Rmu_sc0002142.1_g000004

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002142.1
OG0000360
Physical Location & Seq
Reverse (-)
17431 .. 20083
2653 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002142.1_g000004.1.cds

Sequence Viewer

Length: 1905 bp
atgaattcgtctgaggctgcatctgatcaaaacaattgcggaatttgcaggagtagcctgacaagagggctaagcgaagccatcttcactgctgagtgctcgcacgttttccactaccattgcattctcaaaaatgtccagcaaggaaatctttgctgccctgtctgccaagcaaagtggaataaggataatgtacctttccaggttccccctcctcagaacaacaacttgggcacaatcccttgtcatttcacattcccatcacagcagccaccccattggttctatcctcagtactcatccatgccagaacccgagtaccctcctgagccacctaccttctctgacgatgaacctctcccatcgtgcacctcatccattcaatcctctgccccgcagaatataacagtcaagactcatacggagtcatctgctatctcttctgcagaatcaatcccaaattttcctgtccttgtcagcattcttgcaccaccccttcaggattctgagggccatggtcgtacgcccattgaccttgtgacagttctggatgtcagtggcagcatggaaggcacaaagctttccctactcaagcaagctgtcacatttgtcatacaaaacttagggccttcggatagactttctgtagtttcgttctcatcaagttgtagaagagtctttcctctccagagaatgtctgttgatggccatgaaagtgccatcctagccattgagtctcttagagcaggtggtgcaactaacattgctgaaggactcaagaaaggaattaaggtccttgaagatcgaagggaaagaaacccagtttccagcatcatcctcttatctgatggcatagatacatacaatcgaactgcaaaccgactgttgaaccagttgcctgattcgattcgttctagcaacatgcaacatgaaatcccagtccacacatttggatttggctacgaccatgatcccaacattatgcatgctatatctgatctgtcaggtggtaccttttcgttcattgaatcagttggaatgatacaagactcctttgctctgtgtattggtggtcttctcagtgttgtggctcaggaagttcgcctaacagtaaggtcagcatcgcctggggtgaagattttagcaataccatcagggagacacgtgaatgagatttctgatgagggtcaacaaggtgttgttcacgttggaaatatgtacgcagaagaggagaaacaatttctggtctacctcttagttccagaatcctcaggtccgtatactaagatgtcattgttagatgtgttatgcatgtacaaagatctagcttccaatgaactcatccgggtgcaaggtgagaaaatggagatactgagacctgaggtttgttcccctgctgaaaaggcagtgtctttggaggttgatcggcagcggaacagaattttggtggctgaagctattgctgaggcacaaaggttggctgagatgggaaatattgagggtgcacaggctctactggctcaacggaaagaaattctcttaacatctccagcatcccaagctggggattatcacagtaatttgtttgaaactgagcttagagaaatcatggatagaatggcatctatgaagttgtataaacaaaccgggcgtgcttacgctcttgcaggaatcagttcccataaatcacaaagggccagtgctaggggtgacacaagagcctcctgtctcaattcgggttcagttgtctccaggaagaggggtctccgtagtcgcaacagtacctacagttttgcttcaggtgagttgggtcaaccacctgccgcagttggtgctttcgaaacacctgctatggtcagaatggtaagaaaatcacagaatagaaatcaacctgggccatactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

634

Amino Acids

69.22

Weight (kDa)

6.18

Isoelectric Point (pI)

64.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 737, 1828, 1855
Acc36I ACCTGC 3 cut(s) 737, 1828, 1855
Acc65I GGTACC 1 cut(s) 1010
AccB1I GGYRCC 1 cut(s) 1010
AccI GTMKAC 2 cut(s) 1248, 1280
AciI CCGC 4 cut(s) 39, 395, 1432, 1824
AclWI GGATC 1 cut(s) 965
AcoI YGGCCR 1 cut(s) 706
AcsI RAATTY 5 cut(s) 4, 42, 460, 1440, 1533
AcuI CTGAAG 4 cut(s) 482, 789, 1473, 1782
AcvI CACGTG 1 cut(s) 1165
AfaI GTAC 8 cut(s) 195, 296, 320, 523, 1012, 1220, 1316, 1783
AfiI CCNNNNNNNGG 4 cut(s) 1563, 1564, 1704, 1758
AflIII ACRYGT 1 cut(s) 1162
AgsI TTSAA 5 cut(s) 383, 800, 889, 1028, 1589
AjnI CCWGG 4 cut(s) 201, 1126, 1751, 1891
AjuI GAANNNNNNNTTGG 4 cut(s) 212, 244, 1427, 1459
AluBI AGCT 6 cut(s) 580, 599, 1328, 1457, 1562, 1597
AluI AGCT 6 cut(s) 580, 599, 1328, 1457, 1562, 1597
Alw21I GWGCWC 3 cut(s) 101, 371, 1507
Alw26I GTCTC 6 cut(s) 741, 1153, 1369, 1733, 1753, 1769
Alw44I GTGCAC 2 cut(s) 367, 1503
AlwI GGATC 1 cut(s) 965
Ama87I CYCGRG 1 cut(s) 314
AoxI GGCC 5 cut(s) 511, 626, 706, 1695, 1895
ApaLI GTGCAC 2 cut(s) 367, 1503
ApeKI GCWGC 5 cut(s) 17, 156, 268, 561, 1429
ApoI RAATTY 5 cut(s) 4, 42, 460, 1440, 1533
ArsI GACNNNNNNTTYG 2 cut(s) 1368, 1400
Asp700I GAANNNNTTC 1 cut(s) 1675
Asp718I GGTACC 1 cut(s) 1010
AspS9I GGNCC 6 cut(s) 511, 626, 793, 1274, 1695, 1895
AsuC2I CCSGG 2 cut(s) 1346, 1648
AsuHPI GGTGA 4 cut(s) 1144, 1367, 1721, 1814
AsuII TTCGAA 1 cut(s) 1839
AvaI CYCGRG 1 cut(s) 314
AvaII GGWCC 2 cut(s) 793, 1274
AxyI CCTNAGG 2 cut(s) 1270, 1380
BaeGI GKGCMC 3 cut(s) 236, 371, 1507
BaeI ACNNNNGTAYC 2 cut(s) 302, 335
BalI TGGCCA 1 cut(s) 708
BanI GGYRCC 1 cut(s) 1010
BbrPI CACGTG 1 cut(s) 1165
BbsI GAAGAC 1 cut(s) 1067
Bbv12I GWGCWC 3 cut(s) 101, 371, 1507
BbvCI CCTCAGC 1 cut(s) 1464
BbvI GCAGC 5 cut(s) 4, 143, 280, 573, 1441
BccI CCATC 8 cut(s) 89, 268, 370, 698, 728, 842, 1159, 1480
BcgI CGANNNNNNTGC 2 cut(s) 1829, 1863
BciT130I CCWGG 4 cut(s) 203, 1128, 1753, 1893
BclI TGATCA 1 cut(s) 25
BcnI CCSGG 2 cut(s) 1346, 1648
BcoDI GTCTC 6 cut(s) 741, 1153, 1369, 1733, 1753, 1769
BfaI CTAG 4 cut(s) 725, 915, 1325, 1704
BfmI CTRYAG 3 cut(s) 444, 645, 1786
BfuAI ACCTGC 3 cut(s) 737, 1828, 1855
BglII AGATCT 1 cut(s) 1321
BisI GCNGC 6 cut(s) 18, 157, 269, 562, 1430, 1824
BlpI GCTNAGC 1 cut(s) 71
BlsI GCNGC 6 cut(s) 19, 158, 270, 563, 1431, 1825
BmcAI AGTACT 1 cut(s) 296
Bme1390I CCNGG 6 cut(s) 203, 1128, 1346, 1648, 1753, 1893
Bme18I GGWCC 2 cut(s) 793, 1274
BmeT110I CYCGRG 1 cut(s) 314
BmgT120I GGNCC 6 cut(s) 511, 626, 793, 1274, 1695, 1895
BmiI GGNNCC 2 cut(s) 207, 1012
BmrFI CCNGG 6 cut(s) 203, 1128, 1346, 1648, 1753, 1893
BmrI ACTGGG 2 cut(s) 815, 932
BmsI GCATC 5 cut(s) 29, 840, 1130, 1562, 1631
BmuI ACTGGG 2 cut(s) 815, 932
BpiI GAAGAC 1 cut(s) 1067
BpmI CTGGAG 3 cut(s) 671, 1533, 1735
Bpu10I CCTNAGC 3 cut(s) 327, 1092, 1464
Bpu1102I GCTNAGC 1 cut(s) 71
Bpu14I TTCGAA 1 cut(s) 1839
BpuEI CTTGAG 2 cut(s) 575, 761
BpuMI CCSGG 2 cut(s) 1346, 1648
BsaAI YACGTR 1 cut(s) 1165
BsaI GGTCTC 2 cut(s) 1369, 1769
BsaJI CCNNGG 3 cut(s) 514, 1127, 1892
Bsc4I CCNNNNNNNGG 4 cut(s) 1563, 1564, 1704, 1758
Bse1I ACTGG 5 cut(s) 821, 892, 938, 1521, 1698
Bse21I CCTNAGG 2 cut(s) 1270, 1380
Bse3DI GCAATG 2 cut(s) 118, 762
BseBI CCWGG 4 cut(s) 203, 1128, 1753, 1893
BseDI CCNNGG 3 cut(s) 514, 1127, 1892
BseGI GGATG 7 cut(s) 299, 374, 556, 720, 834, 1341, 1553
BseLI CCNNNNNNNGG 4 cut(s) 1563, 1564, 1704, 1758
BseMI GCAATG 2 cut(s) 118, 762
BseNI ACTGG 5 cut(s) 821, 892, 938, 1521, 1698
BseRI GAGGAG 2 cut(s) 204, 1244
BseSI GKGCMC 3 cut(s) 236, 371, 1507
BseXI GCAGC 5 cut(s) 4, 143, 280, 573, 1441
BseYI CCCAGC 1 cut(s) 1562
BshFI GGCC 5 cut(s) 513, 628, 708, 1697, 1897
BshNI GGYRCC 1 cut(s) 1010
BsiHKAI GWGCWC 3 cut(s) 101, 371, 1507
BsiHKCI CYCGRG 1 cut(s) 314
BsiSI CCGG 2 cut(s) 1345, 1647
BsiWI CGTACG 1 cut(s) 521
BslI CCNNNNNNNGG 4 cut(s) 1563, 1564, 1704, 1758
BsmAI GTCTC 6 cut(s) 741, 1153, 1369, 1733, 1753, 1769
BsmI GAATGC 2 cut(s) 123, 480
BsnI GGCC 5 cut(s) 513, 628, 708, 1697, 1897
Bso31I GGTCTC 2 cut(s) 1369, 1769
BsoBI CYCGRG 1 cut(s) 314
Bsp119I TTCGAA 1 cut(s) 1839
Bsp1286I GDGCHC 4 cut(s) 101, 236, 371, 1507
Bsp1407I TGTACA 1 cut(s) 1314
Bsp143I GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
Bsp1720I GCTNAGC 1 cut(s) 71
Bsp19I CCATGG 1 cut(s) 514
BspACI CCGC 4 cut(s) 39, 395, 1432, 1824
BspANI GGCC 5 cut(s) 513, 628, 708, 1697, 1897
BspLI GGNNCC 2 cut(s) 207, 1012
BspMAI CTGCAG 1 cut(s) 448
BspMI ACCTGC 3 cut(s) 737, 1828, 1855
BspPI GGATC 1 cut(s) 965
BspT104I TTCGAA 1 cut(s) 1839
BspT107I GGYRCC 1 cut(s) 1010
BspTNI GGTCTC 2 cut(s) 1369, 1769
BsrDI GCAATG 2 cut(s) 118, 762
BsrGI TGTACA 1 cut(s) 1314
BsrI ACTGG 5 cut(s) 821, 892, 938, 1521, 1698
BssECI CCNNGG 3 cut(s) 514, 1127, 1892
BssMI GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
BssNAI GTATAC 1 cut(s) 1281
BssT1I CCWWGG 1 cut(s) 514
Bst1107I GTATAC 1 cut(s) 1281
Bst2UI CCWGG 4 cut(s) 203, 1128, 1753, 1893
Bst4CI ACNGT 7 cut(s) 409, 544, 885, 1111, 1577, 1781, 1790
Bst6I CTCTTC 4 cut(s) 445, 667, 1221, 1751
BstAPI GCANNNNNTGC 2 cut(s) 752, 1832
BstAUI TGTACA 1 cut(s) 1314
BstBAI YACGTR 1 cut(s) 1165
BstBI TTCGAA 1 cut(s) 1839
BstC8I GCNNGC 4 cut(s) 101, 597, 987, 1653
BstDSI CCRYGG 1 cut(s) 514
BstF5I GGATG 7 cut(s) 299, 374, 556, 720, 834, 1341, 1553
BstKTI GATC 6 cut(s) 28, 805, 973, 1000, 1324, 1426
BstMAI GTCTC 6 cut(s) 741, 1153, 1369, 1733, 1753, 1769
BstMBI GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
BstNI CCWGG 4 cut(s) 203, 1128, 1753, 1893
BstNSI RCATGY 3 cut(s) 925, 989, 1315
BstSCI CCNGG 6 cut(s) 201, 1126, 1344, 1646, 1751, 1891
BstSFI CTRYAG 3 cut(s) 444, 645, 1786
BstSLI GKGCMC 3 cut(s) 236, 371, 1507
BstV1I GCAGC 5 cut(s) 4, 143, 280, 573, 1441
BstV2I GAAGAC 1 cut(s) 1067
BstX2I RGATCY 1 cut(s) 1321
BstXI CCANNNNNNTGG 2 cut(s) 279, 950
BstYI RGATCY 1 cut(s) 1321
BstZ17I GTATAC 1 cut(s) 1281
Bsu36I CCTNAGG 2 cut(s) 1270, 1380
BsuRI GGCC 5 cut(s) 513, 628, 708, 1697, 1897
BtgI CCRYGG 1 cut(s) 514
BtgZI GCGATG 1 cut(s) 1107
BtsCI GGATG 7 cut(s) 299, 374, 556, 720, 834, 1341, 1553
BtsI GCAGTG 2 cut(s) 87, 1413
BtsIMutI CAGTG 5 cut(s) 87, 562, 1087, 1413, 1705
BveI ACCTGC 3 cut(s) 737, 1828, 1855
Cac8I GCNNGC 4 cut(s) 101, 597, 987, 1653
Cfr13I GGNCC 6 cut(s) 511, 626, 793, 1274, 1695, 1895
Csp6I GTAC 8 cut(s) 194, 295, 319, 522, 1011, 1219, 1315, 1782
CspCI CAANNNNNGTGG 4 cut(s) 101, 136, 158, 193
CviQI GTAC 8 cut(s) 194, 295, 319, 522, 1011, 1219, 1315, 1782
DpnI GATC 6 cut(s) 27, 804, 972, 999, 1323, 1425
DpnII GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
EaeI YGGCCR 1 cut(s) 706
Eam1104I CTCTTC 4 cut(s) 445, 667, 1221, 1751
EarI CTCTTC 4 cut(s) 445, 667, 1221, 1751
Eco130I CCWWGG 1 cut(s) 514
Eco31I GGTCTC 2 cut(s) 1369, 1769
Eco47I GGWCC 2 cut(s) 793, 1274
Eco57I CTGAAG 4 cut(s) 482, 789, 1473, 1782
Eco72I CACGTG 1 cut(s) 1165
Eco81I CCTNAGG 2 cut(s) 1270, 1380
Eco88I CYCGRG 1 cut(s) 314
EcoO109I RGGNCCY 2 cut(s) 626, 793
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 4 cut(s) 201, 1126, 1751, 1891
EcoT14I CCWWGG 1 cut(s) 514
EcoT22I ATGCAT 2 cut(s) 987, 1313
ErhI CCWWGG 1 cut(s) 514
FalI AAGNNNNNCTT 2 cut(s) 135, 167
FauI CCCGC 1 cut(s) 402
FbaI TGATCA 1 cut(s) 25
FblI GTMKAC 2 cut(s) 1248, 1280
Fnu4HI GCNGC 6 cut(s) 18, 157, 269, 562, 1430, 1824
FokI GGATG 7 cut(s) 286, 361, 563, 707, 821, 1328, 1540
Fsp4HI GCNGC 6 cut(s) 18, 157, 269, 562, 1430, 1824
FspBI CTAG 4 cut(s) 725, 915, 1325, 1704
GluI GCNGC 6 cut(s) 18, 157, 269, 562, 1430, 1824
GsaI CCCAGC 1 cut(s) 1566
GsuI CTGGAG 3 cut(s) 671, 1533, 1735
HaeIII GGCC 5 cut(s) 513, 628, 708, 1697, 1897
HapII CCGG 2 cut(s) 1345, 1647
HincII GTYRAC 2 cut(s) 1190, 1814
HindII GTYRAC 2 cut(s) 1190, 1814
HindIII AAGCTT 1 cut(s) 578
HpaII CCGG 2 cut(s) 1345, 1647
HphI GGTGA 4 cut(s) 1144, 1367, 1721, 1814
Hpy166II GTNNAC 8 cut(s) 369, 943, 1190, 1204, 1249, 1281, 1505, 1814
Hpy188III TCNNGA 8 cut(s) 326, 412, 500, 548, 688, 778, 1094, 1262
Hpy8I GTNNAC 8 cut(s) 369, 943, 1190, 1204, 1249, 1281, 1505, 1814
HpyAV CCTTC 6 cut(s) 349, 506, 563, 639, 764, 801
HpyCH4III ACNGT 7 cut(s) 409, 544, 885, 1111, 1577, 1781, 1790
HpyCH4IV ACGT 3 cut(s) 105, 1164, 1206
HpySE526I ACGT 3 cut(s) 105, 1164, 1206
KpnI GGTACC 1 cut(s) 1014
Ksp22I TGATCA 1 cut(s) 25
Kzo9I GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
Lsp1109I GCAGC 5 cut(s) 4, 143, 280, 573, 1441
LweI GCATC 5 cut(s) 29, 840, 1130, 1562, 1631
MaeI CTAG 4 cut(s) 725, 915, 1325, 1704
MaeII ACGT 3 cut(s) 105, 1164, 1206
MaeIII GTNAC 3 cut(s) 538, 601, 1709
MalI GATC 6 cut(s) 27, 804, 972, 999, 1323, 1425
MboI GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
MboII GAAGA 8 cut(s) 76, 432, 684, 812, 1067, 1147, 1238, 1768
MfeI CAATTG 1 cut(s) 34
MflI RGATCY 1 cut(s) 1321
MhlI GDGCHC 4 cut(s) 101, 236, 371, 1507
MlsI TGGCCA 1 cut(s) 708
MluNI TGGCCA 1 cut(s) 708
MlyI GAGTC 6 cut(s) 409, 434, 684, 743, 768, 1043
MmeI TCCRAC 2 cut(s) 1015, 1189
Mox20I TGGCCA 1 cut(s) 708
Mph1103I ATGCAT 2 cut(s) 987, 1313
MroXI GAANNNNTTC 1 cut(s) 1675
MscI TGGCCA 1 cut(s) 708
MseI TTAA 2 cut(s) 789, 1541
MslI CAYNNNNRTG 3 cut(s) 714, 1167, 1346
Msp20I TGGCCA 1 cut(s) 708
MspA1I CMGCKG 1 cut(s) 1432
MspI CCGG 2 cut(s) 1345, 1647
MspR9I CCNGG 6 cut(s) 203, 1128, 1346, 1648, 1753, 1893
MunI CAATTG 1 cut(s) 34
Mva1269I GAATGC 2 cut(s) 123, 480
MvaI CCWGG 4 cut(s) 203, 1128, 1753, 1893
NciI CCSGG 2 cut(s) 1346, 1648
NcoI CCATGG 1 cut(s) 514
NdeII GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
NlaIV GGNNCC 2 cut(s) 207, 1012
NmuCI GTSAC 3 cut(s) 538, 601, 1709
NsiI ATGCAT 2 cut(s) 987, 1313
NspI RCATGY 3 cut(s) 925, 989, 1315
NspV TTCGAA 1 cut(s) 1839
PaeI GCATGC 1 cut(s) 989
PaqCI CACCTGC 3 cut(s) 737, 1828, 1855
PctI GAATGC 2 cut(s) 123, 480
PdmI GAANNNNTTC 1 cut(s) 1675
PfeI GAWTC 7 cut(s) 449, 503, 902, 907, 1028, 1265, 1671
Pfl23II CGTACG 1 cut(s) 521
PfoI TCCNGGA 1 cut(s) 1751
PkrI GCNGC 6 cut(s) 19, 158, 270, 563, 1431, 1825
PleI GAGTC 6 cut(s) 409, 433, 683, 742, 768, 1043
PmaCI CACGTG 1 cut(s) 1165
PmlI CACGTG 1 cut(s) 1165
PpsI GAGTC 6 cut(s) 409, 433, 683, 742, 768, 1043
Ppu21I YACGTR 1 cut(s) 1165
PpuMI RGGWCCY 1 cut(s) 793
Psp5II RGGWCCY 1 cut(s) 793
Psp6I CCWGG 4 cut(s) 201, 1126, 1751, 1891
PspCI CACGTG 1 cut(s) 1165
PspFI CCCAGC 1 cut(s) 1562
PspGI CCWGG 4 cut(s) 201, 1126, 1751, 1891
PspLI CGTACG 1 cut(s) 521
PspN4I GGNNCC 2 cut(s) 207, 1012
PspPI GGNCC 6 cut(s) 511, 626, 793, 1274, 1695, 1895
PspPPI RGGWCCY 1 cut(s) 793
PstI CTGCAG 1 cut(s) 448
PsuI RGATCY 1 cut(s) 1321
RsaI GTAC 8 cut(s) 195, 296, 320, 523, 1012, 1220, 1316, 1783
RsaNI GTAC 8 cut(s) 194, 295, 319, 522, 1011, 1219, 1315, 1782
RseI CAYNNNNRTG 3 cut(s) 714, 1167, 1346
SaqAI TTAA 2 cut(s) 789, 1541
SatI GCNGC 6 cut(s) 18, 157, 269, 562, 1430, 1824
Sau3AI GATC 6 cut(s) 25, 802, 970, 997, 1321, 1423
Sau96I GGNCC 6 cut(s) 511, 626, 793, 1274, 1695, 1895
ScaI AGTACT 1 cut(s) 296
SchI GAGTC 6 cut(s) 409, 434, 684, 743, 768, 1043
ScrFI CCNGG 6 cut(s) 203, 1128, 1346, 1648, 1753, 1893
SduI GDGCHC 4 cut(s) 101, 236, 371, 1507
SfaNI GCATC 5 cut(s) 29, 840, 1130, 1562, 1631
SfcI CTRYAG 3 cut(s) 444, 645, 1786
SfuI TTCGAA 1 cut(s) 1839
SinI GGWCC 2 cut(s) 793, 1274
SmiMI CAYNNNNRTG 3 cut(s) 714, 1167, 1346
SmlI CTYRAG 2 cut(s) 590, 776
SmoI CTYRAG 2 cut(s) 590, 776
SphI GCATGC 1 cut(s) 989
SsiI CCGC 4 cut(s) 39, 395, 1432, 1824
SspI AATATT 1 cut(s) 1495
SspMI CTAG 4 cut(s) 725, 915, 1325, 1704
StyD4I CCNGG 6 cut(s) 201, 1126, 1344, 1646, 1751, 1891
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 7 cut(s) 409, 544, 885, 1111, 1577, 1781, 1790
TaiI ACGT 3 cut(s) 108, 1167, 1209
TaqI TCGA 4 cut(s) 805, 868, 905, 1839
TatI WGTACW 2 cut(s) 294, 1314
TauI GCSGC 1 cut(s) 1826
TfiI GAWTC 7 cut(s) 449, 503, 902, 907, 1028, 1265, 1671
Tru1I TTAA 2 cut(s) 789, 1541
Tru9I TTAA 2 cut(s) 789, 1541
TscAI CASTG 5 cut(s) 94, 562, 1087, 1413, 1705
TseFI GTSAC 3 cut(s) 538, 601, 1709
TseI GCWGC 5 cut(s) 17, 156, 268, 561, 1429
Tsp45I GTSAC 3 cut(s) 538, 601, 1709
TspDTI ATGAA 7 cut(s) 17, 366, 726, 945, 1012, 1350, 1643
TspGWI ACGGA 4 cut(s) 437, 1266, 1540, 1757
TspRI CASTG 5 cut(s) 94, 562, 1087, 1413, 1705
VneI GTGCAC 2 cut(s) 367, 1503
VpaK11BI GGWCC 2 cut(s) 793, 1274
XapI RAATTY 5 cut(s) 4, 42, 460, 1440, 1533
XceI RCATGY 3 cut(s) 925, 989, 1315
XmiI GTMKAC 2 cut(s) 1248, 1280
XmnI GAANNNNTTC 1 cut(s) 1675
XspI CTAG 4 cut(s) 725, 915, 1325, 1704
ZrmI AGTACT 1 cut(s) 296
Zsp2I ATGCAT 2 cut(s) 987, 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.