Rh5CG149300

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000360
Physical Location & Seq
Forward (+)
13746209 .. 13748372
2164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG149300.1

Sequence Viewer

Length: 1623 bp
ATGAGTTTCAAGTTAGTTTTTCTGAAGCTAGCTGCCGATATTGGAGCAAAATGGAATAAAAATAATTTACCTTTCCAAGTTCCCCCTCTTCAACAAAATAACAAGAGTAAACATGGCTTCGCCGATGATGAACCTCTCTCGTCCGCCACACTCCTCAAAACTTCTGGCCCCCAGAATGTAACAGTCAAGACTCATACAGAGACCTCTGCTATCTCTGCTGCCGAATCACGCCCCCATTATCCTGTTCTAGTTAGCATTTGTGCACCACCCCTTCAAGATCCCGATGGTGAAGGCCGTACACCCATTGACCTTGTTACAATTCTGGACGTAAGCGGTAGCATGCTTGGCCAAAAGCTTGAACTTGTCAAGCAAGCTGTCAAATTCGTCATTGAAAACATGGGGACTTCGGACAGACTGTCTATAGTATCATTCTCAACAACTTCTAAACGACTCCTTCCTCTCCGTAGAATGACTGTTAAGGGCCGTGAAAGTGCAATCCAAGCTGTCGAATCTCTTAGAGCAGATGGTGGAACTGACATTGCAGAAGGACTCAAGATAGGAACTCATATCCTTGAGGAGCGAAGGGAAAGGAACCCTGTTGCTAGCATCATCCTCTTATCGGATGGCCAAGATAACCACTGTGACAACCCAAGCCAAATGTTGAAGAAATTGCCTGCTTCAATTCGTTCTAGTGACATGCAACATGAAATCCCAGTCCACACATTTGGGTTTGGCAACGACCATGATGCAAAGATTATGCATGCTATATCTAATGTATCAGGGGGAACGTTTTCGTACATTGAATCAGTTGGCATAATACAAGACGCTTTTGCTCTGTGCATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAACTTCGCTTCACGGTGAGGTCAGCATCACCTGGGGTGAAGATCGTGGAAATACCATCAGGGAGACATGTCAGTCAGATTTCTGATGAGCAAGGTGTTGTTGATGTTGGAAATATGTATGCAGAAGAGGAGAAACAGTTTCTGGTGTACCTCTCAGTTCCACAATCCGCAGCTCCAGATACCAAGACGTCTTTGGTAGACGTTTTATGCGTGTACAAAGATCTTGGTTCAGATGAGTTTATCCCGGTCCAAGGTGAGAAAGTAGAGATAACGAGACCTGATTTTTGTTCTCCTGCAGAAATGGCAGTGTCTTTGGAGGTTGATCGGCAGCGGAACAGACTTTTGGTGGCTGATGCTATTGGAGAGGCACAAAGGTTGGCTGAAATGGGCAATCTGGAGGCTGCACGGGCGGTTTTGACTCAGCGAAGAGAAACTCTCATGACATCAACAGCAGCCAAAGCTGGGGATGATCTGAGTCATATGTTTGAAACTGAGCTTAAACAAATCATGGATAAAATGGCAAGTATGAATTTGTATGAAGAGGTGGGGCGTGCTTACGCTCTCTCAGGGATGAGTTCCCATGCACGGCAGAGGGCCTCGGCTAGGGGTAACGCAGCAGGCTCGTGCCTGGCCGACAAGGCAGGTCGCAAACAACTTGCTACTAAAGCAGCGGGTCGTGCTACTTTTGAAACACCCGCTATGGTTAGAATGGTAAGAAAATCACAGAATAAGAGGAAGTCTGGTTCTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

540

Amino Acids

58.6

Weight (kDa)

7.2

Isoelectric Point (pI)

45.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA PF00092 103 - 269 1.2e-22 von Willebrand factor type A domain
VWA_3 PF13768 103 - 264 7.6e-19 von Willebrand factor type A domain
VWA_2 PF13519 104 - 210 2.1e-18 von Willebrand factor type A domain
Vwaint PF14624 452 - 532 9.1e-12 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 942
AatII GACGTC 1 cut(s) 1061
Acc36I ACCTGC 1 cut(s) 1502
AccI GTMKAC 1 cut(s) 1068
AciI CCGC 7 cut(s) 144, 333, 1038, 1201, 1280, 1541, 1566
AclI AACGTT 1 cut(s) 788
AclWI GGATC 1 cut(s) 272
AcoI YGGCCR 3 cut(s) 346, 625, 1500
AcsI RAATTY 2 cut(s) 380, 1399
AcuI CTGAAG 1 cut(s) 44
AcyI GRCGYC 1 cut(s) 1058
AfaI GTAC 4 cut(s) 298, 797, 1019, 1085
AfiI CCNNNNNNNGG 5 cut(s) 619, 1121, 1332, 1455, 1473
AflIII ACRYGT 1 cut(s) 937
AhdI GACNNNNNGTC 1 cut(s) 415
AjnI CCWGG 2 cut(s) 901, 1497
AjuI GAANNNNNNNTTGG 2 cut(s) 1196, 1228
AloI GAACNNNNNNTCC 1 cut(s) 1597
AluBI AGCT 8 cut(s) 28, 32, 355, 374, 503, 1043, 1331, 1366
AluI AGCT 8 cut(s) 28, 32, 355, 374, 503, 1043, 1331, 1366
Alw21I GWGCWC 1 cut(s) 265
Alw26I GTCTC 3 cut(s) 194, 928, 1138
Alw44I GTGCAC 1 cut(s) 261
AlwI GGATC 1 cut(s) 272
AlwNI CAGNNNCTG 1 cut(s) 1012
AoxI GGCC 7 cut(s) 166, 292, 346, 481, 625, 1464, 1500
ApaLI GTGCAC 1 cut(s) 261
ApeKI GCWGC 8 cut(s) 32, 218, 1040, 1198, 1271, 1322, 1484, 1538
ApoI RAATTY 2 cut(s) 380, 1399
ArsI GACNNNNNNTTYG 2 cut(s) 1137, 1169
Asp700I GAANNNNTTC 1 cut(s) 790
AspS9I GGNCC 4 cut(s) 167, 481, 1117, 1464
AsuC2I CCSGG 1 cut(s) 1115
AsuHPI GGTGA 5 cut(s) 299, 891, 898, 919, 1136
AsuNHI GCTAGC 2 cut(s) 28, 602
AvaII GGWCC 1 cut(s) 1117
BaeGI GKGCMC 1 cut(s) 265
BalI TGGCCA 2 cut(s) 348, 627
BauI CACGAG 1 cut(s) 1492
BbsI GAAGAC 1 cut(s) 842
Bbv12I GWGCWC 1 cut(s) 265
BbvI GCAGC 8 cut(s) 19, 205, 1052, 1210, 1258, 1334, 1496, 1550
BccI CCATC 4 cut(s) 278, 518, 617, 934
BceAI ACGGC 3 cut(s) 279, 468, 1472
BcgI CGANNNNNNTGC 4 cut(s) 728, 762, 1473, 1507
BciT130I CCWGG 2 cut(s) 903, 1499
BcnI CCSGG 1 cut(s) 1115
BcoDI GTCTC 3 cut(s) 194, 928, 1138
BfaI CTAG 5 cut(s) 29, 248, 603, 690, 1473
BfmI CTRYAG 2 cut(s) 420, 1164
BfuAI ACCTGC 1 cut(s) 1502
BglI GCCNNNNNGGC 1 cut(s) 1508
BglII AGATCT 1 cut(s) 1090
BisI GCNGC 8 cut(s) 33, 219, 1041, 1199, 1272, 1323, 1485, 1539
BlsI GCNGC 8 cut(s) 34, 220, 1042, 1200, 1273, 1324, 1486, 1540
Bme1390I CCNGG 3 cut(s) 903, 1115, 1499
Bme18I GGWCC 1 cut(s) 1117
BmeRI GACNNNNNGTC 1 cut(s) 415
BmgT120I GGNCC 4 cut(s) 167, 481, 1117, 1464
BmiI GGNNCC 2 cut(s) 169, 593
BmrFI CCNGG 3 cut(s) 903, 1115, 1499
BmrI ACTGGG 1 cut(s) 707
BmsI GCATC 4 cut(s) 615, 736, 905, 1213
BmtI GCTAGC 2 cut(s) 32, 606
BmuI ACTGGG 1 cut(s) 707
BpiI GAAGAC 1 cut(s) 842
BplI GAGNNNNNCTC 2 cut(s) 1290, 1322
BpmI CTGGAG 2 cut(s) 1029, 1286
Bpu10I CCTNAGC 1 cut(s) 867
BpuEI CTTGAG 2 cut(s) 536, 593
BpuMI CCSGG 1 cut(s) 1115
BsaHI GRCGYC 1 cut(s) 1058
BsaI GGTCTC 2 cut(s) 194, 1138
BsaJI CCNNGG 3 cut(s) 902, 1120, 1467
BsaXI ACNNNNNCTCC 2 cut(s) 992, 1022
Bsc4I CCNNNNNNNGG 5 cut(s) 619, 1121, 1332, 1455, 1473
Bse1I ACTGG 1 cut(s) 713
Bse3DI GCAATG 1 cut(s) 537
BseBI CCWGG 2 cut(s) 903, 1499
BseDI CCNNGG 3 cut(s) 902, 1120, 1467
BseGI GGATG 4 cut(s) 609, 628, 1342, 1446
BseLI CCNNNNNNNGG 5 cut(s) 619, 1121, 1332, 1455, 1473
BseMI GCAATG 1 cut(s) 537
BseMII CTCAG 7 cut(s) 868, 881, 1038, 1304, 1334, 1353, 1449
BseNI ACTGG 1 cut(s) 713
BseRI GAGGAG 3 cut(s) 143, 590, 1013
BseSI GKGCMC 1 cut(s) 265
BseXI GCAGC 8 cut(s) 19, 205, 1052, 1210, 1258, 1334, 1496, 1550
BseYI CCCAGC 1 cut(s) 1331
BsgI GTGCAG 1 cut(s) 1257
BshFI GGCC 7 cut(s) 168, 294, 348, 483, 627, 1466, 1502
BsiHKAI GWGCWC 1 cut(s) 265
BsiSI CCGG 1 cut(s) 1115
BslFI GGGAC 1 cut(s) 415
BslI CCNNNNNNNGG 5 cut(s) 619, 1121, 1332, 1455, 1473
BsmAI GTCTC 3 cut(s) 194, 928, 1138
BsmFI GGGAC 1 cut(s) 415
BsnI GGCC 7 cut(s) 168, 294, 348, 483, 627, 1466, 1502
Bso31I GGTCTC 2 cut(s) 194, 1138
Bsp1286I GDGCHC 1 cut(s) 265
Bsp1407I TGTACA 1 cut(s) 1083
Bsp143I GATC 5 cut(s) 277, 912, 1090, 1192, 1339
BspACI CCGC 7 cut(s) 144, 333, 1038, 1201, 1280, 1541, 1566
BspANI GGCC 7 cut(s) 168, 294, 348, 483, 627, 1466, 1502
BspCNI CTCAG 7 cut(s) 867, 880, 1037, 1303, 1335, 1354, 1448
BspHI TCATGA 1 cut(s) 1308
BspLI GGNNCC 2 cut(s) 169, 593
BspMAI CTGCAG 1 cut(s) 1168
BspMI ACCTGC 1 cut(s) 1502
BspOI GCTAGC 2 cut(s) 32, 606
BspPI GGATC 1 cut(s) 272
BspTNI GGTCTC 2 cut(s) 194, 1138
BsrDI GCAATG 1 cut(s) 537
BsrGI TGTACA 1 cut(s) 1083
BsrI ACTGG 1 cut(s) 713
BssECI CCNNGG 3 cut(s) 902, 1120, 1467
BssMI GATC 5 cut(s) 277, 912, 1090, 1192, 1339
BssNI GRCGYC 1 cut(s) 1058
BssSI CACGAG 1 cut(s) 1492
BssT1I CCWWGG 1 cut(s) 1120
Bst2BI CACGAG 1 cut(s) 1492
Bst2UI CCWGG 2 cut(s) 903, 1499
Bst4CI ACNGT 6 cut(s) 184, 417, 475, 641, 886, 1008
Bst6I CTCTTC 4 cut(s) 93, 990, 1291, 1404
BstACI GRCGYC 1 cut(s) 1058
BstAUI TGTACA 1 cut(s) 1083
BstC8I GCNNGC 8 cut(s) 30, 341, 372, 604, 675, 762, 1422, 1489
BstDEI CTNAG 8 cut(s) 515, 854, 867, 1024, 1290, 1343, 1362, 1435
BstENI CCTNNNNNAGG 1 cut(s) 1471
BstF5I GGATG 4 cut(s) 609, 628, 1342, 1446
BstKTI GATC 5 cut(s) 280, 915, 1093, 1195, 1342
BstMAI GTCTC 3 cut(s) 194, 928, 1138
BstMBI GATC 5 cut(s) 277, 912, 1090, 1192, 1339
BstMWI GCNNNNNNNGC 9 cut(s) 215, 345, 500, 1172, 1277, 1328, 1508, 1535, 1547
BstNI CCWGG 2 cut(s) 903, 1499
BstNSI RCATGY 4 cut(s) 343, 700, 764, 941
BstSCI CCNGG 3 cut(s) 901, 1113, 1497
BstSFI CTRYAG 2 cut(s) 420, 1164
BstSLI GKGCMC 1 cut(s) 265
BstV1I GCAGC 8 cut(s) 19, 205, 1052, 1210, 1258, 1334, 1496, 1550
BstV2I GAAGAC 1 cut(s) 842
BstX2I RGATCY 2 cut(s) 277, 1090
BstXI CCANNNNNNTGG 1 cut(s) 725
BstYI RGATCY 2 cut(s) 277, 1090
BsuRI GGCC 7 cut(s) 168, 294, 348, 483, 627, 1466, 1502
BtsCI GGATG 4 cut(s) 609, 628, 1342, 1446
BtsI GCAGTG 1 cut(s) 1182
BtsIMutI CAGTG 3 cut(s) 637, 862, 1182
BveI ACCTGC 1 cut(s) 1502
Cac8I GCNNGC 8 cut(s) 30, 341, 372, 604, 675, 762, 1422, 1489
CaiI CAGNNNCTG 1 cut(s) 1012
CciI TCATGA 1 cut(s) 1308
Cfr13I GGNCC 4 cut(s) 167, 481, 1117, 1464
CseI GACGC 1 cut(s) 833
Csp6I GTAC 4 cut(s) 297, 796, 1018, 1084
CviQI GTAC 4 cut(s) 297, 796, 1018, 1084
DdeI CTNAG 8 cut(s) 515, 854, 867, 1024, 1290, 1343, 1362, 1435
DpnI GATC 5 cut(s) 279, 914, 1092, 1194, 1341
DpnII GATC 5 cut(s) 277, 912, 1090, 1192, 1339
DrdI GACNNNNNNGTC 1 cut(s) 942
DriI GACNNNNNGTC 1 cut(s) 415
DseDI GACNNNNNNGTC 1 cut(s) 942
EaeI YGGCCR 3 cut(s) 346, 625, 1500
Eam1104I CTCTTC 4 cut(s) 93, 990, 1291, 1404
Eam1105I GACNNNNNGTC 1 cut(s) 415
EarI CTCTTC 4 cut(s) 93, 990, 1291, 1404
EciI GGCGGA 1 cut(s) 133
Eco130I CCWWGG 1 cut(s) 1120
Eco31I GGTCTC 2 cut(s) 194, 1138
Eco47I GGWCC 1 cut(s) 1117
Eco57I CTGAAG 1 cut(s) 44
EcoNI CCTNNNNNAGG 1 cut(s) 1471
EcoO109I RGGNCCY 1 cut(s) 1464
EcoRII CCWGG 2 cut(s) 901, 1497
EcoT14I CCWWGG 1 cut(s) 1120
EcoT22I ATGCAT 1 cut(s) 762
ErhI CCWWGG 1 cut(s) 1120
FaqI GGGAC 1 cut(s) 415
FauI CCCGC 2 cut(s) 1534, 1573
FauNDI CATATG 1 cut(s) 1350
FblI GTMKAC 1 cut(s) 1068
Fnu4HI GCNGC 8 cut(s) 33, 219, 1041, 1199, 1272, 1323, 1485, 1539
FokI GGATG 4 cut(s) 596, 635, 1349, 1453
Fsp4HI GCNGC 8 cut(s) 33, 219, 1041, 1199, 1272, 1323, 1485, 1539
FspBI CTAG 5 cut(s) 29, 248, 603, 690, 1473
GluI GCNGC 8 cut(s) 33, 219, 1041, 1199, 1272, 1323, 1485, 1539
GsaI CCCAGC 1 cut(s) 1335
GsuI CTGGAG 2 cut(s) 1029, 1286
HaeIII GGCC 7 cut(s) 168, 294, 348, 483, 627, 1466, 1502
HapII CCGG 1 cut(s) 1115
HgaI GACGC 1 cut(s) 833
Hin1I GRCGYC 1 cut(s) 1058
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 8 cut(s) 190, 224, 450, 509, 549, 803, 1288, 1345
HpaII CCGG 1 cut(s) 1115
HphI GGTGA 5 cut(s) 299, 891, 898, 919, 1136
Hpy166II GTNNAC 7 cut(s) 110, 263, 299, 718, 1018, 1069, 1084
Hpy188I TCNGA 7 cut(s) 24, 409, 622, 948, 955, 1102, 1344
Hpy188III TCNNGA 9 cut(s) 187, 275, 281, 323, 553, 869, 1046, 1265, 1309
Hpy8I GTNNAC 7 cut(s) 110, 263, 299, 718, 1018, 1069, 1084
HpyAV CCTTC 5 cut(s) 281, 284, 464, 539, 576
HpyCH4III ACNGT 6 cut(s) 184, 417, 475, 641, 886, 1008
HpyCH4IV ACGT 4 cut(s) 327, 788, 1058, 1071
HpyF10VI GCNNNNNNNGC 9 cut(s) 215, 345, 500, 1172, 1277, 1328, 1508, 1535, 1547
HpyF3I CTNAG 8 cut(s) 515, 854, 867, 1024, 1290, 1343, 1362, 1435
HpySE526I ACGT 4 cut(s) 327, 788, 1058, 1071
Hsp92I GRCGYC 1 cut(s) 1058
Kzo9I GATC 5 cut(s) 277, 912, 1090, 1192, 1339
LmnI GCTCC 3 cut(s) 44, 577, 1048
Lsp1109I GCAGC 8 cut(s) 19, 205, 1052, 1210, 1258, 1334, 1496, 1550
LweI GCATC 4 cut(s) 615, 736, 905, 1213
MaeI CTAG 5 cut(s) 29, 248, 603, 690, 1473
MaeII ACGT 4 cut(s) 327, 788, 1058, 1071
MaeIII GTNAC 5 cut(s) 178, 313, 641, 692, 1478
MalI GATC 5 cut(s) 279, 914, 1092, 1194, 1341
MboI GATC 5 cut(s) 277, 912, 1090, 1192, 1339
MboII GAAGA 7 cut(s) 80, 676, 842, 922, 1007, 1308, 1421
MflI RGATCY 2 cut(s) 277, 1090
MhlI GDGCHC 1 cut(s) 265
MlsI TGGCCA 2 cut(s) 348, 627
MluCI AATT 6 cut(s) 64, 318, 380, 668, 681, 1399
MluNI TGGCCA 2 cut(s) 348, 627
MlyI GAGTC 5 cut(s) 184, 444, 543, 1282, 1354
MmeI TCCRAC 1 cut(s) 958
Mox20I TGGCCA 2 cut(s) 348, 627
Mph1103I ATGCAT 1 cut(s) 762
MroXI GAANNNNTTC 1 cut(s) 790
MscI TGGCCA 2 cut(s) 348, 627
MseI TTAA 2 cut(s) 477, 1368
Msp20I TGGCCA 2 cut(s) 348, 627
MspA1I CMGCKG 2 cut(s) 1201, 1541
MspI CCGG 1 cut(s) 1115
MspR9I CCNGG 3 cut(s) 903, 1115, 1499
MvaI CCWGG 2 cut(s) 903, 1499
MwoI GCNNNNNNNGC 9 cut(s) 215, 345, 500, 1172, 1277, 1328, 1508, 1535, 1547
NciI CCSGG 1 cut(s) 1115
NdeI CATATG 1 cut(s) 1350
NdeII GATC 5 cut(s) 277, 912, 1090, 1192, 1339
NheI GCTAGC 2 cut(s) 28, 602
NlaIV GGNNCC 2 cut(s) 169, 593
NmeAIII GCCGAG 1 cut(s) 1448
NmuCI GTSAC 2 cut(s) 641, 692
NsiI ATGCAT 1 cut(s) 762
NspI RCATGY 4 cut(s) 343, 700, 764, 941
PaeI GCATGC 2 cut(s) 343, 764
PagI TCATGA 1 cut(s) 1308
PciI ACATGT 1 cut(s) 937
PcsI WCGNNNNNNNCGW 1 cut(s) 1077
PdmI GAANNNNTTC 1 cut(s) 790
PfeI GAWTC 3 cut(s) 224, 509, 803
PkrI GCNGC 8 cut(s) 34, 220, 1042, 1200, 1273, 1324, 1486, 1540
PleI GAGTC 5 cut(s) 184, 444, 543, 1282, 1353
PpsI GAGTC 5 cut(s) 184, 444, 543, 1282, 1353
PscI ACATGT 1 cut(s) 937
Psp1406I AACGTT 1 cut(s) 788
Psp6I CCWGG 2 cut(s) 901, 1497
PspFI CCCAGC 1 cut(s) 1331
PspGI CCWGG 2 cut(s) 901, 1497
PspN4I GGNNCC 2 cut(s) 169, 593
PspPI GGNCC 4 cut(s) 167, 481, 1117, 1464
PstI CTGCAG 1 cut(s) 1168
PstNI CAGNNNCTG 1 cut(s) 1012
PsuI RGATCY 2 cut(s) 277, 1090
RsaI GTAC 4 cut(s) 298, 797, 1019, 1085
RsaNI GTAC 4 cut(s) 297, 796, 1018, 1084
SaqAI TTAA 2 cut(s) 477, 1368
SatI GCNGC 8 cut(s) 33, 219, 1041, 1199, 1272, 1323, 1485, 1539
Sau3AI GATC 5 cut(s) 277, 912, 1090, 1192, 1339
Sau96I GGNCC 4 cut(s) 167, 481, 1117, 1464
SchI GAGTC 5 cut(s) 184, 444, 543, 1282, 1354
ScrFI CCNGG 3 cut(s) 903, 1115, 1499
SduI GDGCHC 1 cut(s) 265
SfaNI GCATC 4 cut(s) 615, 736, 905, 1213
SfcI CTRYAG 2 cut(s) 420, 1164
SinI GGWCC 1 cut(s) 1117
SmlI CTYRAG 2 cut(s) 551, 572
SmoI CTYRAG 2 cut(s) 551, 572
SphI GCATGC 2 cut(s) 343, 764
Sse9I AATT 6 cut(s) 64, 318, 380, 668, 681, 1399
SsiI CCGC 7 cut(s) 144, 333, 1038, 1201, 1280, 1541, 1566
SspMI CTAG 5 cut(s) 29, 248, 603, 690, 1473
StyD4I CCNGG 3 cut(s) 901, 1113, 1497
StyI CCWWGG 1 cut(s) 1120
TaaI ACNGT 6 cut(s) 184, 417, 475, 641, 886, 1008
TaiI ACGT 4 cut(s) 330, 791, 1061, 1074
TaqI TCGA 1 cut(s) 507
TasI AATT 6 cut(s) 64, 318, 380, 668, 681, 1399
TatI WGTACW 1 cut(s) 1083
TfiI GAWTC 3 cut(s) 224, 509, 803
Tru1I TTAA 2 cut(s) 477, 1368
Tru9I TTAA 2 cut(s) 477, 1368
TscAI CASTG 3 cut(s) 644, 862, 1182
TseFI GTSAC 2 cut(s) 641, 692
TseI GCWGC 8 cut(s) 32, 218, 1040, 1198, 1271, 1322, 1484, 1538
Tsp45I GTSAC 2 cut(s) 641, 692
TspDTI ATGAA 4 cut(s) 144, 720, 1412, 1422
TspGWI ACGGA 1 cut(s) 452
TspRI CASTG 3 cut(s) 644, 862, 1182
VneI GTGCAC 1 cut(s) 261
VpaK11BI GGWCC 1 cut(s) 1117
XagI CCTNNNNNAGG 1 cut(s) 1471
XapI RAATTY 2 cut(s) 380, 1399
XceI RCATGY 4 cut(s) 343, 700, 764, 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 1060
XmiI GTMKAC 1 cut(s) 1068
XmnI GAANNNNTTC 1 cut(s) 790
XspI CTAG 5 cut(s) 29, 248, 603, 690, 1473
ZraI GACGTC 1 cut(s) 1059
Zsp2I ATGCAT 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.