Rh5CG149600

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000360
Physical Location & Seq
Forward (+)
13759560 .. 13761146
1587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG149600.1

Sequence Viewer

Length: 1587 bp
ATGCAGGAACCCGAGTACCCTCCTGAGCCACCTACCTTCTCTGACGATGAACCTCTCCAATCGTCAACCTCACCTATTCAATCCCTTGTCCCCCGGAAAATAACACTTAAGACTCATACAGAGTCCTCTGCTATCTCTGCGGCAGAATCAAGCCCAAATTTTCCTGTCCTTGTCAGTATTCGTGCACCACACCTTAATGATTCTGAAGGCCATGGTCGTACGCCCATTGACCTCGTAACAGTTTTAGACGTAAGTGGCAGCATGCGAGGCACAAAGATTTCCCTTCTCAAGCAAGCTGTCACATTTGTCATAGAAAACTTGGGGCCTTCGGATAGACTTTCTATTGTTTCGTTCTCATCAAGTTCTAGAAGAGTCTTTCCTCTCCAGAGAATGTCCGTTGATGGTCGTGAAAGTGCCATCCTAGCCATTGAGTCTCTTAGAGCAGGTGGTGCAACTAACATTGCAGAAGGACTGAAGAAAGGAACTAAGGTCCTTGAAGATCGAAGGGAAAGAAACCCAGTTTCCAGCATCATCCTCTTATCTGATGGCAAAGATACATACAATACAACTGCAAACCGACTGTTGAACCAGTTGCCTGATTCGATTCGTTCTAGCAACACGCAACAGGAAACCCCAGTCCACACATTTGGATTTGGCTACGATCATGATCCCAGCATTATGCATGCTATATCTGATGTGTCAGGTGGCACCTTTTCGTTCATTGAATCAGTTGAAATGATACAAGACTCCTTTGCTCTGTGTATTGGGGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGTAAGGTCAGCATCACCTGGGGTGAAGATTTTAGCAATACCATCAGGGAGACATGTGAATGAGATTTCTACTGAGGGTCAGCAAGGTGTTGTTCATGTTGGAAATATGTATGCTGAAGAGGAAAAACAATTTCTGGTCTACCTAACAGTTCCAGAATCGTCAGCTCCGCAGGCGCATACTAAGACGTCATTGTTAGAGGTGTTATGCATGTACAAATATCTAGCTTCAAATGAGTTGATGGAGGTGCAAGGTGAGAAAATAGAGATACTGAGGCCTGAGGTTTGTTCCCCTGCTGAAAAGACAGTTTCTTTGGAGGTTGATCGGCAGCGGAACAGAATATTGGTGGCTGAAGCTATAGCTGAGGCACAAAGGTTGGCTGAGATTGGAAATCTGGAGGGTGCACAGGCTCTTTTGGCTCAACGGAAAGAAATTCTCTCAACATCAACAGCAGCCCAAGCAGGGGATTTTCACAGTAATTTGTTTGAAACTGAGCTTAGAGAAATGATGGATAGAATGGCAAGTATGAAGTTGTATAAACGAACCGGGCGTGCTTACGCTCTCTCAGGACTCAGTTCCCATAAGTTGCAAAGGGCCACAGCTAGGAAGTGTCGCAGGGTTTCCCATAGTGGGGGCTTTGAAGGTCGCAAGGCTTCCGGTGCTTCATCAGGTGCTACTCCAGGTGAATCGCCTGCCGCCGTTGGTGCTTTTGAAACACCTGCTATGGTCAGAATGGTAGAAAAATCACAGAAGAGGAATCAACCTGCGCCAGACCAAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

528

Amino Acids

57.31

Weight (kDa)

6.23

Isoelectric Point (pI)

56.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA_CoxE PF05762 73 - 189 2.2e-07 VWA domain containing CoxE-like protein
VWA PF00092 77 - 245 2.8e-22 von Willebrand factor type A domain
VWA_3 PF13768 77 - 240 2.4e-19 von Willebrand factor type A domain
VWA_2 PF13519 78 - 184 4.4e-19 von Willebrand factor type A domain
Vwaint PF14624 432 - 519 1.7e-12 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 434, 1531
AatII GACGTC 1 cut(s) 995
Acc36I ACCTGC 3 cut(s) 434, 1531, 1576
AccB1I GGYRCC 1 cut(s) 707
AccI GTMKAC 1 cut(s) 945
AciI CCGC 4 cut(s) 140, 974, 1135, 1500
AclWI GGATC 1 cut(s) 662
AcsI RAATTY 2 cut(s) 157, 1236
AcuI CTGAAG 4 cut(s) 225, 494, 942, 1176
AcyI GRCGYC 1 cut(s) 992
AfaI GTAC 3 cut(s) 17, 220, 1019
AfiI CCNNNNNNNGG 5 cut(s) 1266, 1267, 1407, 1434, 1435
AflII CTTAAG 1 cut(s) 107
AflIII ACRYGT 1 cut(s) 859
AgsI TTSAA 9 cut(s) 80, 497, 586, 725, 734, 1035, 1292, 1445, 1517
AjnI CCWGG 2 cut(s) 823, 1483
AjuI GAANNNNNNNTTGG 2 cut(s) 1130, 1162
AluBI AGCT 7 cut(s) 296, 971, 1031, 1160, 1166, 1300, 1406
AluI AGCT 7 cut(s) 296, 971, 1031, 1160, 1166, 1300, 1406
Alw21I GWGCWC 2 cut(s) 187, 1210
Alw26I GTCTC 2 cut(s) 438, 850
Alw44I GTGCAC 2 cut(s) 183, 1206
AlwI GGATC 1 cut(s) 662
Ama87I CYCGRG 1 cut(s) 11
AoxI GGCC 4 cut(s) 208, 323, 1079, 1398
ApaLI GTGCAC 2 cut(s) 183, 1206
ApeKI GCWGC 3 cut(s) 258, 1132, 1256
ApoI RAATTY 2 cut(s) 157, 1236
ArsI GACNNNNNNTTYG 2 cut(s) 1099, 1131
AspLEI GCGC 2 cut(s) 982, 1573
AspS9I GGNCC 3 cut(s) 323, 490, 1398
AsuC2I CCSGG 2 cut(s) 94, 1351
AsuHPI GGTGA 5 cut(s) 63, 813, 841, 1070, 1499
AvaI CYCGRG 1 cut(s) 11
AvaII GGWCC 1 cut(s) 490
AxyI CCTNAGG 1 cut(s) 1083
BaeGI GKGCMC 2 cut(s) 187, 1210
BaeI ACNNNNGTAYC 1 cut(s) 32
BanI GGYRCC 1 cut(s) 707
BbsI GAAGAC 1 cut(s) 764
Bbv12I GWGCWC 2 cut(s) 187, 1210
BbvCI CCTCAGC 1 cut(s) 1167
BbvI GCAGC 3 cut(s) 270, 1144, 1268
BccI CCATC 6 cut(s) 395, 425, 539, 856, 1039, 1306
BceAI ACGGC 1 cut(s) 1487
BciT130I CCWGG 2 cut(s) 825, 1485
BcnI CCSGG 2 cut(s) 94, 1351
BcoDI GTCTC 2 cut(s) 438, 850
BfaI CTAG 5 cut(s) 366, 422, 612, 1028, 1407
BfmI CTRYAG 1 cut(s) 1161
BfrI CTTAAG 1 cut(s) 107
BfuAI ACCTGC 3 cut(s) 434, 1531, 1576
BisI GCNGC 5 cut(s) 141, 259, 1133, 1257, 1500
BlsI GCNGC 5 cut(s) 142, 260, 1134, 1258, 1501
Bme1390I CCNGG 4 cut(s) 94, 825, 1351, 1485
Bme18I GGWCC 1 cut(s) 490
BmeT110I CYCGRG 1 cut(s) 11
BmgT120I GGNCC 3 cut(s) 323, 490, 1398
BmiI GGNNCC 3 cut(s) 9, 324, 709
BmrFI CCNGG 4 cut(s) 94, 825, 1351, 1485
BmrI ACTGGG 2 cut(s) 512, 629
BmsI GCATC 2 cut(s) 537, 827
BmuI ACTGGG 2 cut(s) 512, 629
BpiI GAAGAC 1 cut(s) 764
BpmI CTGGAG 3 cut(s) 368, 1220, 1467
Bpu10I CCTNAGC 3 cut(s) 24, 789, 1167
BpuEI CTTGAG 1 cut(s) 272
BpuMI CCSGG 2 cut(s) 94, 1351
BsaBI GATNNNNATC 1 cut(s) 666
BsaHI GRCGYC 1 cut(s) 992
BsaJI CCNNGG 3 cut(s) 92, 211, 824
BsaWI WCCGGW 1 cut(s) 1460
Bsc4I CCNNNNNNNGG 5 cut(s) 1266, 1267, 1407, 1434, 1435
Bse1I ACTGG 3 cut(s) 518, 589, 635
Bse21I CCTNAGG 1 cut(s) 1083
Bse3DI GCAATG 1 cut(s) 459
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 2 cut(s) 825, 1485
BseDI CCNNGG 3 cut(s) 92, 211, 824
BseGI GGATG 2 cut(s) 417, 531
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 5 cut(s) 1266, 1267, 1407, 1434, 1435
BseMI GCAATG 1 cut(s) 459
BseNI ACTGG 3 cut(s) 518, 589, 635
BseSI GKGCMC 2 cut(s) 187, 1210
BseXI GCAGC 3 cut(s) 270, 1144, 1268
BseYI CCCAGC 1 cut(s) 671
BshFI GGCC 4 cut(s) 210, 325, 1081, 1400
BshNI GGYRCC 1 cut(s) 707
BsiHKAI GWGCWC 2 cut(s) 187, 1210
BsiHKCI CYCGRG 1 cut(s) 11
BsiSI CCGG 3 cut(s) 94, 1350, 1461
BsiWI CGTACG 1 cut(s) 218
BslFI GGGAC 1 cut(s) 74
BslI CCNNNNNNNGG 5 cut(s) 1266, 1267, 1407, 1434, 1435
BsmAI GTCTC 2 cut(s) 438, 850
BsmFI GGGAC 1 cut(s) 74
BsnI GGCC 4 cut(s) 210, 325, 1081, 1400
BsoBI CYCGRG 1 cut(s) 11
Bsp1286I GDGCHC 2 cut(s) 187, 1210
Bsp1407I TGTACA 1 cut(s) 1017
Bsp143I GATC 4 cut(s) 499, 661, 667, 1126
Bsp19I CCATGG 1 cut(s) 211
BspACI CCGC 4 cut(s) 140, 974, 1135, 1500
BspANI GGCC 4 cut(s) 210, 325, 1081, 1400
BspHI TCATGA 1 cut(s) 664
BspLI GGNNCC 3 cut(s) 9, 324, 709
BspMI ACCTGC 3 cut(s) 434, 1531, 1576
BspPI GGATC 1 cut(s) 662
BspT107I GGYRCC 1 cut(s) 707
BspTI CTTAAG 1 cut(s) 107
BsrDI GCAATG 1 cut(s) 459
BsrGI TGTACA 1 cut(s) 1017
BsrI ACTGG 3 cut(s) 518, 589, 635
BssECI CCNNGG 3 cut(s) 92, 211, 824
BssMI GATC 4 cut(s) 499, 661, 667, 1126
BssNI GRCGYC 1 cut(s) 992
BssT1I CCWWGG 1 cut(s) 211
Bst2UI CCWGG 2 cut(s) 825, 1485
Bst4CI ACNGT 6 cut(s) 241, 582, 808, 955, 1111, 1280
Bst6I CTCTTC 3 cut(s) 364, 918, 1550
BstACI GRCGYC 1 cut(s) 992
BstAFI CTTAAG 1 cut(s) 107
BstAPI GCANNNNNTGC 1 cut(s) 449
BstAUI TGTACA 1 cut(s) 1017
BstC8I GCNNGC 6 cut(s) 263, 294, 684, 978, 1356, 1497
BstDSI CCRYGG 1 cut(s) 211
BstF5I GGATG 2 cut(s) 417, 531
BstHHI GCGC 2 cut(s) 982, 1573
BstKTI GATC 4 cut(s) 502, 664, 670, 1129
BstMAI GTCTC 2 cut(s) 438, 850
BstMBI GATC 4 cut(s) 499, 661, 667, 1126
BstMWI GCNNNNNNNGC 9 cut(s) 137, 267, 422, 449, 977, 1220, 1262, 1463, 1508
BstNI CCWGG 2 cut(s) 825, 1485
BstNSI RCATGY 4 cut(s) 265, 686, 863, 1018
BstSCI CCNGG 4 cut(s) 92, 823, 1349, 1483
BstSFI CTRYAG 1 cut(s) 1161
BstSLI GKGCMC 2 cut(s) 187, 1210
BstV1I GCAGC 3 cut(s) 270, 1144, 1268
BstV2I GAAGAC 1 cut(s) 764
BstXI CCANNNNNNTGG 1 cut(s) 647
Bsu36I CCTNAGG 1 cut(s) 1083
BsuRI GGCC 4 cut(s) 210, 325, 1081, 1400
BtgI CCRYGG 1 cut(s) 211
BtsCI GGATG 2 cut(s) 417, 531
BtsIMutI CAGTG 1 cut(s) 784
BveI ACCTGC 3 cut(s) 434, 1531, 1576
Cac8I GCNNGC 6 cut(s) 263, 294, 684, 978, 1356, 1497
CciI TCATGA 1 cut(s) 664
CfoI GCGC 2 cut(s) 982, 1573
Cfr13I GGNCC 3 cut(s) 323, 490, 1398
Csp6I GTAC 3 cut(s) 16, 219, 1018
CviAII CATG 7 cut(s) 212, 262, 665, 683, 860, 902, 1015
CviQI GTAC 3 cut(s) 16, 219, 1018
DpnI GATC 4 cut(s) 501, 663, 669, 1128
DpnII GATC 4 cut(s) 499, 661, 667, 1126
Eam1104I CTCTTC 3 cut(s) 364, 918, 1550
EarI CTCTTC 3 cut(s) 364, 918, 1550
Eco130I CCWWGG 1 cut(s) 211
Eco147I AGGCCT 1 cut(s) 1081
Eco47I GGWCC 1 cut(s) 490
Eco57I CTGAAG 4 cut(s) 225, 494, 942, 1176
Eco81I CCTNAGG 1 cut(s) 1083
Eco88I CYCGRG 1 cut(s) 11
EcoO109I RGGNCCY 2 cut(s) 323, 490
EcoRII CCWGG 2 cut(s) 823, 1483
EcoT14I CCWWGG 1 cut(s) 211
EcoT22I ATGCAT 2 cut(s) 684, 1016
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 7 cut(s) 215, 265, 668, 686, 863, 905, 1018
FaqI GGGAC 1 cut(s) 74
FatI CATG 7 cut(s) 211, 261, 664, 682, 859, 901, 1014
FblI GTMKAC 1 cut(s) 945
Fnu4HI GCNGC 5 cut(s) 141, 259, 1133, 1257, 1500
FokI GGATG 2 cut(s) 404, 518
Fsp4HI GCNGC 5 cut(s) 141, 259, 1133, 1257, 1500
FspBI CTAG 5 cut(s) 366, 422, 612, 1028, 1407
GlaI GCGC 2 cut(s) 981, 1572
GluI GCNGC 5 cut(s) 141, 259, 1133, 1257, 1500
GsaI CCCAGC 1 cut(s) 675
GsuI CTGGAG 3 cut(s) 368, 1220, 1467
HaeIII GGCC 4 cut(s) 210, 325, 1081, 1400
HapII CCGG 3 cut(s) 94, 1350, 1461
HhaI GCGC 2 cut(s) 982, 1573
Hin1I GRCGYC 1 cut(s) 992
Hin1II CATG 7 cut(s) 215, 265, 668, 686, 863, 905, 1018
Hin6I GCGC 2 cut(s) 980, 1571
HinP1I GCGC 2 cut(s) 980, 1571
HincII GTYRAC 1 cut(s) 66
HindII GTYRAC 1 cut(s) 66
HpaII CCGG 3 cut(s) 94, 1350, 1461
HphI GGTGA 5 cut(s) 63, 813, 841, 1070, 1499
Hpy166II GTNNAC 5 cut(s) 66, 185, 640, 946, 1208
Hpy188I TCNGA 6 cut(s) 43, 205, 331, 544, 694, 1535
Hpy188III TCNNGA 9 cut(s) 23, 366, 385, 407, 665, 791, 959, 1199, 1371
Hpy8I GTNNAC 5 cut(s) 66, 185, 640, 946, 1208
HpyAV CCTTC 7 cut(s) 46, 200, 293, 336, 461, 498, 1439
HpyCH4III ACNGT 6 cut(s) 241, 582, 808, 955, 1111, 1280
HpyCH4IV ACGT 2 cut(s) 249, 992
HpyF10VI GCNNNNNNNGC 9 cut(s) 137, 267, 422, 449, 977, 1220, 1262, 1463, 1508
HpySE526I ACGT 2 cut(s) 249, 992
Hsp92I GRCGYC 1 cut(s) 992
Hsp92II CATG 7 cut(s) 215, 265, 668, 686, 863, 905, 1018
HspAI GCGC 2 cut(s) 980, 1571
Kzo9I GATC 4 cut(s) 499, 661, 667, 1126
LmnI GCTCC 1 cut(s) 976
Lsp1109I GCAGC 3 cut(s) 270, 1144, 1268
LweI GCATC 2 cut(s) 537, 827
MaeI CTAG 5 cut(s) 366, 422, 612, 1028, 1407
MaeII ACGT 2 cut(s) 249, 992
MaeIII GTNAC 2 cut(s) 235, 298
MalI GATC 4 cut(s) 501, 663, 669, 1128
MboI GATC 4 cut(s) 499, 661, 667, 1126
MboII GAAGA 7 cut(s) 381, 487, 509, 764, 844, 935, 1567
MhlI GDGCHC 2 cut(s) 187, 1210
MluCI AATT 4 cut(s) 157, 935, 1236, 1282
MlyI GAGTC 6 cut(s) 106, 131, 381, 440, 740, 1368
MmeI TCCRAC 1 cut(s) 886
Mph1103I ATGCAT 2 cut(s) 684, 1016
MseI TTAA 2 cut(s) 108, 195
MslI CAYNNNNRTG 2 cut(s) 195, 864
MspA1I CMGCKG 1 cut(s) 1135
MspCI CTTAAG 1 cut(s) 107
MspI CCGG 3 cut(s) 94, 1350, 1461
MspR9I CCNGG 4 cut(s) 94, 825, 1351, 1485
MvaI CCWGG 2 cut(s) 825, 1485
MwoI GCNNNNNNNGC 9 cut(s) 137, 267, 422, 449, 977, 1220, 1262, 1463, 1508
NciI CCSGG 2 cut(s) 94, 1351
NcoI CCATGG 1 cut(s) 211
NdeII GATC 4 cut(s) 499, 661, 667, 1126
NlaIII CATG 7 cut(s) 215, 265, 668, 686, 863, 905, 1018
NlaIV GGNNCC 3 cut(s) 9, 324, 709
NmuCI GTSAC 1 cut(s) 298
NsiI ATGCAT 2 cut(s) 684, 1016
NspI RCATGY 4 cut(s) 265, 686, 863, 1018
PaeI GCATGC 2 cut(s) 265, 686
PagI TCATGA 1 cut(s) 664
PaqCI CACCTGC 2 cut(s) 434, 1531
PceI AGGCCT 1 cut(s) 1081
PciI ACATGT 1 cut(s) 859
PcsI WCGNNNNNNNCGW 1 cut(s) 1351
PfeI GAWTC 8 cut(s) 146, 200, 599, 604, 725, 962, 1490, 1561
Pfl23II CGTACG 1 cut(s) 218
PflFI GACNNNGTC 1 cut(s) 1580
PkrI GCNGC 5 cut(s) 142, 260, 1134, 1258, 1501
PleI GAGTC 6 cut(s) 106, 130, 380, 439, 740, 1368
PpsI GAGTC 6 cut(s) 106, 130, 380, 439, 740, 1368
PpuMI RGGWCCY 1 cut(s) 490
PscI ACATGT 1 cut(s) 859
Psp5II RGGWCCY 1 cut(s) 490
Psp6I CCWGG 2 cut(s) 823, 1483
PspFI CCCAGC 1 cut(s) 671
PspGI CCWGG 2 cut(s) 823, 1483
PspLI CGTACG 1 cut(s) 218
PspN4I GGNNCC 3 cut(s) 9, 324, 709
PspPI GGNCC 3 cut(s) 323, 490, 1398
PspPPI RGGWCCY 1 cut(s) 490
PsyI GACNNNGTC 1 cut(s) 1580
RsaI GTAC 3 cut(s) 17, 220, 1019
RsaNI GTAC 3 cut(s) 16, 219, 1018
RseI CAYNNNNRTG 2 cut(s) 195, 864
SaqAI TTAA 2 cut(s) 108, 195
SatI GCNGC 5 cut(s) 141, 259, 1133, 1257, 1500
Sau3AI GATC 4 cut(s) 499, 661, 667, 1126
Sau96I GGNCC 3 cut(s) 323, 490, 1398
SchI GAGTC 6 cut(s) 106, 131, 381, 440, 740, 1368
ScrFI CCNGG 4 cut(s) 94, 825, 1351, 1485
SduI GDGCHC 2 cut(s) 187, 1210
SfaNI GCATC 2 cut(s) 537, 827
SfcI CTRYAG 1 cut(s) 1161
SinI GGWCC 1 cut(s) 490
SmiMI CAYNNNNRTG 2 cut(s) 195, 864
SmlI CTYRAG 2 cut(s) 107, 287
SmoI CTYRAG 2 cut(s) 107, 287
SphI GCATGC 2 cut(s) 265, 686
Sse9I AATT 4 cut(s) 157, 935, 1236, 1282
SseBI AGGCCT 1 cut(s) 1081
SsiI CCGC 4 cut(s) 140, 974, 1135, 1500
SspI AATATT 1 cut(s) 1146
SspMI CTAG 5 cut(s) 366, 422, 612, 1028, 1407
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 4 cut(s) 92, 823, 1349, 1483
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 6 cut(s) 241, 582, 808, 955, 1111, 1280
TaiI ACGT 2 cut(s) 252, 995
TaqI TCGA 2 cut(s) 502, 602
TasI AATT 4 cut(s) 157, 935, 1236, 1282
TatI WGTACW 1 cut(s) 1017
TauI GCSGC 2 cut(s) 143, 1502
TfiI GAWTC 8 cut(s) 146, 200, 599, 604, 725, 962, 1490, 1561
Tru1I TTAA 2 cut(s) 108, 195
Tru9I TTAA 2 cut(s) 108, 195
TscAI CASTG 1 cut(s) 784
TseFI GTSAC 1 cut(s) 298
TseI GCWGC 3 cut(s) 258, 1132, 1256
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 5 cut(s) 63, 709, 890, 1346, 1458
TspGWI ACGGA 2 cut(s) 385, 1243
TspRI CASTG 1 cut(s) 784
Tth111I GACNNNGTC 1 cut(s) 1580
Vha464I CTTAAG 1 cut(s) 107
VneI GTGCAC 2 cut(s) 183, 1206
VpaK11BI GGWCC 1 cut(s) 490
XapI RAATTY 2 cut(s) 157, 1236
XbaI TCTAGA 1 cut(s) 365
XceI RCATGY 4 cut(s) 265, 686, 863, 1018
XmiI GTMKAC 1 cut(s) 945
XspI CTAG 5 cut(s) 366, 422, 612, 1028, 1407
ZraI GACGTC 1 cut(s) 993
Zsp2I ATGCAT 2 cut(s) 684, 1016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.