Rw5G012380

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000360
Physical Location & Seq
Forward (+)
14576885 .. 14580139
3255 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G012380.1

Sequence Viewer

Length: 1980 bp
ATGGAAAACCAGAGACATTGTGGTTATCTAAGAAAACCCAACCATCATGGTCAGTCTTATCTCCTTAATTATTATCACGATGGCTGCCATTGTTTGCTTTCTTTTAACAATTGCGGAATTTGCAGGAGTAGCTTGACAAGAGGGCTAAGCGAAGCCATCTTCACTGCTGAGTGCTCGCACGTTTTCCACTACCATTGCATTCTCAAAAATGTCCAGCAAGGAAATCTTTGCTGCCCTGTCTGCCAAGCAAAGTGGAATAAGGATAATGTACCTTTCCAGGTTCCCCCTCCTCAGAACAACAACTTGGGCACAATCCCTTGTCATTTCACATTCCCATCACAGCAGCCACCCCATTGGTTCTATCCTCAGTACTCATCCATGCCAGAACCCGAGTACCCTCCTGAGCCACCTACCTTCTCTGACGATGAACCTCTCCCATCGTGCACCTCATCCATTCAATCCTCTGCCCCGCAGAATATAACAGTCAAGACTCATACGGAGTCATCTGCTATCTCTTCTGCAGAATCAATCCCAAATTTTCCTGTCCTTGTCAGCATTCTTGCACCACCCCTTCAGGATTCTGAGGGCCATGGTCGTACGCCCATTGACCTTGTGACAGTTCTGGATGTCAGTGGCAACATGGAAGGCACAAAGCTTTCCCTACTCAAGCAAGCTGTCACATTTGTCATACAAAACTTAGGGCCTTCGGATAGACTTTCTGTAGTTTCGTTCTCATCAAGTTGTAGAAGAGTCTTTCCTCTCCAGAGAATGTCTGTTGATGGCCATGAAAGTGCCATCCTAGCCATTGAGTCTCTTAGAGCAGGTGGTGCAACTAACATTGCTGAAGGACTCAAGAAAGGAATTAAGGTCCTTGAAGATCGAAGGGAAAGAAACCCAGTTTCCAGCATCATCCTCTTATCTGATGGCATAGATACATACAATCGAACTGCAAACCGACTGTTGAACCAGTTGCCTGATTCGATTCGTTCTAGCAACATGCAACATGAAATCCCAGTCCACACATTTGGATTTGGCTACGACCATGATCCCAACATTATGCATGCTATATCTGATCTGTCAGGTGGTACCTTTTCGTTCATTGAATCAGTTGGAATGATACAAGACTCCTTTGCTCTGTGTATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGTAAGGTCAGCATCGCCTGGGGTGAAGATTTTAGCAATACCATCAGGGAGACACGTGAATGAGATTTCTGATGAGGGTCAACAAGGTGTTGTTCACGTTGGAAATATGTACGCAGAAGAGGAGAAACAATTTCTGGTCTACCTCTTAGTTCCAGAATCCTCAGGTCCGTATACTAAGATGTCATTGTTAGATGTGTTATGCATGTACAAAGATCTAGCTTCCAATGAACTCATCCGGGTGCAAGGTGAGAAAATGGAGATACTGAGACCCGAGGTTTGTTCCCCTGCTGAAAAGGCAGTGTCTTTGGAGGTTGATCGGCAGCGGAACAGAATTTTGGTGGCTGAAGCTATTGCTGAGGCACAAAGGTTGGCTGAGATGGGAAATATTGAGGGTGCACAGGCTCTACTGGCTCAACGGAAAGAAATTCTCTTAACATCTCCAGCATCCCAAGCTGGGGATTATCACAGTAATTTGTTTGAAACTGAGCTTAGAGAAATCATGGATAGAATGGCATCTATGAAGTTGTATAAACAAACCGGGCGTGCTTACGCTCTTGCAGGAATCAGTTCCCATAAATCACAAAGGGCCAGTGCTAGGGGTGACACAAGAGCCTCCTGTCTCAATTCGGGTTCAGTTGTCTCCAGGAAGAGGGGTCTCCGTAGTCGCAACAGTACCTACAGTTTTGCTTCAGGTGAGTTGGGTCAACCACCTGCCGCAGTTGGTGCTTTCGAAACACCTGCTATGGTCAGAATGGTAAGAAAATCACAGAATAGAAATCAACCTGGGCCATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

659

Amino Acids

72.44

Weight (kDa)

6.61

Isoelectric Point (pI)

63.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 36 - 82 6.2e-06 Ring finger domain
zf-RING_11 PF17123 37 - 67 1.4e-07 RING-like zinc finger
zf-C3HC4_2 PF13923 38 - 81 5.2e-06 Zinc finger, C3HC4 type (RING finger)
VWA_CoxE PF05762 199 - 324 5.8e-07 VWA domain containing CoxE-like protein
VWA PF00092 203 - 368 4.3e-21 von Willebrand factor type A domain
VWA_3 PF13768 203 - 366 4.3e-18 von Willebrand factor type A domain
VWA_2 PF13519 204 - 309 1.6e-17 von Willebrand factor type A domain
WAV3_C PF25243 499 - 566 2.1e-06 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 555 - 651 6.3e-10 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 812, 1903, 1930
Acc36I ACCTGC 3 cut(s) 812, 1903, 1930
Acc65I GGTACC 1 cut(s) 1085
AccB1I GGYRCC 1 cut(s) 1085
AccI GTMKAC 2 cut(s) 1323, 1355
AciI CCGC 4 cut(s) 114, 470, 1507, 1899
AclWI GGATC 1 cut(s) 1040
AcoI YGGCCR 1 cut(s) 781
AcsI RAATTY 4 cut(s) 117, 535, 1515, 1608
AcuI CTGAAG 4 cut(s) 557, 864, 1548, 1857
AcvI CACGTG 1 cut(s) 1240
AfaI GTAC 8 cut(s) 270, 371, 395, 598, 1087, 1295, 1391, 1858
AfiI CCNNNNNNNGG 4 cut(s) 1638, 1639, 1779, 1833
AflIII ACRYGT 1 cut(s) 1237
AgsI TTSAA 5 cut(s) 458, 875, 964, 1103, 1664
AjnI CCWGG 4 cut(s) 276, 1201, 1826, 1966
AjuI GAANNNNNNNTTGG 4 cut(s) 287, 319, 1502, 1534
AluBI AGCT 7 cut(s) 132, 655, 674, 1403, 1532, 1637, 1672
AluI AGCT 7 cut(s) 132, 655, 674, 1403, 1532, 1637, 1672
Alw21I GWGCWC 3 cut(s) 176, 446, 1582
Alw26I GTCTC 7 cut(s) 7, 816, 1228, 1444, 1808, 1828, 1844
Alw44I GTGCAC 2 cut(s) 442, 1578
AlwI GGATC 1 cut(s) 1040
Ama87I CYCGRG 2 cut(s) 389, 1454
AoxI GGCC 5 cut(s) 586, 701, 781, 1770, 1970
ApaLI GTGCAC 2 cut(s) 442, 1578
ApeKI GCWGC 4 cut(s) 84, 231, 343, 1504
ApoI RAATTY 4 cut(s) 117, 535, 1515, 1608
ArsI GACNNNNNNTTYG 2 cut(s) 1443, 1475
Asp700I GAANNNNTTC 1 cut(s) 1750
Asp718I GGTACC 1 cut(s) 1085
AspS9I GGNCC 6 cut(s) 586, 701, 868, 1349, 1770, 1970
AsuC2I CCSGG 2 cut(s) 1421, 1723
AsuHPI GGTGA 4 cut(s) 1219, 1442, 1796, 1889
AsuII TTCGAA 1 cut(s) 1914
AvaI CYCGRG 2 cut(s) 389, 1454
AvaII GGWCC 2 cut(s) 868, 1349
AxyI CCTNAGG 1 cut(s) 1345
BaeGI GKGCMC 3 cut(s) 311, 446, 1582
BaeI ACNNNNGTAYC 2 cut(s) 377, 410
BalI TGGCCA 1 cut(s) 783
BanI GGYRCC 1 cut(s) 1085
BbrPI CACGTG 1 cut(s) 1240
BbsI GAAGAC 1 cut(s) 1142
Bbv12I GWGCWC 3 cut(s) 176, 446, 1582
BbvCI CCTCAGC 1 cut(s) 1539
BbvI GCAGC 4 cut(s) 71, 218, 355, 1516
BcgI CGANNNNNNTGC 2 cut(s) 1904, 1938
BciT130I CCWGG 4 cut(s) 278, 1203, 1828, 1968
BcnI CCSGG 2 cut(s) 1421, 1723
BcoDI GTCTC 7 cut(s) 7, 816, 1228, 1444, 1808, 1828, 1844
BfaI CTAG 4 cut(s) 800, 990, 1400, 1779
BfmI CTRYAG 3 cut(s) 519, 720, 1861
BfuAI ACCTGC 3 cut(s) 812, 1903, 1930
BglII AGATCT 1 cut(s) 1396
BisI GCNGC 5 cut(s) 85, 232, 344, 1505, 1899
BlpI GCTNAGC 1 cut(s) 146
BlsI GCNGC 5 cut(s) 86, 233, 345, 1506, 1900
BmcAI AGTACT 1 cut(s) 371
Bme1390I CCNGG 6 cut(s) 278, 1203, 1421, 1723, 1828, 1968
Bme18I GGWCC 2 cut(s) 868, 1349
BmeT110I CYCGRG 2 cut(s) 389, 1454
BmgT120I GGNCC 6 cut(s) 586, 701, 868, 1349, 1770, 1970
BmiI GGNNCC 2 cut(s) 282, 1087
BmrFI CCNGG 6 cut(s) 278, 1203, 1421, 1723, 1828, 1968
BmrI ACTGGG 2 cut(s) 890, 1007
BmsI GCATC 4 cut(s) 915, 1205, 1637, 1706
BmuI ACTGGG 2 cut(s) 890, 1007
BpiI GAAGAC 1 cut(s) 1142
BpmI CTGGAG 3 cut(s) 746, 1608, 1810
Bpu10I CCTNAGC 3 cut(s) 402, 1167, 1539
Bpu1102I GCTNAGC 1 cut(s) 146
Bpu14I TTCGAA 1 cut(s) 1914
BpuEI CTTGAG 2 cut(s) 650, 836
BpuMI CCSGG 2 cut(s) 1421, 1723
BsaAI YACGTR 1 cut(s) 1240
BsaI GGTCTC 2 cut(s) 1444, 1844
BsaJI CCNNGG 4 cut(s) 589, 1202, 1455, 1967
Bsc4I CCNNNNNNNGG 4 cut(s) 1638, 1639, 1779, 1833
Bse1I ACTGG 5 cut(s) 896, 967, 1013, 1596, 1773
Bse21I CCTNAGG 1 cut(s) 1345
Bse3DI GCAATG 2 cut(s) 193, 837
BseBI CCWGG 4 cut(s) 278, 1203, 1828, 1968
BseDI CCNNGG 4 cut(s) 589, 1202, 1455, 1967
BseGI GGATG 7 cut(s) 374, 449, 631, 795, 909, 1416, 1628
BseLI CCNNNNNNNGG 4 cut(s) 1638, 1639, 1779, 1833
BseMI GCAATG 2 cut(s) 193, 837
BseNI ACTGG 5 cut(s) 896, 967, 1013, 1596, 1773
BseRI GAGGAG 2 cut(s) 279, 1319
BseSI GKGCMC 3 cut(s) 311, 446, 1582
BseXI GCAGC 4 cut(s) 71, 218, 355, 1516
BseYI CCCAGC 1 cut(s) 1637
BshFI GGCC 5 cut(s) 588, 703, 783, 1772, 1972
BshNI GGYRCC 1 cut(s) 1085
BsiHKAI GWGCWC 3 cut(s) 176, 446, 1582
BsiHKCI CYCGRG 2 cut(s) 389, 1454
BsiSI CCGG 2 cut(s) 1420, 1722
BsiWI CGTACG 1 cut(s) 596
BslI CCNNNNNNNGG 4 cut(s) 1638, 1639, 1779, 1833
BsmAI GTCTC 7 cut(s) 7, 816, 1228, 1444, 1808, 1828, 1844
BsmI GAATGC 2 cut(s) 198, 555
BsnI GGCC 5 cut(s) 588, 703, 783, 1772, 1972
Bso31I GGTCTC 2 cut(s) 1444, 1844
BsoBI CYCGRG 2 cut(s) 389, 1454
Bsp119I TTCGAA 1 cut(s) 1914
Bsp1286I GDGCHC 4 cut(s) 176, 311, 446, 1582
Bsp1407I TGTACA 1 cut(s) 1389
Bsp143I GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
Bsp1720I GCTNAGC 1 cut(s) 146
Bsp19I CCATGG 1 cut(s) 589
BspACI CCGC 4 cut(s) 114, 470, 1507, 1899
BspANI GGCC 5 cut(s) 588, 703, 783, 1772, 1972
BspLI GGNNCC 2 cut(s) 282, 1087
BspMAI CTGCAG 1 cut(s) 523
BspMI ACCTGC 3 cut(s) 812, 1903, 1930
BspPI GGATC 1 cut(s) 1040
BspT104I TTCGAA 1 cut(s) 1914
BspT107I GGYRCC 1 cut(s) 1085
BspTNI GGTCTC 2 cut(s) 1444, 1844
BsrDI GCAATG 2 cut(s) 193, 837
BsrGI TGTACA 1 cut(s) 1389
BsrI ACTGG 5 cut(s) 896, 967, 1013, 1596, 1773
BssECI CCNNGG 4 cut(s) 589, 1202, 1455, 1967
BssMI GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
BssNAI GTATAC 1 cut(s) 1356
BssT1I CCWWGG 1 cut(s) 589
Bst1107I GTATAC 1 cut(s) 1356
Bst2UI CCWGG 4 cut(s) 278, 1203, 1828, 1968
Bst4CI ACNGT 7 cut(s) 484, 619, 960, 1186, 1652, 1856, 1865
Bst6I CTCTTC 4 cut(s) 520, 742, 1296, 1826
BstAPI GCANNNNNTGC 2 cut(s) 827, 1907
BstAUI TGTACA 1 cut(s) 1389
BstBAI YACGTR 1 cut(s) 1240
BstBI TTCGAA 1 cut(s) 1914
BstC8I GCNNGC 4 cut(s) 176, 672, 1062, 1728
BstDSI CCRYGG 1 cut(s) 589
BstF5I GGATG 7 cut(s) 374, 449, 631, 795, 909, 1416, 1628
BstKTI GATC 5 cut(s) 880, 1048, 1075, 1399, 1501
BstMAI GTCTC 7 cut(s) 7, 816, 1228, 1444, 1808, 1828, 1844
BstMBI GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
BstMWI GCNNNNNNNGC 9 cut(s) 120, 129, 240, 800, 827, 1478, 1592, 1634, 1907
BstNI CCWGG 4 cut(s) 278, 1203, 1828, 1968
BstNSI RCATGY 3 cut(s) 1000, 1064, 1390
BstSCI CCNGG 6 cut(s) 276, 1201, 1419, 1721, 1826, 1966
BstSFI CTRYAG 3 cut(s) 519, 720, 1861
BstSLI GKGCMC 3 cut(s) 311, 446, 1582
BstV1I GCAGC 4 cut(s) 71, 218, 355, 1516
BstV2I GAAGAC 1 cut(s) 1142
BstX2I RGATCY 1 cut(s) 1396
BstXI CCANNNNNNTGG 2 cut(s) 354, 1025
BstYI RGATCY 1 cut(s) 1396
BstZ17I GTATAC 1 cut(s) 1356
Bsu36I CCTNAGG 1 cut(s) 1345
BsuRI GGCC 5 cut(s) 588, 703, 783, 1772, 1972
BtgI CCRYGG 1 cut(s) 589
BtgZI GCGATG 1 cut(s) 1182
BtsCI GGATG 7 cut(s) 374, 449, 631, 795, 909, 1416, 1628
BtsI GCAGTG 2 cut(s) 162, 1488
BtsIMutI CAGTG 5 cut(s) 162, 637, 1162, 1488, 1780
BveI ACCTGC 3 cut(s) 812, 1903, 1930
Cac8I GCNNGC 4 cut(s) 176, 672, 1062, 1728
Cfr13I GGNCC 6 cut(s) 586, 701, 868, 1349, 1770, 1970
Csp6I GTAC 8 cut(s) 269, 370, 394, 597, 1086, 1294, 1390, 1857
CspCI CAANNNNNGTGG 4 cut(s) 176, 211, 233, 268
CviQI GTAC 8 cut(s) 269, 370, 394, 597, 1086, 1294, 1390, 1857
DpnI GATC 5 cut(s) 879, 1047, 1074, 1398, 1500
DpnII GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
EaeI YGGCCR 1 cut(s) 781
Eam1104I CTCTTC 4 cut(s) 520, 742, 1296, 1826
EarI CTCTTC 4 cut(s) 520, 742, 1296, 1826
Eco130I CCWWGG 1 cut(s) 589
Eco31I GGTCTC 2 cut(s) 1444, 1844
Eco47I GGWCC 2 cut(s) 868, 1349
Eco57I CTGAAG 4 cut(s) 557, 864, 1548, 1857
Eco72I CACGTG 1 cut(s) 1240
Eco81I CCTNAGG 1 cut(s) 1345
Eco88I CYCGRG 2 cut(s) 389, 1454
EcoO109I RGGNCCY 2 cut(s) 701, 868
EcoRII CCWGG 4 cut(s) 276, 1201, 1826, 1966
EcoT14I CCWWGG 1 cut(s) 589
EcoT22I ATGCAT 2 cut(s) 1062, 1388
ErhI CCWWGG 1 cut(s) 589
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FauI CCCGC 1 cut(s) 477
FblI GTMKAC 2 cut(s) 1323, 1355
Fnu4HI GCNGC 5 cut(s) 85, 232, 344, 1505, 1899
FokI GGATG 7 cut(s) 361, 436, 638, 782, 896, 1403, 1615
Fsp4HI GCNGC 5 cut(s) 85, 232, 344, 1505, 1899
FspBI CTAG 4 cut(s) 800, 990, 1400, 1779
GluI GCNGC 5 cut(s) 85, 232, 344, 1505, 1899
GsaI CCCAGC 1 cut(s) 1641
GsuI CTGGAG 3 cut(s) 746, 1608, 1810
HaeIII GGCC 5 cut(s) 588, 703, 783, 1772, 1972
HapII CCGG 2 cut(s) 1420, 1722
HincII GTYRAC 2 cut(s) 1265, 1889
HindII GTYRAC 2 cut(s) 1265, 1889
HindIII AAGCTT 1 cut(s) 653
HpaII CCGG 2 cut(s) 1420, 1722
HphI GGTGA 4 cut(s) 1219, 1442, 1796, 1889
Hpy166II GTNNAC 8 cut(s) 444, 1018, 1265, 1279, 1324, 1356, 1580, 1889
Hpy188I TCNGA 8 cut(s) 294, 421, 583, 709, 922, 1072, 1255, 1934
Hpy188III TCNNGA 9 cut(s) 77, 401, 487, 575, 623, 763, 853, 1169, 1337
Hpy8I GTNNAC 8 cut(s) 444, 1018, 1265, 1279, 1324, 1356, 1580, 1889
HpyAV CCTTC 6 cut(s) 424, 581, 638, 714, 839, 876
HpyCH4III ACNGT 7 cut(s) 484, 619, 960, 1186, 1652, 1856, 1865
HpyCH4IV ACGT 3 cut(s) 180, 1239, 1281
HpyF10VI GCNNNNNNNGC 9 cut(s) 120, 129, 240, 800, 827, 1478, 1592, 1634, 1907
HpySE526I ACGT 3 cut(s) 180, 1239, 1281
KpnI GGTACC 1 cut(s) 1089
Kzo9I GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
Lsp1109I GCAGC 4 cut(s) 71, 218, 355, 1516
LweI GCATC 4 cut(s) 915, 1205, 1637, 1706
MaeI CTAG 4 cut(s) 800, 990, 1400, 1779
MaeII ACGT 3 cut(s) 180, 1239, 1281
MaeIII GTNAC 3 cut(s) 613, 676, 1784
MalI GATC 5 cut(s) 879, 1047, 1074, 1398, 1500
MboI GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
MboII GAAGA 8 cut(s) 151, 507, 759, 887, 1142, 1222, 1313, 1843
MfeI CAATTG 1 cut(s) 109
MflI RGATCY 1 cut(s) 1396
MhlI GDGCHC 4 cut(s) 176, 311, 446, 1582
MlsI TGGCCA 1 cut(s) 783
MluNI TGGCCA 1 cut(s) 783
MlyI GAGTC 6 cut(s) 484, 509, 759, 818, 843, 1118
MmeI TCCRAC 2 cut(s) 1090, 1264
Mox20I TGGCCA 1 cut(s) 783
Mph1103I ATGCAT 2 cut(s) 1062, 1388
MroXI GAANNNNTTC 1 cut(s) 1750
MscI TGGCCA 1 cut(s) 783
MseI TTAA 4 cut(s) 66, 105, 864, 1616
MslI CAYNNNNRTG 3 cut(s) 789, 1242, 1421
Msp20I TGGCCA 1 cut(s) 783
MspA1I CMGCKG 1 cut(s) 1507
MspI CCGG 2 cut(s) 1420, 1722
MspR9I CCNGG 6 cut(s) 278, 1203, 1421, 1723, 1828, 1968
MunI CAATTG 1 cut(s) 109
Mva1269I GAATGC 2 cut(s) 198, 555
MvaI CCWGG 4 cut(s) 278, 1203, 1828, 1968
MwoI GCNNNNNNNGC 9 cut(s) 120, 129, 240, 800, 827, 1478, 1592, 1634, 1907
NciI CCSGG 2 cut(s) 1421, 1723
NcoI CCATGG 1 cut(s) 589
NdeII GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
NlaIV GGNNCC 2 cut(s) 282, 1087
NmuCI GTSAC 3 cut(s) 613, 676, 1784
NsiI ATGCAT 2 cut(s) 1062, 1388
NspI RCATGY 3 cut(s) 1000, 1064, 1390
NspV TTCGAA 1 cut(s) 1914
PaeI GCATGC 1 cut(s) 1064
PaqCI CACCTGC 3 cut(s) 812, 1903, 1930
PctI GAATGC 2 cut(s) 198, 555
PdmI GAANNNNTTC 1 cut(s) 1750
PfeI GAWTC 7 cut(s) 524, 578, 977, 982, 1103, 1340, 1746
Pfl23II CGTACG 1 cut(s) 596
PfoI TCCNGGA 1 cut(s) 1826
PkrI GCNGC 5 cut(s) 86, 233, 345, 1506, 1900
PleI GAGTC 6 cut(s) 484, 508, 758, 817, 843, 1118
PmaCI CACGTG 1 cut(s) 1240
PmlI CACGTG 1 cut(s) 1240
PpsI GAGTC 6 cut(s) 484, 508, 758, 817, 843, 1118
Ppu21I YACGTR 1 cut(s) 1240
PpuMI RGGWCCY 1 cut(s) 868
Psp5II RGGWCCY 1 cut(s) 868
Psp6I CCWGG 4 cut(s) 276, 1201, 1826, 1966
PspCI CACGTG 1 cut(s) 1240
PspFI CCCAGC 1 cut(s) 1637
PspGI CCWGG 4 cut(s) 276, 1201, 1826, 1966
PspLI CGTACG 1 cut(s) 596
PspN4I GGNNCC 2 cut(s) 282, 1087
PspPI GGNCC 6 cut(s) 586, 701, 868, 1349, 1770, 1970
PspPPI RGGWCCY 1 cut(s) 868
PstI CTGCAG 1 cut(s) 523
PsuI RGATCY 1 cut(s) 1396
RsaI GTAC 8 cut(s) 270, 371, 395, 598, 1087, 1295, 1391, 1858
RsaNI GTAC 8 cut(s) 269, 370, 394, 597, 1086, 1294, 1390, 1857
RseI CAYNNNNRTG 3 cut(s) 789, 1242, 1421
SaqAI TTAA 4 cut(s) 66, 105, 864, 1616
SatI GCNGC 5 cut(s) 85, 232, 344, 1505, 1899
Sau3AI GATC 5 cut(s) 877, 1045, 1072, 1396, 1498
Sau96I GGNCC 6 cut(s) 586, 701, 868, 1349, 1770, 1970
ScaI AGTACT 1 cut(s) 371
SchI GAGTC 6 cut(s) 484, 509, 759, 818, 843, 1118
ScrFI CCNGG 6 cut(s) 278, 1203, 1421, 1723, 1828, 1968
SduI GDGCHC 4 cut(s) 176, 311, 446, 1582
SfaNI GCATC 4 cut(s) 915, 1205, 1637, 1706
SfcI CTRYAG 3 cut(s) 519, 720, 1861
SfuI TTCGAA 1 cut(s) 1914
SinI GGWCC 2 cut(s) 868, 1349
SmiMI CAYNNNNRTG 3 cut(s) 789, 1242, 1421
SmlI CTYRAG 2 cut(s) 665, 851
SmoI CTYRAG 2 cut(s) 665, 851
SphI GCATGC 1 cut(s) 1064
SsiI CCGC 4 cut(s) 114, 470, 1507, 1899
SspI AATATT 1 cut(s) 1570
SspMI CTAG 4 cut(s) 800, 990, 1400, 1779
StyD4I CCNGG 6 cut(s) 276, 1201, 1419, 1721, 1826, 1966
StyI CCWWGG 1 cut(s) 589
TaaI ACNGT 7 cut(s) 484, 619, 960, 1186, 1652, 1856, 1865
TaiI ACGT 3 cut(s) 183, 1242, 1284
TaqI TCGA 4 cut(s) 880, 943, 980, 1914
TatI WGTACW 2 cut(s) 369, 1389
TauI GCSGC 1 cut(s) 1901
TfiI GAWTC 7 cut(s) 524, 578, 977, 982, 1103, 1340, 1746
Tru1I TTAA 4 cut(s) 66, 105, 864, 1616
Tru9I TTAA 4 cut(s) 66, 105, 864, 1616
TscAI CASTG 5 cut(s) 169, 637, 1162, 1488, 1780
TseFI GTSAC 3 cut(s) 613, 676, 1784
TseI GCWGC 4 cut(s) 84, 231, 343, 1504
Tsp45I GTSAC 3 cut(s) 613, 676, 1784
TspDTI ATGAA 6 cut(s) 441, 801, 1020, 1087, 1425, 1718
TspGWI ACGGA 4 cut(s) 512, 1341, 1615, 1832
TspRI CASTG 5 cut(s) 169, 637, 1162, 1488, 1780
VneI GTGCAC 2 cut(s) 442, 1578
VpaK11BI GGWCC 2 cut(s) 868, 1349
XapI RAATTY 4 cut(s) 117, 535, 1515, 1608
XceI RCATGY 3 cut(s) 1000, 1064, 1390
XcmI CCANNNNNNNNNTGG 1 cut(s) 17
XmiI GTMKAC 2 cut(s) 1323, 1355
XmnI GAANNNNTTC 1 cut(s) 1750
XspI CTAG 4 cut(s) 800, 990, 1400, 1779
ZrmI AGTACT 1 cut(s) 371
Zsp2I ATGCAT 2 cut(s) 1062, 1388
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.