VWA domain containing CoxE-like protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 908 |
| Acc36I | ACCTGC | 1 cut(s) | 2057 |
| Acc65I | GGTACC | 1 cut(s) | 1985 |
| AccB1I | GGYRCC | 3 cut(s) | 449, 1985, 2655 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2880 |
| AccI | GTMKAC | 2 cut(s) | 316, 2592 |
| AccII | CGCG | 2 cut(s) | 1240, 2886 |
| AciI | CCGC | 1 cut(s) | 2226 |
| AclWI | GGATC | 8 cut(s) | 77, 703, 762, 2089, 2358, 2687, 2732, 2924 |
| AcoI | YGGCCR | 1 cut(s) | 436 |
| AcsI | RAATTY | 6 cut(s) | 150, 280, 815, 2213, 2344, 2757 |
| AcuI | CTGAAG | 7 cut(s) | 597, 723, 824, 1032, 1632, 2334, 2691 |
| AcyI | GRCGYC | 1 cut(s) | 2656 |
| AfaI | GTAC | 6 cut(s) | 407, 985, 1604, 1987, 2450, 2772 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 327, 1595, 2652, 2856, 2880 |
| AflIII | ACRYGT | 1 cut(s) | 532 |
| AhlI | ACTAGT | 1 cut(s) | 2014 |
| AjnI | CCWGG | 1 cut(s) | 2463 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2198, 2230 |
| Alw21I | GWGCWC | 3 cut(s) | 1447, 2022, 2944 |
| Alw26I | GTCTC | 2 cut(s) | 1001, 2308 |
| Alw44I | GTGCAC | 1 cut(s) | 2018 |
| AlwI | GGATC | 8 cut(s) | 77, 703, 762, 2089, 2358, 2687, 2732, 2924 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2951 |
| Ama87I | CYCGRG | 3 cut(s) | 770, 857, 1050 |
| AoxI | GGCC | 2 cut(s) | 436, 878 |
| ApaLI | GTGCAC | 1 cut(s) | 2018 |
| ApeKI | GCWGC | 7 cut(s) | 473, 897, 1699, 2329, 2409, 2908, 2951 |
| ApoI | RAATTY | 6 cut(s) | 150, 280, 815, 2213, 2344, 2757 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 266, 298, 2205, 2237, 2406, 2438, 2714, 2746 |
| AseI | ATTAAT | 1 cut(s) | 411 |
| Asp718I | GGTACC | 1 cut(s) | 1985 |
| AspLEI | GCGC | 3 cut(s) | 1240, 2658, 2886 |
| AspS9I | GGNCC | 2 cut(s) | 2722, 2859 |
| AsuC2I | CCSGG | 2 cut(s) | 771, 772 |
| AsuHPI | GGTGA | 7 cut(s) | 60, 220, 410, 667, 759, 1175, 1439 |
| AsuNHI | GCTAGC | 1 cut(s) | 2954 |
| AvaI | CYCGRG | 3 cut(s) | 770, 857, 1050 |
| AvaII | GGWCC | 2 cut(s) | 2722, 2859 |
| BaeGI | GKGCMC | 2 cut(s) | 802, 2022 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 48, 81, 1977, 2010 |
| BalI | TGGCCA | 1 cut(s) | 438 |
| BanI | GGYRCC | 3 cut(s) | 449, 1985, 2655 |
| BanII | GRGCYC | 3 cut(s) | 1447, 1544, 2119 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 279, 311 |
| BauI | CACGAG | 1 cut(s) | 1116 |
| BbsI | GAAGAC | 2 cut(s) | 25, 2322 |
| Bbv12I | GWGCWC | 3 cut(s) | 1447, 2022, 2944 |
| BbvCI | CCTCAGC | 1 cut(s) | 1149 |
| BbvI | GCAGC | 7 cut(s) | 485, 884, 1711, 2316, 2396, 2920, 2938 |
| BceAI | ACGGC | 2 cut(s) | 2227, 2669 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2876, 2886, 2910, 2920 |
| BciT130I | CCWGG | 1 cut(s) | 2465 |
| BciVI | GTATCC | 1 cut(s) | 238 |
| BclI | TGATCA | 1 cut(s) | 822 |
| BcnI | CCSGG | 2 cut(s) | 771, 772 |
| BcoDI | GTCTC | 2 cut(s) | 1001, 2308 |
| BcuI | ACTAGT | 1 cut(s) | 2014 |
| BfaI | CTAG | 5 cut(s) | 918, 1037, 2015, 2937, 2955 |
| BfmI | CTRYAG | 6 cut(s) | 48, 325, 722, 934, 1200, 1697 |
| BfoI | RGCGCY | 1 cut(s) | 2659 |
| BfuAI | ACCTGC | 1 cut(s) | 2057 |
| BfuI | GTATCC | 1 cut(s) | 238 |
| BisI | GCNGC | 7 cut(s) | 474, 898, 1700, 2330, 2410, 2909, 2952 |
| BlpI | GCTNAGC | 1 cut(s) | 1278 |
| BlsI | GCNGC | 7 cut(s) | 475, 899, 1701, 2331, 2411, 2910, 2953 |
| BmcAI | AGTACT | 1 cut(s) | 1604 |
| Bme1390I | CCNGG | 3 cut(s) | 771, 772, 2465 |
| Bme18I | GGWCC | 2 cut(s) | 2722, 2859 |
| BmeT110I | CYCGRG | 3 cut(s) | 770, 857, 1050 |
| BmgT120I | GGNCC | 2 cut(s) | 2722, 2859 |
| BmiI | GGNNCC | 5 cut(s) | 451, 1987, 2116, 2657, 2685 |
| BmrFI | CCNGG | 3 cut(s) | 771, 772, 2465 |
| BmsI | GCATC | 7 cut(s) | 716, 979, 1135, 1264, 2053, 2146, 2601 |
| BmtI | GCTAGC | 1 cut(s) | 2958 |
| BpiI | GAAGAC | 2 cut(s) | 25, 2322 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1610, 1642, 2771, 2803 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1149 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1278 |
| BpuEI | CTTGAG | 3 cut(s) | 320, 407, 1144 |
| BpuMI | CCSGG | 2 cut(s) | 771, 772 |
| BsaAI | YACGTR | 2 cut(s) | 80, 533 |
| BsaHI | GRCGYC | 1 cut(s) | 2656 |
| BsaJI | CCNNGG | 6 cut(s) | 195, 770, 875, 1209, 2855, 2862 |
| BsaWI | WCCGGW | 1 cut(s) | 928 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1337, 1367, 2085, 2115 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 327, 1595, 2652, 2856, 2880 |
| Bse1I | ACTGG | 5 cut(s) | 1610, 2300, 2659, 2891, 2945 |
| Bse3DI | GCAATG | 1 cut(s) | 2024 |
| BseBI | CCWGG | 1 cut(s) | 2465 |
| BseDI | CCNNGG | 6 cut(s) | 195, 770, 875, 1209, 2855, 2862 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 327, 1595, 2652, 2856, 2880 |
| BseMI | GCAATG | 1 cut(s) | 2024 |
| BseMII | CTCAG | 6 cut(s) | 633, 993, 1140, 1292, 2606, 2804 |
| BseNI | ACTGG | 5 cut(s) | 1610, 2300, 2659, 2891, 2945 |
| BseSI | GKGCMC | 2 cut(s) | 802, 2022 |
| BseXI | GCAGC | 7 cut(s) | 485, 884, 1711, 2316, 2396, 2920, 2938 |
| BseYI | CCCAGC | 3 cut(s) | 1309, 2110, 2959 |
| BsgI | GTGCAG | 1 cut(s) | 366 |
| Bsh1236I | CGCG | 2 cut(s) | 1240, 2886 |
| BshFI | GGCC | 2 cut(s) | 438, 880 |
| BshNI | GGYRCC | 3 cut(s) | 449, 1985, 2655 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1447, 2022, 2944 |
| BsiHKCI | CYCGRG | 3 cut(s) | 770, 857, 1050 |
| BsiSI | CCGG | 3 cut(s) | 771, 929, 1937 |
| BslFI | GGGAC | 1 cut(s) | 538 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 327, 1595, 2652, 2856, 2880 |
| BsmAI | GTCTC | 2 cut(s) | 1001, 2308 |
| BsmFI | GGGAC | 1 cut(s) | 538 |
| BsmI | GAATGC | 1 cut(s) | 1228 |
| BsnI | GGCC | 2 cut(s) | 438, 880 |
| BsoBI | CYCGRG | 3 cut(s) | 770, 857, 1050 |
| Bsp1286I | GDGCHC | 6 cut(s) | 802, 1447, 1544, 2022, 2119, 2944 |
| Bsp1407I | TGTACA | 2 cut(s) | 2448, 2770 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1278 |
| BspACI | CCGC | 1 cut(s) | 2226 |
| BspANI | GGCC | 2 cut(s) | 438, 880 |
| BspCNI | CTCAG | 6 cut(s) | 632, 992, 1141, 1291, 2607, 2803 |
| BspFNI | CGCG | 2 cut(s) | 1240, 2886 |
| BspHI | TCATGA | 1 cut(s) | 1318 |
| BspLI | GGNNCC | 5 cut(s) | 451, 1987, 2116, 2657, 2685 |
| BspMAI | CTGCAG | 3 cut(s) | 726, 938, 1701 |
| BspMI | ACCTGC | 1 cut(s) | 2057 |
| BspOI | GCTAGC | 1 cut(s) | 2958 |
| BspPI | GGATC | 8 cut(s) | 77, 703, 762, 2089, 2358, 2687, 2732, 2924 |
| BspT107I | GGYRCC | 3 cut(s) | 449, 1985, 2655 |
| BsrDI | GCAATG | 1 cut(s) | 2024 |
| BsrGI | TGTACA | 2 cut(s) | 2448, 2770 |
| BsrI | ACTGG | 5 cut(s) | 1610, 2300, 2659, 2891, 2945 |
| BssECI | CCNNGG | 6 cut(s) | 195, 770, 875, 1209, 2855, 2862 |
| BssNI | GRCGYC | 1 cut(s) | 2656 |
| BssSI | CACGAG | 1 cut(s) | 1116 |
| BssT1I | CCWWGG | 5 cut(s) | 195, 875, 1209, 2855, 2862 |
| Bst2BI | CACGAG | 1 cut(s) | 1116 |
| Bst2UI | CCWGG | 1 cut(s) | 2465 |
| Bst6I | CTCTTC | 2 cut(s) | 483, 2747 |
| BstACI | GRCGYC | 1 cut(s) | 2656 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2026 |
| BstAUI | TGTACA | 2 cut(s) | 2448, 2770 |
| BstBAI | YACGTR | 2 cut(s) | 80, 533 |
| BstC8I | GCNNGC | 6 cut(s) | 902, 1018, 1113, 2022, 2363, 2956 |
| BstDEI | CTNAG | 9 cut(s) | 619, 979, 1149, 1278, 1504, 1887, 2377, 2615, 2790 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 325 |
| BstFNI | CGCG | 2 cut(s) | 1240, 2886 |
| BstH2I | RGCGCY | 1 cut(s) | 2659 |
| BstHHI | GCGC | 3 cut(s) | 1240, 2658, 2886 |
| BstMAI | GTCTC | 2 cut(s) | 1001, 2308 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 36, 1968, 2026, 2362, 2382, 2851, 2948, 2960 |
| BstNI | CCWGG | 1 cut(s) | 2465 |
| BstNSI | RCATGY | 2 cut(s) | 2336, 2932 |
| BstSCI | CCNGG | 3 cut(s) | 769, 770, 2463 |
| BstSFI | CTRYAG | 6 cut(s) | 48, 325, 722, 934, 1200, 1697 |
| BstSLI | GKGCMC | 2 cut(s) | 802, 2022 |
| BstUI | CGCG | 2 cut(s) | 1240, 2886 |
| BstV1I | GCAGC | 7 cut(s) | 485, 884, 1711, 2316, 2396, 2920, 2938 |
| BstV2I | GAAGAC | 2 cut(s) | 25, 2322 |
| BstX2I | RGATCY | 2 cut(s) | 754, 2350 |
| BstYI | RGATCY | 2 cut(s) | 754, 2350 |
| BsuI | GTATCC | 1 cut(s) | 238 |
| BsuRI | GGCC | 2 cut(s) | 438, 880 |
| BtsI | GCAGTG | 3 cut(s) | 943, 1289, 2306 |
| BtsIMutI | CAGTG | 7 cut(s) | 468, 489, 800, 943, 1289, 2306, 2504 |
| BveI | ACCTGC | 1 cut(s) | 2057 |
| Cac8I | GCNNGC | 6 cut(s) | 902, 1018, 1113, 2022, 2363, 2956 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2951 |
| CciI | TCATGA | 1 cut(s) | 1318 |
| CfoI | GCGC | 3 cut(s) | 1240, 2658, 2886 |
| Cfr13I | GGNCC | 2 cut(s) | 2722, 2859 |
| Cfr9I | CCCGGG | 1 cut(s) | 770 |
| CseI | GACGC | 2 cut(s) | 19, 1229 |
| Csp6I | GTAC | 6 cut(s) | 406, 984, 1603, 1986, 2449, 2771 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 444, 465, 479, 500, 2655, 2690, 2730, 2765 |
| CviAII | CATG | 9 cut(s) | 1069, 1219, 1319, 1516, 1724, 2333, 2443, 2623, 2929 |
| CviQI | GTAC | 6 cut(s) | 406, 984, 1603, 1986, 2449, 2771 |
| DdeI | CTNAG | 9 cut(s) | 619, 979, 1149, 1278, 1504, 1887, 2377, 2615, 2790 |
| DinI | GGCGCC | 1 cut(s) | 2657 |
| DraI | TTTAAA | 2 cut(s) | 222, 1648 |
| EaeI | YGGCCR | 1 cut(s) | 436 |
| Eam1104I | CTCTTC | 2 cut(s) | 483, 2747 |
| EarI | CTCTTC | 2 cut(s) | 483, 2747 |
| Ecl136II | GAGCTC | 1 cut(s) | 1445 |
| Eco130I | CCWWGG | 5 cut(s) | 195, 875, 1209, 2855, 2862 |
| Eco24I | GRGCYC | 3 cut(s) | 1447, 1544, 2119 |
| Eco47I | GGWCC | 2 cut(s) | 2722, 2859 |
| Eco53kI | GAGCTC | 1 cut(s) | 1445 |
| Eco57I | CTGAAG | 7 cut(s) | 597, 723, 824, 1032, 1632, 2334, 2691 |
| Eco88I | CYCGRG | 3 cut(s) | 770, 857, 1050 |
| EcoICRI | GAGCTC | 1 cut(s) | 1445 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 325 |
| EcoRII | CCWGG | 1 cut(s) | 2463 |
| EcoT14I | CCWWGG | 5 cut(s) | 195, 875, 1209, 2855, 2862 |
| EcoT38I | GRGCYC | 3 cut(s) | 1447, 1544, 2119 |
| EgeI | GGCGCC | 1 cut(s) | 2657 |
| EheI | GGCGCC | 1 cut(s) | 2657 |
| ErhI | CCWWGG | 5 cut(s) | 195, 875, 1209, 2855, 2862 |
| FaeI | CATG | 9 cut(s) | 1072, 1222, 1322, 1519, 1727, 2336, 2446, 2626, 2932 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 114, 146, 741, 773 |
| FaqI | GGGAC | 1 cut(s) | 538 |
| FatI | CATG | 9 cut(s) | 1068, 1218, 1318, 1515, 1723, 2332, 2442, 2622, 2928 |
| FauNDI | CATATG | 1 cut(s) | 2689 |
| FbaI | TGATCA | 1 cut(s) | 822 |
| FblI | GTMKAC | 2 cut(s) | 316, 2592 |
| Fnu4HI | GCNGC | 7 cut(s) | 474, 898, 1700, 2330, 2410, 2909, 2952 |
| FriOI | GRGCYC | 3 cut(s) | 1447, 1544, 2119 |
| Fsp4HI | GCNGC | 7 cut(s) | 474, 898, 1700, 2330, 2410, 2909, 2952 |
| FspBI | CTAG | 5 cut(s) | 918, 1037, 2015, 2937, 2955 |
| GlaI | GCGC | 3 cut(s) | 1239, 2657, 2885 |
| GluI | GCNGC | 7 cut(s) | 474, 898, 1700, 2330, 2410, 2909, 2952 |
| GsaI | CCCAGC | 3 cut(s) | 1313, 2114, 2963 |
| HaeII | RGCGCY | 1 cut(s) | 2659 |
| HaeIII | GGCC | 2 cut(s) | 438, 880 |
| HapII | CCGG | 3 cut(s) | 771, 929, 1937 |
| HgaI | GACGC | 2 cut(s) | 19, 1229 |
| HhaI | GCGC | 3 cut(s) | 1240, 2658, 2886 |
| Hin1I | GRCGYC | 1 cut(s) | 2656 |
| Hin1II | CATG | 9 cut(s) | 1072, 1222, 1322, 1519, 1727, 2336, 2446, 2626, 2932 |
| Hin6I | GCGC | 3 cut(s) | 1238, 2656, 2884 |
| HinP1I | GCGC | 3 cut(s) | 1238, 2656, 2884 |
| HincII | GTYRAC | 2 cut(s) | 378, 1881 |
| HindII | GTYRAC | 2 cut(s) | 378, 1881 |
| HindIII | AAGCTT | 3 cut(s) | 902, 1176, 1574 |
| HpaII | CCGG | 3 cut(s) | 771, 929, 1937 |
| HphI | GGTGA | 7 cut(s) | 60, 220, 410, 667, 759, 1175, 1439 |
| Hpy166II | GTNNAC | 8 cut(s) | 77, 317, 378, 843, 1881, 2020, 2449, 2593 |
| Hpy8I | GTNNAC | 8 cut(s) | 77, 317, 378, 843, 1881, 2020, 2449, 2593 |
| Hpy99I | CGWCG | 2 cut(s) | 1145, 2655 |
| HpyCH4IV | ACGT | 4 cut(s) | 79, 532, 1081, 2032 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 36, 1968, 2026, 2362, 2382, 2851, 2948, 2960 |
| HpyF3I | CTNAG | 9 cut(s) | 619, 979, 1149, 1278, 1504, 1887, 2377, 2615, 2790 |
| HpySE526I | ACGT | 4 cut(s) | 79, 532, 1081, 2032 |
| Hsp92I | GRCGYC | 1 cut(s) | 2656 |
| Hsp92II | CATG | 9 cut(s) | 1072, 1222, 1322, 1519, 1727, 2336, 2446, 2626, 2932 |
| HspAI | GCGC | 3 cut(s) | 1238, 2656, 2884 |
| KasI | GGCGCC | 1 cut(s) | 2655 |
| KpnI | GGTACC | 1 cut(s) | 1989 |
| Ksp22I | TGATCA | 1 cut(s) | 822 |
| LmnI | GCTCC | 6 cut(s) | 1442, 2093, 2107, 2114, 2326, 2683 |
| Lsp1109I | GCAGC | 7 cut(s) | 485, 884, 1711, 2316, 2396, 2920, 2938 |
| LweI | GCATC | 7 cut(s) | 716, 979, 1135, 1264, 2053, 2146, 2601 |
| MaeI | CTAG | 5 cut(s) | 918, 1037, 2015, 2937, 2955 |
| MaeII | ACGT | 4 cut(s) | 79, 532, 1081, 2032 |
| MaeIII | GTNAC | 9 cut(s) | 55, 330, 505, 673, 744, 938, 2244, 2276, 2783 |
| MfeI | CAATTG | 1 cut(s) | 864 |
| MflI | RGATCY | 2 cut(s) | 754, 2350 |
| MhlI | GDGCHC | 6 cut(s) | 802, 1447, 1544, 2022, 2119, 2944 |
| MlsI | TGGCCA | 1 cut(s) | 438 |
| MluNI | TGGCCA | 1 cut(s) | 438 |
| Mly113I | GGCGCC | 1 cut(s) | 2656 |
| MlyI | GAGTC | 3 cut(s) | 269, 431, 528 |
| MmeI | TCCRAC | 1 cut(s) | 2674 |
| Mox20I | TGGCCA | 1 cut(s) | 438 |
| MscI | TGGCCA | 1 cut(s) | 438 |
| MslI | CAYNNNNRTG | 5 cut(s) | 413, 1493, 1722, 2285, 2441 |
| Msp20I | TGGCCA | 1 cut(s) | 438 |
| MspA1I | CMGCKG | 1 cut(s) | 1313 |
| MspI | CCGG | 3 cut(s) | 771, 929, 1937 |
| MspR9I | CCNGG | 3 cut(s) | 771, 772, 2465 |
| MunI | CAATTG | 1 cut(s) | 864 |
| Mva1269I | GAATGC | 1 cut(s) | 1228 |
| MvaI | CCWGG | 1 cut(s) | 2465 |
| MvnI | CGCG | 2 cut(s) | 1240, 2886 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 36, 1968, 2026, 2362, 2382, 2851, 2948, 2960 |
| NarI | GGCGCC | 1 cut(s) | 2656 |
| NciI | CCSGG | 2 cut(s) | 771, 772 |
| NdeI | CATATG | 1 cut(s) | 2689 |
| NheI | GCTAGC | 1 cut(s) | 2954 |
| NlaIII | CATG | 9 cut(s) | 1072, 1222, 1322, 1519, 1727, 2336, 2446, 2626, 2932 |
| NlaIV | GGNNCC | 5 cut(s) | 451, 1987, 2116, 2657, 2685 |
| NmeAIII | GCCGAG | 1 cut(s) | 763 |
| NmuCI | GTSAC | 3 cut(s) | 330, 673, 938 |
| NspI | RCATGY | 2 cut(s) | 2336, 2932 |
| PaeR7I | CTCGAG | 2 cut(s) | 857, 1050 |
| PagI | TCATGA | 1 cut(s) | 1318 |
| PctI | GAATGC | 1 cut(s) | 1228 |
| PfeI | GAWTC | 7 cut(s) | 871, 1130, 1196, 2191, 2534, 2619, 2903 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2880 |
| PkrI | GCNGC | 7 cut(s) | 475, 899, 1701, 2331, 2411, 2910, 2953 |
| PleI | GAGTC | 3 cut(s) | 269, 430, 527 |
| PluTI | GGCGCC | 1 cut(s) | 2659 |
| PpsI | GAGTC | 3 cut(s) | 269, 430, 527 |
| Ppu21I | YACGTR | 2 cut(s) | 80, 533 |
| PshBI | ATTAAT | 1 cut(s) | 411 |
| PsiI | TTATAA | 1 cut(s) | 908 |
| Psp124BI | GAGCTC | 1 cut(s) | 1447 |
| Psp6I | CCWGG | 1 cut(s) | 2463 |
| PspFI | CCCAGC | 3 cut(s) | 1309, 2110, 2959 |
| PspGI | CCWGG | 1 cut(s) | 2463 |
| PspN4I | GGNNCC | 5 cut(s) | 451, 1987, 2116, 2657, 2685 |
| PspPI | GGNCC | 2 cut(s) | 2722, 2859 |
| PspXI | VCTCGAGB | 1 cut(s) | 1050 |
| PstI | CTGCAG | 3 cut(s) | 726, 938, 1701 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2951 |
| PsuI | RGATCY | 2 cut(s) | 754, 2350 |
| PvuII | CAGCTG | 1 cut(s) | 1313 |
| RsaI | GTAC | 6 cut(s) | 407, 985, 1604, 1987, 2450, 2772 |
| RsaNI | GTAC | 6 cut(s) | 406, 984, 1603, 1986, 2449, 2771 |
| RseI | CAYNNNNRTG | 5 cut(s) | 413, 1493, 1722, 2285, 2441 |
| SacI | GAGCTC | 1 cut(s) | 1447 |
| SatI | GCNGC | 7 cut(s) | 474, 898, 1700, 2330, 2410, 2909, 2952 |
| Sau96I | GGNCC | 2 cut(s) | 2722, 2859 |
| ScaI | AGTACT | 1 cut(s) | 1604 |
| SchI | GAGTC | 3 cut(s) | 269, 431, 528 |
| ScrFI | CCNGG | 3 cut(s) | 771, 772, 2465 |
| SduI | GDGCHC | 6 cut(s) | 802, 1447, 1544, 2022, 2119, 2944 |
| SfaNI | GCATC | 7 cut(s) | 716, 979, 1135, 1264, 2053, 2146, 2601 |
| SfcI | CTRYAG | 6 cut(s) | 48, 325, 722, 934, 1200, 1697 |
| SfoI | GGCGCC | 1 cut(s) | 2657 |
| Sfr274I | CTCGAG | 2 cut(s) | 857, 1050 |
| SinI | GGWCC | 2 cut(s) | 2722, 2859 |
| SlaI | CTCGAG | 2 cut(s) | 857, 1050 |
| SmaI | CCCGGG | 1 cut(s) | 772 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 413, 1493, 1722, 2285, 2441 |
| SmlI | CTYRAG | 5 cut(s) | 299, 386, 857, 1050, 1123 |
| SmoI | CTYRAG | 5 cut(s) | 299, 386, 857, 1050, 1123 |
| SpeI | ACTAGT | 1 cut(s) | 2014 |
| SsiI | CCGC | 1 cut(s) | 2226 |
| SspDI | GGCGCC | 1 cut(s) | 2655 |
| SspMI | CTAG | 5 cut(s) | 918, 1037, 2015, 2937, 2955 |
| SstI | GAGCTC | 1 cut(s) | 1447 |
| StyD4I | CCNGG | 3 cut(s) | 769, 770, 2463 |
| StyI | CCWWGG | 5 cut(s) | 195, 875, 1209, 2855, 2862 |
| TaiI | ACGT | 4 cut(s) | 82, 535, 1084, 2035 |
| TaqI | TCGA | 7 cut(s) | 858, 1005, 1051, 1398, 1455, 1657, 2004 |
| TaqII | GACCGA | 1 cut(s) | 1154 |
| TatI | WGTACW | 4 cut(s) | 405, 1602, 2448, 2770 |
| TfiI | GAWTC | 7 cut(s) | 871, 1130, 1196, 2191, 2534, 2619, 2903 |
| TscAI | CASTG | 7 cut(s) | 468, 489, 807, 943, 1289, 2313, 2511 |
| TseFI | GTSAC | 3 cut(s) | 330, 673, 938 |
| TseI | GCWGC | 7 cut(s) | 473, 897, 1699, 2329, 2409, 2908, 2951 |
| Tsp45I | GTSAC | 3 cut(s) | 330, 673, 938 |
| TspDTI | ATGAA | 9 cut(s) | 1092, 1235, 1421, 1961, 2257, 2531, 2551, 2611, 2696 |
| TspGWI | ACGGA | 1 cut(s) | 531 |
| TspMI | CCCGGG | 1 cut(s) | 770 |
| TspRI | CASTG | 7 cut(s) | 468, 489, 807, 943, 1289, 2313, 2511 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2880 |
| VneI | GTGCAC | 1 cut(s) | 2018 |
| VpaK11BI | GGWCC | 2 cut(s) | 2722, 2859 |
| VspI | ATTAAT | 1 cut(s) | 411 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 325 |
| XapI | RAATTY | 6 cut(s) | 150, 280, 815, 2213, 2344, 2757 |
| XbaI | TCTAGA | 2 cut(s) | 917, 2936 |
| XceI | RCATGY | 2 cut(s) | 2336, 2932 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 202, 460 |
| XhoI | CTCGAG | 2 cut(s) | 857, 1050 |
| XmaI | CCCGGG | 1 cut(s) | 770 |
| XmiI | GTMKAC | 2 cut(s) | 316, 2592 |
| XspI | CTAG | 5 cut(s) | 918, 1037, 2015, 2937, 2955 |
| ZrmI | AGTACT | 1 cut(s) | 1604 |