Rh5CG149400

VWA / Hh protein intein-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000360
Physical Location & Seq
Forward (+)
13752070 .. 13754245
2176 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG149400.1

Sequence Viewer

Length: 1470 bp
ATGCAGGGCCAAAAGCTTCACCTTGTCAAGCAAGCTATCAAATTTGTCATAGAAAACATGGGGTCTTCAGATAGACTTTCTATAGTTTCATTCTCAACAAATTCTAGAAGAGTCCTTCCTCTTCGAAGAATGACCGTTGATGGCCGTGAAAGTGCAATTGAAGCTGTCGAATCTCTTGTAGCAGGTGGTGGAACTGACATTGCAGAAGGACTCAAAAAAGGAACACAAGTCCTTGAAGATCGGAGGCAAAGGAACCCAGTTGCTAGCATCATTCTCTTATCCGATGGCCAAGATAACTACTGTCGAAGCCCAAGCCAAATGTTGAAGAAATTGCCTGCTTCAATTCGTTCCAGCGACATGCAACATGAAATCCCTGTCCACACATTTGGGTTCGGCAACGACCATGATGCAAAGATTATGCATGCTATATCTGAGGAATCCCGGGGCACCTTTTCATACATTGAATCAGTTGGCATGATACAAGACGCCTTTGCTCTGTGCATTGGTGGTCTTCTCAGTGTTGTGGCTCAGGAACTTCGCCTCACAGTGAGGTCGGCATCACATGGAGCGAAGATTGTATCAATACCATCAGGGAGATATGTGAGTCAGATTTCTGATGACGGCTCGCAAGGTTTAGTTGATATTGGAAATATGTACGCAGAAGAGGTGAAACAATTTCTGGTGTATCTCTTAGTTCCACAATCCTCAGCTTCAGAGACTAAGACATCATTGGTGGACGTCTTATGCGTGTACAGAGATCTAGCTTCAAATGAGTTTATCCAGCTCCAAAGTGGGAGAGTAGAGATATCAAGACCACAGTTTTGTTCTCCTACAGAATTGGCAGTGTGTTTGGAGGTTGATCGCCAGCGGAACAGACTTTTGGTGGCTGATGCTATTGGAGAGGCTCAACGCTTGGCTGAAATGGGAAATTTGGAGGGTGCACGCGAAATTTTGACTCAACGAAGAGAAACTCTCTTAGCATCAGCAGCAGCCAAAGCTGGGGATAGTCTCAGTAATATGTTTGAAACTGAGCTTAAAGAAATCAGGGATAAAATGGCAAGTATGAAGTTGTACGAAGAGGCGGGGCGTGCTTATGCTCTGGCTGGAATGAGTTCACATTCACGCCAGAGGGCCTCTGCTAGGGGTAACGCAGAAGGCTCGTGCCTGGCCATGAAGGGTCGCAAACAACTTGCTACAAAAGCAGCGGGTCGTGCTTCCGGGGGTCGCGGTGTAGCAGTGACTCTTGCTGCCGGGGGTTTTGGTGGCAAGGGTGGTCCCAAAGGCAAACGCTCTGCAATGGATCACTTAGTGGCTGCTATGGGAGACTCTGATGAAGATGATGATATGGGCTTTGCTTTATGTGACGGAGGTTCATTTGACGGAGGCAATGATGTCCATCGAGGTGCTTTTGAAACACCAGCAATGGTAAGAATGGTACAGAAATCACAGCAGAAGAATCAATCTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA Vwaint zf-RING_11 zf-RING_2

Protein Analysis

489

Amino Acids

52.64

Weight (kDa)

7.63

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VWA PF00092 1 - 158 2.3e-19 von Willebrand factor type A domain
VWA_3 PF13768 4 - 151 1.2e-15 von Willebrand factor type A domain
VWA_2 PF13519 4 - 97 8.9e-14 von Willebrand factor type A domain
WAV3_C PF25243 286 - 352 7e-06 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Vwaint PF14624 341 - 383 6.8e-10 VWA / Hh protein intein-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000360)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g11691 FvH4_3g11693 FvH4_3g11740 FvH4_3g11750 FvH4_3g11770 FvH4_3g11771 FvH4_3g11772 FvH4_3g11780
malus_domestica MD10G1239000.v1.1
prunus_persica Prupe.4G105400_v2.0.a1
pyrus_communis pycom10g20000
rosa_chinensis RchiOBHm_Chr5g0018981 RchiOBHm_Chr5g0018991 RchiOBHm_Chr5g0019101 RchiOBHm_Chr5g0019111 RchiOBHm_Chr5g0019121 RchiOBHm_Chr5g0019151 RchiOBHm_Chr5g0019161 RchiOBHm_Chr5g0019171 RchiOBHm_Chr5g0019181 RchiOBHm_Chr5g0019201
rosa_laevigata RLG00000032411 RLG00000032418 RLG00000032419 RLG00000032420 RLG00000032421 RLG00000032423 RLG00000032424 RLG00000032426
rosa_multiflora Rmu_co8475613.1_g000001 Rmu_co8503587.1_g000001 Rmu_sc0000563.1_g000023 Rmu_sc0000563.1_g000027 Rmu_sc0002142.1_g000001 Rmu_sc0002142.1_g000003 Rmu_sc0002142.1_g000004 Rmu_sc0002142.1_g000011 Rmu_sc0002142.1_g000022 Rmu_sc0002561.1_g000002 Rmu_sc0042836.1_g000001
rosa_roxburghii Rroxscaffold_1G00058790 Rroxscaffold_1G00058810 Rroxscaffold_1G00058820 Rroxscaffold_1G00058840 Rroxscaffold_1G00058850 Rroxscaffold_1G00058860 Rroxscaffold_1G00058880 Rroxscaffold_1G00058910 Rroxscaffold_1G00074090 Rroxscaffold_1G00074110 Rroxscaffold_1G00074120 Rroxscaffold_1G00074130 Rroxscaffold_1G00074150
rosa_rugosa Rorug05G0046800 Rorug05G0047200 Rorug05G0047300 Rorug05G0047400 Rorug05G0047600 Rorug05G0047600 Rorug05G0047800 Rorug05G0047900 Rorug05G0048000 Rorug05G0048100 Rorug05G0048100 Rorug05G0048200 Rorug05G0048300
rosa_samantha Rh4DG102800 Rh5AG138700 Rh5AG138900 Rh5AG139000 Rh5AG139100 Rh5AG139200 Rh5AG139400 Rh5AG139500 Rh5AG139600 Rh5BG137400 Rh5BG137600 Rh5BG137800 Rh5BG138100 Rh5BG138200 Rh5BG138300 Rh5BG138500 Rh5CG148800 Rh5CG148900 Rh5CG149200 Rh5CG149300 Rh5CG149400 Rh5CG149600 Rh5CG149700 Rh5CG150000 Rh5DG138200 Rh5DG138300 Rh5DG138500 Rh5DG138600 Rh5DG138700 Rh5DG138900 Rh5DG139000 Rh5DG139200
rosa_wichuraiana Rw5G012290 Rw5G012330 Rw5G012340 Rw5G012350 Rw5G012370 Rw5G012380 Rw5G012390 Rw5G012410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 173
AatII GACGTC 1 cut(s) 741
Acc36I ACCTGC 1 cut(s) 173
AccB1I GGYRCC 1 cut(s) 446
AccII CGCG 2 cut(s) 945, 1227
AciI CCGC 4 cut(s) 868, 1082, 1205, 1227
AclWI GGATC 1 cut(s) 1308
AcoI YGGCCR 3 cut(s) 142, 286, 1167
AcsI RAATTY 4 cut(s) 41, 100, 928, 948
AcuI CTGAAG 2 cut(s) 51, 696
AcyI GRCGYC 2 cut(s) 486, 738
AdeI CACNNNGTG 1 cut(s) 1309
AfaI GTAC 4 cut(s) 656, 752, 1073, 1437
AfiI CCNNNNNNNGG 2 cut(s) 999, 1140
AgsI TTSAA 8 cut(s) 161, 236, 325, 342, 464, 768, 1025, 1412
AjnI CCWGG 1 cut(s) 1164
AjuI GAANNNNNNNTTGG 2 cut(s) 863, 895
AluBI AGCT 8 cut(s) 16, 35, 164, 710, 764, 784, 998, 1033
AluI AGCT 8 cut(s) 16, 35, 164, 710, 764, 784, 998, 1033
Alw21I GWGCWC 1 cut(s) 943
Alw26I GTCTC 3 cut(s) 710, 1013, 1317
Alw44I GTGCAC 1 cut(s) 939
AlwI GGATC 1 cut(s) 1308
Ama87I CYCGRG 1 cut(s) 441
AoxI GGCC 5 cut(s) 7, 142, 286, 1131, 1167
ApaLI GTGCAC 1 cut(s) 939
ApeKI GCWGC 5 cut(s) 986, 989, 1202, 1247, 1313
ApoI RAATTY 4 cut(s) 41, 100, 928, 948
ArsI GACNNNNNNTTYG 2 cut(s) 804, 836
Asp700I GAANNNNTTC 1 cut(s) 1111
AspS9I GGNCC 3 cut(s) 7, 1131, 1274
AsuC2I CCSGG 4 cut(s) 442, 443, 1219, 1252
AsuHPI GGTGA 2 cut(s) 11, 679
AsuII TTCGAA 1 cut(s) 124
AsuNHI GCTAGC 1 cut(s) 263
AvaI CYCGRG 1 cut(s) 441
AvaII GGWCC 1 cut(s) 1274
BaeGI GKGCMC 2 cut(s) 449, 943
BalI TGGCCA 2 cut(s) 288, 1169
BanI GGYRCC 1 cut(s) 446
BauI CACGAG 1 cut(s) 1159
BbsI GAAGAC 2 cut(s) 57, 503
Bbv12I GWGCWC 1 cut(s) 943
BbvCI CCTCAGC 1 cut(s) 706
BbvI GCAGC 5 cut(s) 998, 1001, 1214, 1234, 1300
BccI CCATC 4 cut(s) 134, 278, 595, 1404
BceAI ACGGC 2 cut(s) 129, 637
BcgI CGANNNNNNTGC 4 cut(s) 389, 423, 1140, 1174
BciT130I CCWGG 1 cut(s) 1166
BcnI CCSGG 4 cut(s) 442, 443, 1219, 1252
BcoDI GTCTC 3 cut(s) 710, 1013, 1317
BfaI CTAG 4 cut(s) 105, 264, 761, 1140
BfmI CTRYAG 2 cut(s) 81, 831
BfuAI ACCTGC 1 cut(s) 173
BglII AGATCT 1 cut(s) 757
BisI GCNGC 5 cut(s) 987, 990, 1203, 1248, 1314
BlsI GCNGC 5 cut(s) 988, 991, 1204, 1249, 1315
Bme1390I CCNGG 5 cut(s) 442, 443, 1166, 1219, 1252
Bme18I GGWCC 1 cut(s) 1274
BmeT110I CYCGRG 1 cut(s) 441
BmgT120I GGNCC 3 cut(s) 7, 1131, 1274
BmiI GGNNCC 3 cut(s) 254, 448, 1276
BmrFI CCNGG 5 cut(s) 442, 443, 1166, 1219, 1252
BmrI ACTGGG 1 cut(s) 251
BmsI GCATC 5 cut(s) 276, 397, 566, 880, 989
BmtI GCTAGC 1 cut(s) 267
BmuI ACTGGG 1 cut(s) 251
BpiI GAAGAC 2 cut(s) 57, 503
BplI GAGNNNNNCTC 2 cut(s) 957, 989
Bpu10I CCTNAGC 2 cut(s) 528, 706
Bpu14I TTCGAA 1 cut(s) 124
BpuMI CCSGG 4 cut(s) 442, 443, 1219, 1252
BsaBI GATNNNNATC 1 cut(s) 1395
BsaHI GRCGYC 2 cut(s) 486, 738
BsaJI CCNNGG 4 cut(s) 441, 442, 1218, 1251
Bsc4I CCNNNNNNNGG 2 cut(s) 999, 1140
Bse1I ACTGG 1 cut(s) 257
Bse3DI GCAATG 4 cut(s) 198, 1302, 1393, 1428
Bse8I GATNNNNATC 1 cut(s) 1395
BseBI CCWGG 1 cut(s) 1166
BseDI CCNNGG 4 cut(s) 441, 442, 1218, 1251
BseJI GATNNNNATC 1 cut(s) 1395
BseLI CCNNNNNNNGG 2 cut(s) 999, 1140
BseMI GCAATG 4 cut(s) 198, 1302, 1393, 1428
BseMII CTCAG 6 cut(s) 423, 529, 542, 720, 1020, 1024
BseNI ACTGG 1 cut(s) 257
BseSI GKGCMC 2 cut(s) 449, 943
BseXI GCAGC 5 cut(s) 998, 1001, 1214, 1234, 1300
BseYI CCCAGC 1 cut(s) 998
Bsh1236I CGCG 2 cut(s) 945, 1227
BshFI GGCC 5 cut(s) 9, 144, 288, 1133, 1169
BshNI GGYRCC 1 cut(s) 446
BsiHKAI GWGCWC 1 cut(s) 943
BsiHKCI CYCGRG 1 cut(s) 441
BsiSI CCGG 3 cut(s) 442, 1218, 1251
BslFI GGGAC 1 cut(s) 1260
BslI CCNNNNNNNGG 2 cut(s) 999, 1140
BsmAI GTCTC 3 cut(s) 710, 1013, 1317
BsmFI GGGAC 1 cut(s) 1260
BsnI GGCC 5 cut(s) 9, 144, 288, 1133, 1169
BsoBI CYCGRG 1 cut(s) 441
Bsp119I TTCGAA 1 cut(s) 124
Bsp1286I GDGCHC 2 cut(s) 449, 943
Bsp1407I TGTACA 1 cut(s) 750
Bsp143I GATC 4 cut(s) 238, 757, 859, 1300
BspACI CCGC 4 cut(s) 868, 1082, 1205, 1227
BspANI GGCC 5 cut(s) 9, 144, 288, 1133, 1169
BspCNI CTCAG 6 cut(s) 424, 528, 541, 719, 1021, 1023
BspFNI CGCG 2 cut(s) 945, 1227
BspLI GGNNCC 3 cut(s) 254, 448, 1276
BspMI ACCTGC 1 cut(s) 173
BspOI GCTAGC 1 cut(s) 267
BspPI GGATC 1 cut(s) 1308
BspT104I TTCGAA 1 cut(s) 124
BspT107I GGYRCC 1 cut(s) 446
BsrDI GCAATG 4 cut(s) 198, 1302, 1393, 1428
BsrGI TGTACA 1 cut(s) 750
BsrI ACTGG 1 cut(s) 257
BssECI CCNNGG 4 cut(s) 441, 442, 1218, 1251
BssMI GATC 4 cut(s) 238, 757, 859, 1300
BssNI GRCGYC 2 cut(s) 486, 738
BssSI CACGAG 1 cut(s) 1159
Bst2BI CACGAG 1 cut(s) 1159
Bst2UI CCWGG 1 cut(s) 1166
Bst4CI ACNGT 4 cut(s) 136, 302, 547, 819
Bst6I CTCTTC 5 cut(s) 103, 126, 657, 958, 1071
BstACI GRCGYC 2 cut(s) 486, 738
BstAUI TGTACA 1 cut(s) 750
BstBI TTCGAA 1 cut(s) 124
BstC8I GCNNGC 8 cut(s) 33, 265, 336, 423, 626, 866, 943, 1089
BstENI CCTNNNNNAGG 1 cut(s) 1138
BstFNI CGCG 2 cut(s) 945, 1227
BstKTI GATC 4 cut(s) 241, 760, 862, 1303
BstMAI GTCTC 3 cut(s) 710, 1013, 1317
BstMBI GATC 4 cut(s) 238, 757, 859, 1300
BstMWI GCNNNNNNNGC 6 cut(s) 161, 986, 995, 1088, 1199, 1211
BstNI CCWGG 1 cut(s) 1166
BstNSI RCATGY 2 cut(s) 361, 425
BstSCI CCNGG 5 cut(s) 440, 441, 1164, 1217, 1250
BstSFI CTRYAG 2 cut(s) 81, 831
BstSLI GKGCMC 2 cut(s) 449, 943
BstUI CGCG 2 cut(s) 945, 1227
BstV1I GCAGC 5 cut(s) 998, 1001, 1214, 1234, 1300
BstV2I GAAGAC 2 cut(s) 57, 503
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 1 cut(s) 386
BstYI RGATCY 1 cut(s) 757
BsuRI GGCC 5 cut(s) 9, 144, 288, 1133, 1169
BtsI GCAGTG 2 cut(s) 849, 1242
BtsIMutI CAGTG 4 cut(s) 523, 552, 849, 1242
BveI ACCTGC 1 cut(s) 173
Cac8I GCNNGC 8 cut(s) 33, 265, 336, 423, 626, 866, 943, 1089
Cfr13I GGNCC 3 cut(s) 7, 1131, 1274
Cfr9I CCCGGG 1 cut(s) 441
CseI GACGC 1 cut(s) 494
Csp6I GTAC 4 cut(s) 655, 751, 1072, 1436
CviAII CATG 8 cut(s) 58, 358, 365, 404, 422, 475, 563, 1171
CviQI GTAC 4 cut(s) 655, 751, 1072, 1436
DpnI GATC 4 cut(s) 240, 759, 861, 1302
DpnII GATC 4 cut(s) 238, 757, 859, 1300
DraIII CACNNNGTG 1 cut(s) 1309
EaeI YGGCCR 3 cut(s) 142, 286, 1167
Eam1104I CTCTTC 5 cut(s) 103, 126, 657, 958, 1071
EarI CTCTTC 5 cut(s) 103, 126, 657, 958, 1071
Eco32I GATATC 1 cut(s) 807
Eco47I GGWCC 1 cut(s) 1274
Eco57I CTGAAG 2 cut(s) 51, 696
Eco88I CYCGRG 1 cut(s) 441
EcoNI CCTNNNNNAGG 1 cut(s) 1138
EcoO109I RGGNCCY 1 cut(s) 1131
EcoRII CCWGG 1 cut(s) 1164
EcoRV GATATC 1 cut(s) 807
EcoT22I ATGCAT 1 cut(s) 423
FaeI CATG 8 cut(s) 61, 361, 368, 407, 425, 478, 566, 1174
FaqI GGGAC 1 cut(s) 1260
FatI CATG 8 cut(s) 57, 357, 364, 403, 421, 474, 562, 1170
FauI CCCGC 2 cut(s) 1075, 1198
Fnu4HI GCNGC 5 cut(s) 987, 990, 1203, 1248, 1314
Fsp4HI GCNGC 5 cut(s) 987, 990, 1203, 1248, 1314
FspBI CTAG 4 cut(s) 105, 264, 761, 1140
GluI GCNGC 5 cut(s) 987, 990, 1203, 1248, 1314
GsaI CCCAGC 1 cut(s) 1002
HaeIII GGCC 5 cut(s) 9, 144, 288, 1133, 1169
HapII CCGG 3 cut(s) 442, 1218, 1251
HgaI GACGC 1 cut(s) 494
Hin1I GRCGYC 2 cut(s) 486, 738
Hin1II CATG 8 cut(s) 61, 361, 368, 407, 425, 478, 566, 1174
HindIII AAGCTT 1 cut(s) 14
HpaII CCGG 3 cut(s) 442, 1218, 1251
HphI GGTGA 2 cut(s) 11, 679
Hpy166II GTNNAC 5 cut(s) 379, 736, 751, 941, 1115
Hpy188I TCNGA 8 cut(s) 70, 243, 283, 433, 609, 616, 715, 1330
Hpy188III TCNNGA 3 cut(s) 105, 530, 810
Hpy8I GTNNAC 5 cut(s) 379, 736, 751, 941, 1115
HpyAV CCTTC 4 cut(s) 125, 200, 1148, 1168
HpyCH4III ACNGT 4 cut(s) 136, 302, 547, 819
HpyCH4IV ACGT 1 cut(s) 738
HpyCH4V TGCA 9 cut(s) 4, 155, 203, 361, 410, 421, 501, 941, 1295
HpyF10VI GCNNNNNNNGC 6 cut(s) 161, 986, 995, 1088, 1199, 1211
HpySE526I ACGT 1 cut(s) 738
Hsp92I GRCGYC 2 cut(s) 486, 738
Hsp92II CATG 8 cut(s) 61, 361, 368, 407, 425, 478, 566, 1174
Kzo9I GATC 4 cut(s) 238, 757, 859, 1300
LmnI GCTCC 2 cut(s) 566, 789
Lsp1109I GCAGC 5 cut(s) 998, 1001, 1214, 1234, 1300
LweI GCATC 5 cut(s) 276, 397, 566, 880, 989
MaeI CTAG 4 cut(s) 105, 264, 761, 1140
MaeII ACGT 1 cut(s) 738
MaeIII GTNAC 3 cut(s) 1145, 1237, 1361
MalI GATC 4 cut(s) 240, 759, 861, 1302
MboI GATC 4 cut(s) 238, 757, 859, 1300
MfeI CAATTG 1 cut(s) 156
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 2 cut(s) 449, 943
MlsI TGGCCA 2 cut(s) 288, 1169
MluCI AATT 9 cut(s) 41, 100, 156, 329, 342, 674, 836, 928, 948
MluNI TGGCCA 2 cut(s) 288, 1169
MlyI GAGTC 6 cut(s) 120, 204, 613, 949, 1234, 1319
Mox20I TGGCCA 2 cut(s) 288, 1169
Mph1103I ATGCAT 1 cut(s) 423
MroXI GAANNNNTTC 1 cut(s) 1111
MscI TGGCCA 2 cut(s) 288, 1169
MseI TTAA 1 cut(s) 1035
MslI CAYNNNNRTG 1 cut(s) 1401
Msp20I TGGCCA 2 cut(s) 288, 1169
MspA1I CMGCKG 2 cut(s) 868, 1205
MspI CCGG 3 cut(s) 442, 1218, 1251
MspR9I CCNGG 5 cut(s) 442, 443, 1166, 1219, 1252
MunI CAATTG 1 cut(s) 156
MvaI CCWGG 1 cut(s) 1166
MvnI CGCG 2 cut(s) 945, 1227
MwoI GCNNNNNNNGC 6 cut(s) 161, 986, 995, 1088, 1199, 1211
NciI CCSGG 4 cut(s) 442, 443, 1219, 1252
NdeII GATC 4 cut(s) 238, 757, 859, 1300
NheI GCTAGC 1 cut(s) 263
NlaIII CATG 8 cut(s) 61, 361, 368, 407, 425, 478, 566, 1174
NlaIV GGNNCC 3 cut(s) 254, 448, 1276
NmuCI GTSAC 2 cut(s) 1237, 1361
NsiI ATGCAT 1 cut(s) 423
NspI RCATGY 2 cut(s) 361, 425
NspV TTCGAA 1 cut(s) 124
PaeI GCATGC 1 cut(s) 425
PaqCI CACCTGC 1 cut(s) 173
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PdmI GAANNNNTTC 1 cut(s) 1111
PfeI GAWTC 4 cut(s) 170, 437, 464, 1456
PkrI GCNGC 5 cut(s) 988, 991, 1204, 1249, 1315
PleI GAGTC 6 cut(s) 119, 204, 612, 949, 1234, 1319
PpsI GAGTC 6 cut(s) 119, 204, 612, 949, 1234, 1319
Psp6I CCWGG 1 cut(s) 1164
PspFI CCCAGC 1 cut(s) 998
PspGI CCWGG 1 cut(s) 1164
PspN4I GGNNCC 3 cut(s) 254, 448, 1276
PspPI GGNCC 3 cut(s) 7, 1131, 1274
PsuI RGATCY 1 cut(s) 757
RsaI GTAC 4 cut(s) 656, 752, 1073, 1437
RsaNI GTAC 4 cut(s) 655, 751, 1072, 1436
RseI CAYNNNNRTG 1 cut(s) 1401
SaqAI TTAA 1 cut(s) 1035
SatI GCNGC 5 cut(s) 987, 990, 1203, 1248, 1314
Sau3AI GATC 4 cut(s) 238, 757, 859, 1300
Sau96I GGNCC 3 cut(s) 7, 1131, 1274
SchI GAGTC 6 cut(s) 120, 204, 613, 949, 1234, 1319
ScrFI CCNGG 5 cut(s) 442, 443, 1166, 1219, 1252
SduI GDGCHC 2 cut(s) 449, 943
SfaNI GCATC 5 cut(s) 276, 397, 566, 880, 989
SfcI CTRYAG 2 cut(s) 81, 831
SfuI TTCGAA 1 cut(s) 124
SinI GGWCC 1 cut(s) 1274
SmaI CCCGGG 1 cut(s) 443
SmiMI CAYNNNNRTG 1 cut(s) 1401
SphI GCATGC 1 cut(s) 425
Sse9I AATT 9 cut(s) 41, 100, 156, 329, 342, 674, 836, 928, 948
SsiI CCGC 4 cut(s) 868, 1082, 1205, 1227
SspMI CTAG 4 cut(s) 105, 264, 761, 1140
StyD4I CCNGG 5 cut(s) 440, 441, 1164, 1217, 1250
TaaI ACNGT 4 cut(s) 136, 302, 547, 819
TaiI ACGT 1 cut(s) 741
TaqI TCGA 4 cut(s) 124, 168, 304, 1399
TasI AATT 9 cut(s) 41, 100, 156, 329, 342, 674, 836, 928, 948
TatI WGTACW 1 cut(s) 750
TfiI GAWTC 4 cut(s) 170, 437, 464, 1456
Tru1I TTAA 1 cut(s) 1035
Tru9I TTAA 1 cut(s) 1035
TscAI CASTG 4 cut(s) 523, 552, 849, 1242
TseFI GTSAC 2 cut(s) 1237, 1361
TseI GCWGC 5 cut(s) 986, 989, 1202, 1247, 1313
Tsp45I GTSAC 2 cut(s) 1237, 1361
TspDTI ATGAA 7 cut(s) 78, 381, 444, 1079, 1187, 1347, 1362
TspGWI ACGGA 2 cut(s) 1380, 1395
TspMI CCCGGG 1 cut(s) 441
TspRI CASTG 4 cut(s) 523, 552, 849, 1242
VneI GTGCAC 1 cut(s) 939
VpaK11BI GGWCC 1 cut(s) 1274
XagI CCTNNNNNAGG 1 cut(s) 1138
XapI RAATTY 4 cut(s) 41, 100, 928, 948
XbaI TCTAGA 1 cut(s) 104
XceI RCATGY 2 cut(s) 361, 425
XcmI CCANNNNNNNNNTGG 1 cut(s) 788
XmaI CCCGGG 1 cut(s) 441
XmnI GAANNNNTTC 1 cut(s) 1111
XspI CTAG 4 cut(s) 105, 264, 761, 1140
ZraI GACGTC 1 cut(s) 739
Zsp2I ATGCAT 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.