Rroxscaffold_1G00058840

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000360
Physical Location & Seq
Reverse (-)
80788961 .. 80791975
3015 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00058840.1

Sequence Viewer

Length: 1782 bp
ATGAGGGCTCTCTCGGTTTCGAAGCTCTCGCCGCTCCAAAGTTTTATAACTTATCAGAGTAGCCTGACAACAGAGCAAGGCCAAGCCATCTTCACTGCTGAGTGCTCACACTGTTTCCACTACCCTTGTATAGCCAACAATGTCCAGCATGGAAATCTTTGCTGCCCCACCTGCCGAGCAAAGTGGAAAAAGGATAATGTGCCTTTCCAAATTCCTCCTCCTCAAAACAATAACTCGTCTGCGATCCCTCCGCACATCCCATTCCCATCGCAGCAGCAACCCCGTTGGTATCAGTACCCATCCATGCAGGAACCCGAGTACCCTCCTGAGCCACCTATCTTCTCTGACGATGAACCTCTCCCACCATCCACCTCACCTATTCAGTCCCTTGGCCCCCAGAAAATAACACTTAAGACTCATACAGAGTCCTCTGCTATCTCTGCGGCAGAATCAAGCCCAAATTTTCCTGTCCTTGTCAGCGTTCGTGCACCACCCCTTAATGATTCTGAAGGCCATGGTCGTACGCCTATTGACCTCGTAACAGTTCTAGACGTAAGTGGCAGCATGGAAGGCACAAAGATTTCCCTTCTCAAGCAAGCTGTCACATTTGTCATAGAAAACTTGGGGCCTTCGGATAGACTTTCTATTGTTTCGTTCTCATCAAGTTCTAGAAGAGTCTTTCCTCTCCAGAGAATGTCCGTTGATGGTCGTGAAAGTGCCATCCTAGCCATTGAGTCTCTTAGAGCAGGTGGGGCAACTAACATTGCAGAAGGACTGAAGAAAGGAACTAAGGTCCTTGAAGATCGAAGGGAAAGAAACCCAGTTTCCAGCATCATCCTCTTATCTGATGGCAAAGATACATACAATACAACTGCAAACCGACTGTTGAACCAGTTGCCTGATTCGATTCGTTCTAGCGACATGCAACAGGAAACCCCAGTCCACACATTTGGATTTGGCTACGATCATGATCCCAACATTATGCATGCTATATCTGATGTGTCAGGTGGCACCTTTTCGTTCATTGAATCAGTTGAAATGATACAAGACTCCTTTGCTCTGTGTATTGGGGGTCTTCTTAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGTAAGGTCAGCATCACCTGGGGTGAAGATTTTAGCAATACCATCAGGGAGACATGTGAATGAGATTTCTGATGAGGGTCAGCAAGGTGTTGTTCATGTTGGAAATATGTATGCTGAAGAGGAAAAAACAATTTCTGATCTAGCTTCAAATGAGTTGATGGAGGTGCAAGGTGAGAAAATAGAGATACTGAGACCTGAGGTTTGTTCCCCTGCTGAAAAGACAGTTTCTTTTGAGGTTGATCGGCAGCGGAACAGAATATTGGTGGCTGAAGCTATAGCTGAGGCACAAAGGTTGGCTGAGATTGGAAATCTGGAGGGTGCACAGGTTCTTTTGGCTCAACGGAAAGAAATTATCTCAACATCAACAGCAGCCCAAGCCGGGGATTTTCACAGTAATTTGTTTGAAACTGAGCTTAGAGAAATGATGGATAGAATGGCAAGTATGAAGTTGTATAAACGAACTGGGCGTGCTTACGCTCTCTCAGGACTCAGTTCCCATCAGTTGCAAAGGGCCACAGCTAGGGGTGACATAGGATTCGCGGGTTGTCGCAGGGTTGCCCCTAGGGGGGCTTTGGAGGTGGCAAAGCCGCCATTGCTTCATCAGGTGACGCTCCAGGTGAATTGCCTGCCGCCGTTGGGGCTTTTGAAACACCTGCTATGGTCAGAATGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

593

Amino Acids

64.96

Weight (kDa)

5.89

Isoelectric Point (pI)

58.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_11 PF17123 25 - 44 3.5e-06 RING-like zinc finger
VWA_CoxE PF05762 174 - 290 1.8e-07 VWA domain containing CoxE-like protein
VWA PF00092 178 - 346 3.4e-22 von Willebrand factor type A domain
VWA_3 PF13768 178 - 341 8.5e-19 von Willebrand factor type A domain
VWA_2 PF13519 179 - 285 1.7e-18 von Willebrand factor type A domain
Vwaint PF14624 506 - 548 2.7e-11 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 47
AarI CACCTGC 3 cut(s) 179, 737, 1770
Acc36I ACCTGC 3 cut(s) 179, 737, 1770
AccB1I GGYRCC 1 cut(s) 1010
AccBSI CCGCTC 1 cut(s) 34
AccII CGCG 1 cut(s) 1649
AciI CCGC 7 cut(s) 32, 251, 443, 1357, 1649, 1697, 1739
AclWI GGATC 2 cut(s) 238, 965
AcsI RAATTY 2 cut(s) 210, 460
AcuI CTGAAG 4 cut(s) 528, 797, 1245, 1398
AfaI GTAC 3 cut(s) 296, 320, 523
AfiI CCNNNNNNNGG 6 cut(s) 1488, 1489, 1629, 1674, 1675, 1745
AflII CTTAAG 1 cut(s) 410
AflIII ACRYGT 1 cut(s) 1162
AgsI TTSAA 7 cut(s) 800, 889, 1028, 1037, 1257, 1514, 1756
AjnI CCWGG 2 cut(s) 1126, 1722
AjuI GAANNNNNNNTTGG 2 cut(s) 1352, 1384
AluBI AGCT 7 cut(s) 25, 599, 1253, 1382, 1388, 1522, 1628
AluI AGCT 7 cut(s) 25, 599, 1253, 1382, 1388, 1522, 1628
Alw21I GWGCWC 3 cut(s) 107, 490, 1432
Alw26I GTCTC 3 cut(s) 741, 1153, 1294
Alw44I GTGCAC 2 cut(s) 486, 1428
AlwI GGATC 2 cut(s) 238, 965
Ama87I CYCGRG 1 cut(s) 314
AoxI GGCC 5 cut(s) 79, 391, 511, 626, 1620
ApaLI GTGCAC 2 cut(s) 486, 1428
ApeKI GCWGC 6 cut(s) 162, 271, 274, 561, 1354, 1478
ApoI RAATTY 2 cut(s) 210, 460
ArsI GACNNNNNNTTYG 4 cut(s) 1293, 1325, 1628, 1660
AspA2I CCTAGG 1 cut(s) 1670
AspS9I GGNCC 4 cut(s) 392, 626, 793, 1620
AsuC2I CCSGG 1 cut(s) 1489
AsuHPI GGTGA 7 cut(s) 366, 1116, 1144, 1292, 1646, 1726, 1738
AsuII TTCGAA 1 cut(s) 20
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 1 cut(s) 793
AvrII CCTAGG 1 cut(s) 1670
AxyI CCTNAGG 1 cut(s) 1305
BaeGI GKGCMC 2 cut(s) 490, 1432
BaeI ACNNNNGTAYC 2 cut(s) 302, 335
BanI GGYRCC 1 cut(s) 1010
BanII GRGCYC 1 cut(s) 10
BbsI GAAGAC 1 cut(s) 1067
Bbv12I GWGCWC 3 cut(s) 107, 490, 1432
BbvCI CCTCAGC 1 cut(s) 1389
BbvI GCAGC 6 cut(s) 149, 283, 286, 573, 1366, 1490
BceAI ACGGC 1 cut(s) 1726
BciT130I CCWGG 2 cut(s) 1128, 1724
BcnI CCSGG 1 cut(s) 1489
BcoDI GTCTC 3 cut(s) 741, 1153, 1294
BfaI CTAG 7 cut(s) 548, 669, 725, 915, 1250, 1629, 1671
BfmI CTRYAG 1 cut(s) 1383
BfrI CTTAAG 1 cut(s) 410
BfuAI ACCTGC 3 cut(s) 179, 737, 1770
BglI GCCNNNNNGGC 1 cut(s) 1747
BlnI CCTAGG 1 cut(s) 1670
Bme1390I CCNGG 3 cut(s) 1128, 1489, 1724
Bme18I GGWCC 1 cut(s) 793
BmeT110I CYCGRG 1 cut(s) 314
BmgT120I GGNCC 4 cut(s) 392, 626, 793, 1620
BmiI GGNNCC 4 cut(s) 312, 394, 627, 1012
BmrFI CCNGG 3 cut(s) 1128, 1489, 1724
BmrI ACTGGG 3 cut(s) 815, 932, 1581
BmsI GCATC 2 cut(s) 840, 1130
BmuI ACTGGG 3 cut(s) 815, 932, 1581
BpiI GAAGAC 1 cut(s) 1067
BpmI CTGGAG 3 cut(s) 671, 1442, 1706
Bpu10I CCTNAGC 3 cut(s) 327, 1092, 1389
Bpu14I TTCGAA 1 cut(s) 20
BpuEI CTTGAG 1 cut(s) 575
BpuMI CCSGG 1 cut(s) 1489
BsaBI GATNNNNATC 1 cut(s) 969
BsaI GGTCTC 1 cut(s) 1294
BsaJI CCNNGG 5 cut(s) 388, 514, 1127, 1488, 1670
Bsc4I CCNNNNNNNGG 6 cut(s) 1488, 1489, 1629, 1674, 1675, 1745
Bse1I ACTGG 4 cut(s) 821, 892, 938, 1576
Bse21I CCTNAGG 1 cut(s) 1305
Bse3DI GCAATG 2 cut(s) 762, 1700
Bse8I GATNNNNATC 1 cut(s) 969
BseBI CCWGG 2 cut(s) 1128, 1724
BseDI CCNNGG 5 cut(s) 388, 514, 1127, 1488, 1670
BseGI GGATG 5 cut(s) 255, 299, 365, 720, 834
BseJI GATNNNNATC 1 cut(s) 969
BseLI CCNNNNNNNGG 6 cut(s) 1488, 1489, 1629, 1674, 1675, 1745
BseMI GCAATG 2 cut(s) 762, 1700
BseNI ACTGG 4 cut(s) 821, 892, 938, 1576
BseRI GAGGAG 2 cut(s) 207, 210
BseSI GKGCMC 2 cut(s) 490, 1432
BseXI GCAGC 6 cut(s) 149, 283, 286, 573, 1366, 1490
Bsh1236I CGCG 1 cut(s) 1649
BshFI GGCC 5 cut(s) 81, 393, 513, 628, 1622
BshNI GGYRCC 1 cut(s) 1010
BsiHKAI GWGCWC 3 cut(s) 107, 490, 1432
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 1 cut(s) 1488
BsiWI CGTACG 1 cut(s) 521
BslFI GGGAC 1 cut(s) 370
BslI CCNNNNNNNGG 6 cut(s) 1488, 1489, 1629, 1674, 1675, 1745
BsmAI GTCTC 3 cut(s) 741, 1153, 1294
BsmFI GGGAC 1 cut(s) 370
BsnI GGCC 5 cut(s) 81, 393, 513, 628, 1622
Bso31I GGTCTC 1 cut(s) 1294
BsoBI CYCGRG 1 cut(s) 314
Bsp119I TTCGAA 1 cut(s) 20
Bsp1286I GDGCHC 4 cut(s) 10, 107, 490, 1432
Bsp143I GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
Bsp19I CCATGG 1 cut(s) 514
BspACI CCGC 7 cut(s) 32, 251, 443, 1357, 1649, 1697, 1739
BspANI GGCC 5 cut(s) 81, 393, 513, 628, 1622
BspFNI CGCG 1 cut(s) 1649
BspHI TCATGA 1 cut(s) 967
BspLI GGNNCC 4 cut(s) 312, 394, 627, 1012
BspMI ACCTGC 3 cut(s) 179, 737, 1770
BspPI GGATC 2 cut(s) 238, 965
BspT104I TTCGAA 1 cut(s) 20
BspT107I GGYRCC 1 cut(s) 1010
BspTI CTTAAG 1 cut(s) 410
BspTNI GGTCTC 1 cut(s) 1294
BsrBI CCGCTC 1 cut(s) 34
BsrDI GCAATG 2 cut(s) 762, 1700
BsrI ACTGG 4 cut(s) 821, 892, 938, 1576
BssECI CCNNGG 5 cut(s) 388, 514, 1127, 1488, 1670
BssMI GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
BssT1I CCWWGG 3 cut(s) 388, 514, 1670
Bst2UI CCWGG 2 cut(s) 1128, 1724
Bst4CI ACNGT 6 cut(s) 113, 544, 885, 1111, 1333, 1502
Bst6I CTCTTC 2 cut(s) 667, 1221
BstAFI CTTAAG 1 cut(s) 410
BstBI TTCGAA 1 cut(s) 20
BstC8I GCNNGC 4 cut(s) 597, 987, 1578, 1736
BstDSI CCRYGG 1 cut(s) 514
BstF5I GGATG 5 cut(s) 255, 299, 365, 720, 834
BstFNI CGCG 1 cut(s) 1649
BstKTI GATC 6 cut(s) 246, 805, 967, 973, 1249, 1351
BstMAI GTCTC 3 cut(s) 741, 1153, 1294
BstMBI GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
BstMWI GCNNNNNNNGC 9 cut(s) 31, 171, 440, 570, 725, 752, 1484, 1702, 1747
BstNI CCWGG 2 cut(s) 1128, 1724
BstNSI RCATGY 3 cut(s) 925, 989, 1166
BstSCI CCNGG 3 cut(s) 1126, 1487, 1722
BstSFI CTRYAG 1 cut(s) 1383
BstSLI GKGCMC 2 cut(s) 490, 1432
BstUI CGCG 1 cut(s) 1649
BstV1I GCAGC 6 cut(s) 149, 283, 286, 573, 1366, 1490
BstV2I GAAGAC 1 cut(s) 1067
BstXI CCANNNNNNTGG 1 cut(s) 950
Bsu36I CCTNAGG 1 cut(s) 1305
BsuRI GGCC 5 cut(s) 81, 393, 513, 628, 1622
BtgI CCRYGG 1 cut(s) 514
BtgZI GCGATG 1 cut(s) 252
BtsCI GGATG 5 cut(s) 255, 299, 365, 720, 834
BtsI GCAGTG 1 cut(s) 93
BtsIMutI CAGTG 2 cut(s) 93, 109
BveI ACCTGC 3 cut(s) 179, 737, 1770
Cac8I GCNNGC 4 cut(s) 597, 987, 1578, 1736
CciI TCATGA 1 cut(s) 967
Cfr13I GGNCC 4 cut(s) 392, 626, 793, 1620
CseI GACGC 1 cut(s) 1726
Csp6I GTAC 3 cut(s) 295, 319, 522
CspCI CAANNNNNGTGG 2 cut(s) 107, 142
CviAII CATG 9 cut(s) 149, 304, 515, 565, 922, 968, 986, 1163, 1205
CviQI GTAC 3 cut(s) 295, 319, 522
DpnI GATC 6 cut(s) 245, 804, 966, 972, 1248, 1350
DpnII GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
Eam1104I CTCTTC 2 cut(s) 667, 1221
EarI CTCTTC 2 cut(s) 667, 1221
Eco130I CCWWGG 3 cut(s) 388, 514, 1670
Eco24I GRGCYC 1 cut(s) 10
Eco31I GGTCTC 1 cut(s) 1294
Eco47I GGWCC 1 cut(s) 793
Eco57I CTGAAG 4 cut(s) 528, 797, 1245, 1398
Eco81I CCTNAGG 1 cut(s) 1305
Eco88I CYCGRG 1 cut(s) 314
EcoO109I RGGNCCY 2 cut(s) 626, 793
EcoRII CCWGG 2 cut(s) 1126, 1722
EcoT14I CCWWGG 3 cut(s) 388, 514, 1670
EcoT22I ATGCAT 1 cut(s) 987
EcoT38I GRGCYC 1 cut(s) 10
ErhI CCWWGG 3 cut(s) 388, 514, 1670
FaeI CATG 9 cut(s) 152, 307, 518, 568, 925, 971, 989, 1166, 1208
FaqI GGGAC 1 cut(s) 370
FatI CATG 9 cut(s) 148, 303, 514, 564, 921, 967, 985, 1162, 1204
FauI CCCGC 1 cut(s) 1642
FokI GGATG 5 cut(s) 242, 286, 352, 707, 821
FriOI GRGCYC 1 cut(s) 10
FspBI CTAG 7 cut(s) 548, 669, 725, 915, 1250, 1629, 1671
GsuI CTGGAG 3 cut(s) 671, 1442, 1706
HaeIII GGCC 5 cut(s) 81, 393, 513, 628, 1622
HapII CCGG 1 cut(s) 1488
HgaI GACGC 1 cut(s) 1726
Hin1II CATG 9 cut(s) 152, 307, 518, 568, 925, 971, 989, 1166, 1208
HpaII CCGG 1 cut(s) 1488
HphI GGTGA 7 cut(s) 366, 1116, 1144, 1292, 1646, 1726, 1738
Hpy166II GTNNAC 3 cut(s) 488, 943, 1430
Hpy188I TCNGA 9 cut(s) 57, 346, 508, 634, 847, 997, 1180, 1246, 1774
Hpy188III TCNNGA 9 cut(s) 326, 548, 669, 688, 710, 968, 1094, 1421, 1593
Hpy8I GTNNAC 3 cut(s) 488, 943, 1430
HpyAV CCTTC 6 cut(s) 503, 563, 596, 639, 764, 801
HpyCH4III ACNGT 6 cut(s) 113, 544, 885, 1111, 1333, 1502
HpyCH4IV ACGT 1 cut(s) 552
HpyCH4V TGCA 9 cut(s) 307, 488, 767, 875, 925, 985, 1276, 1430, 1615
HpyF10VI GCNNNNNNNGC 9 cut(s) 31, 171, 440, 570, 725, 752, 1484, 1702, 1747
HpySE526I ACGT 1 cut(s) 552
Hsp92II CATG 9 cut(s) 152, 307, 518, 568, 925, 971, 989, 1166, 1208
Kzo9I GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
LmnI GCTCC 2 cut(s) 39, 1725
Lsp1109I GCAGC 6 cut(s) 149, 283, 286, 573, 1366, 1490
LweI GCATC 2 cut(s) 840, 1130
MaeI CTAG 7 cut(s) 548, 669, 725, 915, 1250, 1629, 1671
MaeII ACGT 1 cut(s) 552
MaeIII GTNAC 4 cut(s) 538, 601, 1634, 1714
MalI GATC 6 cut(s) 245, 804, 966, 972, 1248, 1350
MbiI CCGCTC 1 cut(s) 34
MboI GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
MboII GAAGA 8 cut(s) 82, 331, 684, 790, 812, 1067, 1147, 1238
MhlI GDGCHC 4 cut(s) 10, 107, 490, 1432
MluCI AATT 6 cut(s) 210, 460, 1239, 1458, 1504, 1729
MlyI GAGTC 6 cut(s) 409, 434, 684, 743, 1043, 1590
MmeI TCCRAC 1 cut(s) 1189
Mph1103I ATGCAT 1 cut(s) 987
MseI TTAA 2 cut(s) 411, 498
MslI CAYNNNNRTG 1 cut(s) 1167
MspA1I CMGCKG 1 cut(s) 1357
MspCI CTTAAG 1 cut(s) 410
MspI CCGG 1 cut(s) 1488
MspR9I CCNGG 3 cut(s) 1128, 1489, 1724
MvaI CCWGG 2 cut(s) 1128, 1724
MvnI CGCG 1 cut(s) 1649
MwoI GCNNNNNNNGC 9 cut(s) 31, 171, 440, 570, 725, 752, 1484, 1702, 1747
NciI CCSGG 1 cut(s) 1489
NcoI CCATGG 1 cut(s) 514
NdeII GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
NlaIII CATG 9 cut(s) 152, 307, 518, 568, 925, 971, 989, 1166, 1208
NlaIV GGNNCC 4 cut(s) 312, 394, 627, 1012
NmeAIII GCCGAG 1 cut(s) 200
NmuCI GTSAC 3 cut(s) 601, 1634, 1714
NsiI ATGCAT 1 cut(s) 987
NspI RCATGY 3 cut(s) 925, 989, 1166
NspV TTCGAA 1 cut(s) 20
PaeI GCATGC 1 cut(s) 989
PagI TCATGA 1 cut(s) 967
PaqCI CACCTGC 3 cut(s) 179, 737, 1770
PciI ACATGT 1 cut(s) 1162
PcsI WCGNNNNNNNCGW 1 cut(s) 1573
PfeI GAWTC 6 cut(s) 449, 503, 902, 907, 1028, 1644
Pfl23II CGTACG 1 cut(s) 521
PleI GAGTC 6 cut(s) 409, 433, 683, 742, 1043, 1590
PpsI GAGTC 6 cut(s) 409, 433, 683, 742, 1043, 1590
PpuMI RGGWCCY 1 cut(s) 793
PscI ACATGT 1 cut(s) 1162
PsiI TTATAA 1 cut(s) 47
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 2 cut(s) 1126, 1722
PspGI CCWGG 2 cut(s) 1126, 1722
PspLI CGTACG 1 cut(s) 521
PspN4I GGNNCC 4 cut(s) 312, 394, 627, 1012
PspPI GGNCC 4 cut(s) 392, 626, 793, 1620
PspPPI RGGWCCY 1 cut(s) 793
RsaI GTAC 3 cut(s) 296, 320, 523
RsaNI GTAC 3 cut(s) 295, 319, 522
RseI CAYNNNNRTG 1 cut(s) 1167
SaqAI TTAA 2 cut(s) 411, 498
Sau3AI GATC 6 cut(s) 243, 802, 964, 970, 1246, 1348
Sau96I GGNCC 4 cut(s) 392, 626, 793, 1620
SchI GAGTC 6 cut(s) 409, 434, 684, 743, 1043, 1590
ScrFI CCNGG 3 cut(s) 1128, 1489, 1724
SduI GDGCHC 4 cut(s) 10, 107, 490, 1432
SfaNI GCATC 2 cut(s) 840, 1130
SfcI CTRYAG 1 cut(s) 1383
SfuI TTCGAA 1 cut(s) 20
SinI GGWCC 1 cut(s) 793
SmiMI CAYNNNNRTG 1 cut(s) 1167
SmlI CTYRAG 2 cut(s) 410, 590
SmoI CTYRAG 2 cut(s) 410, 590
SphI GCATGC 1 cut(s) 989
Sse9I AATT 6 cut(s) 210, 460, 1239, 1458, 1504, 1729
SsiI CCGC 7 cut(s) 32, 251, 443, 1357, 1649, 1697, 1739
SspI AATATT 1 cut(s) 1368
SspMI CTAG 7 cut(s) 548, 669, 725, 915, 1250, 1629, 1671
StyD4I CCNGG 3 cut(s) 1126, 1487, 1722
StyI CCWWGG 3 cut(s) 388, 514, 1670
TaaI ACNGT 6 cut(s) 113, 544, 885, 1111, 1333, 1502
TaiI ACGT 1 cut(s) 555
TaqI TCGA 3 cut(s) 20, 805, 905
TasI AATT 6 cut(s) 210, 460, 1239, 1458, 1504, 1729
TauI GCSGC 4 cut(s) 34, 446, 1699, 1741
TfiI GAWTC 6 cut(s) 449, 503, 902, 907, 1028, 1644
Tru1I TTAA 2 cut(s) 411, 498
Tru9I TTAA 2 cut(s) 411, 498
TscAI CASTG 2 cut(s) 100, 116
TseFI GTSAC 3 cut(s) 601, 1634, 1714
TseI GCWGC 6 cut(s) 162, 271, 274, 561, 1354, 1478
Tsp45I GTSAC 3 cut(s) 601, 1634, 1714
TspDTI ATGAA 5 cut(s) 366, 1012, 1193, 1568, 1697
TspGWI ACGGA 2 cut(s) 688, 1465
TspRI CASTG 2 cut(s) 100, 116
Vha464I CTTAAG 1 cut(s) 410
VneI GTGCAC 2 cut(s) 486, 1428
VpaK11BI GGWCC 1 cut(s) 793
XapI RAATTY 2 cut(s) 210, 460
XbaI TCTAGA 2 cut(s) 547, 668
XceI RCATGY 3 cut(s) 925, 989, 1166
XmaJI CCTAGG 1 cut(s) 1670
XspI CTAG 7 cut(s) 548, 669, 725, 915, 1250, 1629, 1671
Zsp2I ATGCAT 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.