VWA / Hh protein intein-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1247 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 442 |
| AciI | CCGC | 2 cut(s) | 186, 1387 |
| AcoI | YGGCCR | 1 cut(s) | 898 |
| AcuI | CTGAAG | 3 cut(s) | 620, 1109, 1200 |
| AcyI | GRCGYC | 1 cut(s) | 1244 |
| AfaI | GTAC | 6 cut(s) | 285, 342, 661, 1175, 1205, 1271 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 442 |
| AflII | CTTAAG | 1 cut(s) | 548 |
| AflIII | ACRYGT | 1 cut(s) | 1117 |
| AgsI | TTSAA | 7 cut(s) | 25, 141, 455, 521, 848, 937, 1287 |
| AjnI | CCWGG | 1 cut(s) | 1081 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1382, 1414 |
| AluBI | AGCT | 9 cut(s) | 227, 239, 418, 710, 729, 1229, 1283, 1294, 1352 |
| AluI | AGCT | 9 cut(s) | 227, 239, 418, 710, 729, 1229, 1283, 1294, 1352 |
| Alw21I | GWGCWC | 2 cut(s) | 628, 993 |
| Alw26I | GTCTC | 2 cut(s) | 746, 1324 |
| Alw44I | GTGCAC | 2 cut(s) | 624, 989 |
| Ama87I | CYCGRG | 1 cut(s) | 376 |
| AoxI | GGCC | 3 cut(s) | 428, 649, 898 |
| ApaLI | GTGCAC | 2 cut(s) | 624, 989 |
| ApeKI | GCWGC | 4 cut(s) | 412, 415, 581, 1384 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1323, 1355 |
| AspLEI | GCGC | 1 cut(s) | 1460 |
| AspS9I | GGNCC | 2 cut(s) | 105, 649 |
| AsuHPI | GGTGA | 2 cut(s) | 499, 504 |
| AsuNHI | GCTAGC | 1 cut(s) | 875 |
| AvaI | CYCGRG | 1 cut(s) | 376 |
| AvaII | GGWCC | 1 cut(s) | 105 |
| AxyI | CCTNAGG | 1 cut(s) | 1335 |
| BaeGI | GKGCMC | 2 cut(s) | 628, 993 |
| BalI | TGGCCA | 1 cut(s) | 900 |
| BbsI | GAAGAC | 1 cut(s) | 1120 |
| Bbv12I | GWGCWC | 2 cut(s) | 628, 993 |
| BbvCI | CCTCAGC | 1 cut(s) | 1225 |
| BbvI | GCAGC | 4 cut(s) | 424, 427, 568, 1396 |
| BccI | CCATC | 6 cut(s) | 415, 508, 764, 791, 890, 1435 |
| BciT130I | CCWGG | 1 cut(s) | 1083 |
| BciVI | GTATCC | 1 cut(s) | 395 |
| BcoDI | GTCTC | 2 cut(s) | 746, 1324 |
| BfaI | CTAG | 5 cut(s) | 611, 876, 963, 1280, 1349 |
| BfmI | CTRYAG | 2 cut(s) | 582, 1451 |
| BfrI | CTTAAG | 1 cut(s) | 548 |
| BfuI | GTATCC | 1 cut(s) | 395 |
| BglII | AGATCT | 1 cut(s) | 1276 |
| BisI | GCNGC | 5 cut(s) | 187, 413, 416, 582, 1385 |
| BlpI | GCTNAGC | 1 cut(s) | 218 |
| BlsI | GCNGC | 5 cut(s) | 188, 414, 417, 583, 1386 |
| Bme1390I | CCNGG | 1 cut(s) | 1083 |
| Bme18I | GGWCC | 1 cut(s) | 105 |
| BmeT110I | CYCGRG | 1 cut(s) | 376 |
| BmgT120I | GGNCC | 2 cut(s) | 105, 649 |
| BmiI | GGNNCC | 1 cut(s) | 1215 |
| BmrFI | CCNGG | 1 cut(s) | 1083 |
| BmrI | ACTGGG | 2 cut(s) | 863, 980 |
| BmsI | GCATC | 6 cut(s) | 888, 1009, 1036, 1058, 1085, 1287 |
| BmtI | GCTAGC | 1 cut(s) | 879 |
| BmuI | ACTGGG | 2 cut(s) | 863, 980 |
| BpiI | GAAGAC | 1 cut(s) | 1120 |
| BpmI | CTGGAG | 1 cut(s) | 809 |
| Bpu10I | CCTNAGC | 2 cut(s) | 465, 1225 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 218 |
| BpuEI | CTTGAG | 1 cut(s) | 705 |
| BsaAI | YACGTR | 1 cut(s) | 1269 |
| BsaHI | GRCGYC | 1 cut(s) | 1244 |
| BsaI | GGTCTC | 1 cut(s) | 1324 |
| BsaJI | CCNNGG | 3 cut(s) | 441, 652, 1082 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 442 |
| Bse1I | ACTGG | 2 cut(s) | 869, 986 |
| Bse21I | CCTNAGG | 1 cut(s) | 1335 |
| Bse3DI | GCAATG | 2 cut(s) | 810, 1313 |
| BseBI | CCWGG | 1 cut(s) | 1083 |
| BseDI | CCNNGG | 3 cut(s) | 441, 652, 1082 |
| BseGI | GGATG | 5 cut(s) | 129, 500, 694, 839, 882 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 442 |
| BseMI | GCAATG | 2 cut(s) | 810, 1313 |
| BseMII | CTCAG | 7 cut(s) | 231, 456, 636, 1239, 1319, 1326, 1428 |
| BseNI | ACTGG | 2 cut(s) | 869, 986 |
| BseRI | GAGGAG | 2 cut(s) | 381, 1199 |
| BseSI | GKGCMC | 2 cut(s) | 628, 993 |
| BseXI | GCAGC | 4 cut(s) | 424, 427, 568, 1396 |
| BshFI | GGCC | 3 cut(s) | 430, 651, 900 |
| BsiHKAI | GWGCWC | 2 cut(s) | 628, 993 |
| BsiHKCI | CYCGRG | 1 cut(s) | 376 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 442 |
| BsmAI | GTCTC | 2 cut(s) | 746, 1324 |
| BsmI | GAATGC | 1 cut(s) | 35 |
| BsnI | GGCC | 3 cut(s) | 430, 651, 900 |
| Bso31I | GGTCTC | 1 cut(s) | 1324 |
| BsoBI | CYCGRG | 1 cut(s) | 376 |
| Bsp1286I | GDGCHC | 2 cut(s) | 628, 993 |
| Bsp1407I | TGTACA | 1 cut(s) | 283 |
| Bsp143I | GATC | 3 cut(s) | 850, 1276, 1378 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 218 |
| Bsp19I | CCATGG | 2 cut(s) | 441, 652 |
| BspACI | CCGC | 2 cut(s) | 186, 1387 |
| BspANI | GGCC | 3 cut(s) | 430, 651, 900 |
| BspCNI | CTCAG | 7 cut(s) | 232, 457, 637, 1238, 1320, 1327, 1429 |
| BspLI | GGNNCC | 1 cut(s) | 1215 |
| BspMAI | CTGCAG | 2 cut(s) | 586, 1455 |
| BspOI | GCTAGC | 1 cut(s) | 879 |
| BspTI | CTTAAG | 1 cut(s) | 548 |
| BspTNI | GGTCTC | 1 cut(s) | 1324 |
| BsrDI | GCAATG | 2 cut(s) | 810, 1313 |
| BsrGI | TGTACA | 1 cut(s) | 283 |
| BsrI | ACTGG | 2 cut(s) | 869, 986 |
| BssECI | CCNNGG | 3 cut(s) | 441, 652, 1082 |
| BssMI | GATC | 3 cut(s) | 850, 1276, 1378 |
| BssNI | GRCGYC | 1 cut(s) | 1244 |
| BssT1I | CCWWGG | 2 cut(s) | 441, 652 |
| Bst2UI | CCWGG | 1 cut(s) | 1083 |
| Bst4CI | ACNGT | 5 cut(s) | 266, 682, 933, 1066, 1107 |
| Bst6I | CTCTTC | 2 cut(s) | 532, 1176 |
| BstACI | GRCGYC | 1 cut(s) | 1244 |
| BstAFI | CTTAAG | 1 cut(s) | 548 |
| BstAUI | TGTACA | 1 cut(s) | 283 |
| BstBAI | YACGTR | 1 cut(s) | 1269 |
| BstC8I | GCNNGC | 3 cut(s) | 727, 877, 1035 |
| BstDSI | CCRYGG | 2 cut(s) | 441, 652 |
| BstF5I | GGATG | 5 cut(s) | 129, 500, 694, 839, 882 |
| BstHHI | GCGC | 1 cut(s) | 1460 |
| BstKTI | GATC | 3 cut(s) | 853, 1279, 1381 |
| BstMAI | GTCTC | 2 cut(s) | 746, 1324 |
| BstMBI | GATC | 3 cut(s) | 850, 1276, 1378 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 192, 201, 312, 578, 791, 1358, 1472 |
| BstNI | CCWGG | 1 cut(s) | 1083 |
| BstNSI | RCATGY | 2 cut(s) | 1037, 1121 |
| BstSCI | CCNGG | 1 cut(s) | 1081 |
| BstSFI | CTRYAG | 2 cut(s) | 582, 1451 |
| BstSLI | GKGCMC | 2 cut(s) | 628, 993 |
| BstV1I | GCAGC | 4 cut(s) | 424, 427, 568, 1396 |
| BstV2I | GAAGAC | 1 cut(s) | 1120 |
| BstX2I | RGATCY | 1 cut(s) | 1276 |
| BstYI | RGATCY | 1 cut(s) | 1276 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1335 |
| BsuI | GTATCC | 1 cut(s) | 395 |
| BsuRI | GGCC | 3 cut(s) | 430, 651, 900 |
| BtgI | CCRYGG | 2 cut(s) | 441, 652 |
| BtgZI | GCGATG | 2 cut(s) | 393, 1062 |
| BtsCI | GGATG | 5 cut(s) | 129, 500, 694, 839, 882 |
| BtsI | GCAGTG | 2 cut(s) | 301, 1368 |
| BtsIMutI | CAGTG | 4 cut(s) | 301, 700, 993, 1368 |
| Cac8I | GCNNGC | 3 cut(s) | 727, 877, 1035 |
| CfoI | GCGC | 1 cut(s) | 1460 |
| Cfr13I | GGNCC | 2 cut(s) | 105, 649 |
| Csp6I | GTAC | 6 cut(s) | 284, 341, 660, 1174, 1204, 1270 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 361, 396 |
| CviQI | GTAC | 6 cut(s) | 284, 341, 660, 1174, 1204, 1270 |
| DpnI | GATC | 3 cut(s) | 852, 1278, 1380 |
| DpnII | GATC | 3 cut(s) | 850, 1276, 1378 |
| EaeI | YGGCCR | 1 cut(s) | 898 |
| Eam1104I | CTCTTC | 2 cut(s) | 532, 1176 |
| EarI | CTCTTC | 2 cut(s) | 532, 1176 |
| Eco130I | CCWWGG | 2 cut(s) | 441, 652 |
| Eco31I | GGTCTC | 1 cut(s) | 1324 |
| Eco47I | GGWCC | 1 cut(s) | 105 |
| Eco57I | CTGAAG | 3 cut(s) | 620, 1109, 1200 |
| Eco81I | CCTNAGG | 1 cut(s) | 1335 |
| Eco88I | CYCGRG | 1 cut(s) | 376 |
| EcoRII | CCWGG | 1 cut(s) | 1081 |
| EcoT14I | CCWWGG | 2 cut(s) | 441, 652 |
| EcoT22I | ATGCAT | 2 cut(s) | 1035, 1051 |
| ErhI | CCWWGG | 2 cut(s) | 441, 652 |
| Fnu4HI | GCNGC | 5 cut(s) | 187, 413, 416, 582, 1385 |
| FokI | GGATG | 5 cut(s) | 136, 487, 701, 846, 869 |
| Fsp4HI | GCNGC | 5 cut(s) | 187, 413, 416, 582, 1385 |
| FspBI | CTAG | 5 cut(s) | 611, 876, 963, 1280, 1349 |
| GlaI | GCGC | 1 cut(s) | 1459 |
| GluI | GCNGC | 5 cut(s) | 187, 413, 416, 582, 1385 |
| GsuI | CTGGAG | 1 cut(s) | 809 |
| HaeIII | GGCC | 3 cut(s) | 430, 651, 900 |
| HhaI | GCGC | 1 cut(s) | 1460 |
| Hin1I | GRCGYC | 1 cut(s) | 1244 |
| Hin6I | GCGC | 1 cut(s) | 1458 |
| HinP1I | GCGC | 1 cut(s) | 1458 |
| HincII | GTYRAC | 2 cut(s) | 30, 277 |
| HindII | GTYRAC | 2 cut(s) | 30, 277 |
| HindIII | AAGCTT | 1 cut(s) | 708 |
| HinfI | GANTC | 9 cut(s) | 553, 563, 587, 618, 641, 822, 840, 950, 1409 |
| HphI | GGTGA | 2 cut(s) | 499, 504 |
| Hpy166II | GTNNAC | 6 cut(s) | 30, 277, 626, 662, 991, 1204 |
| Hpy188I | TCNGA | 5 cut(s) | 484, 617, 646, 895, 1135 |
| Hpy188III | TCNNGA | 6 cut(s) | 464, 638, 686, 776, 826, 1110 |
| Hpy8I | GTNNAC | 6 cut(s) | 30, 277, 626, 662, 991, 1204 |
| HpyAV | CCTTC | 7 cut(s) | 70, 487, 514, 644, 693, 812, 849 |
| HpyCH4III | ACNGT | 5 cut(s) | 266, 682, 933, 1066, 1107 |
| HpyCH4IV | ACGT | 2 cut(s) | 1244, 1268 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 192, 201, 312, 578, 791, 1358, 1472 |
| HpySE526I | ACGT | 2 cut(s) | 1244, 1268 |
| Hsp92I | GRCGYC | 1 cut(s) | 1244 |
| HspAI | GCGC | 1 cut(s) | 1458 |
| Kzo9I | GATC | 3 cut(s) | 850, 1276, 1378 |
| LmnI | GCTCC | 1 cut(s) | 1234 |
| Lsp1109I | GCAGC | 4 cut(s) | 424, 427, 568, 1396 |
| LweI | GCATC | 6 cut(s) | 888, 1009, 1036, 1058, 1085, 1287 |
| MaeI | CTAG | 5 cut(s) | 611, 876, 963, 1280, 1349 |
| MaeII | ACGT | 2 cut(s) | 1244, 1268 |
| MaeIII | GTNAC | 2 cut(s) | 676, 762 |
| MalI | GATC | 3 cut(s) | 852, 1278, 1380 |
| MboI | GATC | 3 cut(s) | 850, 1276, 1378 |
| MboII | GAAGA | 9 cut(s) | 88, 125, 223, 290, 519, 860, 1102, 1125, 1193 |
| MfeI | CAATTG | 1 cut(s) | 941 |
| MflI | RGATCY | 1 cut(s) | 1276 |
| MhlI | GDGCHC | 2 cut(s) | 628, 993 |
| MlsI | TGGCCA | 1 cut(s) | 900 |
| MluCI | AATT | 4 cut(s) | 181, 597, 941, 1193 |
| MluNI | TGGCCA | 1 cut(s) | 900 |
| MlyI | GAGTC | 4 cut(s) | 547, 572, 816, 849 |
| Mox20I | TGGCCA | 1 cut(s) | 900 |
| Mph1103I | ATGCAT | 2 cut(s) | 1035, 1051 |
| MscI | TGGCCA | 1 cut(s) | 900 |
| MseI | TTAA | 2 cut(s) | 549, 1477 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1122 |
| Msp20I | TGGCCA | 1 cut(s) | 900 |
| MspA1I | CMGCKG | 2 cut(s) | 239, 1387 |
| MspCI | CTTAAG | 1 cut(s) | 548 |
| MspR9I | CCNGG | 1 cut(s) | 1083 |
| MunI | CAATTG | 1 cut(s) | 941 |
| Mva1269I | GAATGC | 1 cut(s) | 35 |
| MvaI | CCWGG | 1 cut(s) | 1083 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 192, 201, 312, 578, 791, 1358, 1472 |
| NcoI | CCATGG | 2 cut(s) | 441, 652 |
| NdeII | GATC | 3 cut(s) | 850, 1276, 1378 |
| NheI | GCTAGC | 1 cut(s) | 875 |
| NlaIV | GGNNCC | 1 cut(s) | 1215 |
| NmeAIII | GCCGAG | 1 cut(s) | 341 |
| NmuCI | GTSAC | 2 cut(s) | 676, 762 |
| NsiI | ATGCAT | 2 cut(s) | 1035, 1051 |
| NspI | RCATGY | 2 cut(s) | 1037, 1121 |
| PaeI | GCATGC | 1 cut(s) | 1037 |
| PciI | ACATGT | 1 cut(s) | 1117 |
| PctI | GAATGC | 1 cut(s) | 35 |
| PfeI | GAWTC | 5 cut(s) | 587, 618, 641, 950, 1409 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 442 |
| PkrI | GCNGC | 5 cut(s) | 188, 414, 417, 583, 1386 |
| PleI | GAGTC | 4 cut(s) | 547, 571, 816, 848 |
| PpsI | GAGTC | 4 cut(s) | 547, 571, 816, 848 |
| Ppu21I | YACGTR | 1 cut(s) | 1269 |
| PscI | ACATGT | 1 cut(s) | 1117 |
| Psp6I | CCWGG | 1 cut(s) | 1081 |
| PspGI | CCWGG | 1 cut(s) | 1081 |
| PspN4I | GGNNCC | 1 cut(s) | 1215 |
| PspPI | GGNCC | 2 cut(s) | 105, 649 |
| PstI | CTGCAG | 2 cut(s) | 586, 1455 |
| PsuI | RGATCY | 1 cut(s) | 1276 |
| PvuII | CAGCTG | 1 cut(s) | 239 |
| RsaI | GTAC | 6 cut(s) | 285, 342, 661, 1175, 1205, 1271 |
| RsaNI | GTAC | 6 cut(s) | 284, 341, 660, 1174, 1204, 1270 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1122 |
| SaqAI | TTAA | 2 cut(s) | 549, 1477 |
| SatI | GCNGC | 5 cut(s) | 187, 413, 416, 582, 1385 |
| Sau3AI | GATC | 3 cut(s) | 850, 1276, 1378 |
| Sau96I | GGNCC | 2 cut(s) | 105, 649 |
| SchI | GAGTC | 4 cut(s) | 547, 572, 816, 849 |
| ScrFI | CCNGG | 1 cut(s) | 1083 |
| SduI | GDGCHC | 2 cut(s) | 628, 993 |
| SfaNI | GCATC | 6 cut(s) | 888, 1009, 1036, 1058, 1085, 1287 |
| SfcI | CTRYAG | 2 cut(s) | 582, 1451 |
| SinI | GGWCC | 1 cut(s) | 105 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1122 |
| SmlI | CTYRAG | 2 cut(s) | 548, 720 |
| SmoI | CTYRAG | 2 cut(s) | 548, 720 |
| SphI | GCATGC | 1 cut(s) | 1037 |
| Sse9I | AATT | 4 cut(s) | 181, 597, 941, 1193 |
| SsiI | CCGC | 2 cut(s) | 186, 1387 |
| SspMI | CTAG | 5 cut(s) | 611, 876, 963, 1280, 1349 |
| StyD4I | CCNGG | 1 cut(s) | 1081 |
| StyI | CCWWGG | 2 cut(s) | 441, 652 |
| TaaI | ACNGT | 5 cut(s) | 266, 682, 933, 1066, 1107 |
| TaiI | ACGT | 2 cut(s) | 1247, 1271 |
| TaqI | TCGA | 2 cut(s) | 838, 853 |
| TasI | AATT | 4 cut(s) | 181, 597, 941, 1193 |
| TatI | WGTACW | 1 cut(s) | 283 |
| TauI | GCSGC | 1 cut(s) | 189 |
| TfiI | GAWTC | 5 cut(s) | 587, 618, 641, 950, 1409 |
| Tru1I | TTAA | 2 cut(s) | 549, 1477 |
| Tru9I | TTAA | 2 cut(s) | 549, 1477 |
| TscAI | CASTG | 4 cut(s) | 308, 700, 993, 1368 |
| TseFI | GTSAC | 2 cut(s) | 676, 762 |
| TseI | GCWGC | 4 cut(s) | 412, 415, 581, 1384 |
| Tsp45I | GTSAC | 2 cut(s) | 676, 762 |
| TspDTI | ATGAA | 6 cut(s) | 125, 167, 504, 986, 993, 1148 |
| TspRI | CASTG | 4 cut(s) | 308, 700, 993, 1368 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 442 |
| Vha464I | CTTAAG | 1 cut(s) | 548 |
| VneI | GTGCAC | 2 cut(s) | 624, 989 |
| VpaK11BI | GGWCC | 1 cut(s) | 105 |
| XceI | RCATGY | 2 cut(s) | 1037, 1121 |
| XspI | CTAG | 5 cut(s) | 611, 876, 963, 1280, 1349 |
| ZraI | GACGTC | 1 cut(s) | 1245 |
| Zsp2I | ATGCAT | 2 cut(s) | 1035, 1051 |