FvH4_3g11770

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000360
Physical Location & Seq
Forward (+)
6943402 .. 6946345
2944 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11770.t1

Sequence Viewer

Length: 1791 bp
ATGTCGTCTCAGGCTGCATCTGCCCAATTAAACCATGTTCCATCACCTCAACAAAACGAGTTCGCTGATGATGAACCTCTGCCGTCCACCACACCTGCCGCTCAACCTTTGGGACCTCGGAAGGTAACAATCAAGACTCATACAGAGACCACTTCTATCCCTGCCGCTGATTCACGCCCACAATATCCTGCACTAGTCAGCATTTGCGCACCACCCCTTGAAGATCCTGATGGCGAAGGCCGTACACCCATTGACCTTGTTACAGTTCTGGACGTAAGCGGCAGCATGCAAGGCCAAAAGCTTGAACTTGTCAAGCAAGCTGTCAAATTTGTCATCGAAAACTTGGGGTCGTCAGATAGACTTTCTATAGTATCTTTTTCATCAACTGCTAGAACAGAATTTCCTCTCAGAAGAATGTCTGCTGACGGCCGTGAAGATGCCATCCGAGCCATTAACTCTCTCAGAACAGAGGACATGACCAATATTGCAGCAGGTCTCAAGATAGGAGCTCAGATCCTAAAAGGACGAAGGGAAAAGAACCCAGTTGCTAGCATCATCCTCTTATCTGATGGCCATGATAACCTTTCAAGTGTACCAGAAATGTTGAACAATTTGCCTTCTCCAATTCCTCCTCGCAATAACATGAAAGAGGAAATTCCAGTCCACACATTTGGATTTGGCAACGACCATGATCCATATAGCATGCATGCTATATCTGATGCATCAGGGGGTACCTTTTCATACATTGAATCAGTTGGCATGATACAAGATGGTTTCGCTTTGTGCATCGGTGGTCTTCTCAGTGTAGTGGCTCAAGAAGTTCGCCTCACGGTAAAGTCAGCTTCAAGTGGCGTGAAGATTGTATCGATACCATCGGGGAGACATGTGAATGAGGTTTCGGATGAGGGTCAGCAAGGTGTTGTTCATGTCGGAAATATGTACGCAGAAGAGGTGAAACAATTTCTGGTCTACCTCTCAGTTCCTCCATCCTCAGCTTCGGACAGTAAGACACCATTGTTAGACTTGTCATGCTCGTACAAAGATCCAGCTTCTGATGAGTTGATCCAGGTTCAAGGTGAAAGAGTAGAGATATCAAGACCTCAGTTTTGTTCTCCAGCTGAAGTGGCAGTGTCTTTGGAGGTTGATCGTCAGAGGAATAGACTTTTGGTGGCAGATGCCATTGGAGAGGCACAAAGGTTGGCTGAAATGGGAAATCTGGAGGGTGCACGCGAGGTTCTGACTCACCGAAGAAAAACTCTGTTGGCATCAGCAGCAGCCCTAGGTGGGGATAGTCTTAGCAAATTGCTTGAAACTGAGCTCAGAGAAGTGAGGGATCGGATGAAAAGTAGGGAAATGTACGAGTACGTAGGGCGTGCTTACGCTTGTGCAGGAATGAGTTCACATTCATTGCAGAGGGCCTCAGCTAGGGGTAACGCTAGAGGCTCGTGTCTCGCTGCCGGTTTAAAATTAGCTGCCAAAACTGGCTGCTTTGTTTATTCTAGGGGTCGTAGCGCCGGTGCTCATGGTGGCGGTGTTCGTAGTGGCGGTGGTCGTGGTTCCCGCGGTGGTCTTGGTTCCCGTGGCAGCTTTGGTGCCAGTGGACGTGGTTTCCGTGGTCGTGGAGCGGCTGGTCGTGGTGCCTATAGAAGTATGCTATTTAATGATGCTTCGTTACACGGTGACGAAGATGAAGCCGAGGATTGTGAGGCTGATCACCTCGTTGGTGCTTTTGAAACACCCGCTATGATTAGAATGGTGCAGAAATCACAGAAGAGGAATCGATCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

597

Amino Acids

63.57

Weight (kDa)

6.53

Isoelectric Point (pI)

45.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA PF00092 85 - 249 2.3e-25 von Willebrand factor type A domain
VWA_3 PF13768 85 - 246 7e-16 von Willebrand factor type A domain
VWA_2 PF13519 86 - 192 6.3e-20 von Willebrand factor type A domain
WAV3_C PF25243 381 - 451 8.1e-06 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 431 - 477 1.2e-09 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 103
Acc16I TGCGCA 1 cut(s) 208
Acc36I ACCTGC 2 cut(s) 103, 482
Acc65I GGTACC 1 cut(s) 731
AccB1I GGYRCC 3 cut(s) 731, 1592, 1637
AccBSI CCGCTC 2 cut(s) 101, 1625
AccI GTMKAC 1 cut(s) 969
AccII CGCG 2 cut(s) 1230, 1563
AciI CCGC 9 cut(s) 99, 165, 279, 1530, 1545, 1561, 1563, 1625, 1740
AclWI GGATC 6 cut(s) 218, 508, 686, 1037, 1057, 1341
AcoI YGGCCR 2 cut(s) 427, 571
AcsI RAATTY 3 cut(s) 326, 398, 654
AcuI CTGAAG 1 cut(s) 1140
AfaI GTAC 7 cut(s) 244, 594, 733, 941, 1037, 1358, 1364
AfiI CCNNNNNNNGG 3 cut(s) 1284, 1285, 1425
AflIII ACRYGT 1 cut(s) 883
AgsI TTSAA 9 cut(s) 221, 305, 588, 607, 749, 846, 1073, 1310, 1733
AhlI ACTAGT 1 cut(s) 193
AjiI CACGTC 1 cut(s) 1604
AjnI CCWGG 1 cut(s) 1065
AjuI GAANNNNNNNTTGG 2 cut(s) 1148, 1180
AloI GAACNNNNNNTCC 2 cut(s) 385, 417
Alw21I GWGCWC 4 cut(s) 511, 1228, 1320, 1522
Alw26I GTCTC 5 cut(s) 12, 140, 500, 874, 1454
Alw44I GTGCAC 1 cut(s) 1224
AlwI GGATC 6 cut(s) 218, 508, 686, 1037, 1057, 1341
AlwNI CAGNNNCTG 1 cut(s) 1052
AoxI GGCC 5 cut(s) 238, 292, 427, 571, 1416
ApaLI GTGCAC 1 cut(s) 1224
ApeKI GCWGC 9 cut(s) 14, 282, 488, 1271, 1274, 1454, 1472, 1485, 1584
ApoI RAATTY 3 cut(s) 326, 398, 654
ArsI GACNNNNNNTTYG 2 cut(s) 1089, 1121
Asp700I GAANNNNTTC 1 cut(s) 1396
Asp718I GGTACC 1 cut(s) 731
AspA2I CCTAGG 1 cut(s) 1279
AspLEI GCGC 2 cut(s) 209, 1514
AspS9I GGNCC 2 cut(s) 113, 1416
AsuHPI GGTGA 6 cut(s) 36, 964, 1088, 1235, 1691, 1706
AsuNHI GCTAGC 1 cut(s) 548
AvaII GGWCC 1 cut(s) 113
AvrII CCTAGG 1 cut(s) 1279
BaeGI GKGCMC 1 cut(s) 1228
BalI TGGCCA 1 cut(s) 573
BanI GGYRCC 3 cut(s) 731, 1592, 1637
BanII GRGCYC 2 cut(s) 511, 1320
BauI CACGAG 1 cut(s) 1444
BbsI GAAGAC 1 cut(s) 788
Bbv12I GWGCWC 4 cut(s) 511, 1228, 1320, 1522
BbvCI CCTCAGC 2 cut(s) 991, 1420
BbvI GCAGC 8 cut(s) 294, 500, 1283, 1286, 1441, 1459, 1472, 1596
BccI CCATC 7 cut(s) 49, 224, 449, 563, 764, 880, 994
BceAI ACGGC 4 cut(s) 67, 225, 414, 442
BciT130I CCWGG 1 cut(s) 1067
BclI TGATCA 1 cut(s) 1711
BcoDI GTCTC 5 cut(s) 12, 140, 500, 874, 1454
BcuI ACTAGT 1 cut(s) 193
BfaI CTAG 7 cut(s) 194, 390, 549, 1280, 1425, 1437, 1500
BfmI CTRYAG 2 cut(s) 366, 1642
BfoI RGCGCY 1 cut(s) 1515
BfuAI ACCTGC 2 cut(s) 103, 482
BlnI CCTAGG 1 cut(s) 1279
Bme1390I CCNGG 1 cut(s) 1067
Bme18I GGWCC 1 cut(s) 113
BmgBI CACGTC 1 cut(s) 1604
BmgT120I GGNCC 2 cut(s) 113, 1416
BmiI GGNNCC 6 cut(s) 114, 733, 1558, 1576, 1594, 1639
BmrFI CCNGG 1 cut(s) 1067
BmrI ACTGGG 1 cut(s) 536
BmsI GCATC 9 cut(s) 26, 427, 561, 709, 731, 795, 1165, 1274, 1654
BmtI GCTAGC 1 cut(s) 552
BmuI ACTGGG 1 cut(s) 536
BpiI GAAGAC 1 cut(s) 788
BpmI CTGGAG 2 cut(s) 1098, 1238
Bpu10I CCTNAGC 2 cut(s) 991, 1420
BpuEI CTTGAG 2 cut(s) 482, 798
Bsa29I ATCGAT 2 cut(s) 866, 1780
BsaAI YACGTR 1 cut(s) 1366
BsaI GGTCTC 2 cut(s) 140, 500
BsaJI CCNNGG 6 cut(s) 116, 1279, 1561, 1579, 1612, 1695
Bsc4I CCNNNNNNNGG 3 cut(s) 1284, 1285, 1425
Bse118I RCCGGY 2 cut(s) 1457, 1514
Bse1I ACTGG 4 cut(s) 542, 659, 1486, 1596
Bse3DI GCAATG 1 cut(s) 1406
BseBI CCWGG 1 cut(s) 1067
BseCI ATCGAT 2 cut(s) 866, 1780
BseDI CCNNGG 6 cut(s) 116, 1279, 1561, 1579, 1612, 1695
BseGI GGATG 5 cut(s) 441, 555, 907, 986, 1344
BseLI CCNNNNNNNGG 3 cut(s) 1284, 1285, 1425
BseMI GCAATG 1 cut(s) 1406
BseNI ACTGG 4 cut(s) 542, 659, 1486, 1596
BseRI GAGGAG 1 cut(s) 621
BseSI GKGCMC 1 cut(s) 1228
BseX3I CGGCCG 1 cut(s) 427
BseXI GCAGC 8 cut(s) 294, 500, 1283, 1286, 1441, 1459, 1472, 1596
BsgI GTGCAG 3 cut(s) 174, 1407, 1778
Bsh1236I CGCG 2 cut(s) 1230, 1563
Bsh1285I CGRYCG 1 cut(s) 430
BshFI GGCC 5 cut(s) 240, 294, 429, 573, 1418
BshNI GGYRCC 3 cut(s) 731, 1592, 1637
BshVI ATCGAT 2 cut(s) 866, 1780
BsiEI CGRYCG 1 cut(s) 430
BsiHKAI GWGCWC 4 cut(s) 511, 1228, 1320, 1522
BsiSI CCGG 2 cut(s) 1458, 1515
BslFI GGGAC 1 cut(s) 126
BslI CCNNNNNNNGG 3 cut(s) 1284, 1285, 1425
BsmAI GTCTC 5 cut(s) 12, 140, 500, 874, 1454
BsmBI CGTCTC 1 cut(s) 12
BsmFI GGGAC 1 cut(s) 126
BsnI GGCC 5 cut(s) 240, 294, 429, 573, 1418
Bso31I GGTCTC 2 cut(s) 140, 500
Bsp1286I GDGCHC 4 cut(s) 511, 1228, 1320, 1522
Bsp143I GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
BspACI CCGC 9 cut(s) 99, 165, 279, 1530, 1545, 1561, 1563, 1625, 1740
BspANI GGCC 5 cut(s) 240, 294, 429, 573, 1418
BspDI ATCGAT 2 cut(s) 866, 1780
BspFNI CGCG 2 cut(s) 1230, 1563
BspLI GGNNCC 6 cut(s) 114, 733, 1558, 1576, 1594, 1639
BspMI ACCTGC 2 cut(s) 103, 482
BspOI GCTAGC 1 cut(s) 552
BspPI GGATC 6 cut(s) 218, 508, 686, 1037, 1057, 1341
BspT107I GGYRCC 3 cut(s) 731, 1592, 1637
BspTNI GGTCTC 2 cut(s) 140, 500
BsrBI CCGCTC 2 cut(s) 101, 1625
BsrDI GCAATG 1 cut(s) 1406
BsrFI RCCGGY 2 cut(s) 1457, 1514
BsrI ACTGG 4 cut(s) 542, 659, 1486, 1596
BssAI RCCGGY 2 cut(s) 1457, 1514
BssECI CCNNGG 6 cut(s) 116, 1279, 1561, 1579, 1612, 1695
BssMI GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
BssSI CACGAG 1 cut(s) 1444
BssT1I CCWWGG 1 cut(s) 1279
Bst2BI CACGAG 1 cut(s) 1444
Bst2UI CCWGG 1 cut(s) 1067
Bst4CI ACNGT 4 cut(s) 265, 832, 1004, 1679
Bst6I CTCTTC 2 cut(s) 942, 1766
BstBAI YACGTR 1 cut(s) 1366
BstC8I GCNNGC 7 cut(s) 287, 318, 550, 704, 708, 1228, 1374
BstDSI CCRYGG 3 cut(s) 1561, 1579, 1612
BstENI CCTNNNNNAGG 1 cut(s) 1423
BstF5I GGATG 5 cut(s) 441, 555, 907, 986, 1344
BstFNI CGCG 2 cut(s) 1230, 1563
BstH2I RGCGCY 1 cut(s) 1515
BstHHI GCGC 2 cut(s) 209, 1514
BstKTI GATC 9 cut(s) 226, 516, 694, 1045, 1065, 1147, 1336, 1714, 1784
BstMAI GTCTC 5 cut(s) 12, 140, 500, 874, 1454
BstMBI GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
BstMCI CGRYCG 1 cut(s) 430
BstMWI GCNNNNNNNGC 5 cut(s) 20, 291, 446, 1124, 1271
BstNI CCWGG 1 cut(s) 1067
BstNSI RCATGY 4 cut(s) 289, 706, 710, 887
BstSCI CCNGG 1 cut(s) 1065
BstSFI CTRYAG 2 cut(s) 366, 1642
BstSLI GKGCMC 1 cut(s) 1228
BstSNI TACGTA 1 cut(s) 1366
BstUI CGCG 2 cut(s) 1230, 1563
BstV1I GCAGC 8 cut(s) 294, 500, 1283, 1286, 1441, 1459, 1472, 1596
BstV2I GAAGAC 1 cut(s) 788
BstX2I RGATCY 3 cut(s) 223, 513, 1042
BstXI CCANNNNNNTGG 1 cut(s) 671
BstYI RGATCY 3 cut(s) 223, 513, 1042
BstZI CGGCCG 1 cut(s) 427
Bsu15I ATCGAT 2 cut(s) 866, 1780
BsuRI GGCC 5 cut(s) 240, 294, 429, 573, 1418
BsuTUI ATCGAT 2 cut(s) 866, 1780
BtgI CCRYGG 3 cut(s) 1561, 1579, 1612
BtrI CACGTC 1 cut(s) 1604
BtsCI GGATG 5 cut(s) 441, 555, 907, 986, 1344
BtsI GCAGTG 1 cut(s) 1134
BtsIMutI CAGTG 3 cut(s) 808, 1134, 1603
BveI ACCTGC 2 cut(s) 103, 482
Cac8I GCNNGC 7 cut(s) 287, 318, 550, 704, 708, 1228, 1374
CaiI CAGNNNCTG 1 cut(s) 1052
CfoI GCGC 2 cut(s) 209, 1514
Cfr10I RCCGGY 2 cut(s) 1457, 1514
Cfr13I GGNCC 2 cut(s) 113, 1416
Cfr42I CCGCGG 1 cut(s) 1564
ClaI ATCGAT 2 cut(s) 866, 1780
Csp6I GTAC 7 cut(s) 243, 593, 732, 940, 1036, 1357, 1363
CviQI GTAC 7 cut(s) 243, 593, 732, 940, 1036, 1357, 1363
DpnI GATC 9 cut(s) 225, 515, 693, 1044, 1064, 1146, 1335, 1713, 1783
DpnII GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
DraI TTTAAA 1 cut(s) 1464
EaeI YGGCCR 2 cut(s) 427, 571
EagI CGGCCG 1 cut(s) 427
Eam1104I CTCTTC 2 cut(s) 942, 1766
EarI CTCTTC 2 cut(s) 942, 1766
Ecl136II GAGCTC 2 cut(s) 509, 1318
EclXI CGGCCG 1 cut(s) 427
Eco105I TACGTA 1 cut(s) 1366
Eco130I CCWWGG 1 cut(s) 1279
Eco24I GRGCYC 2 cut(s) 511, 1320
Eco31I GGTCTC 2 cut(s) 140, 500
Eco32I GATATC 1 cut(s) 1092
Eco47I GGWCC 1 cut(s) 113
Eco52I CGGCCG 1 cut(s) 427
Eco53kI GAGCTC 2 cut(s) 509, 1318
Eco57I CTGAAG 1 cut(s) 1140
EcoICRI GAGCTC 2 cut(s) 509, 1318
EcoNI CCTNNNNNAGG 1 cut(s) 1423
EcoO109I RGGNCCY 2 cut(s) 113, 1416
EcoRII CCWGG 1 cut(s) 1065
EcoRV GATATC 1 cut(s) 1092
EcoT14I CCWWGG 1 cut(s) 1279
EcoT22I ATGCAT 2 cut(s) 708, 724
EcoT38I GRGCYC 2 cut(s) 511, 1320
ErhI CCWWGG 1 cut(s) 1279
Esp3I CGTCTC 1 cut(s) 12
FaqI GGGAC 1 cut(s) 126
FauI CCCGC 2 cut(s) 1568, 1747
FbaI TGATCA 1 cut(s) 1711
FblI GTMKAC 1 cut(s) 969
FokI GGATG 5 cut(s) 428, 542, 914, 973, 1351
FriOI GRGCYC 2 cut(s) 511, 1320
FspBI CTAG 7 cut(s) 194, 390, 549, 1280, 1425, 1437, 1500
FspI TGCGCA 1 cut(s) 208
GlaI GCGC 2 cut(s) 208, 1513
GsuI CTGGAG 2 cut(s) 1098, 1238
HaeII RGCGCY 1 cut(s) 1515
HaeIII GGCC 5 cut(s) 240, 294, 429, 573, 1418
HapII CCGG 2 cut(s) 1458, 1515
HhaI GCGC 2 cut(s) 209, 1514
Hin6I GCGC 2 cut(s) 207, 1512
HinP1I GCGC 2 cut(s) 207, 1512
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 5 cut(s) 136, 170, 749, 1240, 1777
HpaII CCGG 2 cut(s) 1458, 1515
HphI GGTGA 6 cut(s) 36, 964, 1088, 1235, 1691, 1706
Hpy166II GTNNAC 8 cut(s) 87, 245, 593, 664, 970, 1226, 1400, 1601
Hpy188III TCNNGA 7 cut(s) 133, 227, 269, 499, 815, 1095, 1217
Hpy8I GTNNAC 8 cut(s) 87, 245, 593, 664, 970, 1226, 1400, 1601
HpyAV CCTTC 4 cut(s) 115, 230, 522, 627
HpyCH4III ACNGT 4 cut(s) 265, 832, 1004, 1679
HpyCH4IV ACGT 3 cut(s) 273, 1365, 1603
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 291, 446, 1124, 1271
HpySE526I ACGT 3 cut(s) 273, 1365, 1603
HspAI GCGC 2 cut(s) 207, 1512
KpnI GGTACC 1 cut(s) 735
Ksp22I TGATCA 1 cut(s) 1711
KspI CCGCGG 1 cut(s) 1564
Kzo9I GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
LmnI GCTCC 2 cut(s) 506, 1622
Lsp1109I GCAGC 8 cut(s) 294, 500, 1283, 1286, 1441, 1459, 1472, 1596
LweI GCATC 9 cut(s) 26, 427, 561, 709, 731, 795, 1165, 1274, 1654
MaeI CTAG 7 cut(s) 194, 390, 549, 1280, 1425, 1437, 1500
MaeII ACGT 3 cut(s) 273, 1365, 1603
MaeIII GTNAC 5 cut(s) 124, 259, 1430, 1671, 1679
MalI GATC 9 cut(s) 225, 515, 693, 1044, 1064, 1146, 1335, 1713, 1783
MbiI CCGCTC 2 cut(s) 101, 1625
MboI GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
MboII GAAGA 9 cut(s) 233, 423, 446, 788, 868, 959, 1260, 1697, 1783
MflI RGATCY 3 cut(s) 223, 513, 1042
MhlI GDGCHC 4 cut(s) 511, 1228, 1320, 1522
MlsI TGGCCA 1 cut(s) 573
MluCI AATT 9 cut(s) 26, 326, 398, 610, 624, 654, 959, 1301, 1466
MluNI TGGCCA 1 cut(s) 573
MlyI GAGTC 2 cut(s) 130, 1234
MmeI TCCRAC 1 cut(s) 910
Mox20I TGGCCA 1 cut(s) 573
Mph1103I ATGCAT 2 cut(s) 708, 724
MroXI GAANNNNTTC 1 cut(s) 1396
MscI TGGCCA 1 cut(s) 573
MseI TTAA 4 cut(s) 29, 453, 1463, 1659
MslI CAYNNNNRTG 1 cut(s) 888
Msp20I TGGCCA 1 cut(s) 573
MspA1I CMGCKG 3 cut(s) 167, 1118, 1563
MspI CCGG 2 cut(s) 1458, 1515
MspR9I CCNGG 1 cut(s) 1067
MvaI CCWGG 1 cut(s) 1067
MvnI CGCG 2 cut(s) 1230, 1563
MwoI GCNNNNNNNGC 5 cut(s) 20, 291, 446, 1124, 1271
NdeII GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
NheI GCTAGC 1 cut(s) 548
NlaIV GGNNCC 6 cut(s) 114, 733, 1558, 1576, 1594, 1639
NmeAIII GCCGAG 1 cut(s) 1720
NmuCI GTSAC 1 cut(s) 1679
NsbI TGCGCA 1 cut(s) 208
NsiI ATGCAT 2 cut(s) 708, 724
NspI RCATGY 4 cut(s) 289, 706, 710, 887
PaeI GCATGC 3 cut(s) 289, 706, 710
PaqCI CACCTGC 1 cut(s) 103
PciI ACATGT 1 cut(s) 883
PcsI WCGNNNNNNNCGW 1 cut(s) 1609
PdmI GAANNNNTTC 1 cut(s) 1396
PfeI GAWTC 3 cut(s) 170, 749, 1777
PleI GAGTC 2 cut(s) 130, 1234
PpsI GAGTC 2 cut(s) 130, 1234
Ppu21I YACGTR 1 cut(s) 1366
PpuMI RGGWCCY 1 cut(s) 113
PscI ACATGT 1 cut(s) 883
Psp124BI GAGCTC 2 cut(s) 511, 1320
Psp5II RGGWCCY 1 cut(s) 113
Psp6I CCWGG 1 cut(s) 1065
PspGI CCWGG 1 cut(s) 1065
PspN4I GGNNCC 6 cut(s) 114, 733, 1558, 1576, 1594, 1639
PspPI GGNCC 2 cut(s) 113, 1416
PspPPI RGGWCCY 1 cut(s) 113
PstNI CAGNNNCTG 1 cut(s) 1052
PsuI RGATCY 3 cut(s) 223, 513, 1042
PvuII CAGCTG 1 cut(s) 1118
RsaI GTAC 7 cut(s) 244, 594, 733, 941, 1037, 1358, 1364
RsaNI GTAC 7 cut(s) 243, 593, 732, 940, 1036, 1357, 1363
RseI CAYNNNNRTG 1 cut(s) 888
SacI GAGCTC 2 cut(s) 511, 1320
SacII CCGCGG 1 cut(s) 1564
SaqAI TTAA 4 cut(s) 29, 453, 1463, 1659
Sau3AI GATC 9 cut(s) 223, 513, 691, 1042, 1062, 1144, 1333, 1711, 1781
Sau96I GGNCC 2 cut(s) 113, 1416
SchI GAGTC 2 cut(s) 130, 1234
ScrFI CCNGG 1 cut(s) 1067
SduI GDGCHC 4 cut(s) 511, 1228, 1320, 1522
SfaNI GCATC 9 cut(s) 26, 427, 561, 709, 731, 795, 1165, 1274, 1654
SfcI CTRYAG 2 cut(s) 366, 1642
Sfr303I CCGCGG 1 cut(s) 1564
SgrAI CRCCGGYG 1 cut(s) 1514
SgrBI CCGCGG 1 cut(s) 1564
SinI GGWCC 1 cut(s) 113
SmiMI CAYNNNNRTG 1 cut(s) 888
SmlI CTYRAG 2 cut(s) 497, 813
SmoI CTYRAG 2 cut(s) 497, 813
SnaBI TACGTA 1 cut(s) 1366
SpeI ACTAGT 1 cut(s) 193
SphI GCATGC 3 cut(s) 289, 706, 710
Sse9I AATT 9 cut(s) 26, 326, 398, 610, 624, 654, 959, 1301, 1466
SsiI CCGC 9 cut(s) 99, 165, 279, 1530, 1545, 1561, 1563, 1625, 1740
SspI AATATT 1 cut(s) 484
SspMI CTAG 7 cut(s) 194, 390, 549, 1280, 1425, 1437, 1500
SstI GAGCTC 2 cut(s) 511, 1320
StyD4I CCNGG 1 cut(s) 1065
StyI CCWWGG 1 cut(s) 1279
TaaI ACNGT 4 cut(s) 265, 832, 1004, 1679
TaiI ACGT 3 cut(s) 276, 1368, 1606
TaqI TCGA 3 cut(s) 336, 866, 1780
TasI AATT 9 cut(s) 26, 326, 398, 610, 624, 654, 959, 1301, 1466
TauI GCSGC 4 cut(s) 101, 167, 282, 1628
TfiI GAWTC 3 cut(s) 170, 749, 1777
Tru1I TTAA 4 cut(s) 29, 453, 1463, 1659
Tru9I TTAA 4 cut(s) 29, 453, 1463, 1659
TscAI CASTG 3 cut(s) 808, 1134, 1603
TseFI GTSAC 1 cut(s) 1679
TseI GCWGC 9 cut(s) 14, 282, 488, 1271, 1274, 1454, 1472, 1485, 1584
Tsp45I GTSAC 1 cut(s) 1679
TspDTI ATGAA 8 cut(s) 87, 369, 659, 729, 914, 1355, 1395, 1704
TspGWI ACGGA 1 cut(s) 1601
TspRI CASTG 3 cut(s) 808, 1134, 1603
VneI GTGCAC 1 cut(s) 1224
VpaK11BI GGWCC 1 cut(s) 113
XagI CCTNNNNNAGG 1 cut(s) 1423
XapI RAATTY 3 cut(s) 326, 398, 654
XceI RCATGY 4 cut(s) 289, 706, 710, 887
XmaJI CCTAGG 1 cut(s) 1279
XmiI GTMKAC 1 cut(s) 969
XmnI GAANNNNTTC 1 cut(s) 1396
XspI CTAG 7 cut(s) 194, 390, 549, 1280, 1425, 1437, 1500
Zsp2I ATGCAT 2 cut(s) 708, 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.