Rw5G012390

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000360
Physical Location & Seq
Forward (+)
14583124 .. 14584700
1577 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G012390.1

Sequence Viewer

Length: 1485 bp
ATGGAGGAACTTGAATACCCTCCTGAGCCACCTACCTTCTCTGATGATGAACCTCTCCCATCCTTCACCTCACCTGTTCAATCCTCTTCCCACCAGAATATAACACTTAAGACTCATACAGAGTCCTCTGCTATCTCTGCTGCAGAATCAAGCCCAATTTTTTCTGTCCTTGTCAGAATCGGTGCACCACCCCTTCAGGATTCTGAGGGCCATGGTCGTACACCCATTGACCTTGTGACTGTTCTGGATGTCAGTGGCAGCATGGAAAGCACAAAGCTTTCCCTTCTCAAGCAAGCTGTCACGTTTGTCGTAGGAAACTTGGGGCCTTCAGCAGATGGTGGAACTGACATTGCAGAAGGACTCCAGAAAGGATGTCGAGTCCTTGAAGATCGAAGGGAAAATAACCCAGTTGCTAGCATCATCCTCTTATCTGATGGCCAAGACACATATAATAGAGGCAGAAGCCAACTGTTGAACCAATCGCCTGATTCACTTCGTTCTAGCGACATGAAGCATGAAATCCCAGTGCACACATTTAGATTTGGCTATGACCATGATGCAAACATTATGCATGCTATATCTGATGCATCAGGTGGCACATTTTCATTCATCGAATCAGTTGGAATGATACAAGACTCCTTTGCTCTGTGTATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAAGTTCGCCTAACAGAAAGGTCAGCATCGCCTGGGCTGAAGATTTTAGCAATACCATCAGGAAGACATGTGAATGAGATGTCTGATGAGGGTCAGCAAGGTGTTGTTCATCTTGGAAATATGTACGCTGAAGAGGAGAAACAATTTCTGGTGTACCTCTTAATTCCACAATCCTCAGCTCCACATACTAAGACGTCATTATTAGAGGTGTTATGCACGTACAAAGATCTAGCTTCAAATGAGCTGATGCAAGTGCAATGTGGGAAAGTAGAGATACTGAGACCTGAGGTTTGTTCCCTAGCTGAAAAGGCAGTGTCTTTGGAGGTTGATCGGCAGCGGAACAGAGTTTTGGTGGTTGAATCTATTGCAGAGGCACAAAGGTTGGCTGAGATGGGAAATCTGCAGGGCGCACAGGCTCTTTTGGCTCAACGAAAGGCAATTATATTAGCATCACCAGCGGCCCAAGCAGGAGATTTTCACAGTAACTTGTTTGAAACTGAGCTAAGAGAAATCATTGATAGAATGGCATCTATGGAATTGTATACACAAACCGGGCGTGCTTATGCTCTTGCAGGAATGAGTTCCCGTATGTCGCAAAGGCCCATAACTAGAGGTAACAGAAGAGCCTCTTGTCTCTCTGCTGATTTAGTTGCTTCCATGAGGGGTGTCCATTCCTATGTTGGTCACGATGCCTCCGGGGCAAATGCTTCATCAGTTGACGCCCCAGGTGATTCTTCTTCCCCAGTTGGTGCTTTTGAAATGGAACTAAAATCACAGAAGAGGAATCAATCTGGTCAATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

494

Amino Acids

53.31

Weight (kDa)

5.16

Isoelectric Point (pI)

58.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA_3 PF13768 97 - 203 5.4e-06 von Willebrand factor type A domain
Vwaint PF14624 393 - 433 6.1e-06 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 878
AccI GTMKAC 1 cut(s) 1223
AciI CCGC 2 cut(s) 1018, 1139
AcoI YGGCCR 1 cut(s) 436
AcuI CTGAAG 4 cut(s) 179, 312, 740, 831
AcyI GRCGYC 2 cut(s) 875, 1401
AfaI GTAC 4 cut(s) 220, 806, 836, 902
AflII CTTAAG 1 cut(s) 107
AflIII ACRYGT 1 cut(s) 748
AgsI TTSAA 8 cut(s) 14, 80, 386, 475, 918, 1040, 1175, 1439
AjnI CCWGG 2 cut(s) 712, 1405
AjuI GAANNNNNNNTTGG 2 cut(s) 1013, 1045
AluBI AGCT 7 cut(s) 277, 296, 860, 914, 925, 983, 1183
AluI AGCT 7 cut(s) 277, 296, 860, 914, 925, 983, 1183
Alw21I GWGCWC 2 cut(s) 187, 531
Alw26I GTCTC 2 cut(s) 955, 1319
Alw44I GTGCAC 2 cut(s) 183, 527
AoxI GGCC 5 cut(s) 208, 323, 436, 1140, 1280
ApaLI GTGCAC 2 cut(s) 183, 527
ApeKI GCWGC 3 cut(s) 140, 258, 1015
ArsI GACNNNNNNTTYG 2 cut(s) 954, 986
Asp700I GAANNNNTTC 1 cut(s) 1261
AspLEI GCGC 1 cut(s) 1091
AspS9I GGNCC 4 cut(s) 208, 323, 1141, 1281
AsuC2I CCSGG 2 cut(s) 1234, 1378
AsuHPI GGTGA 4 cut(s) 58, 63, 1125, 1421
AsuNHI GCTAGC 1 cut(s) 413
AxyI CCTNAGG 1 cut(s) 966
BaeGI GKGCMC 2 cut(s) 187, 531
BalI TGGCCA 1 cut(s) 438
BbsI GAAGAC 2 cut(s) 653, 751
Bbv12I GWGCWC 2 cut(s) 187, 531
BbvCI CCTCAGC 1 cut(s) 856
BbvI GCAGC 3 cut(s) 127, 270, 1027
BccI CCATC 5 cut(s) 67, 329, 428, 745, 1066
BciT130I CCWGG 2 cut(s) 714, 1407
BcnI CCSGG 2 cut(s) 1234, 1378
BcoDI GTCTC 2 cut(s) 955, 1319
BfaI CTAG 5 cut(s) 414, 501, 911, 980, 1290
BfmI CTRYAG 2 cut(s) 141, 1082
BfrI CTTAAG 1 cut(s) 107
BglI GCCNNNNNGGC 1 cut(s) 1379
BglII AGATCT 1 cut(s) 907
BisI GCNGC 4 cut(s) 141, 259, 1016, 1140
BlsI GCNGC 4 cut(s) 142, 260, 1017, 1141
Bme1390I CCNGG 4 cut(s) 714, 1234, 1378, 1407
BmgT120I GGNCC 4 cut(s) 208, 323, 1141, 1281
BmiI GGNNCC 1 cut(s) 324
BmrFI CCNGG 4 cut(s) 714, 1234, 1378, 1407
BmrI ACTGGG 3 cut(s) 401, 518, 1418
BmsI GCATC 9 cut(s) 426, 547, 574, 596, 716, 918, 1139, 1217, 1360
BmtI GCTAGC 1 cut(s) 417
BmuI ACTGGG 3 cut(s) 401, 518, 1418
BpiI GAAGAC 2 cut(s) 653, 751
BpmI CTGGAG 1 cut(s) 347
Bpu10I CCTNAGC 3 cut(s) 24, 678, 856
BpuEI CTTGAG 1 cut(s) 272
BpuMI CCSGG 2 cut(s) 1234, 1378
BsaAI YACGTR 1 cut(s) 900
BsaHI GRCGYC 2 cut(s) 875, 1401
BsaI GGTCTC 1 cut(s) 955
BsaJI CCNNGG 4 cut(s) 211, 713, 1377, 1405
BsaXI ACNNNNNCTCC 2 cut(s) 1358, 1388
Bse1I ACTGG 3 cut(s) 407, 524, 1424
Bse21I CCTNAGG 1 cut(s) 966
Bse3DI GCAATG 2 cut(s) 348, 944
BseBI CCWGG 2 cut(s) 714, 1407
BseDI CCNNGG 4 cut(s) 211, 713, 1377, 1405
BseGI GGATG 4 cut(s) 59, 253, 377, 420
BseMI GCAATG 2 cut(s) 348, 944
BseMII CTCAG 9 cut(s) 15, 195, 679, 692, 870, 950, 957, 1059, 1170
BseNI ACTGG 3 cut(s) 407, 524, 1424
BseRI GAGGAG 1 cut(s) 830
BseSI GKGCMC 2 cut(s) 187, 531
BseXI GCAGC 3 cut(s) 127, 270, 1027
BshFI GGCC 5 cut(s) 210, 325, 438, 1142, 1282
BsiHKAI GWGCWC 2 cut(s) 187, 531
BsiSI CCGG 2 cut(s) 1233, 1377
BsmAI GTCTC 2 cut(s) 955, 1319
BsnI GGCC 5 cut(s) 210, 325, 438, 1142, 1282
Bso31I GGTCTC 1 cut(s) 955
Bsp1286I GDGCHC 2 cut(s) 187, 531
Bsp143I GATC 3 cut(s) 388, 907, 1009
Bsp19I CCATGG 1 cut(s) 211
BspACI CCGC 2 cut(s) 1018, 1139
BspANI GGCC 5 cut(s) 210, 325, 438, 1142, 1282
BspCNI CTCAG 9 cut(s) 16, 196, 678, 691, 869, 951, 958, 1060, 1171
BspLI GGNNCC 1 cut(s) 324
BspMAI CTGCAG 2 cut(s) 145, 1086
BspOI GCTAGC 1 cut(s) 417
BspQI GCTCTTC 1 cut(s) 1297
BspTI CTTAAG 1 cut(s) 107
BspTNI GGTCTC 1 cut(s) 955
BsrDI GCAATG 2 cut(s) 348, 944
BsrI ACTGG 3 cut(s) 407, 524, 1424
BssECI CCNNGG 4 cut(s) 211, 713, 1377, 1405
BssMI GATC 3 cut(s) 388, 907, 1009
BssNAI GTATAC 1 cut(s) 1224
BssNI GRCGYC 2 cut(s) 875, 1401
BssT1I CCWWGG 1 cut(s) 211
Bst1107I GTATAC 1 cut(s) 1224
Bst2UI CCWGG 2 cut(s) 714, 1407
Bst4CI ACNGT 3 cut(s) 241, 471, 1163
Bst6I CTCTTC 4 cut(s) 91, 807, 1297, 1454
BstACI GRCGYC 2 cut(s) 875, 1401
BstAFI CTTAAG 1 cut(s) 107
BstBAI YACGTR 1 cut(s) 900
BstC8I GCNNGC 4 cut(s) 294, 415, 573, 1239
BstDSI CCRYGG 1 cut(s) 211
BstF5I GGATG 4 cut(s) 59, 253, 377, 420
BstHHI GCGC 1 cut(s) 1091
BstKTI GATC 3 cut(s) 391, 910, 1012
BstMAI GTCTC 2 cut(s) 955, 1319
BstMBI GATC 3 cut(s) 388, 907, 1009
BstMWI GCNNNNNNNGC 7 cut(s) 137, 267, 989, 1103, 1136, 1145, 1379
BstNI CCWGG 2 cut(s) 714, 1407
BstNSI RCATGY 2 cut(s) 575, 752
BstSCI CCNGG 4 cut(s) 712, 1232, 1376, 1405
BstSFI CTRYAG 2 cut(s) 141, 1082
BstSLI GKGCMC 2 cut(s) 187, 531
BstV1I GCAGC 3 cut(s) 127, 270, 1027
BstV2I GAAGAC 2 cut(s) 653, 751
BstX2I RGATCY 1 cut(s) 907
BstYI RGATCY 1 cut(s) 907
BstZ17I GTATAC 1 cut(s) 1224
Bsu36I CCTNAGG 1 cut(s) 966
BsuRI GGCC 5 cut(s) 210, 325, 438, 1142, 1282
BtgI CCRYGG 1 cut(s) 211
BtgZI GCGATG 1 cut(s) 693
BtsCI GGATG 4 cut(s) 59, 253, 377, 420
BtsI GCAGTG 1 cut(s) 999
BtsIMutI CAGTG 4 cut(s) 259, 531, 673, 999
Cac8I GCNNGC 4 cut(s) 294, 415, 573, 1239
CfoI GCGC 1 cut(s) 1091
Cfr13I GGNCC 4 cut(s) 208, 323, 1141, 1281
CseI GACGC 1 cut(s) 1409
Csp6I GTAC 4 cut(s) 219, 805, 835, 901
CviAII CATG 8 cut(s) 212, 262, 508, 515, 554, 572, 749, 1339
CviQI GTAC 4 cut(s) 219, 805, 835, 901
DpnI GATC 3 cut(s) 390, 909, 1011
DpnII GATC 3 cut(s) 388, 907, 1009
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 4 cut(s) 91, 807, 1297, 1454
EarI CTCTTC 4 cut(s) 91, 807, 1297, 1454
Eco130I CCWWGG 1 cut(s) 211
Eco31I GGTCTC 1 cut(s) 955
Eco57I CTGAAG 4 cut(s) 179, 312, 740, 831
Eco81I CCTNAGG 1 cut(s) 966
EcoO109I RGGNCCY 1 cut(s) 323
EcoRII CCWGG 2 cut(s) 712, 1405
EcoT14I CCWWGG 1 cut(s) 211
EcoT22I ATGCAT 2 cut(s) 573, 589
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 8 cut(s) 215, 265, 511, 518, 557, 575, 752, 1342
FalI AAGNNNNNCTT 2 cut(s) 1294, 1326
FatI CATG 8 cut(s) 211, 261, 507, 514, 553, 571, 748, 1338
FblI GTMKAC 1 cut(s) 1223
Fnu4HI GCNGC 4 cut(s) 141, 259, 1016, 1140
FokI GGATG 4 cut(s) 46, 260, 384, 407
Fsp4HI GCNGC 4 cut(s) 141, 259, 1016, 1140
FspBI CTAG 5 cut(s) 414, 501, 911, 980, 1290
GlaI GCGC 1 cut(s) 1090
GluI GCNGC 4 cut(s) 141, 259, 1016, 1140
GsuI CTGGAG 1 cut(s) 347
HaeIII GGCC 5 cut(s) 210, 325, 438, 1142, 1282
HapII CCGG 2 cut(s) 1233, 1377
HgaI GACGC 1 cut(s) 1409
HhaI GCGC 1 cut(s) 1091
Hin1I GRCGYC 2 cut(s) 875, 1401
Hin1II CATG 8 cut(s) 215, 265, 511, 518, 557, 575, 752, 1342
Hin6I GCGC 1 cut(s) 1089
HinP1I GCGC 1 cut(s) 1089
HincII GTYRAC 1 cut(s) 1399
HindII GTYRAC 1 cut(s) 1399
HindIII AAGCTT 1 cut(s) 275
HpaII CCGG 2 cut(s) 1233, 1377
HphI GGTGA 4 cut(s) 58, 63, 1125, 1421
Hpy166II GTNNAC 6 cut(s) 185, 221, 529, 835, 1224, 1399
Hpy188I TCNGA 6 cut(s) 43, 176, 205, 433, 583, 766
Hpy188III TCNNGA 7 cut(s) 23, 197, 245, 364, 680, 741, 1367
Hpy8I GTNNAC 6 cut(s) 185, 221, 529, 835, 1224, 1399
HpyAV CCTTC 7 cut(s) 46, 73, 203, 293, 336, 350, 387
HpyCH4III ACNGT 3 cut(s) 241, 471, 1163
HpyCH4IV ACGT 3 cut(s) 302, 875, 899
HpyF10VI GCNNNNNNNGC 7 cut(s) 137, 267, 989, 1103, 1136, 1145, 1379
HpySE526I ACGT 3 cut(s) 302, 875, 899
Hsp92I GRCGYC 2 cut(s) 875, 1401
Hsp92II CATG 8 cut(s) 215, 265, 511, 518, 557, 575, 752, 1342
HspAI GCGC 1 cut(s) 1089
Kzo9I GATC 3 cut(s) 388, 907, 1009
LguI GCTCTTC 1 cut(s) 1297
LmnI GCTCC 1 cut(s) 865
Lsp1109I GCAGC 3 cut(s) 127, 270, 1027
LweI GCATC 9 cut(s) 426, 547, 574, 596, 716, 918, 1139, 1217, 1360
MaeI CTAG 5 cut(s) 414, 501, 911, 980, 1290
MaeII ACGT 3 cut(s) 302, 875, 899
MaeIII GTNAC 5 cut(s) 235, 298, 1163, 1295, 1364
MalI GATC 3 cut(s) 390, 909, 1011
MboI GATC 3 cut(s) 388, 907, 1009
MflI RGATCY 1 cut(s) 907
MhlI GDGCHC 2 cut(s) 187, 531
MlsI TGGCCA 1 cut(s) 438
MluCI AATT 6 cut(s) 156, 824, 843, 1119, 1217, 1478
MluNI TGGCCA 1 cut(s) 438
MlyI GAGTC 5 cut(s) 106, 131, 354, 387, 629
MmeI TCCRAC 1 cut(s) 601
Mox20I TGGCCA 1 cut(s) 438
Mph1103I ATGCAT 2 cut(s) 573, 589
MroXI GAANNNNTTC 1 cut(s) 1261
MscI TGGCCA 1 cut(s) 438
MseI TTAA 2 cut(s) 108, 842
MslI CAYNNNNRTG 2 cut(s) 753, 1356
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 2 cut(s) 1018, 1139
MspCI CTTAAG 1 cut(s) 107
MspI CCGG 2 cut(s) 1233, 1377
MspR9I CCNGG 4 cut(s) 714, 1234, 1378, 1407
MvaI CCWGG 2 cut(s) 714, 1407
MwoI GCNNNNNNNGC 7 cut(s) 137, 267, 989, 1103, 1136, 1145, 1379
NciI CCSGG 2 cut(s) 1234, 1378
NcoI CCATGG 1 cut(s) 211
NdeII GATC 3 cut(s) 388, 907, 1009
NheI GCTAGC 1 cut(s) 413
NlaIII CATG 8 cut(s) 215, 265, 511, 518, 557, 575, 752, 1342
NlaIV GGNNCC 1 cut(s) 324
NmuCI GTSAC 3 cut(s) 235, 298, 1364
NsiI ATGCAT 2 cut(s) 573, 589
NspI RCATGY 2 cut(s) 575, 752
PaeI GCATGC 1 cut(s) 575
PciI ACATGT 1 cut(s) 748
PciSI GCTCTTC 1 cut(s) 1297
PdmI GAANNNNTTC 1 cut(s) 1261
PfeI GAWTC 8 cut(s) 146, 177, 200, 488, 614, 1040, 1412, 1465
PkrI GCNGC 4 cut(s) 142, 260, 1017, 1141
PleI GAGTC 5 cut(s) 106, 130, 354, 386, 629
PpsI GAGTC 5 cut(s) 106, 130, 354, 386, 629
Ppu21I YACGTR 1 cut(s) 900
PscI ACATGT 1 cut(s) 748
Psp6I CCWGG 2 cut(s) 712, 1405
PspGI CCWGG 2 cut(s) 712, 1405
PspN4I GGNNCC 1 cut(s) 324
PspPI GGNCC 4 cut(s) 208, 323, 1141, 1281
PstI CTGCAG 2 cut(s) 145, 1086
PsuI RGATCY 1 cut(s) 907
RsaI GTAC 4 cut(s) 220, 806, 836, 902
RsaNI GTAC 4 cut(s) 219, 805, 835, 901
RseI CAYNNNNRTG 2 cut(s) 753, 1356
SapI GCTCTTC 1 cut(s) 1297
SaqAI TTAA 2 cut(s) 108, 842
SatI GCNGC 4 cut(s) 141, 259, 1016, 1140
Sau3AI GATC 3 cut(s) 388, 907, 1009
Sau96I GGNCC 4 cut(s) 208, 323, 1141, 1281
SchI GAGTC 5 cut(s) 106, 131, 354, 387, 629
ScrFI CCNGG 4 cut(s) 714, 1234, 1378, 1407
SduI GDGCHC 2 cut(s) 187, 531
SfaNI GCATC 9 cut(s) 426, 547, 574, 596, 716, 918, 1139, 1217, 1360
SfcI CTRYAG 2 cut(s) 141, 1082
SmiMI CAYNNNNRTG 2 cut(s) 753, 1356
SmlI CTYRAG 2 cut(s) 107, 287
SmoI CTYRAG 2 cut(s) 107, 287
SphI GCATGC 1 cut(s) 575
Sse9I AATT 6 cut(s) 156, 824, 843, 1119, 1217, 1478
SsiI CCGC 2 cut(s) 1018, 1139
SspMI CTAG 5 cut(s) 414, 501, 911, 980, 1290
StyD4I CCNGG 4 cut(s) 712, 1232, 1376, 1405
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 3 cut(s) 241, 471, 1163
TaiI ACGT 3 cut(s) 305, 878, 902
TaqI TCGA 3 cut(s) 376, 391, 612
TasI AATT 6 cut(s) 156, 824, 843, 1119, 1217, 1478
TauI GCSGC 1 cut(s) 1142
TfiI GAWTC 8 cut(s) 146, 177, 200, 488, 614, 1040, 1412, 1465
Tru1I TTAA 2 cut(s) 108, 842
Tru9I TTAA 2 cut(s) 108, 842
TscAI CASTG 4 cut(s) 259, 531, 673, 999
TseFI GTSAC 3 cut(s) 235, 298, 1364
TseI GCWGC 3 cut(s) 140, 258, 1015
Tsp45I GTSAC 3 cut(s) 235, 298, 1364
TspDTI ATGAA 7 cut(s) 63, 524, 531, 594, 598, 779, 1380
TspRI CASTG 4 cut(s) 259, 531, 673, 999
Vha464I CTTAAG 1 cut(s) 107
VneI GTGCAC 2 cut(s) 183, 527
XceI RCATGY 2 cut(s) 575, 752
XcmI CCANNNNNNNNNTGG 1 cut(s) 1358
XmiI GTMKAC 1 cut(s) 1223
XmnI GAANNNNTTC 1 cut(s) 1261
XspI CTAG 5 cut(s) 414, 501, 911, 980, 1290
ZraI GACGTC 1 cut(s) 876
Zsp2I ATGCAT 2 cut(s) 573, 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.