FvH4_3g11772

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000360
Physical Location & Seq
Forward (+)
6951330 .. 6954216
2887 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11772.t1

Sequence Viewer

Length: 1710 bp
ATGGGCACTCACTTCCCATCGCAGCAGCCAACCCGTTGGTGTTATCCACAGCACCAGTACATGCAGGAACCTCCTGAGCCACTTACCTTTTCTGACGATGAACCTCTCCCACAGTGCACCTCATCCATTCAATCCTCTGCCCCTCAGAATATAACAGTTAAGACTCATACAGAGTCCTCTGCAATCTCTTGTGCAGAATCAATCCCAAATTTTCCTGTACTTGTCAGCATTCTTGCACCGCCCCTTCAGGATTCTGAGGGCCATGGTCGTACTCCCATTGATCTGGTAACAGTTCTAGATGTAAGTGGCAGCATGGAAGGCACAAAGCTTTCCCTTCTCAAGCAAGCTGTCAGATTTGTCATAGAAAACTTGGGGCCTTCGGATAGACTTTCTATAGTTTTGTTCTCATCAAGTTCTAGAAGAGTCTTTCCTCTGCAGAGAATGACAGTTGATGGCCGTGAAAGTGCCGTTATAGCCATTGAGTCTCTTAGAGCAGATGGTGGAACAAACATTGCAGAAGGACTCAGGAAAGGATCTAAAGTCCTTGAAGATCGAAGGGAAAGAAATCCAGTTTCCAGTATCATCCTCTTATCTGATGGCAAAGATACCTACAATATAACTGCAAATCGACTGTTAAACCAGTTGCCTAATTCGATTCGTTCTAGTGACATGCAACAAGAAATCCCAGTCCACACATTTGGATTTGGCTACGACCATGATCCCAACATTATGCATGCTATATCTGATGTGTCAGGTGGCACCTTTTCGTTCATTGAATCAGTTGGAATGATACAAGATTCCTTTGCTCTGTGTATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTGACACTAAGGTCAGCATCGCCTGGGGTGAAGATATTAGCAATACCGTCAGGGAGACACGTGAATGAGATTTTTGATGAGGGTCAGCAAGGTGTTATTCATGTTGGAAATATGTATGCTGAAGAGCAGAAACAATTTCTGGTCTACCTCTTTGTTCCAGAATCCTCAGCTCCTCATACTAAGACGTCGTTGTTAGAGGTGTTGTGCATGTACAAAGATCTAGCTTCAAATGAGTTCATCCAGGTGCAAGGTGAGAAAATAGAGATACTGAGACCTGAGGTTTGTTCCCCTGCTGAAAAGACAGTGTCTTTGGAGGTTGATCGGCAGCGCAACAGAATTTTGGTGGCGGAAGCTATTGCTGAGGCACAAAGGTTGGCTGAGATGGGAAATCTGGAGGCTGCACAGGCTCTTTTGGCTCAACGGAAAGAAATGCTCTTAACATCTCCAGCATCCCAAGCTGGGGATTATCACAGTAATTTGTTTGAAACTGAGCTTAGAGAAGTCATGGAAAGAATGGCAAGTATGAAGTTGTATAAACAAACCGGGCGTGCTTATTCTCTTGCAGTAAACAGTTCCCATATGTCACAAAGGGCCAGTACTAGGGGTGACGCAAGTGCCTCCTGTCTCAATGCAGGTTCAGTTGGGGGCAGGAGGAGGGGCCTCCGTAGTCGCAGTTCCTATACGGCTCTCAATGCTGCTCCGGGTGAATTCCATCAACCACTTGCCTCGGCTCTTAATGCTGCTCCAGGTGAATTGCATCAACCATCTGTCGCGGTTGGTGTTTTCGAGACGCCTGCTATGGTCAGAATGGTACGAAGATCACAGAATAGAAATCAACCTGGACCATATTACGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

570

Amino Acids

62.28

Weight (kDa)

6.01

Isoelectric Point (pI)

64.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA_CoxE PF05762 90 - 206 8.3e-08 VWA domain containing CoxE-like protein
VWA PF00092 94 - 260 1.3e-21 von Willebrand factor type A domain
VWA_3 PF13768 94 - 257 7.1e-19 von Willebrand factor type A domain
VWA_2 PF13519 95 - 201 1e-18 von Willebrand factor type A domain
WAV3_C PF25243 390 - 457 6.6e-06 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 446 - 559 1.3e-09 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 862
AatII GACGTC 1 cut(s) 1040
Acc36I ACCTGC 1 cut(s) 1475
AccB1I GGYRCC 1 cut(s) 758
AccI GTMKAC 1 cut(s) 996
AccII CGCG 1 cut(s) 1625
AciI CCGC 3 cut(s) 239, 1199, 1625
AclWI GGATC 2 cut(s) 541, 713
AcoI YGGCCR 1 cut(s) 454
AcsI RAATTY 3 cut(s) 208, 1188, 1559
AcuI CTGAAG 2 cut(s) 230, 993
AcvI CACGTG 1 cut(s) 913
AcyI GRCGYC 2 cut(s) 1037, 1643
AfaI GTAC 6 cut(s) 59, 219, 271, 1064, 1450, 1665
AfiI CCNNNNNNNGG 3 cut(s) 1311, 1312, 1452
AflIII ACRYGT 1 cut(s) 910
AgsI TTSAA 5 cut(s) 131, 548, 776, 1080, 1337
AjnI CCWGG 4 cut(s) 874, 1092, 1597, 1690
AluBI AGCT 7 cut(s) 328, 347, 1022, 1076, 1205, 1310, 1345
AluI AGCT 7 cut(s) 328, 347, 1022, 1076, 1205, 1310, 1345
Alw21I GWGCWC 1 cut(s) 119
Alw26I GTCTC 5 cut(s) 489, 901, 1117, 1481, 1634
Alw44I GTGCAC 1 cut(s) 115
AlwI GGATC 2 cut(s) 541, 713
AoxI GGCC 5 cut(s) 259, 374, 454, 1443, 1510
ApaLI GTGCAC 1 cut(s) 115
ApeKI GCWGC 7 cut(s) 22, 25, 309, 1177, 1250, 1547, 1592
ApoI RAATTY 3 cut(s) 208, 1188, 1559
ArsI GACNNNNNNTTYG 4 cut(s) 1116, 1144, 1148, 1176
AspLEI GCGC 1 cut(s) 1182
AspS9I GGNCC 5 cut(s) 259, 374, 1443, 1510, 1694
AsuC2I CCSGG 2 cut(s) 1396, 1554
AsuHPI GGTGA 5 cut(s) 892, 1115, 1469, 1568, 1613
AvaII GGWCC 1 cut(s) 1694
AxyI CCTNAGG 1 cut(s) 1128
BaeGI GKGCMC 2 cut(s) 8, 119
BanI GGYRCC 1 cut(s) 758
BbrPI CACGTG 1 cut(s) 913
BbsI GAAGAC 1 cut(s) 815
Bbv12I GWGCWC 1 cut(s) 119
BbvCI CCTCAGC 2 cut(s) 1018, 1212
BbvI GCAGC 7 cut(s) 34, 37, 321, 1189, 1237, 1534, 1579
BccI CCATC 7 cut(s) 25, 446, 491, 590, 1228, 1572, 1624
BceAI ACGGC 3 cut(s) 441, 452, 1551
BcgI CGANNNNNNTGC 2 cut(s) 1628, 1662
BciT130I CCWGG 4 cut(s) 876, 1094, 1599, 1692
BcnI CCSGG 2 cut(s) 1396, 1554
BcoDI GTCTC 5 cut(s) 489, 901, 1117, 1481, 1634
BfaI CTAG 5 cut(s) 296, 417, 663, 1073, 1452
BfmI CTRYAG 2 cut(s) 393, 434
BfuAI ACCTGC 1 cut(s) 1475
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 7 cut(s) 23, 26, 310, 1178, 1251, 1548, 1593
BlsI GCNGC 7 cut(s) 24, 27, 311, 1179, 1252, 1549, 1594
BmcAI AGTACT 1 cut(s) 1450
Bme1390I CCNGG 6 cut(s) 876, 1094, 1396, 1554, 1599, 1692
Bme18I GGWCC 1 cut(s) 1694
BmgT120I GGNCC 5 cut(s) 259, 374, 1443, 1510, 1694
BmiI GGNNCC 4 cut(s) 69, 375, 760, 1511
BmrFI CCNGG 6 cut(s) 876, 1094, 1396, 1554, 1599, 1692
BmrI ACTGGG 1 cut(s) 680
BmsI GCATC 3 cut(s) 878, 1310, 1618
BmuI ACTGGG 1 cut(s) 680
BpiI GAAGAC 1 cut(s) 815
BpmI CTGGAG 3 cut(s) 1265, 1281, 1581
Bpu10I CCTNAGC 4 cut(s) 75, 840, 1018, 1212
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 2 cut(s) 1396, 1554
BsaAI YACGTR 1 cut(s) 913
BsaHI GRCGYC 2 cut(s) 1037, 1643
BsaI GGTCTC 1 cut(s) 1117
BsaJI CCNNGG 3 cut(s) 262, 875, 1578
Bsc4I CCNNNNNNNGG 3 cut(s) 1311, 1312, 1452
Bse1I ACTGG 6 cut(s) 55, 569, 576, 640, 686, 1446
Bse21I CCTNAGG 1 cut(s) 1128
Bse3DI GCAATG 1 cut(s) 510
BseBI CCWGG 4 cut(s) 876, 1094, 1599, 1692
BseDI CCNNGG 3 cut(s) 262, 875, 1578
BseGI GGATG 4 cut(s) 122, 582, 1089, 1301
BseLI CCNNNNNNNGG 3 cut(s) 1311, 1312, 1452
BseMI GCAATG 1 cut(s) 510
BseNI ACTGG 6 cut(s) 55, 569, 576, 640, 686, 1446
BseRI GAGGAG 2 cut(s) 1014, 1519
BseSI GKGCMC 2 cut(s) 8, 119
BseXI GCAGC 7 cut(s) 34, 37, 321, 1189, 1237, 1534, 1579
BseYI CCCAGC 1 cut(s) 1310
BsgI GTGCAG 2 cut(s) 213, 1236
Bsh1236I CGCG 1 cut(s) 1625
BshFI GGCC 5 cut(s) 261, 376, 456, 1445, 1512
BshNI GGYRCC 1 cut(s) 758
BsiHKAI GWGCWC 1 cut(s) 119
BsiSI CCGG 2 cut(s) 1395, 1553
BslI CCNNNNNNNGG 3 cut(s) 1311, 1312, 1452
BsmAI GTCTC 5 cut(s) 489, 901, 1117, 1481, 1634
BsmBI CGTCTC 1 cut(s) 1634
BsmI GAATGC 1 cut(s) 228
BsnI GGCC 5 cut(s) 261, 376, 456, 1445, 1512
Bso31I GGTCTC 1 cut(s) 1117
Bsp1286I GDGCHC 2 cut(s) 8, 119
Bsp1407I TGTACA 1 cut(s) 1062
Bsp143I GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
Bsp19I CCATGG 1 cut(s) 262
BspACI CCGC 3 cut(s) 239, 1199, 1625
BspANI GGCC 5 cut(s) 261, 376, 456, 1445, 1512
BspFNI CGCG 1 cut(s) 1625
BspLI GGNNCC 4 cut(s) 69, 375, 760, 1511
BspMAI CTGCAG 1 cut(s) 438
BspMI ACCTGC 1 cut(s) 1475
BspPI GGATC 2 cut(s) 541, 713
BspQI GCTCTTC 1 cut(s) 969
BspT107I GGYRCC 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 1117
BsrDI GCAATG 1 cut(s) 510
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 6 cut(s) 55, 569, 576, 640, 686, 1446
BssECI CCNNGG 3 cut(s) 262, 875, 1578
BssMI GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
BssNI GRCGYC 2 cut(s) 1037, 1643
BssT1I CCWWGG 1 cut(s) 262
Bst2UI CCWGG 4 cut(s) 876, 1094, 1599, 1692
Bst4CI ACNGT 9 cut(s) 114, 157, 292, 448, 633, 900, 1156, 1325, 1424
Bst6I CTCTTC 2 cut(s) 415, 969
BstACI GRCGYC 2 cut(s) 1037, 1643
BstAUI TGTACA 1 cut(s) 1062
BstBAI YACGTR 1 cut(s) 913
BstC8I GCNNGC 4 cut(s) 345, 735, 1401, 1647
BstDSI CCRYGG 1 cut(s) 262
BstF5I GGATG 4 cut(s) 122, 582, 1089, 1301
BstFNI CGCG 1 cut(s) 1625
BstHHI GCGC 1 cut(s) 1182
BstKTI GATC 7 cut(s) 283, 536, 553, 721, 1072, 1174, 1673
BstMAI GTCTC 5 cut(s) 489, 901, 1117, 1481, 1634
BstMBI GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
BstMWI GCNNNNNNNGC 7 cut(s) 318, 473, 1256, 1265, 1307, 1544, 1589
BstNI CCWGG 4 cut(s) 876, 1094, 1599, 1692
BstNSI RCATGY 4 cut(s) 64, 673, 737, 1063
BstSCI CCNGG 6 cut(s) 874, 1092, 1394, 1552, 1597, 1690
BstSFI CTRYAG 2 cut(s) 393, 434
BstSLI GKGCMC 2 cut(s) 8, 119
BstUI CGCG 1 cut(s) 1625
BstV1I GCAGC 7 cut(s) 34, 37, 321, 1189, 1237, 1534, 1579
BstV2I GAAGAC 1 cut(s) 815
BstX2I RGATCY 2 cut(s) 533, 1069
BstXI CCANNNNNNTGG 3 cut(s) 36, 283, 698
BstYI RGATCY 2 cut(s) 533, 1069
Bsu36I CCTNAGG 1 cut(s) 1128
BsuRI GGCC 5 cut(s) 261, 376, 456, 1445, 1512
BtgI CCRYGG 1 cut(s) 262
BtgZI GCGATG 2 cut(s) 3, 855
BtsCI GGATG 4 cut(s) 122, 582, 1089, 1301
BtsIMutI CAGTG 3 cut(s) 119, 835, 1161
BveI ACCTGC 1 cut(s) 1475
Cac8I GCNNGC 4 cut(s) 345, 735, 1401, 1647
CfoI GCGC 1 cut(s) 1182
Cfr13I GGNCC 5 cut(s) 259, 374, 1443, 1510, 1694
CseI GACGC 2 cut(s) 1469, 1651
Csp6I GTAC 6 cut(s) 58, 218, 270, 1063, 1449, 1664
CviAII CATG 9 cut(s) 61, 263, 313, 670, 716, 734, 953, 1060, 1357
CviQI GTAC 6 cut(s) 58, 218, 270, 1063, 1449, 1664
DpnI GATC 7 cut(s) 282, 535, 552, 720, 1071, 1173, 1672
DpnII GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
DrdI GACNNNNNNGTC 1 cut(s) 862
DseDI GACNNNNNNGTC 1 cut(s) 862
EaeI YGGCCR 1 cut(s) 454
Eam1104I CTCTTC 2 cut(s) 415, 969
EarI CTCTTC 2 cut(s) 415, 969
EciI GGCGGA 1 cut(s) 1214
Eco130I CCWWGG 1 cut(s) 262
Eco31I GGTCTC 1 cut(s) 1117
Eco47I GGWCC 1 cut(s) 1694
Eco57I CTGAAG 2 cut(s) 230, 993
Eco72I CACGTG 1 cut(s) 913
Eco81I CCTNAGG 1 cut(s) 1128
EcoO109I RGGNCCY 2 cut(s) 374, 1510
EcoRI GAATTC 1 cut(s) 1559
EcoRII CCWGG 4 cut(s) 874, 1092, 1597, 1690
EcoT14I CCWWGG 1 cut(s) 262
EcoT22I ATGCAT 1 cut(s) 735
ErhI CCWWGG 1 cut(s) 262
Esp3I CGTCTC 1 cut(s) 1634
FaeI CATG 9 cut(s) 64, 266, 316, 673, 719, 737, 956, 1063, 1360
FatI CATG 9 cut(s) 60, 262, 312, 669, 715, 733, 952, 1059, 1356
FauNDI CATATG 1 cut(s) 1431
FblI GTMKAC 1 cut(s) 996
Fnu4HI GCNGC 7 cut(s) 23, 26, 310, 1178, 1251, 1548, 1593
FokI GGATG 4 cut(s) 109, 569, 1076, 1288
Fsp4HI GCNGC 7 cut(s) 23, 26, 310, 1178, 1251, 1548, 1593
FspBI CTAG 5 cut(s) 296, 417, 663, 1073, 1452
GlaI GCGC 1 cut(s) 1181
GluI GCNGC 7 cut(s) 23, 26, 310, 1178, 1251, 1548, 1593
GsaI CCCAGC 1 cut(s) 1314
GsuI CTGGAG 3 cut(s) 1265, 1281, 1581
HaeIII GGCC 5 cut(s) 261, 376, 456, 1445, 1512
HapII CCGG 2 cut(s) 1395, 1553
HgaI GACGC 2 cut(s) 1469, 1651
HhaI GCGC 1 cut(s) 1182
Hin1I GRCGYC 2 cut(s) 1037, 1643
Hin1II CATG 9 cut(s) 64, 266, 316, 673, 719, 737, 956, 1063, 1360
Hin6I GCGC 1 cut(s) 1180
HinP1I GCGC 1 cut(s) 1180
HindIII AAGCTT 1 cut(s) 326
HpaII CCGG 2 cut(s) 1395, 1553
HphI GGTGA 5 cut(s) 892, 1115, 1469, 1568, 1613
Hpy166II GTNNAC 4 cut(s) 117, 691, 997, 1420
Hpy188I TCNGA 8 cut(s) 94, 147, 256, 353, 382, 595, 745, 1658
Hpy188III TCNNGA 9 cut(s) 74, 248, 296, 417, 526, 842, 1010, 1244, 1639
Hpy8I GTNNAC 4 cut(s) 117, 691, 997, 1420
Hpy99I CGWCG 1 cut(s) 1042
HpyAV CCTTC 6 cut(s) 254, 311, 344, 387, 512, 549
HpyCH4III ACNGT 9 cut(s) 114, 157, 292, 448, 633, 900, 1156, 1325, 1424
HpyCH4IV ACGT 3 cut(s) 912, 1037, 1704
HpyF10VI GCNNNNNNNGC 7 cut(s) 318, 473, 1256, 1265, 1307, 1544, 1589
HpySE526I ACGT 3 cut(s) 912, 1037, 1704
Hsp92I GRCGYC 2 cut(s) 1037, 1643
Hsp92II CATG 9 cut(s) 64, 266, 316, 673, 719, 737, 956, 1063, 1360
HspAI GCGC 1 cut(s) 1180
Kzo9I GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
LguI GCTCTTC 1 cut(s) 969
LmnI GCTCC 3 cut(s) 1027, 1555, 1600
Lsp1109I GCAGC 7 cut(s) 34, 37, 321, 1189, 1237, 1534, 1579
LweI GCATC 3 cut(s) 878, 1310, 1618
MaeI CTAG 5 cut(s) 296, 417, 663, 1073, 1452
MaeII ACGT 3 cut(s) 912, 1037, 1704
MaeIII GTNAC 4 cut(s) 286, 665, 1434, 1457
MalI GATC 7 cut(s) 282, 535, 552, 720, 1071, 1173, 1672
MboI GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
MboII GAAGA 6 cut(s) 432, 560, 815, 895, 986, 1680
MflI RGATCY 2 cut(s) 533, 1069
MhlI GDGCHC 2 cut(s) 8, 119
MluCI AATT 7 cut(s) 208, 649, 986, 1188, 1327, 1559, 1604
MlyI GAGTC 5 cut(s) 157, 182, 432, 491, 516
MmeI TCCRAC 2 cut(s) 763, 937
Mph1103I ATGCAT 1 cut(s) 735
MseI TTAA 4 cut(s) 159, 635, 1289, 1587
MslI CAYNNNNRTG 2 cut(s) 915, 1094
MspI CCGG 2 cut(s) 1395, 1553
MspR9I CCNGG 6 cut(s) 876, 1094, 1396, 1554, 1599, 1692
Mva1269I GAATGC 1 cut(s) 228
MvaI CCWGG 4 cut(s) 876, 1094, 1599, 1692
MvnI CGCG 1 cut(s) 1625
MwoI GCNNNNNNNGC 7 cut(s) 318, 473, 1256, 1265, 1307, 1544, 1589
NciI CCSGG 2 cut(s) 1396, 1554
NcoI CCATGG 1 cut(s) 262
NdeI CATATG 1 cut(s) 1431
NdeII GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
NlaIII CATG 9 cut(s) 64, 266, 316, 673, 719, 737, 956, 1063, 1360
NlaIV GGNNCC 4 cut(s) 69, 375, 760, 1511
NmeAIII GCCGAG 1 cut(s) 1559
NmuCI GTSAC 3 cut(s) 665, 1434, 1457
NsiI ATGCAT 1 cut(s) 735
NspI RCATGY 4 cut(s) 64, 673, 737, 1063
PaeI GCATGC 1 cut(s) 737
PciSI GCTCTTC 1 cut(s) 969
PctI GAATGC 1 cut(s) 228
PfeI GAWTC 6 cut(s) 197, 251, 655, 776, 797, 1013
PflFI GACNNNGTC 1 cut(s) 1156
PkrI GCNGC 7 cut(s) 24, 27, 311, 1179, 1252, 1549, 1594
PleI GAGTC 5 cut(s) 157, 181, 431, 490, 516
PmaCI CACGTG 1 cut(s) 913
PmlI CACGTG 1 cut(s) 913
PpsI GAGTC 5 cut(s) 157, 181, 431, 490, 516
Ppu21I YACGTR 1 cut(s) 913
Psp6I CCWGG 4 cut(s) 874, 1092, 1597, 1690
PspCI CACGTG 1 cut(s) 913
PspFI CCCAGC 1 cut(s) 1310
PspGI CCWGG 4 cut(s) 874, 1092, 1597, 1690
PspN4I GGNNCC 4 cut(s) 69, 375, 760, 1511
PspPI GGNCC 5 cut(s) 259, 374, 1443, 1510, 1694
PsrI GAACNNNNNNTAC 2 cut(s) 1510, 1542
PstI CTGCAG 1 cut(s) 438
PsuI RGATCY 2 cut(s) 533, 1069
PsyI GACNNNGTC 1 cut(s) 1156
RsaI GTAC 6 cut(s) 59, 219, 271, 1064, 1450, 1665
RsaNI GTAC 6 cut(s) 58, 218, 270, 1063, 1449, 1664
RseI CAYNNNNRTG 2 cut(s) 915, 1094
SapI GCTCTTC 1 cut(s) 969
SaqAI TTAA 4 cut(s) 159, 635, 1289, 1587
SatI GCNGC 7 cut(s) 23, 26, 310, 1178, 1251, 1548, 1593
Sau3AI GATC 7 cut(s) 280, 533, 550, 718, 1069, 1171, 1670
Sau96I GGNCC 5 cut(s) 259, 374, 1443, 1510, 1694
ScaI AGTACT 1 cut(s) 1450
SchI GAGTC 5 cut(s) 157, 182, 432, 491, 516
ScrFI CCNGG 6 cut(s) 876, 1094, 1396, 1554, 1599, 1692
SduI GDGCHC 2 cut(s) 8, 119
SfaNI GCATC 3 cut(s) 878, 1310, 1618
SfcI CTRYAG 2 cut(s) 393, 434
SinI GGWCC 1 cut(s) 1694
SmiMI CAYNNNNRTG 2 cut(s) 915, 1094
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
SphI GCATGC 1 cut(s) 737
Sse9I AATT 7 cut(s) 208, 649, 986, 1188, 1327, 1559, 1604
SsiI CCGC 3 cut(s) 239, 1199, 1625
SspMI CTAG 5 cut(s) 296, 417, 663, 1073, 1452
StyD4I CCNGG 6 cut(s) 874, 1092, 1394, 1552, 1597, 1690
StyI CCWWGG 1 cut(s) 262
TaaI ACNGT 9 cut(s) 114, 157, 292, 448, 633, 900, 1156, 1325, 1424
TaiI ACGT 3 cut(s) 915, 1040, 1707
TaqI TCGA 4 cut(s) 553, 628, 653, 1638
TasI AATT 7 cut(s) 208, 649, 986, 1188, 1327, 1559, 1604
TatI WGTACW 4 cut(s) 57, 217, 1062, 1448
TfiI GAWTC 6 cut(s) 197, 251, 655, 776, 797, 1013
Tru1I TTAA 4 cut(s) 159, 635, 1289, 1587
Tru9I TTAA 4 cut(s) 159, 635, 1289, 1587
TscAI CASTG 3 cut(s) 119, 835, 1161
TseFI GTSAC 3 cut(s) 665, 1434, 1457
TseI GCWGC 7 cut(s) 22, 25, 309, 1177, 1250, 1547, 1592
Tsp45I GTSAC 3 cut(s) 665, 1434, 1457
TspDTI ATGAA 5 cut(s) 114, 760, 941, 1078, 1391
TspGWI ACGGA 2 cut(s) 1288, 1505
TspRI CASTG 3 cut(s) 119, 835, 1161
Tth111I GACNNNGTC 1 cut(s) 1156
VneI GTGCAC 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 1694
XapI RAATTY 3 cut(s) 208, 1188, 1559
XbaI TCTAGA 2 cut(s) 295, 416
XceI RCATGY 4 cut(s) 64, 673, 737, 1063
XmiI GTMKAC 1 cut(s) 996
XspI CTAG 5 cut(s) 296, 417, 663, 1073, 1452
ZraI GACGTC 1 cut(s) 1038
ZrmI AGTACT 1 cut(s) 1450
Zsp2I ATGCAT 1 cut(s) 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.