACGGTGGAACTGACATTGCAGAAGGACTCCAGAAAGGATGTCGAGTCCTTGAAGATCGAATTAAGGAAAATAACCCAGTTGCTAGCATCATCCTCTTATCCGATGGCCAAGACACATATAATAGAGGCAGAAGCCAACTGTTGAACCAATCGCCTGATTCACTTCGTTCTAGCGACATGAAGCATGAAATCCCAGTGCACACATTTAGATTTGGCTATGACCATGATGCAAACATTATGCATGCTATATCTGATGCATCAGGTGGCACATTTTCATTCATCGAATCAGTTGGAATGATACAAGACTCCTTTGCTCTGTGTATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGTAAGGTCAGCATCGCCTGGGCTGAAGATTTTAGCAATACCATCAGGAAGACATGTGAATGAGATGTCTGATGAGGGTCAGCAAGGTGTTGTTCATCTTGGAAATATGTACGCTGAAGAGGAGAAACAATTTCTGGTGTACCTCTTAATTCCACAATCCTCAGCTCCACATACTAAGACGTCATTATTAGAGGTGTTATGCACGTACAAAGATCTAGCTTCAAATGAGCTGATGCAAGTGCAATGTGGGAAAGTAGAGATACTGAGACCTGAGGTTTGTTCCCTAGCTGAAAAGGCAGTGTCTTTGGAGGTTGATCGGCAGCGGAACAGAGTTTTGGTGGTTGAATCTATTGCAGAGGCACAAAGGTTGGCTGAGATGGGAAATCTGCAGGGCGCACAGGCTCTTTTGGCTCAACGAAAGGCAATTATATTAGCATCACCAGCGGCCCAAGCAGGAGATTTTCACAGTAACTTGTTTGAAACTGAGCTAAGAGAAATCATTGATAGAATGGCATCTATGGAATTGTATACACAAACCGGGCGTGCTTATGCTCTTGCAGGAATGAGTTCCCGTATGTCGCAAAGGCCCATAACTAGAGGTAACAGAAGAGCCTCTTGTCTCTCTGCTGATTTAGTTGCTTCCATGAGGGGTGTCCATTCCTATGTTGGTCACGATGCCTCCGGGGCAAATGCTTCATCAGTTGACGCCCCAGGTGATTCTTCTTCCCCAGTTGGTGCTTTTGAAACACCTGCTATGGTCAGAATGGAACTAAAATCACAGAAGAGGAATCAATCTTGTCAATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

532

Amino Acids

57.66

Weight (kDa)

5.74

Isoelectric Point (pI)

57.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA_CoxE PF05762 73 - 186 1.3e-06 VWA domain containing CoxE-like protein
VWA PF00092 77 - 238 1.5e-16 von Willebrand factor type A domain
VWA_3 PF13768 77 - 235 2.6e-11 von Willebrand factor type A domain
VWA_2 PF13519 78 - 179 1.2e-14 von Willebrand factor type A domain
Vwaint PF14624 425 - 467 3.4e-06 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1549
AatII GACGTC 1 cut(s) 974
Acc36I ACCTGC 1 cut(s) 1549
AccI GTMKAC 1 cut(s) 1319
AciI CCGC 2 cut(s) 1114, 1235
AcoI YGGCCR 1 cut(s) 532
AcsI RAATTY 1 cut(s) 157
AcuI CTGAAG 3 cut(s) 179, 836, 927
AcyI GRCGYC 2 cut(s) 971, 1497
AfaI GTAC 5 cut(s) 17, 220, 902, 932, 998
AflII CTTAAG 1 cut(s) 107
AflIII ACRYGT 1 cut(s) 844
AgsI TTSAA 7 cut(s) 80, 479, 571, 1014, 1136, 1271, 1535
AjnI CCWGG 2 cut(s) 808, 1501
AjuI GAANNNNNNNTTGG 2 cut(s) 1109, 1141
AluBI AGCT 7 cut(s) 277, 296, 956, 1010, 1021, 1079, 1279
AluI AGCT 7 cut(s) 277, 296, 956, 1010, 1021, 1079, 1279
Alw21I GWGCWC 2 cut(s) 187, 627
Alw26I GTCTC 2 cut(s) 1051, 1415
Alw44I GTGCAC 2 cut(s) 183, 623
AoxI GGCC 5 cut(s) 208, 323, 532, 1236, 1376
ApaLI GTGCAC 2 cut(s) 183, 623
ApeKI GCWGC 3 cut(s) 140, 258, 1111
ApoI RAATTY 1 cut(s) 157
ArsI GACNNNNNNTTYG 2 cut(s) 1050, 1082
Asp700I GAANNNNTTC 1 cut(s) 1357
AspLEI GCGC 1 cut(s) 1187
AspS9I GGNCC 4 cut(s) 208, 323, 1237, 1377
AsuC2I CCSGG 2 cut(s) 1330, 1474
AsuHPI GGTGA 4 cut(s) 58, 63, 1221, 1517
AsuNHI GCTAGC 1 cut(s) 509
AxyI CCTNAGG 1 cut(s) 1062
BaeGI GKGCMC 2 cut(s) 187, 627
BaeI ACNNNNGTAYC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 534
BbsI GAAGAC 2 cut(s) 749, 847
Bbv12I GWGCWC 2 cut(s) 187, 627
BbvCI CCTCAGC 1 cut(s) 952
BbvI GCAGC 3 cut(s) 127, 270, 1123
BccI CCATC 5 cut(s) 67, 395, 524, 841, 1162
BceAI ACGGC 1 cut(s) 283
BciT130I CCWGG 2 cut(s) 810, 1503
BcnI CCSGG 2 cut(s) 1330, 1474
BcoDI GTCTC 2 cut(s) 1051, 1415
BfaI CTAG 7 cut(s) 170, 366, 510, 597, 1007, 1076, 1386
BfmI CTRYAG 3 cut(s) 141, 342, 1178
BfrI CTTAAG 1 cut(s) 107
BfuAI ACCTGC 1 cut(s) 1549
BglI GCCNNNNNGGC 1 cut(s) 1475
BglII AGATCT 1 cut(s) 1003
BisI GCNGC 4 cut(s) 141, 259, 1112, 1236
BlsI GCNGC 4 cut(s) 142, 260, 1113, 1237
Bme1390I CCNGG 4 cut(s) 810, 1330, 1474, 1503
BmgT120I GGNCC 4 cut(s) 208, 323, 1237, 1377
BmiI GGNNCC 1 cut(s) 324
BmrFI CCNGG 4 cut(s) 810, 1330, 1474, 1503
BmrI ACTGGG 3 cut(s) 497, 614, 1514
BmsI GCATC 9 cut(s) 522, 643, 670, 692, 812, 1014, 1235, 1313, 1456
BmtI GCTAGC 1 cut(s) 513
BmuI ACTGGG 3 cut(s) 497, 614, 1514
BpiI GAAGAC 2 cut(s) 749, 847
BpmI CTGGAG 1 cut(s) 440
Bpu10I CCTNAGC 3 cut(s) 24, 774, 952
BpuEI CTTGAG 2 cut(s) 32, 272
BpuMI CCSGG 2 cut(s) 1330, 1474
BsaAI YACGTR 1 cut(s) 996
BsaHI GRCGYC 2 cut(s) 971, 1497
BsaI GGTCTC 1 cut(s) 1051
BsaJI CCNNGG 4 cut(s) 211, 809, 1473, 1501
BsaXI ACNNNNNCTCC 2 cut(s) 1454, 1484
Bse1I ACTGG 3 cut(s) 503, 620, 1520
Bse21I CCTNAGG 1 cut(s) 1062
Bse3DI GCAATG 2 cut(s) 441, 1040
BseBI CCWGG 2 cut(s) 810, 1503
BseDI CCNNGG 4 cut(s) 211, 809, 1473, 1501
BseGI GGATG 4 cut(s) 59, 253, 470, 516
BseMI GCAATG 2 cut(s) 441, 1040
BseMII CTCAG 9 cut(s) 15, 195, 775, 788, 966, 1046, 1053, 1155, 1266
BseNI ACTGG 3 cut(s) 503, 620, 1520
BseRI GAGGAG 1 cut(s) 926
BseSI GKGCMC 2 cut(s) 187, 627
BseXI GCAGC 3 cut(s) 127, 270, 1123
BshFI GGCC 5 cut(s) 210, 325, 534, 1238, 1378
BsiHKAI GWGCWC 2 cut(s) 187, 627
BsiSI CCGG 2 cut(s) 1329, 1473
BsmAI GTCTC 2 cut(s) 1051, 1415
BsnI GGCC 5 cut(s) 210, 325, 534, 1238, 1378
Bso31I GGTCTC 1 cut(s) 1051
Bsp1286I GDGCHC 2 cut(s) 187, 627
Bsp143I GATC 3 cut(s) 481, 1003, 1105
Bsp19I CCATGG 1 cut(s) 211
BspACI CCGC 2 cut(s) 1114, 1235
BspANI GGCC 5 cut(s) 210, 325, 534, 1238, 1378
BspCNI CTCAG 9 cut(s) 16, 196, 774, 787, 965, 1047, 1054, 1156, 1267
BspLI GGNNCC 1 cut(s) 324
BspMAI CTGCAG 2 cut(s) 145, 1182
BspMI ACCTGC 1 cut(s) 1549
BspOI GCTAGC 1 cut(s) 513
BspQI GCTCTTC 1 cut(s) 1393
BspTI CTTAAG 1 cut(s) 107
BspTNI GGTCTC 1 cut(s) 1051
BsrDI GCAATG 2 cut(s) 441, 1040
BsrI ACTGG 3 cut(s) 503, 620, 1520
BssECI CCNNGG 4 cut(s) 211, 809, 1473, 1501
BssMI GATC 3 cut(s) 481, 1003, 1105
BssNAI GTATAC 1 cut(s) 1320
BssNI GRCGYC 2 cut(s) 971, 1497
BssT1I CCWWGG 1 cut(s) 211
Bst1107I GTATAC 1 cut(s) 1320
Bst2UI CCWGG 2 cut(s) 810, 1503
Bst4CI ACNGT 5 cut(s) 241, 431, 567, 793, 1259
Bst6I CTCTTC 5 cut(s) 91, 364, 903, 1393, 1568
BstACI GRCGYC 2 cut(s) 971, 1497
BstAFI CTTAAG 1 cut(s) 107
BstBAI YACGTR 1 cut(s) 996
BstC8I GCNNGC 4 cut(s) 294, 511, 669, 1335
BstDSI CCRYGG 1 cut(s) 211
BstF5I GGATG 4 cut(s) 59, 253, 470, 516
BstHHI GCGC 1 cut(s) 1187
BstKTI GATC 3 cut(s) 484, 1006, 1108
BstMAI GTCTC 2 cut(s) 1051, 1415
BstMBI GATC 3 cut(s) 481, 1003, 1105
BstMWI GCNNNNNNNGC 8 cut(s) 137, 267, 422, 1085, 1199, 1232, 1241, 1475
BstNI CCWGG 2 cut(s) 810, 1503
BstNSI RCATGY 2 cut(s) 671, 848
BstSCI CCNGG 4 cut(s) 808, 1328, 1472, 1501
BstSFI CTRYAG 3 cut(s) 141, 342, 1178
BstSLI GKGCMC 2 cut(s) 187, 627
BstV1I GCAGC 3 cut(s) 127, 270, 1123
BstV2I GAAGAC 2 cut(s) 749, 847
BstX2I RGATCY 1 cut(s) 1003
BstYI RGATCY 1 cut(s) 1003
BstZ17I GTATAC 1 cut(s) 1320
Bsu36I CCTNAGG 1 cut(s) 1062
BsuRI GGCC 5 cut(s) 210, 325, 534, 1238, 1378
BtgI CCRYGG 1 cut(s) 211
BtgZI GCGATG 1 cut(s) 789
BtsCI GGATG 4 cut(s) 59, 253, 470, 516
BtsI GCAGTG 1 cut(s) 1095
BtsIMutI CAGTG 4 cut(s) 259, 627, 769, 1095
BveI ACCTGC 1 cut(s) 1549
Cac8I GCNNGC 4 cut(s) 294, 511, 669, 1335
CfoI GCGC 1 cut(s) 1187
Cfr13I GGNCC 4 cut(s) 208, 323, 1237, 1377
CseI GACGC 1 cut(s) 1505
Csp6I GTAC 5 cut(s) 16, 219, 901, 931, 997
CviAII CATG 9 cut(s) 212, 262, 398, 604, 611, 650, 668, 845, 1435
CviQI GTAC 5 cut(s) 16, 219, 901, 931, 997
DpnI GATC 3 cut(s) 483, 1005, 1107
DpnII GATC 3 cut(s) 481, 1003, 1105
EaeI YGGCCR 1 cut(s) 532
Eam1104I CTCTTC 5 cut(s) 91, 364, 903, 1393, 1568
EarI CTCTTC 5 cut(s) 91, 364, 903, 1393, 1568
Eco130I CCWWGG 1 cut(s) 211
Eco31I GGTCTC 1 cut(s) 1051
Eco57I CTGAAG 3 cut(s) 179, 836, 927
Eco81I CCTNAGG 1 cut(s) 1062
EcoO109I RGGNCCY 1 cut(s) 323
EcoRII CCWGG 2 cut(s) 808, 1501
EcoT14I CCWWGG 1 cut(s) 211
EcoT22I ATGCAT 2 cut(s) 669, 685
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 9 cut(s) 215, 265, 401, 607, 614, 653, 671, 848, 1438
FalI AAGNNNNNCTT 2 cut(s) 1390, 1422
FatI CATG 9 cut(s) 211, 261, 397, 603, 610, 649, 667, 844, 1434
FblI GTMKAC 1 cut(s) 1319
Fnu4HI GCNGC 4 cut(s) 141, 259, 1112, 1236
FokI GGATG 4 cut(s) 46, 260, 477, 503
Fsp4HI GCNGC 4 cut(s) 141, 259, 1112, 1236
FspBI CTAG 7 cut(s) 170, 366, 510, 597, 1007, 1076, 1386
GlaI GCGC 1 cut(s) 1186
GluI GCNGC 4 cut(s) 141, 259, 1112, 1236
GsuI CTGGAG 1 cut(s) 440
HaeIII GGCC 5 cut(s) 210, 325, 534, 1238, 1378
HapII CCGG 2 cut(s) 1329, 1473
HgaI GACGC 1 cut(s) 1505
HhaI GCGC 1 cut(s) 1187
Hin1I GRCGYC 2 cut(s) 971, 1497
Hin1II CATG 9 cut(s) 215, 265, 401, 607, 614, 653, 671, 848, 1438
Hin6I GCGC 1 cut(s) 1185
HinP1I GCGC 1 cut(s) 1185
HincII GTYRAC 1 cut(s) 1495
HindII GTYRAC 1 cut(s) 1495
HindIII AAGCTT 1 cut(s) 275
HpaII CCGG 2 cut(s) 1329, 1473
HphI GGTGA 4 cut(s) 58, 63, 1221, 1517
Hpy166II GTNNAC 6 cut(s) 185, 221, 625, 931, 1320, 1495
Hpy188I TCNGA 7 cut(s) 43, 176, 205, 529, 679, 862, 1553
Hpy188III TCNNGA 9 cut(s) 23, 197, 245, 366, 407, 457, 776, 837, 1463
Hpy8I GTNNAC 6 cut(s) 185, 221, 625, 931, 1320, 1495
HpyAV CCTTC 6 cut(s) 46, 73, 203, 293, 336, 443
HpyCH4III ACNGT 5 cut(s) 241, 431, 567, 793, 1259
HpyCH4IV ACGT 3 cut(s) 302, 971, 995
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 267, 422, 1085, 1199, 1232, 1241, 1475
HpySE526I ACGT 3 cut(s) 302, 971, 995
Hsp92I GRCGYC 2 cut(s) 971, 1497
Hsp92II CATG 9 cut(s) 215, 265, 401, 607, 614, 653, 671, 848, 1438
HspAI GCGC 1 cut(s) 1185
Kzo9I GATC 3 cut(s) 481, 1003, 1105
LguI GCTCTTC 1 cut(s) 1393
LmnI GCTCC 1 cut(s) 961
Lsp1109I GCAGC 3 cut(s) 127, 270, 1123
LweI GCATC 9 cut(s) 522, 643, 670, 692, 812, 1014, 1235, 1313, 1456
MaeI CTAG 7 cut(s) 170, 366, 510, 597, 1007, 1076, 1386
MaeII ACGT 3 cut(s) 302, 971, 995
MaeIII GTNAC 6 cut(s) 235, 298, 393, 1259, 1391, 1460
MalI GATC 3 cut(s) 483, 1005, 1107
MboI GATC 3 cut(s) 481, 1003, 1105
MflI RGATCY 1 cut(s) 1003
MhlI GDGCHC 2 cut(s) 187, 627
MlsI TGGCCA 1 cut(s) 534
MluCI AATT 7 cut(s) 157, 486, 920, 939, 1215, 1313, 1592
MluNI TGGCCA 1 cut(s) 534
MlyI GAGTC 5 cut(s) 106, 381, 447, 480, 725
MmeI TCCRAC 1 cut(s) 697
Mox20I TGGCCA 1 cut(s) 534
Mph1103I ATGCAT 2 cut(s) 669, 685
MroXI GAANNNNTTC 1 cut(s) 1357
MscI TGGCCA 1 cut(s) 534
MseI TTAA 3 cut(s) 108, 489, 938
MslI CAYNNNNRTG 2 cut(s) 849, 1452
Msp20I TGGCCA 1 cut(s) 534
MspA1I CMGCKG 2 cut(s) 1114, 1235
MspCI CTTAAG 1 cut(s) 107
MspI CCGG 2 cut(s) 1329, 1473
MspR9I CCNGG 4 cut(s) 810, 1330, 1474, 1503
MvaI CCWGG 2 cut(s) 810, 1503
MwoI GCNNNNNNNGC 8 cut(s) 137, 267, 422, 1085, 1199, 1232, 1241, 1475
NciI CCSGG 2 cut(s) 1330, 1474
NcoI CCATGG 1 cut(s) 211
NdeII GATC 3 cut(s) 481, 1003, 1105
NheI GCTAGC 1 cut(s) 509
NlaIII CATG 9 cut(s) 215, 265, 401, 607, 614, 653, 671, 848, 1438
NlaIV GGNNCC 1 cut(s) 324
NmuCI GTSAC 4 cut(s) 235, 298, 393, 1460
NsiI ATGCAT 2 cut(s) 669, 685
NspI RCATGY 2 cut(s) 671, 848
PaeI GCATGC 1 cut(s) 671
PaqCI CACCTGC 1 cut(s) 1549
PciI ACATGT 1 cut(s) 844
PciSI GCTCTTC 1 cut(s) 1393
PdmI GAANNNNTTC 1 cut(s) 1357
PfeI GAWTC 8 cut(s) 146, 177, 200, 584, 710, 1136, 1508, 1579
PkrI GCNGC 4 cut(s) 142, 260, 1113, 1237
PleI GAGTC 5 cut(s) 106, 380, 447, 479, 725
PpsI GAGTC 5 cut(s) 106, 380, 447, 479, 725
Ppu21I YACGTR 1 cut(s) 996
PscI ACATGT 1 cut(s) 844
Psp6I CCWGG 2 cut(s) 808, 1501
PspGI CCWGG 2 cut(s) 808, 1501
PspN4I GGNNCC 1 cut(s) 324
PspPI GGNCC 4 cut(s) 208, 323, 1237, 1377
PstI CTGCAG 2 cut(s) 145, 1182
PsuI RGATCY 1 cut(s) 1003
RsaI GTAC 5 cut(s) 17, 220, 902, 932, 998
RsaNI GTAC 5 cut(s) 16, 219, 901, 931, 997
RseI CAYNNNNRTG 2 cut(s) 849, 1452
SapI GCTCTTC 1 cut(s) 1393
SaqAI TTAA 3 cut(s) 108, 489, 938
SatI GCNGC 4 cut(s) 141, 259, 1112, 1236
Sau3AI GATC 3 cut(s) 481, 1003, 1105
Sau96I GGNCC 4 cut(s) 208, 323, 1237, 1377
SchI GAGTC 5 cut(s) 106, 381, 447, 480, 725
ScrFI CCNGG 4 cut(s) 810, 1330, 1474, 1503
SduI GDGCHC 2 cut(s) 187, 627
SfaNI GCATC 9 cut(s) 522, 643, 670, 692, 812, 1014, 1235, 1313, 1456
SfcI CTRYAG 3 cut(s) 141, 342, 1178
SmiMI CAYNNNNRTG 2 cut(s) 849, 1452
SmlI CTYRAG 3 cut(s) 11, 107, 287
SmoI CTYRAG 3 cut(s) 11, 107, 287
SphI GCATGC 1 cut(s) 671
Sse9I AATT 7 cut(s) 157, 486, 920, 939, 1215, 1313, 1592
SsiI CCGC 2 cut(s) 1114, 1235
SspMI CTAG 7 cut(s) 170, 366, 510, 597, 1007, 1076, 1386
StyD4I CCNGG 4 cut(s) 808, 1328, 1472, 1501
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 5 cut(s) 241, 431, 567, 793, 1259
TaiI ACGT 3 cut(s) 305, 974, 998
TaqI TCGA 3 cut(s) 469, 484, 708
TasI AATT 7 cut(s) 157, 486, 920, 939, 1215, 1313, 1592
TauI GCSGC 1 cut(s) 1238
TfiI GAWTC 8 cut(s) 146, 177, 200, 584, 710, 1136, 1508, 1579
Tru1I TTAA 3 cut(s) 108, 489, 938
Tru9I TTAA 3 cut(s) 108, 489, 938
TscAI CASTG 4 cut(s) 259, 627, 769, 1095
TseFI GTSAC 4 cut(s) 235, 298, 393, 1460
TseI GCWGC 3 cut(s) 140, 258, 1111
Tsp45I GTSAC 4 cut(s) 235, 298, 393, 1460
TspDTI ATGAA 8 cut(s) 63, 339, 620, 627, 690, 694, 875, 1476
TspRI CASTG 4 cut(s) 259, 627, 769, 1095
Vha464I CTTAAG 1 cut(s) 107
VneI GTGCAC 2 cut(s) 183, 623
XapI RAATTY 1 cut(s) 157
XbaI TCTAGA 1 cut(s) 365
XceI RCATGY 2 cut(s) 671, 848
XcmI CCANNNNNNNNNTGG 1 cut(s) 1454
XmiI GTMKAC 1 cut(s) 1319
XmnI GAANNNNTTC 1 cut(s) 1357
XspI CTAG 7 cut(s) 170, 366, 510, 597, 1007, 1076, 1386
ZraI GACGTC 1 cut(s) 972
Zsp2I ATGCAT 2 cut(s) 669, 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.