Rh5AG138900

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000360
Physical Location & Seq
Forward (+)
14422243 .. 14426843
4601 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG138900.1

Sequence Viewer

Length: 1800 bp
ATGAATTTAAGGCACTTGAGTACTCATGCACAGCACTTGATTTTCTTCCGTCTGAATGTGAAATGTTGCGCCATTTGCCTGAGTAACGTGAAAAGAGGGCAAGGTCAAGCCATCTTCACTGCTGAGTGTTCCCACTCTTTCCACTTCGACTGCATTGCCAAAAACGTCAAGCATGGAAATCTTTGCTGCCCTATCTGCAGGGCCAAATGGGATAGAATTAATGTACCGTTCCAAGCTCCCAATGATAGTGTGGATCCTCAGCGAAACCACTTGGGCGGTATCCATCCTCATCCTGAGCCCTTCTCTGACGATGAGCCTTTACTTACCACCTCTTCTACTCAGTCATCTGTCTCCCAGAGTGTGACAATTAAGACTCACACAGAGTCACCTGCGATCTCTGCTTCAGAATCACGCGCAAATTTTCCTGTGCTTGTCAGCATTCGTGCACCACCTCTTGAGGACCCTAATTGCTGCAGTCGTACACCCGTTGACCTTGTAACTGTTCTGGATGTAAGTGGCAGCATGGGTGAAACAAAGCTTTCCCTTGTCAAGAGTGCTGTCAAATTTCTCATCCAAAACTTGGGGCCTTCAGACCGGCTGTCTATAGTATCATTCTCAACAACTGCTACAAGGGTGTTTCCTCTACGAAGAATGTCTGATGATGGCCGTGAGAGTGCCATCCTAGCTGTTGAATCACTTAGATCAAGTGGTGGAACTAGCATTGCGGAAGGACTCAAGAAAGGAACTCGAGTCCTTGAAGAACGAAGGGAAAGGAACCCAGTTGCTAGCATCATGCTATTATCCGATGGCATCGATTCATACTATCCAGGTGGAAGCCAACTGAAGAAGCAATTGCCTGCCTCTATTTTTTCTTGCAAAACAGAACATGGAATTCCAGTCCACACATTTGGGTTTGGCAAGGACCATTGTCCAACTACTTTGCATACTATATCTGATGCATCAGGCGGAACCTTTTCCTTCATTGAATCAGTTGAGATGATACAAGATTCCTTCGCTATATGCATTGGTGGTCTTCTCAGTGTTGTGACTCAGGAATTGCGACTGACACTCAAGTCAGCAACACGTGGGGTGATGATTGTAGCAATACCATCAGGGAGATATTTCAGTGAGATTTCTGACGAGGGCAAGCAAGGTGTTGTTACTGTTGGAAATATGTACGCAGAAGAGGAGAAGCAATTTCTGGTATACCTCTTTGTTCCGAAATCCTCAAGAAGTGCCACCAAAACATCATTGTTGGAGGTGTTATGTATGTATAAAGATCTAGCTGCAAATGAGTTGATTCAGGTTCCAGGTGAAAGAATAGAAATACTGAGACCTAAGGTTTGTTCCCCTGCTGAAAAGGCAGTGTCTTTGGAGGTTGATCGGCAGTGCAACAGAGTTTCAGTCGCTGAAGCTATTGCAGAGGCACAACGGATGGCTGAGATGGGAAATCTGAAGGGTGCAAAGGTGACTTTGGCTCAAGAAAGATCAACTCTCTTGTCATCACCAGCTGCCCAAGCCGGGGACAGCCTCATTACTTTGCTTGAAGCTCAGCTCACCGGAGTCATTCATAGAATGGCAACAATGGATTTGTATACACTGACCGGCCGTGCTTACACTCTCTCAGAAATGAGCTCGCACTCATTGCAAAGAGCCGCAGCTACAGGTGACTCGACAACCTGGAGTCTCACCATGAGTGAAGGTGGAAATTCTGCCACCAGTAGTCGTGCGTTTGAAACACCTCATATGAGCAGAATGCTGAGGTTATCGCACAATCTTGGGACTAATCCTGCAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA VWA_3 Vwaint zf-RING_11

Protein Analysis

599

Amino Acids

64.9

Weight (kDa)

7.57

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 22 - 67 2.9e-06 Ring finger domain
zf-RING_11 PF17123 23 - 52 4.6e-10 RING-like zinc finger
zf-C3HC4 PF00097 23 - 66 1.5e-06 Zinc finger, C3HC4 type (RING finger)
VWA_CoxE PF05762 159 - 277 8.4e-09 VWA domain containing CoxE-like protein
VWA PF00092 164 - 332 6e-23 von Willebrand factor type A domain
VWA_3 PF13768 164 - 327 2.7e-17 von Willebrand factor type A domain
VWA_2 PF13519 165 - 270 4.3e-18 von Willebrand factor type A domain
Vwaint PF14624 512 - 587 2.6e-08 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 397
AasI GACNNNNNNGTC 1 cut(s) 1072
Acc36I ACCTGC 1 cut(s) 397
AccB7I CCANNNNNTGG 1 cut(s) 580
AccI GTMKAC 2 cut(s) 1206, 1595
AccII CGCG 1 cut(s) 414
AciI CCGC 4 cut(s) 276, 725, 966, 1656
AclWI GGATC 2 cut(s) 248, 261
AcoI YGGCCR 2 cut(s) 664, 1606
AcsI RAATTY 5 cut(s) 4, 418, 563, 891, 1708
AcuI CTGAAG 5 cut(s) 387, 573, 863, 1431, 1475
AcvI CACGTG 1 cut(s) 1085
AfaI GTAC 4 cut(s) 22, 225, 481, 1178
AfiI CCNNNNNNNGG 3 cut(s) 580, 1521, 1522
AflIII ACRYGT 1 cut(s) 1082
AgsI TTSAA 5 cut(s) 692, 758, 986, 1547, 1736
AhdI GACNNNNNGTC 1 cut(s) 598
AjnI CCWGG 3 cut(s) 826, 1309, 1679
Alw21I GWGCWC 2 cut(s) 448, 1637
Alw26I GTCTC 3 cut(s) 355, 1327, 1691
Alw44I GTGCAC 1 cut(s) 444
AlwI GGATC 2 cut(s) 248, 261
AlwNI CAGNNNCTG 1 cut(s) 1409
Ama87I CYCGRG 1 cut(s) 747
AoxI GGCC 4 cut(s) 201, 584, 664, 1606
ApaLI GTGCAC 1 cut(s) 444
ApeKI GCWGC 7 cut(s) 186, 471, 519, 1286, 1511, 1658, 1793
ApoI RAATTY 5 cut(s) 4, 418, 563, 891, 1708
ArsI GACNNNNNNTTYG 2 cut(s) 1326, 1358
AseI ATTAAT 1 cut(s) 219
Asp700I GAANNNNTTC 1 cut(s) 973
AspLEI GCGC 2 cut(s) 71, 416
AspS9I GGNCC 4 cut(s) 201, 460, 584, 922
AsuC2I CCSGG 1 cut(s) 1522
AsuHPI GGTGA 9 cut(s) 378, 539, 1102, 1325, 1480, 1497, 1549, 1679, 1681
AsuNHI GCTAGC 1 cut(s) 785
AvaI CYCGRG 1 cut(s) 747
AvaII GGWCC 2 cut(s) 460, 922
AxyI CCTNAGG 1 cut(s) 1338
BaeGI GKGCMC 1 cut(s) 448
BamHI GGATCC 1 cut(s) 253
BanII GRGCYC 2 cut(s) 300, 1637
BbrPI CACGTG 1 cut(s) 1085
BbsI GAAGAC 1 cut(s) 1025
Bbv12I GWGCWC 2 cut(s) 448, 1637
BbvCI CCTCAGC 2 cut(s) 258, 1760
BbvI GCAGC 6 cut(s) 173, 458, 531, 1273, 1498, 1670
BccI CCATC 8 cut(s) 119, 291, 656, 686, 800, 1117, 1429, 1438
BceAI ACGGC 2 cut(s) 651, 1593
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BciT130I CCWGG 3 cut(s) 828, 1311, 1681
BciVI GTATCC 1 cut(s) 290
BcnI CCSGG 1 cut(s) 1522
BcoDI GTCTC 3 cut(s) 355, 1327, 1691
BfaI CTAG 4 cut(s) 683, 717, 786, 1283
BfmI CTRYAG 5 cut(s) 196, 472, 603, 1662, 1791
BfuAI ACCTGC 1 cut(s) 397
BfuI GTATCC 1 cut(s) 290
BglII AGATCT 1 cut(s) 1279
BisI GCNGC 8 cut(s) 187, 472, 520, 1287, 1512, 1656, 1659, 1794
BlpI GCTNAGC 1 cut(s) 1551
BlsI GCNGC 8 cut(s) 188, 473, 521, 1288, 1513, 1657, 1660, 1795
BmcAI AGTACT 1 cut(s) 22
Bme1390I CCNGG 4 cut(s) 828, 1311, 1522, 1681
Bme18I GGWCC 2 cut(s) 460, 922
BmeRI GACNNNNNGTC 1 cut(s) 598
BmeT110I CYCGRG 1 cut(s) 747
BmgT120I GGNCC 4 cut(s) 201, 460, 584, 922
BmiI GGNNCC 6 cut(s) 255, 462, 585, 776, 970, 1308
BmrFI CCNGG 4 cut(s) 828, 1311, 1522, 1681
BmrI ACTGGG 1 cut(s) 773
BmsI GCATC 4 cut(s) 798, 819, 946, 968
BmtI GCTAGC 1 cut(s) 789
BmuI ACTGGG 1 cut(s) 773
BoxI GACNNNNGTC 1 cut(s) 927
BpiI GAAGAC 1 cut(s) 1025
BplI GAGNNNNNCTC 2 cut(s) 287, 319
BpmI CTGGAG 1 cut(s) 1702
Bpu10I CCTNAGC 3 cut(s) 258, 294, 1760
Bpu1102I GCTNAGC 1 cut(s) 1551
BpuEI CTTGAG 6 cut(s) 37, 476, 719, 1055, 1213, 1464
BpuMI CCSGG 1 cut(s) 1522
Bsa29I ATCGAT 1 cut(s) 813
BsaAI YACGTR 1 cut(s) 1085
BsaI GGTCTC 1 cut(s) 1327
BsaJI CCNNGG 1 cut(s) 1521
BsaWI WCCGGW 1 cut(s) 1559
Bsc4I CCNNNNNNNGG 3 cut(s) 580, 1521, 1522
Bse118I RCCGGY 2 cut(s) 594, 1604
Bse1I ACTGG 3 cut(s) 779, 896, 1719
Bse21I CCTNAGG 1 cut(s) 1338
Bse3DI GCAATG 3 cut(s) 153, 720, 1643
BseBI CCWGG 3 cut(s) 828, 1311, 1681
BseCI ATCGAT 1 cut(s) 813
BseDI CCNNGG 1 cut(s) 1521
BseGI GGATG 6 cut(s) 283, 289, 514, 570, 678, 1440
BseLI CCNNNNNNNGG 3 cut(s) 580, 1521, 1522
BseMI GCAATG 3 cut(s) 153, 720, 1643
BseNI ACTGG 3 cut(s) 779, 896, 1719
BseRI GAGGAG 1 cut(s) 1202
BseSI GKGCMC 1 cut(s) 448
BseX3I CGGCCG 1 cut(s) 1606
BseXI GCAGC 6 cut(s) 173, 458, 531, 1273, 1498, 1670
Bsh1236I CGCG 1 cut(s) 414
Bsh1285I CGRYCG 1 cut(s) 1609
BshFI GGCC 4 cut(s) 203, 586, 666, 1608
BshVI ATCGAT 1 cut(s) 813
BsiEI CGRYCG 1 cut(s) 1609
BsiHKAI GWGCWC 2 cut(s) 448, 1637
BsiHKCI CYCGRG 1 cut(s) 747
BsiSI CCGG 4 cut(s) 595, 1521, 1560, 1605
BslFI GGGAC 2 cut(s) 1538, 1795
BslI CCNNNNNNNGG 3 cut(s) 580, 1521, 1522
BsmAI GTCTC 3 cut(s) 355, 1327, 1691
BsmFI GGGAC 2 cut(s) 1538, 1795
BsmI GAATGC 2 cut(s) 438, 1761
BsnI GGCC 4 cut(s) 203, 586, 666, 1608
Bso31I GGTCTC 1 cut(s) 1327
BsoBI CYCGRG 1 cut(s) 747
Bsp1286I GDGCHC 3 cut(s) 300, 448, 1637
Bsp143I GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
Bsp1720I GCTNAGC 1 cut(s) 1551
BspACI CCGC 4 cut(s) 276, 725, 966, 1656
BspANI GGCC 4 cut(s) 203, 586, 666, 1608
BspDI ATCGAT 1 cut(s) 813
BspFNI CGCG 1 cut(s) 414
BspLI GGNNCC 6 cut(s) 255, 462, 585, 776, 970, 1308
BspMAI CTGCAG 3 cut(s) 200, 476, 1795
BspMI ACCTGC 1 cut(s) 397
BspOI GCTAGC 1 cut(s) 789
BspPI GGATC 2 cut(s) 248, 261
BspTNI GGTCTC 1 cut(s) 1327
BsrDI GCAATG 3 cut(s) 153, 720, 1643
BsrFI RCCGGY 2 cut(s) 594, 1604
BsrI ACTGG 3 cut(s) 779, 896, 1719
BssAI RCCGGY 2 cut(s) 594, 1604
BssECI CCNNGG 1 cut(s) 1521
BssMI GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
BssNAI GTATAC 2 cut(s) 1207, 1596
Bst1107I GTATAC 2 cut(s) 1207, 1596
Bst2UI CCWGG 3 cut(s) 828, 1311, 1681
Bst4CI ACNGT 3 cut(s) 228, 502, 1165
Bst6I CTCTTC 2 cut(s) 337, 1179
BstAPI GCANNNNNTGC 1 cut(s) 1645
BstBAI YACGTR 1 cut(s) 1085
BstC8I GCNNGC 4 cut(s) 787, 858, 1148, 1637
BstF5I GGATG 6 cut(s) 283, 289, 514, 570, 678, 1440
BstFNI CGCG 1 cut(s) 414
BstHHI GCGC 2 cut(s) 71, 416
BstKTI GATC 6 cut(s) 256, 396, 704, 1282, 1384, 1490
BstMAI GTCTC 3 cut(s) 355, 1327, 1691
BstMBI GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
BstMCI CGRYCG 1 cut(s) 1609
BstMWI GCNNNNNNNGC 7 cut(s) 75, 195, 398, 683, 1361, 1517, 1645
BstNI CCWGG 3 cut(s) 828, 1311, 1681
BstPAI GACNNNNGTC 1 cut(s) 927
BstSCI CCNGG 4 cut(s) 826, 1309, 1520, 1679
BstSFI CTRYAG 5 cut(s) 196, 472, 603, 1662, 1791
BstSLI GKGCMC 1 cut(s) 448
BstUI CGCG 1 cut(s) 414
BstV1I GCAGC 6 cut(s) 173, 458, 531, 1273, 1498, 1670
BstV2I GAAGAC 1 cut(s) 1025
BstX2I RGATCY 2 cut(s) 253, 1279
BstXI CCANNNNNNTGG 1 cut(s) 908
BstYI RGATCY 2 cut(s) 253, 1279
BstZ17I GTATAC 2 cut(s) 1207, 1596
BstZI CGGCCG 1 cut(s) 1606
Bsu15I ATCGAT 1 cut(s) 813
Bsu36I CCTNAGG 1 cut(s) 1338
BsuI GTATCC 1 cut(s) 290
BsuRI GGCC 4 cut(s) 203, 586, 666, 1608
BsuTUI ATCGAT 1 cut(s) 813
BtsCI GGATG 6 cut(s) 283, 289, 514, 570, 678, 1440
BtsI GCAGTG 3 cut(s) 117, 1371, 1394
BtsIMutI CAGTG 6 cut(s) 117, 1045, 1132, 1371, 1394, 1598
BveI ACCTGC 1 cut(s) 397
Cac8I GCNNGC 4 cut(s) 787, 858, 1148, 1637
CaiI CAGNNNCTG 1 cut(s) 1409
CfoI GCGC 2 cut(s) 71, 416
Cfr10I RCCGGY 2 cut(s) 594, 1604
Cfr13I GGNCC 4 cut(s) 201, 460, 584, 922
ClaI ATCGAT 1 cut(s) 813
Csp6I GTAC 4 cut(s) 21, 224, 480, 1177
CviAII CATG 7 cut(s) 26, 173, 523, 793, 887, 1693, 1797
CviQI GTAC 4 cut(s) 21, 224, 480, 1177
DpnI GATC 6 cut(s) 255, 395, 703, 1281, 1383, 1489
DpnII GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
DrdI GACNNNNNNGTC 1 cut(s) 1072
DriI GACNNNNNGTC 1 cut(s) 598
DseDI GACNNNNNNGTC 1 cut(s) 1072
EaeI YGGCCR 2 cut(s) 664, 1606
EagI CGGCCG 1 cut(s) 1606
Eam1104I CTCTTC 2 cut(s) 337, 1179
Eam1105I GACNNNNNGTC 1 cut(s) 598
EarI CTCTTC 2 cut(s) 337, 1179
EciI GGCGGA 1 cut(s) 981
Ecl136II GAGCTC 1 cut(s) 1635
EclXI CGGCCG 1 cut(s) 1606
Eco24I GRGCYC 2 cut(s) 300, 1637
Eco31I GGTCTC 1 cut(s) 1327
Eco47I GGWCC 2 cut(s) 460, 922
Eco52I CGGCCG 1 cut(s) 1606
Eco53kI GAGCTC 1 cut(s) 1635
Eco57I CTGAAG 5 cut(s) 387, 573, 863, 1431, 1475
Eco72I CACGTG 1 cut(s) 1085
Eco81I CCTNAGG 1 cut(s) 1338
Eco88I CYCGRG 1 cut(s) 747
EcoICRI GAGCTC 1 cut(s) 1635
EcoO109I RGGNCCY 2 cut(s) 460, 584
EcoRI GAATTC 1 cut(s) 891
EcoRII CCWGG 3 cut(s) 826, 1309, 1679
EcoT22I ATGCAT 2 cut(s) 961, 1025
EcoT38I GRGCYC 2 cut(s) 300, 1637
FaeI CATG 7 cut(s) 29, 176, 526, 796, 890, 1696, 1800
FaqI GGGAC 2 cut(s) 1538, 1795
FatI CATG 7 cut(s) 25, 172, 522, 792, 886, 1692, 1796
FauNDI CATATG 1 cut(s) 1746
FblI GTMKAC 2 cut(s) 1206, 1595
Fnu4HI GCNGC 8 cut(s) 187, 472, 520, 1287, 1512, 1656, 1659, 1794
FokI GGATG 6 cut(s) 270, 276, 521, 557, 665, 1447
FriOI GRGCYC 2 cut(s) 300, 1637
Fsp4HI GCNGC 8 cut(s) 187, 472, 520, 1287, 1512, 1656, 1659, 1794
FspBI CTAG 4 cut(s) 683, 717, 786, 1283
GlaI GCGC 2 cut(s) 70, 415
GluI GCNGC 8 cut(s) 187, 472, 520, 1287, 1512, 1656, 1659, 1794
GsuI CTGGAG 1 cut(s) 1702
HaeIII GGCC 4 cut(s) 203, 586, 666, 1608
HapII CCGG 4 cut(s) 595, 1521, 1560, 1605
HhaI GCGC 2 cut(s) 71, 416
Hin1II CATG 7 cut(s) 29, 176, 526, 796, 890, 1696, 1800
Hin6I GCGC 2 cut(s) 69, 414
HinP1I GCGC 2 cut(s) 69, 414
HincII GTYRAC 1 cut(s) 490
HindII GTYRAC 1 cut(s) 490
HindIII AAGCTT 1 cut(s) 536
HpaII CCGG 4 cut(s) 595, 1521, 1560, 1605
HphI GGTGA 9 cut(s) 378, 539, 1102, 1325, 1480, 1497, 1549, 1679, 1681
Hpy166II GTNNAC 6 cut(s) 446, 482, 490, 901, 1207, 1596
Hpy188III TCNNGA 8 cut(s) 293, 455, 506, 550, 736, 1052, 1230, 1481
Hpy8I GTNNAC 6 cut(s) 446, 482, 490, 901, 1207, 1596
HpyAV CCTTC 8 cut(s) 310, 597, 722, 759, 988, 1021, 1450, 1694
HpyCH4III ACNGT 3 cut(s) 228, 502, 1165
HpyCH4IV ACGT 3 cut(s) 87, 165, 1084
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 195, 398, 683, 1361, 1517, 1645
HpySE526I ACGT 3 cut(s) 87, 165, 1084
Hsp92II CATG 7 cut(s) 29, 176, 526, 796, 890, 1696, 1800
HspAI GCGC 2 cut(s) 69, 414
Kzo9I GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
LmnI GCTCC 1 cut(s) 241
Lsp1109I GCAGC 6 cut(s) 173, 458, 531, 1273, 1498, 1670
LweI GCATC 4 cut(s) 798, 819, 946, 968
MaeI CTAG 4 cut(s) 683, 717, 786, 1283
MaeII ACGT 3 cut(s) 87, 165, 1084
MaeIII GTNAC 8 cut(s) 83, 361, 384, 496, 1045, 1159, 1468, 1667
MalI GATC 6 cut(s) 255, 395, 703, 1281, 1383, 1489
MboI GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
MboII GAAGA 8 cut(s) 37, 106, 324, 660, 770, 856, 1025, 1196
MfeI CAATTG 1 cut(s) 851
MflI RGATCY 2 cut(s) 253, 1279
MhlI GDGCHC 3 cut(s) 300, 448, 1637
MlyI GAGTC 8 cut(s) 367, 392, 726, 759, 1042, 1572, 1664, 1693
MmeI TCCRAC 3 cut(s) 956, 1147, 1236
Mph1103I ATGCAT 2 cut(s) 961, 1025
MroXI GAANNNNTTC 1 cut(s) 973
MseI TTAA 3 cut(s) 8, 219, 369
MspA1I CMGCKG 1 cut(s) 1511
MspI CCGG 4 cut(s) 595, 1521, 1560, 1605
MspR9I CCNGG 4 cut(s) 828, 1311, 1522, 1681
MunI CAATTG 1 cut(s) 851
Mva1269I GAATGC 2 cut(s) 438, 1761
MvaI CCWGG 3 cut(s) 828, 1311, 1681
MvnI CGCG 1 cut(s) 414
MwoI GCNNNNNNNGC 7 cut(s) 75, 195, 398, 683, 1361, 1517, 1645
NciI CCSGG 1 cut(s) 1522
NdeI CATATG 1 cut(s) 1746
NdeII GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
NheI GCTAGC 1 cut(s) 785
NlaIII CATG 7 cut(s) 29, 176, 526, 796, 890, 1696, 1800
NlaIV GGNNCC 6 cut(s) 255, 462, 585, 776, 970, 1308
NmuCI GTSAC 5 cut(s) 361, 384, 1045, 1468, 1667
NsiI ATGCAT 2 cut(s) 961, 1025
PaeR7I CTCGAG 1 cut(s) 747
PaqCI CACCTGC 1 cut(s) 397
PctI GAATGC 2 cut(s) 438, 1761
PdmI GAANNNNTTC 1 cut(s) 973
PfeI GAWTC 6 cut(s) 407, 692, 815, 986, 1007, 1300
PflMI CCANNNNNTGG 1 cut(s) 580
PkrI GCNGC 8 cut(s) 188, 473, 521, 1288, 1513, 1657, 1660, 1795
PleI GAGTC 8 cut(s) 367, 391, 726, 758, 1042, 1571, 1664, 1692
PmaCI CACGTG 1 cut(s) 1085
PmlI CACGTG 1 cut(s) 1085
PpsI GAGTC 8 cut(s) 367, 391, 726, 758, 1042, 1571, 1664, 1692
Ppu21I YACGTR 1 cut(s) 1085
PpuMI RGGWCCY 1 cut(s) 460
PshAI GACNNNNGTC 1 cut(s) 927
PshBI ATTAAT 1 cut(s) 219
Psp124BI GAGCTC 1 cut(s) 1637
Psp5II RGGWCCY 1 cut(s) 460
Psp6I CCWGG 3 cut(s) 826, 1309, 1679
PspCI CACGTG 1 cut(s) 1085
PspGI CCWGG 3 cut(s) 826, 1309, 1679
PspN4I GGNNCC 6 cut(s) 255, 462, 585, 776, 970, 1308
PspPI GGNCC 4 cut(s) 201, 460, 584, 922
PspPPI RGGWCCY 1 cut(s) 460
PspXI VCTCGAGB 1 cut(s) 747
PstI CTGCAG 3 cut(s) 200, 476, 1795
PstNI CAGNNNCTG 1 cut(s) 1409
PsuI RGATCY 2 cut(s) 253, 1279
PvuII CAGCTG 1 cut(s) 1511
RsaI GTAC 4 cut(s) 22, 225, 481, 1178
RsaNI GTAC 4 cut(s) 21, 224, 480, 1177
SacI GAGCTC 1 cut(s) 1637
SaqAI TTAA 3 cut(s) 8, 219, 369
SatI GCNGC 8 cut(s) 187, 472, 520, 1287, 1512, 1656, 1659, 1794
Sau3AI GATC 6 cut(s) 253, 393, 701, 1279, 1381, 1487
Sau96I GGNCC 4 cut(s) 201, 460, 584, 922
ScaI AGTACT 1 cut(s) 22
SchI GAGTC 8 cut(s) 367, 392, 726, 759, 1042, 1572, 1664, 1693
ScrFI CCNGG 4 cut(s) 828, 1311, 1522, 1681
SduI GDGCHC 3 cut(s) 300, 448, 1637
SfaNI GCATC 4 cut(s) 798, 819, 946, 968
SfcI CTRYAG 5 cut(s) 196, 472, 603, 1662, 1791
Sfr274I CTCGAG 1 cut(s) 747
SinI GGWCC 2 cut(s) 460, 922
SlaI CTCGAG 1 cut(s) 747
SmlI CTYRAG 7 cut(s) 16, 455, 734, 747, 1070, 1228, 1479
SmoI CTYRAG 7 cut(s) 16, 455, 734, 747, 1070, 1228, 1479
SsiI CCGC 4 cut(s) 276, 725, 966, 1656
SspMI CTAG 4 cut(s) 683, 717, 786, 1283
SstI GAGCTC 1 cut(s) 1637
StyD4I CCNGG 4 cut(s) 826, 1309, 1520, 1679
TaaI ACNGT 3 cut(s) 228, 502, 1165
TaiI ACGT 3 cut(s) 90, 168, 1087
TaqI TCGA 4 cut(s) 147, 748, 813, 1673
TatI WGTACW 1 cut(s) 20
TauI GCSGC 1 cut(s) 1658
TfiI GAWTC 6 cut(s) 407, 692, 815, 986, 1007, 1300
Tru1I TTAA 3 cut(s) 8, 219, 369
Tru9I TTAA 3 cut(s) 8, 219, 369
TscAI CASTG 6 cut(s) 124, 1045, 1132, 1371, 1394, 1605
TseFI GTSAC 5 cut(s) 361, 384, 1045, 1468, 1667
TseI GCWGC 7 cut(s) 186, 471, 519, 1286, 1511, 1658, 1793
Tsp45I GTSAC 5 cut(s) 361, 384, 1045, 1468, 1667
TspDTI ATGAA 4 cut(s) 17, 807, 970, 1559
TspGWI ACGGA 2 cut(s) 38, 1447
TspRI CASTG 6 cut(s) 124, 1045, 1132, 1371, 1394, 1605
Van91I CCANNNNNTGG 1 cut(s) 580
VneI GTGCAC 1 cut(s) 444
VpaK11BI GGWCC 2 cut(s) 460, 922
VspI ATTAAT 1 cut(s) 219
XapI RAATTY 5 cut(s) 4, 418, 563, 891, 1708
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XhoI CTCGAG 1 cut(s) 747
XmiI GTMKAC 2 cut(s) 1206, 1595
XmnI GAANNNNTTC 1 cut(s) 973
XspI CTAG 4 cut(s) 683, 717, 786, 1283
ZrmI AGTACT 1 cut(s) 22
Zsp2I ATGCAT 2 cut(s) 961, 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.