RchiOBHm_Chr5g0019151

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000360
Physical Location & Seq
Forward (+)
13592610 .. 13595361
2752 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29928

Sequence Viewer

Length: 2199 bp
ATGTCTCTTTCGGTTTACATGTGTATAGATGAGAATTCCCAATCGGTTGATTATTATATTTTACGTTCTTATTTTAATGGGAGATTATTTCTATGGGAAATGATCATATCTTGGGGGTTAAGGAAACCCAAAGGCTACCTGGTGCATGGTCTCTTATATAAAGGCTCATTTCTTCAAAGAATTGGTACAATACACTTTGAGGCTGAAGGTTTCTTTGTTCTGAAAATTTTAGCTGATAATCAATCACATAGTCCTTGTTCTCTCTTCTGGTGTTTGGTGTTTGAAGACTTGTTTGATCACTCATTCACTCCAAACATGAATTCGTCTGAGGCTGCATCTGATCAAAACAATTGTGGCATTTGCAGTAGTAGCCTGACAACAGAGCAAGGCCAAGCCATCTTCACTGCTGAGTGCTCACACTGTTTCCACTACCCTTGTATAGCCAACAATGTCCAGCATGGAAATCTTTACTGCCCCATCTGCCGAGCAAAGTGGAATAAGGATAATGTGCCTTTCCAAGTTTCTCCTCCACAAAACAATAACTCAGCTGCGATCCCTCCTCACATCCCATTCCCATCGCAGCAGCAAACCCGTTGGTATCAGTACCCATCCATGCAGGAACCCGAGTACCCTCCTGAGCCACCTACCTTCTCTGACGATGAACCTCTCCAATCGTCAACCTCACCTATTCAATCCCTTGTCCCCCGGAAAATAACACTTAAGACTCATACAGAGTCCTCTGCTATCTCTGCGGCAGAATCAAGCCCAAATTTTCCTGTCCTTGTCAGTATTCGTGCACCACACCTTAATGATTCTGAAGGCCATGGTCGTACGCCCATTGACCTCGTAACAGTTTTAGACGTAAGTGGCAGCATGCGAGGCACAAAGATTTCCCTTCTCAAGCAAGCTGTCACATTTGTCATAGAAAACTTGGGGCCTTCGGATAGACTTTCTATTGTTTCGTTCTCATCAAGTTCTAGAAGAGTCTTTCCTCTCCAGAGAATGTCCGTTGATGGTCGTGAAAGTGCCATCCTAGCCATTGAGTCTCTTAGAGCAGGTGGTGCAACTAACATTGCAGAAGGACTGAAGAAAGGAACTAAGGTCCTTGAAGATCGAAGGGAAAGAAACCCAGTTTCCAGCATCATCCTCTTATCTGATGGCAAAGATACATACAATACAACTGCAAACCGACTGTTGAACCAGTTGCCTGATTCGATTCGTTCTAGCAACACGCAACAGGAAACCCCAGTCCACACATTTGGATTTGGCTACGATCATGATCCCAGCATTATGCATGCTATATCTGATGTGTCAGGTGGCACCTTTTCGTTCATTGAATCAGTTGAAATGATACAAGACTCCTTTGCTCTGTGTATTGGGGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGTAAGGTCAGCATCACCTGGGGTGAAGATTTTAGCAATACCATCAGGGAGACATGTGAATGAGATTTCTACTGAGGGTCAGCAAGGTGTTGTTCATGTTGGAAATATGTATGCTGAAGAGGAAAAACAATTTCTGGTCTACCTAACAGTTCCAGAATCGTCAGCTCCGCAGGCGCATACTAAGACGTCATTGTTAGAGGTGTTATGCATGTACAAATATCTAGCTTCAAATGAGTTGATGGAGGTGCAAGGTGAGAAAATAGAGATACTGAGGCCTGAGGTTTGTTCCCCTGCTGAAAAGACAGTTTCTTTGGAGGTTGATCGGCAGCGGAACAGAATATTGGTGGCTGAAGCTATAGCTGAGGCACAAAGGTTGGCTGAGATTGGAAATCTGGAGGGTGCACAGGCTCTTTTGGCTCAACGGAAAGAAATTCTCTCAACATCAACAGCAGCCCAAGCAGGGGATTTTCACAGTAATTTGTTTGAAACTGAGCTTAGAGAAATGATGGATAGAATGGCAAGTATGAAGTTGTATAAACGAACCGGGCGTGCTTACGCTCTCTCAGGACTCAGTTCCCATAAGTTGCAAAGGGCCACAGCTAGGAAGTGTCGCAGGGTTTCCCATAGTGGGGGCTTTGAAGGTCGCAAGGCTTCCGGTGCTTCATCAGGTGCTACTCCAGGTGAATCGCCTGCCGCCGTTGGTGCTTTTGAAACACCTGCTATGGTCAGAATGGTAGAAAAATCACAGAAGAGGAATCAACCTGCGCCAGACCAAGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

732

Amino Acids

80.65

Weight (kDa)

6.23

Isoelectric Point (pI)

56.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 116 - 162 2.3e-06 Ring finger domain
zf-RING_11 PF17123 117 - 147 3.3e-08 RING-like zinc finger
VWA_CoxE PF05762 277 - 393 3.9e-07 VWA domain containing CoxE-like protein
VWA PF00092 281 - 449 5.2e-22 von Willebrand factor type A domain
VWA_3 PF13768 281 - 444 4.4e-19 von Willebrand factor type A domain
VWA_2 PF13519 282 - 388 7.3e-19 von Willebrand factor type A domain
Vwaint PF14624 636 - 723 2.8e-12 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1046, 2143
AatII GACGTC 1 cut(s) 1607
Acc36I ACCTGC 3 cut(s) 1046, 2143, 2188
AccB1I GGYRCC 1 cut(s) 1319
AccI GTMKAC 1 cut(s) 1557
AciI CCGC 4 cut(s) 752, 1586, 1747, 2112
AclWI GGATC 2 cut(s) 547, 1274
AcsI RAATTY 5 cut(s) 34, 225, 319, 769, 1848
AcuI CTGAAG 5 cut(s) 225, 837, 1106, 1554, 1788
AcyI GRCGYC 1 cut(s) 1604
AfaI GTAC 5 cut(s) 187, 605, 629, 832, 1631
AfiI CCNNNNNNNGG 5 cut(s) 1878, 1879, 2019, 2046, 2047
AflII CTTAAG 1 cut(s) 719
AflIII ACRYGT 2 cut(s) 18, 1471
AjnI CCWGG 3 cut(s) 138, 1435, 2095
AjuI GAANNNNNNNTTGG 4 cut(s) 304, 336, 1742, 1774
AluBI AGCT 9 cut(s) 233, 548, 908, 1583, 1643, 1772, 1778, 1912, 2018
AluI AGCT 9 cut(s) 233, 548, 908, 1583, 1643, 1772, 1778, 1912, 2018
Alw21I GWGCWC 3 cut(s) 416, 799, 1822
Alw26I GTCTC 4 cut(s) 9, 155, 1050, 1462
Alw44I GTGCAC 2 cut(s) 795, 1818
AlwI GGATC 2 cut(s) 547, 1274
Ama87I CYCGRG 1 cut(s) 623
AoxI GGCC 5 cut(s) 388, 820, 935, 1691, 2010
ApaLI GTGCAC 2 cut(s) 795, 1818
ApeKI GCWGC 7 cut(s) 332, 548, 580, 583, 870, 1744, 1868
ApoI RAATTY 5 cut(s) 34, 225, 319, 769, 1848
ArsI GACNNNNNNTTYG 2 cut(s) 1711, 1743
AspLEI GCGC 2 cut(s) 1594, 2185
AspS9I GGNCC 3 cut(s) 935, 1102, 2010
AsuC2I CCSGG 2 cut(s) 706, 1963
AsuHPI GGTGA 5 cut(s) 675, 1425, 1453, 1682, 2111
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 1 cut(s) 1102
AxyI CCTNAGG 1 cut(s) 1695
BaeGI GKGCMC 2 cut(s) 799, 1822
BaeI ACNNNNGTAYC 2 cut(s) 611, 644
BanI GGYRCC 1 cut(s) 1319
BbsI GAAGAC 2 cut(s) 291, 1376
Bbv12I GWGCWC 3 cut(s) 416, 799, 1822
BbvCI CCTCAGC 1 cut(s) 1779
BbvI GCAGC 7 cut(s) 319, 535, 592, 595, 882, 1756, 1880
BceAI ACGGC 1 cut(s) 2099
BciT130I CCWGG 3 cut(s) 140, 1437, 2097
BclI TGATCA 3 cut(s) 102, 295, 340
BcnI CCSGG 2 cut(s) 706, 1963
BcoDI GTCTC 4 cut(s) 9, 155, 1050, 1462
BfaI CTAG 5 cut(s) 978, 1034, 1224, 1640, 2019
BfmI CTRYAG 1 cut(s) 1773
BfrI CTTAAG 1 cut(s) 719
BfuAI ACCTGC 3 cut(s) 1046, 2143, 2188
BisI GCNGC 9 cut(s) 333, 549, 581, 584, 753, 871, 1745, 1869, 2112
BlsI GCNGC 9 cut(s) 334, 550, 582, 585, 754, 872, 1746, 1870, 2113
Bme1390I CCNGG 5 cut(s) 140, 706, 1437, 1963, 2097
Bme18I GGWCC 1 cut(s) 1102
BmeT110I CYCGRG 1 cut(s) 623
BmgT120I GGNCC 3 cut(s) 935, 1102, 2010
BmiI GGNNCC 3 cut(s) 621, 936, 1321
BmrFI CCNGG 5 cut(s) 140, 706, 1437, 1963, 2097
BmrI ACTGGG 2 cut(s) 1124, 1241
BmsI GCATC 3 cut(s) 344, 1149, 1439
BmuI ACTGGG 2 cut(s) 1124, 1241
BpiI GAAGAC 2 cut(s) 291, 1376
BpmI CTGGAG 3 cut(s) 980, 1832, 2079
Bpu10I CCTNAGC 3 cut(s) 636, 1401, 1779
BpuEI CTTGAG 1 cut(s) 884
BpuMI CCSGG 2 cut(s) 706, 1963
BsaBI GATNNNNATC 1 cut(s) 1278
BsaHI GRCGYC 1 cut(s) 1604
BsaI GGTCTC 1 cut(s) 155
BsaJI CCNNGG 3 cut(s) 704, 823, 1436
BsaWI WCCGGW 1 cut(s) 2072
Bsc4I CCNNNNNNNGG 5 cut(s) 1878, 1879, 2019, 2046, 2047
Bse1I ACTGG 3 cut(s) 1130, 1201, 1247
Bse21I CCTNAGG 1 cut(s) 1695
Bse3DI GCAATG 1 cut(s) 1071
Bse8I GATNNNNATC 1 cut(s) 1278
BseBI CCWGG 3 cut(s) 140, 1437, 2097
BseDI CCNNGG 3 cut(s) 704, 823, 1436
BseGI GGATG 4 cut(s) 564, 608, 1029, 1143
BseJI GATNNNNATC 1 cut(s) 1278
BseLI CCNNNNNNNGG 5 cut(s) 1878, 1879, 2019, 2046, 2047
BseMI GCAATG 1 cut(s) 1071
BseNI ACTGG 3 cut(s) 1130, 1201, 1247
BseRI GAGGAG 2 cut(s) 516, 549
BseSI GKGCMC 2 cut(s) 799, 1822
BseXI GCAGC 7 cut(s) 319, 535, 592, 595, 882, 1756, 1880
BseYI CCCAGC 1 cut(s) 1283
BshFI GGCC 5 cut(s) 390, 822, 937, 1693, 2012
BshNI GGYRCC 1 cut(s) 1319
BsiHKAI GWGCWC 3 cut(s) 416, 799, 1822
BsiHKCI CYCGRG 1 cut(s) 623
BsiSI CCGG 3 cut(s) 706, 1962, 2073
BsiWI CGTACG 1 cut(s) 830
BslFI GGGAC 1 cut(s) 686
BslI CCNNNNNNNGG 5 cut(s) 1878, 1879, 2019, 2046, 2047
BsmAI GTCTC 4 cut(s) 9, 155, 1050, 1462
BsmFI GGGAC 1 cut(s) 686
BsnI GGCC 5 cut(s) 390, 822, 937, 1693, 2012
Bso31I GGTCTC 1 cut(s) 155
BsoBI CYCGRG 1 cut(s) 623
Bsp1286I GDGCHC 3 cut(s) 416, 799, 1822
Bsp1407I TGTACA 1 cut(s) 1629
Bsp143I GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
Bsp19I CCATGG 1 cut(s) 823
BspACI CCGC 4 cut(s) 752, 1586, 1747, 2112
BspANI GGCC 5 cut(s) 390, 822, 937, 1693, 2012
BspHI TCATGA 1 cut(s) 1276
BspLI GGNNCC 3 cut(s) 621, 936, 1321
BspMI ACCTGC 3 cut(s) 1046, 2143, 2188
BspPI GGATC 2 cut(s) 547, 1274
BspT107I GGYRCC 1 cut(s) 1319
BspTI CTTAAG 1 cut(s) 719
BspTNI GGTCTC 1 cut(s) 155
BsrDI GCAATG 1 cut(s) 1071
BsrGI TGTACA 1 cut(s) 1629
BsrI ACTGG 3 cut(s) 1130, 1201, 1247
BssECI CCNNGG 3 cut(s) 704, 823, 1436
BssMI GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
BssNI GRCGYC 1 cut(s) 1604
BssT1I CCWWGG 1 cut(s) 823
Bst2UI CCWGG 3 cut(s) 140, 1437, 2097
Bst4CI ACNGT 7 cut(s) 422, 853, 1194, 1420, 1567, 1723, 1892
Bst6I CTCTTC 4 cut(s) 269, 976, 1530, 2162
BstACI GRCGYC 1 cut(s) 1604
BstAFI CTTAAG 1 cut(s) 719
BstAPI GCANNNNNTGC 1 cut(s) 1061
BstAUI TGTACA 1 cut(s) 1629
BstC8I GCNNGC 6 cut(s) 875, 906, 1296, 1590, 1968, 2109
BstDSI CCRYGG 1 cut(s) 823
BstF5I GGATG 4 cut(s) 564, 608, 1029, 1143
BstHHI GCGC 2 cut(s) 1594, 2185
BstKTI GATC 8 cut(s) 105, 298, 343, 555, 1114, 1276, 1282, 1741
BstMAI GTCTC 4 cut(s) 9, 155, 1050, 1462
BstMBI GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
BstNI CCWGG 3 cut(s) 140, 1437, 2097
BstNSI RCATGY 5 cut(s) 22, 877, 1298, 1475, 1630
BstSCI CCNGG 5 cut(s) 138, 704, 1435, 1961, 2095
BstSFI CTRYAG 1 cut(s) 1773
BstSLI GKGCMC 2 cut(s) 799, 1822
BstV1I GCAGC 7 cut(s) 319, 535, 592, 595, 882, 1756, 1880
BstV2I GAAGAC 2 cut(s) 291, 1376
BstXI CCANNNNNNTGG 1 cut(s) 1259
Bsu36I CCTNAGG 1 cut(s) 1695
BsuRI GGCC 5 cut(s) 390, 822, 937, 1693, 2012
BtgI CCRYGG 1 cut(s) 823
BtgZI GCGATG 1 cut(s) 561
BtsCI GGATG 4 cut(s) 564, 608, 1029, 1143
BtsI GCAGTG 1 cut(s) 402
BtsIMutI CAGTG 3 cut(s) 402, 418, 1396
BveI ACCTGC 3 cut(s) 1046, 2143, 2188
Cac8I GCNNGC 6 cut(s) 875, 906, 1296, 1590, 1968, 2109
CciI TCATGA 1 cut(s) 1276
CfoI GCGC 2 cut(s) 1594, 2185
Cfr13I GGNCC 3 cut(s) 935, 1102, 2010
CsiI ACCWGGT 1 cut(s) 138
Csp6I GTAC 5 cut(s) 186, 604, 628, 831, 1630
CspCI CAANNNNNGTGG 2 cut(s) 416, 451
CviQI GTAC 5 cut(s) 186, 604, 628, 831, 1630
DpnI GATC 8 cut(s) 104, 297, 342, 554, 1113, 1275, 1281, 1740
DpnII GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
Eam1104I CTCTTC 4 cut(s) 269, 976, 1530, 2162
EarI CTCTTC 4 cut(s) 269, 976, 1530, 2162
Eco130I CCWWGG 1 cut(s) 823
Eco147I AGGCCT 1 cut(s) 1693
Eco31I GGTCTC 1 cut(s) 155
Eco47I GGWCC 1 cut(s) 1102
Eco57I CTGAAG 5 cut(s) 225, 837, 1106, 1554, 1788
Eco81I CCTNAGG 1 cut(s) 1695
Eco88I CYCGRG 1 cut(s) 623
EcoO109I RGGNCCY 2 cut(s) 935, 1102
EcoRI GAATTC 2 cut(s) 34, 319
EcoRII CCWGG 3 cut(s) 138, 1435, 2095
EcoT14I CCWWGG 1 cut(s) 823
EcoT22I ATGCAT 2 cut(s) 1296, 1628
ErhI CCWWGG 1 cut(s) 823
FaqI GGGAC 1 cut(s) 686
FbaI TGATCA 3 cut(s) 102, 295, 340
FblI GTMKAC 1 cut(s) 1557
Fnu4HI GCNGC 9 cut(s) 333, 549, 581, 584, 753, 871, 1745, 1869, 2112
FokI GGATG 4 cut(s) 551, 595, 1016, 1130
Fsp4HI GCNGC 9 cut(s) 333, 549, 581, 584, 753, 871, 1745, 1869, 2112
FspBI CTAG 5 cut(s) 978, 1034, 1224, 1640, 2019
GlaI GCGC 2 cut(s) 1593, 2184
GluI GCNGC 9 cut(s) 333, 549, 581, 584, 753, 871, 1745, 1869, 2112
GsaI CCCAGC 1 cut(s) 1287
GsuI CTGGAG 3 cut(s) 980, 1832, 2079
HaeIII GGCC 5 cut(s) 390, 822, 937, 1693, 2012
HapII CCGG 3 cut(s) 706, 1962, 2073
HhaI GCGC 2 cut(s) 1594, 2185
Hin1I GRCGYC 1 cut(s) 1604
Hin6I GCGC 2 cut(s) 1592, 2183
HinP1I GCGC 2 cut(s) 1592, 2183
HincII GTYRAC 1 cut(s) 678
HindII GTYRAC 1 cut(s) 678
HpaII CCGG 3 cut(s) 706, 1962, 2073
HphI GGTGA 5 cut(s) 675, 1425, 1453, 1682, 2111
Hpy166II GTNNAC 6 cut(s) 16, 678, 797, 1252, 1558, 1820
Hpy188I TCNGA 9 cut(s) 222, 328, 340, 655, 817, 943, 1156, 1306, 2147
Hpy188III TCNNGA 9 cut(s) 635, 978, 997, 1019, 1277, 1403, 1571, 1811, 1983
Hpy8I GTNNAC 6 cut(s) 16, 678, 797, 1252, 1558, 1820
HpyAV CCTTC 8 cut(s) 200, 658, 812, 905, 948, 1073, 1110, 2051
HpyCH4III ACNGT 7 cut(s) 422, 853, 1194, 1420, 1567, 1723, 1892
HpyCH4IV ACGT 3 cut(s) 64, 861, 1604
HpySE526I ACGT 3 cut(s) 64, 861, 1604
Hsp92I GRCGYC 1 cut(s) 1604
HspAI GCGC 2 cut(s) 1592, 2183
Ksp22I TGATCA 3 cut(s) 102, 295, 340
Kzo9I GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
LmnI GCTCC 1 cut(s) 1588
Lsp1109I GCAGC 7 cut(s) 319, 535, 592, 595, 882, 1756, 1880
LweI GCATC 3 cut(s) 344, 1149, 1439
MabI ACCWGGT 1 cut(s) 138
MaeI CTAG 5 cut(s) 978, 1034, 1224, 1640, 2019
MaeII ACGT 3 cut(s) 64, 861, 1604
MaeIII GTNAC 2 cut(s) 847, 910
MalI GATC 8 cut(s) 104, 297, 342, 554, 1113, 1275, 1281, 1740
MboI GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
MfeI CAATTG 1 cut(s) 349
MhlI GDGCHC 3 cut(s) 416, 799, 1822
MluCI AATT 9 cut(s) 34, 180, 225, 319, 349, 769, 1547, 1848, 1894
MlyI GAGTC 6 cut(s) 718, 743, 993, 1052, 1352, 1980
MmeI TCCRAC 1 cut(s) 1498
Mph1103I ATGCAT 2 cut(s) 1296, 1628
MseI TTAA 4 cut(s) 75, 119, 720, 807
MslI CAYNNNNRTG 2 cut(s) 807, 1476
MspA1I CMGCKG 2 cut(s) 548, 1747
MspCI CTTAAG 1 cut(s) 719
MspI CCGG 3 cut(s) 706, 1962, 2073
MspR9I CCNGG 5 cut(s) 140, 706, 1437, 1963, 2097
MunI CAATTG 1 cut(s) 349
MvaI CCWGG 3 cut(s) 140, 1437, 2097
NciI CCSGG 2 cut(s) 706, 1963
NcoI CCATGG 1 cut(s) 823
NdeII GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
NlaIV GGNNCC 3 cut(s) 621, 936, 1321
NmeAIII GCCGAG 1 cut(s) 509
NmuCI GTSAC 1 cut(s) 910
NsiI ATGCAT 2 cut(s) 1296, 1628
NspI RCATGY 5 cut(s) 22, 877, 1298, 1475, 1630
PaeI GCATGC 2 cut(s) 877, 1298
PagI TCATGA 1 cut(s) 1276
PaqCI CACCTGC 2 cut(s) 1046, 2143
PceI AGGCCT 1 cut(s) 1693
PciI ACATGT 2 cut(s) 18, 1471
PcsI WCGNNNNNNNCGW 1 cut(s) 1963
PfeI GAWTC 8 cut(s) 758, 812, 1211, 1216, 1337, 1574, 2102, 2173
Pfl23II CGTACG 1 cut(s) 830
PflFI GACNNNGTC 1 cut(s) 2192
PkrI GCNGC 9 cut(s) 334, 550, 582, 585, 754, 872, 1746, 1870, 2113
PleI GAGTC 6 cut(s) 718, 742, 992, 1051, 1352, 1980
PpsI GAGTC 6 cut(s) 718, 742, 992, 1051, 1352, 1980
PpuMI RGGWCCY 1 cut(s) 1102
PscI ACATGT 2 cut(s) 18, 1471
Psp5II RGGWCCY 1 cut(s) 1102
Psp6I CCWGG 3 cut(s) 138, 1435, 2095
PspFI CCCAGC 1 cut(s) 1283
PspGI CCWGG 3 cut(s) 138, 1435, 2095
PspLI CGTACG 1 cut(s) 830
PspN4I GGNNCC 3 cut(s) 621, 936, 1321
PspPI GGNCC 3 cut(s) 935, 1102, 2010
PspPPI RGGWCCY 1 cut(s) 1102
PsyI GACNNNGTC 1 cut(s) 2192
PvuII CAGCTG 1 cut(s) 548
RsaI GTAC 5 cut(s) 187, 605, 629, 832, 1631
RsaNI GTAC 5 cut(s) 186, 604, 628, 831, 1630
RseI CAYNNNNRTG 2 cut(s) 807, 1476
SaqAI TTAA 4 cut(s) 75, 119, 720, 807
SatI GCNGC 9 cut(s) 333, 549, 581, 584, 753, 871, 1745, 1869, 2112
Sau3AI GATC 8 cut(s) 102, 295, 340, 552, 1111, 1273, 1279, 1738
Sau96I GGNCC 3 cut(s) 935, 1102, 2010
SchI GAGTC 6 cut(s) 718, 743, 993, 1052, 1352, 1980
ScrFI CCNGG 5 cut(s) 140, 706, 1437, 1963, 2097
SduI GDGCHC 3 cut(s) 416, 799, 1822
SexAI ACCWGGT 1 cut(s) 138
SfaNI GCATC 3 cut(s) 344, 1149, 1439
SfcI CTRYAG 1 cut(s) 1773
SinI GGWCC 1 cut(s) 1102
SmiMI CAYNNNNRTG 2 cut(s) 807, 1476
SmlI CTYRAG 2 cut(s) 719, 899
SmoI CTYRAG 2 cut(s) 719, 899
SphI GCATGC 2 cut(s) 877, 1298
Sse9I AATT 9 cut(s) 34, 180, 225, 319, 349, 769, 1547, 1848, 1894
SseBI AGGCCT 1 cut(s) 1693
SsiI CCGC 4 cut(s) 752, 1586, 1747, 2112
SspI AATATT 1 cut(s) 1758
SspMI CTAG 5 cut(s) 978, 1034, 1224, 1640, 2019
StuI AGGCCT 1 cut(s) 1693
StyD4I CCNGG 5 cut(s) 138, 704, 1435, 1961, 2095
StyI CCWWGG 1 cut(s) 823
TaaI ACNGT 7 cut(s) 422, 853, 1194, 1420, 1567, 1723, 1892
TaiI ACGT 3 cut(s) 67, 864, 1607
TaqI TCGA 2 cut(s) 1114, 1214
TasI AATT 9 cut(s) 34, 180, 225, 319, 349, 769, 1547, 1848, 1894
TatI WGTACW 1 cut(s) 1629
TauI GCSGC 2 cut(s) 755, 2114
TfiI GAWTC 8 cut(s) 758, 812, 1211, 1216, 1337, 1574, 2102, 2173
Tru1I TTAA 4 cut(s) 75, 119, 720, 807
Tru9I TTAA 4 cut(s) 75, 119, 720, 807
TscAI CASTG 3 cut(s) 409, 425, 1396
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 7 cut(s) 332, 548, 580, 583, 870, 1744, 1868
Tsp45I GTSAC 1 cut(s) 910
TspDTI ATGAA 6 cut(s) 332, 675, 1321, 1502, 1958, 2070
TspGWI ACGGA 2 cut(s) 997, 1855
TspRI CASTG 3 cut(s) 409, 425, 1396
Tth111I GACNNNGTC 1 cut(s) 2192
Vha464I CTTAAG 1 cut(s) 719
VneI GTGCAC 2 cut(s) 795, 1818
VpaK11BI GGWCC 1 cut(s) 1102
XapI RAATTY 5 cut(s) 34, 225, 319, 769, 1848
XbaI TCTAGA 1 cut(s) 977
XceI RCATGY 5 cut(s) 22, 877, 1298, 1475, 1630
XcmI CCANNNNNNNNNTGG 1 cut(s) 136
XmiI GTMKAC 1 cut(s) 1557
XspI CTAG 5 cut(s) 978, 1034, 1224, 1640, 2019
ZraI GACGTC 1 cut(s) 1605
Zsp2I ATGCAT 2 cut(s) 1296, 1628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.