VWA domain containing CoxE-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-C3HC4_2 | PF13923 | 8 - 37 | 2.5e-06 | Zinc finger, C3HC4 type (RING finger) |
| VWA | PF00092 | 193 - 357 | 1.3e-20 | von Willebrand factor type A domain |
| VWA_3 | PF13768 | 193 - 354 | 9.1e-17 | von Willebrand factor type A domain |
| VWA_2 | PF13519 | 194 - 299 | 1.6e-16 | von Willebrand factor type A domain |
| Vwaint | PF14624 | 539 - 656 | 1.3e-10 | VWA / Hh protein intein-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1868 |
| Acc16I | TGCGCA | 1 cut(s) | 532 |
| Acc36I | ACCTGC | 2 cut(s) | 1839, 1868 |
| AccB1I | GGYRCC | 2 cut(s) | 1055, 1880 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 931 |
| AccI | GTMKAC | 3 cut(s) | 576, 1293, 1682 |
| AccII | CGCG | 3 cut(s) | 642, 1781, 1839 |
| AciI | CCGC | 7 cut(s) | 275, 711, 1779, 1812, 1839, 1875, 1913 |
| AclWI | GGATC | 3 cut(s) | 188, 1010, 1977 |
| AcoI | YGGCCR | 1 cut(s) | 556 |
| AcsI | RAATTY | 4 cut(s) | 650, 831, 978, 1485 |
| AcuI | CTGAAG | 2 cut(s) | 660, 1305 |
| AcvI | CACGTG | 1 cut(s) | 1172 |
| AdeI | CACNNNGTG | 1 cut(s) | 1175 |
| AfaI | GTAC | 4 cut(s) | 308, 568, 1361, 1956 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 931, 1608, 1609, 1749, 1919 |
| AflIII | ACRYGT | 1 cut(s) | 1347 |
| AgsI | TTSAA | 7 cut(s) | 545, 690, 749, 845, 1073, 1377, 1646 |
| AhlI | ACTAGT | 1 cut(s) | 1979 |
| AjiI | CACGTC | 1 cut(s) | 1348 |
| AjnI | CCWGG | 2 cut(s) | 363, 441 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 245, 277 |
| AluBI | AGCT | 8 cut(s) | 387, 625, 773, 1319, 1373, 1405, 1642, 1722 |
| AluI | AGCT | 8 cut(s) | 387, 625, 773, 1319, 1373, 1405, 1642, 1722 |
| Alw21I | GWGCWC | 1 cut(s) | 1724 |
| Alw26I | GTCTC | 5 cut(s) | 1265, 1414, 1459, 1498, 1872 |
| AlwI | GGATC | 3 cut(s) | 188, 1010, 1977 |
| Ama87I | CYCGRG | 3 cut(s) | 821, 1602, 1711 |
| AoxI | GGCC | 8 cut(s) | 16, 366, 556, 616, 671, 751, 934, 1554 |
| ApoI | RAATTY | 4 cut(s) | 650, 831, 978, 1485 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1413, 1445 |
| AspLEI | GCGC | 5 cut(s) | 533, 642, 644, 1479, 1839 |
| AspS9I | GGNCC | 5 cut(s) | 367, 671, 838, 934, 1554 |
| AsuC2I | CCSGG | 1 cut(s) | 572 |
| AsuHPI | GGTGA | 5 cut(s) | 194, 203, 411, 1412, 1766 |
| AsuNHI | GCTAGC | 1 cut(s) | 872 |
| AvaI | CYCGRG | 3 cut(s) | 821, 1602, 1711 |
| AvaII | GGWCC | 1 cut(s) | 838 |
| BalI | TGGCCA | 1 cut(s) | 558 |
| BanI | GGYRCC | 2 cut(s) | 1055, 1880 |
| BanII | GRGCYC | 1 cut(s) | 1724 |
| BbrPI | CACGTG | 1 cut(s) | 1172 |
| BbsI | GAAGAC | 1 cut(s) | 1112 |
| Bbv12I | GWGCWC | 1 cut(s) | 1724 |
| BbvCI | CCTCAGC | 2 cut(s) | 222, 1315 |
| BccI | CCATC | 6 cut(s) | 32, 297, 544, 548, 887, 1204 |
| BceAI | ACGGC | 1 cut(s) | 738 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1612, 1646 |
| BciT130I | CCWGG | 2 cut(s) | 365, 443 |
| BcnI | CCSGG | 1 cut(s) | 572 |
| BcoDI | GTCTC | 5 cut(s) | 1265, 1414, 1459, 1498, 1872 |
| BcuI | ACTAGT | 1 cut(s) | 1979 |
| BfaI | CTAG | 8 cut(s) | 384, 714, 873, 1370, 1406, 1749, 1916, 1980 |
| BfmI | CTRYAG | 5 cut(s) | 489, 1440, 1503, 1733, 1832 |
| BfuAI | ACCTGC | 2 cut(s) | 1839, 1868 |
| BglII | AGATCT | 1 cut(s) | 1366 |
| BmcAI | AGTACT | 1 cut(s) | 308 |
| Bme1390I | CCNGG | 3 cut(s) | 365, 443, 572 |
| Bme18I | GGWCC | 1 cut(s) | 838 |
| BmeT110I | CYCGRG | 3 cut(s) | 821, 1602, 1711 |
| BmgBI | CACGTC | 1 cut(s) | 1348 |
| BmgT120I | GGNCC | 5 cut(s) | 367, 671, 838, 934, 1554 |
| BmiI | GGNNCC | 6 cut(s) | 369, 672, 839, 863, 1057, 1882 |
| BmrFI | CCNGG | 3 cut(s) | 365, 443, 572 |
| BmrI | ACTGGG | 3 cut(s) | 318, 860, 1701 |
| BmsI | GCATC | 6 cut(s) | 885, 1055, 1175, 1383, 1603, 1913 |
| BmtI | GCTAGC | 1 cut(s) | 876 |
| BmuI | ACTGGG | 3 cut(s) | 318, 860, 1701 |
| BpiI | GAAGAC | 1 cut(s) | 1112 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1566, 1598 |
| BpmI | CTGGAG | 1 cut(s) | 1562 |
| Bpu10I | CCTNAGC | 4 cut(s) | 222, 1137, 1315, 1797 |
| BpuMI | CCSGG | 1 cut(s) | 572 |
| BsaAI | YACGTR | 1 cut(s) | 1172 |
| BsaI | GGTCTC | 2 cut(s) | 1414, 1498 |
| BsaJI | CCNNGG | 7 cut(s) | 206, 363, 441, 442, 474, 559, 570 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 931, 1608, 1609, 1749, 1919 |
| Bse1I | ACTGG | 5 cut(s) | 161, 324, 866, 983, 1696 |
| Bse3DI | GCAATG | 1 cut(s) | 1907 |
| BseBI | CCWGG | 2 cut(s) | 365, 443 |
| BseDI | CCNNGG | 7 cut(s) | 206, 363, 441, 442, 474, 559, 570 |
| BseGI | GGATG | 3 cut(s) | 499, 601, 1618 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 931, 1608, 1609, 1749, 1919 |
| BseMI | GCAATG | 1 cut(s) | 1907 |
| BseNI | ACTGG | 5 cut(s) | 161, 324, 866, 983, 1696 |
| BsePI | GCGCGC | 1 cut(s) | 640 |
| BseRI | GAGGAG | 1 cut(s) | 1289 |
| BseYI | CCCAGC | 2 cut(s) | 375, 1814 |
| BsgI | GTGCAG | 1 cut(s) | 374 |
| Bsh1236I | CGCG | 3 cut(s) | 642, 1781, 1839 |
| Bsh1285I | CGRYCG | 1 cut(s) | 576 |
| BshFI | GGCC | 8 cut(s) | 18, 368, 558, 618, 673, 753, 936, 1556 |
| BshNI | GGYRCC | 2 cut(s) | 1055, 1880 |
| BsiEI | CGRYCG | 1 cut(s) | 576 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1724 |
| BsiHKCI | CYCGRG | 3 cut(s) | 821, 1602, 1711 |
| BsiSI | CCGG | 1 cut(s) | 572 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 931, 1608, 1609, 1749, 1919 |
| BsmAI | GTCTC | 5 cut(s) | 1265, 1414, 1459, 1498, 1872 |
| BsnI | GGCC | 8 cut(s) | 18, 368, 558, 618, 673, 753, 936, 1556 |
| Bso31I | GGTCTC | 2 cut(s) | 1414, 1498 |
| BsoBI | CYCGRG | 3 cut(s) | 821, 1602, 1711 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1724 |
| Bsp1407I | TGTACA | 1 cut(s) | 1359 |
| Bsp143I | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| Bsp19I | CCATGG | 2 cut(s) | 206, 559 |
| BspACI | CCGC | 7 cut(s) | 275, 711, 1779, 1812, 1839, 1875, 1913 |
| BspANI | GGCC | 8 cut(s) | 18, 368, 558, 618, 673, 753, 936, 1556 |
| BspFNI | CGCG | 3 cut(s) | 642, 1781, 1839 |
| BspLI | GGNNCC | 6 cut(s) | 369, 672, 839, 863, 1057, 1882 |
| BspMAI | CTGCAG | 4 cut(s) | 493, 1444, 1737, 1836 |
| BspMI | ACCTGC | 2 cut(s) | 1839, 1868 |
| BspOI | GCTAGC | 1 cut(s) | 876 |
| BspPI | GGATC | 3 cut(s) | 188, 1010, 1977 |
| BspT107I | GGYRCC | 2 cut(s) | 1055, 1880 |
| BspTNI | GGTCTC | 2 cut(s) | 1414, 1498 |
| BsrDI | GCAATG | 1 cut(s) | 1907 |
| BsrGI | TGTACA | 1 cut(s) | 1359 |
| BsrI | ACTGG | 5 cut(s) | 161, 324, 866, 983, 1696 |
| BssECI | CCNNGG | 7 cut(s) | 206, 363, 441, 442, 474, 559, 570 |
| BssHII | GCGCGC | 1 cut(s) | 640 |
| BssMI | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| BssNAI | GTATAC | 1 cut(s) | 1683 |
| BssT1I | CCWWGG | 3 cut(s) | 206, 474, 559 |
| Bst1107I | GTATAC | 1 cut(s) | 1683 |
| Bst2UI | CCWGG | 2 cut(s) | 365, 443 |
| Bst4CI | ACNGT | 5 cut(s) | 589, 683, 911, 930, 1156 |
| Bst6I | CTCTTC | 4 cut(s) | 546, 712, 1266, 1567 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1613 |
| BstAUI | TGTACA | 1 cut(s) | 1359 |
| BstBAI | YACGTR | 1 cut(s) | 1172 |
| BstC8I | GCNNGC | 8 cut(s) | 642, 771, 874, 945, 1032, 1235, 1475, 1698 |
| BstDSI | CCRYGG | 2 cut(s) | 206, 559 |
| BstF5I | GGATG | 3 cut(s) | 499, 601, 1618 |
| BstFNI | CGCG | 3 cut(s) | 642, 1781, 1839 |
| BstHHI | GCGC | 5 cut(s) | 533, 642, 644, 1479, 1839 |
| BstKTI | GATC | 6 cut(s) | 196, 1018, 1369, 1447, 1471, 1972 |
| BstMAI | GTCTC | 5 cut(s) | 1265, 1414, 1459, 1498, 1872 |
| BstMBI | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| BstMCI | CGRYCG | 1 cut(s) | 576 |
| BstNI | CCWGG | 2 cut(s) | 365, 443 |
| BstNSI | RCATGY | 2 cut(s) | 613, 1034 |
| BstSCI | CCNGG | 3 cut(s) | 363, 441, 570 |
| BstSFI | CTRYAG | 5 cut(s) | 489, 1440, 1503, 1733, 1832 |
| BstUI | CGCG | 3 cut(s) | 642, 1781, 1839 |
| BstV2I | GAAGAC | 1 cut(s) | 1112 |
| BstX2I | RGATCY | 2 cut(s) | 1366, 1969 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 156, 811, 995 |
| BstYI | RGATCY | 2 cut(s) | 1366, 1969 |
| BstZ17I | GTATAC | 1 cut(s) | 1683 |
| BsuRI | GGCC | 8 cut(s) | 18, 368, 558, 618, 673, 753, 936, 1556 |
| BtgI | CCRYGG | 2 cut(s) | 206, 559 |
| BtrI | CACGTC | 1 cut(s) | 1348 |
| BtsCI | GGATG | 3 cut(s) | 499, 601, 1618 |
| BtsI | GCAGTG | 2 cut(s) | 30, 1730 |
| BtsIMutI | CAGTG | 4 cut(s) | 30, 1132, 1689, 1730 |
| BveI | ACCTGC | 2 cut(s) | 1839, 1868 |
| Cac8I | GCNNGC | 8 cut(s) | 642, 771, 874, 945, 1032, 1235, 1475, 1698 |
| CfoI | GCGC | 5 cut(s) | 533, 642, 644, 1479, 1839 |
| Cfr13I | GGNCC | 5 cut(s) | 367, 671, 838, 934, 1554 |
| Csp6I | GTAC | 4 cut(s) | 307, 567, 1360, 1955 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 44, 79, 220, 255, 1873, 1908 |
| CviQI | GTAC | 4 cut(s) | 307, 567, 1360, 1955 |
| DpnI | GATC | 6 cut(s) | 195, 1017, 1368, 1446, 1470, 1971 |
| DpnII | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| DraIII | CACNNNGTG | 1 cut(s) | 1175 |
| EaeI | YGGCCR | 1 cut(s) | 556 |
| Eam1104I | CTCTTC | 4 cut(s) | 546, 712, 1266, 1567 |
| EarI | CTCTTC | 4 cut(s) | 546, 712, 1266, 1567 |
| Ecl136II | GAGCTC | 1 cut(s) | 1722 |
| Eco130I | CCWWGG | 3 cut(s) | 206, 474, 559 |
| Eco24I | GRGCYC | 1 cut(s) | 1724 |
| Eco31I | GGTCTC | 2 cut(s) | 1414, 1498 |
| Eco32I | GATATC | 1 cut(s) | 509 |
| Eco47I | GGWCC | 1 cut(s) | 838 |
| Eco53kI | GAGCTC | 1 cut(s) | 1722 |
| Eco57I | CTGAAG | 2 cut(s) | 660, 1305 |
| Eco72I | CACGTG | 1 cut(s) | 1172 |
| Eco88I | CYCGRG | 3 cut(s) | 821, 1602, 1711 |
| EcoICRI | GAGCTC | 1 cut(s) | 1722 |
| EcoO109I | RGGNCCY | 3 cut(s) | 367, 671, 838 |
| EcoRI | GAATTC | 1 cut(s) | 831 |
| EcoRII | CCWGG | 2 cut(s) | 363, 441 |
| EcoRV | GATATC | 1 cut(s) | 509 |
| EcoT14I | CCWWGG | 3 cut(s) | 206, 474, 559 |
| EcoT22I | ATGCAT | 2 cut(s) | 1032, 1048 |
| EcoT38I | GRGCYC | 1 cut(s) | 1724 |
| ErhI | CCWWGG | 3 cut(s) | 206, 474, 559 |
| FauI | CCCGC | 1 cut(s) | 282 |
| FblI | GTMKAC | 3 cut(s) | 576, 1293, 1682 |
| FokI | GGATG | 3 cut(s) | 486, 608, 1625 |
| FriOI | GRGCYC | 1 cut(s) | 1724 |
| FspBI | CTAG | 8 cut(s) | 384, 714, 873, 1370, 1406, 1749, 1916, 1980 |
| FspI | TGCGCA | 1 cut(s) | 532 |
| GlaI | GCGC | 5 cut(s) | 532, 641, 643, 1478, 1838 |
| GsaI | CCCAGC | 2 cut(s) | 379, 1818 |
| GsuI | CTGGAG | 1 cut(s) | 1562 |
| HaeIII | GGCC | 8 cut(s) | 18, 368, 558, 618, 673, 753, 936, 1556 |
| HapII | CCGG | 1 cut(s) | 572 |
| HhaI | GCGC | 5 cut(s) | 533, 642, 644, 1479, 1839 |
| Hin6I | GCGC | 5 cut(s) | 531, 640, 642, 1477, 1837 |
| HinP1I | GCGC | 5 cut(s) | 531, 640, 642, 1477, 1837 |
| HincII | GTYRAC | 2 cut(s) | 577, 1249 |
| HindII | GTYRAC | 2 cut(s) | 577, 1249 |
| HindIII | AAGCTT | 1 cut(s) | 623 |
| HpaII | CCGG | 1 cut(s) | 572 |
| HphI | GGTGA | 5 cut(s) | 194, 203, 411, 1412, 1766 |
| Hpy166II | GTNNAC | 7 cut(s) | 414, 577, 988, 1249, 1294, 1360, 1683 |
| Hpy188III | TCNNGA | 9 cut(s) | 73, 545, 593, 823, 1139, 1390, 1541, 1646, 1713 |
| Hpy8I | GTNNAC | 7 cut(s) | 414, 577, 988, 1249, 1294, 1360, 1683 |
| HpyAV | CCTTC | 6 cut(s) | 61, 348, 352, 684, 743, 846 |
| HpyCH4III | ACNGT | 5 cut(s) | 589, 683, 911, 930, 1156 |
| HpyCH4IV | ACGT | 3 cut(s) | 1171, 1251, 1347 |
| HpySE526I | ACGT | 3 cut(s) | 1171, 1251, 1347 |
| HspAI | GCGC | 5 cut(s) | 531, 640, 642, 1477, 1837 |
| Kzo9I | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| LmnI | GCTCC | 1 cut(s) | 1187 |
| LweI | GCATC | 6 cut(s) | 885, 1055, 1175, 1383, 1603, 1913 |
| MaeI | CTAG | 8 cut(s) | 384, 714, 873, 1370, 1406, 1749, 1916, 1980 |
| MaeII | ACGT | 3 cut(s) | 1171, 1251, 1347 |
| MaeIII | GTNAC | 3 cut(s) | 583, 694, 1754 |
| MalI | GATC | 6 cut(s) | 195, 1017, 1368, 1446, 1470, 1971 |
| MboI | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| MfeI | CAATTG | 1 cut(s) | 938 |
| MflI | RGATCY | 2 cut(s) | 1366, 1969 |
| MhlI | GDGCHC | 1 cut(s) | 1724 |
| MlsI | TGGCCA | 1 cut(s) | 558 |
| MluNI | TGGCCA | 1 cut(s) | 558 |
| MlyI | GAGTC | 7 cut(s) | 454, 479, 729, 813, 1267, 1558, 1906 |
| MmeI | TCCRAC | 2 cut(s) | 169, 308 |
| Mox20I | TGGCCA | 1 cut(s) | 558 |
| Mph1103I | ATGCAT | 2 cut(s) | 1032, 1048 |
| MscI | TGGCCA | 1 cut(s) | 558 |
| MseI | TTAA | 3 cut(s) | 456, 1385, 1586 |
| Msp20I | TGGCCA | 1 cut(s) | 558 |
| MspA1I | CMGCKG | 1 cut(s) | 1814 |
| MspI | CCGG | 1 cut(s) | 572 |
| MspR9I | CCNGG | 3 cut(s) | 365, 443, 572 |
| MunI | CAATTG | 1 cut(s) | 938 |
| MvaI | CCWGG | 2 cut(s) | 365, 443 |
| MvnI | CGCG | 3 cut(s) | 642, 1781, 1839 |
| NciI | CCSGG | 1 cut(s) | 572 |
| NcoI | CCATGG | 2 cut(s) | 206, 559 |
| NdeII | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| NheI | GCTAGC | 1 cut(s) | 872 |
| NlaIV | GGNNCC | 6 cut(s) | 369, 672, 839, 863, 1057, 1882 |
| NmeAIII | GCCGAG | 1 cut(s) | 137 |
| NmuCI | GTSAC | 2 cut(s) | 583, 1754 |
| NsbI | TGCGCA | 1 cut(s) | 532 |
| NsiI | ATGCAT | 2 cut(s) | 1032, 1048 |
| NspI | RCATGY | 2 cut(s) | 613, 1034 |
| PaeI | GCATGC | 1 cut(s) | 1034 |
| PaeR7I | CTCGAG | 1 cut(s) | 821 |
| PaqCI | CACCTGC | 1 cut(s) | 1868 |
| PasI | CCCWGGG | 1 cut(s) | 442 |
| PauI | GCGCGC | 1 cut(s) | 640 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1353 |
| PfeI | GAWTC | 5 cut(s) | 494, 902, 952, 1073, 1094 |
| PflFI | GACNNNGTC | 1 cut(s) | 469 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 931 |
| PleI | GAGTC | 7 cut(s) | 454, 478, 728, 813, 1266, 1558, 1905 |
| PmaCI | CACGTG | 1 cut(s) | 1172 |
| PmlI | CACGTG | 1 cut(s) | 1172 |
| PpsI | GAGTC | 7 cut(s) | 454, 478, 728, 813, 1266, 1558, 1905 |
| Ppu21I | YACGTR | 1 cut(s) | 1172 |
| PpuMI | RGGWCCY | 1 cut(s) | 838 |
| Psp124BI | GAGCTC | 1 cut(s) | 1724 |
| Psp5II | RGGWCCY | 1 cut(s) | 838 |
| Psp6I | CCWGG | 2 cut(s) | 363, 441 |
| PspCI | CACGTG | 1 cut(s) | 1172 |
| PspFI | CCCAGC | 2 cut(s) | 375, 1814 |
| PspGI | CCWGG | 2 cut(s) | 363, 441 |
| PspN4I | GGNNCC | 6 cut(s) | 369, 672, 839, 863, 1057, 1882 |
| PspPI | GGNCC | 5 cut(s) | 367, 671, 838, 934, 1554 |
| PspPPI | RGGWCCY | 1 cut(s) | 838 |
| PstI | CTGCAG | 4 cut(s) | 493, 1444, 1737, 1836 |
| PsuI | RGATCY | 2 cut(s) | 1366, 1969 |
| PsyI | GACNNNGTC | 1 cut(s) | 469 |
| PteI | GCGCGC | 1 cut(s) | 640 |
| RsaI | GTAC | 4 cut(s) | 308, 568, 1361, 1956 |
| RsaNI | GTAC | 4 cut(s) | 307, 567, 1360, 1955 |
| SacI | GAGCTC | 1 cut(s) | 1724 |
| SalI | GTCGAC | 1 cut(s) | 575 |
| SaqAI | TTAA | 3 cut(s) | 456, 1385, 1586 |
| Sau3AI | GATC | 6 cut(s) | 193, 1015, 1366, 1444, 1468, 1969 |
| Sau96I | GGNCC | 5 cut(s) | 367, 671, 838, 934, 1554 |
| ScaI | AGTACT | 1 cut(s) | 308 |
| SchI | GAGTC | 7 cut(s) | 454, 479, 729, 813, 1267, 1558, 1906 |
| ScrFI | CCNGG | 3 cut(s) | 365, 443, 572 |
| SduI | GDGCHC | 1 cut(s) | 1724 |
| SfaNI | GCATC | 6 cut(s) | 885, 1055, 1175, 1383, 1603, 1913 |
| SfcI | CTRYAG | 5 cut(s) | 489, 1440, 1503, 1733, 1832 |
| Sfr274I | CTCGAG | 1 cut(s) | 821 |
| SinI | GGWCC | 1 cut(s) | 838 |
| SlaI | CTCGAG | 1 cut(s) | 821 |
| SmlI | CTYRAG | 1 cut(s) | 821 |
| SmoI | CTYRAG | 1 cut(s) | 821 |
| SpeI | ACTAGT | 1 cut(s) | 1979 |
| SphI | GCATGC | 1 cut(s) | 1034 |
| SsiI | CCGC | 7 cut(s) | 275, 711, 1779, 1812, 1839, 1875, 1913 |
| SspMI | CTAG | 8 cut(s) | 384, 714, 873, 1370, 1406, 1749, 1916, 1980 |
| SstI | GAGCTC | 1 cut(s) | 1724 |
| StyD4I | CCNGG | 3 cut(s) | 363, 441, 570 |
| StyI | CCWWGG | 3 cut(s) | 206, 474, 559 |
| TaaI | ACNGT | 5 cut(s) | 589, 683, 911, 930, 1156 |
| TaiI | ACGT | 3 cut(s) | 1174, 1254, 1350 |
| TaqI | TCGA | 4 cut(s) | 576, 822, 950, 1632 |
| TaqII | GACCGA | 1 cut(s) | 482 |
| TatI | WGTACW | 2 cut(s) | 306, 1359 |
| TauI | GCSGC | 1 cut(s) | 1915 |
| TfiI | GAWTC | 5 cut(s) | 494, 902, 952, 1073, 1094 |
| Tru1I | TTAA | 3 cut(s) | 456, 1385, 1586 |
| Tru9I | TTAA | 3 cut(s) | 456, 1385, 1586 |
| TscAI | CASTG | 4 cut(s) | 37, 1132, 1696, 1737 |
| TseFI | GTSAC | 2 cut(s) | 583, 1754 |
| Tsp45I | GTSAC | 2 cut(s) | 583, 1754 |
| TspDTI | ATGAA | 5 cut(s) | 414, 990, 1758, 1794, 1944 |
| TspRI | CASTG | 4 cut(s) | 37, 1132, 1696, 1737 |
| Tth111I | GACNNNGTC | 1 cut(s) | 469 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 931 |
| VpaK11BI | GGWCC | 1 cut(s) | 838 |
| XapI | RAATTY | 4 cut(s) | 650, 831, 978, 1485 |
| XceI | RCATGY | 2 cut(s) | 613, 1034 |
| XhoI | CTCGAG | 1 cut(s) | 821 |
| XmiI | GTMKAC | 3 cut(s) | 576, 1293, 1682 |
| XspI | CTAG | 8 cut(s) | 384, 714, 873, 1370, 1406, 1749, 1916, 1980 |
| ZrmI | AGTACT | 1 cut(s) | 308 |
| Zsp2I | ATGCAT | 2 cut(s) | 1032, 1048 |