FvH4_3g20350

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000420
Physical Location & Seq
Reverse (-)
13407263 .. 13410013
2751 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g20350.t1

Sequence Viewer

Length: 2625 bp
ATGGCCATTTTCATCAAACTTTTCATATTCATCTTTGTTTTTGTCACACGTTCGTTAAACACCGTTTCCTTCTCTACTTCAGCTGCTCAAGTATATTTTGCTGATCATTGTGCTTCAATTGCTCCCCACTACTCAACACCACACAGATATGCTGGAGTTAACTCCACTGTTCATCGCCTTACAGGTTTCTACGACACTGCTGATCAGAACTCCACATATGGTGATGTTACTGATGGCCAGAATTCAATTGTACTCCGCTTCCGGTACGATGGAGCAGCTGATGAACAAGGCCTGTACATGGTCCAAGGAACTCTTCAATTTCCAAGTGACGGTACACATTTCCTTGTTGGAAACTTTACAAGTAGTTGGCAATCCACTTACTCGAGAGTTCCATATGGACAGCGTCCGAGAAGCTTTAGGCTAAATGGGGTCTGGTCAGAATCTTCTGGGGAGCTTTGTATGGTTGGATCAGCTTCCAACTACTCAGACCAAGGTAATTTACTGACCTTTCCTATAGTTCTTAAGCTACATAAACTCAAGAGGTCAAGTAGTCTTACTAGTTTAATCAGTGGCACCTTAGAGAGCTTGGCAAGTTCCAAGAATGAACCAAATTATGTTGGACCAATTTCTATGTCAATGCTTCCTTCTATGAACTACCAGTACACTGTAGTTTCAAACAAATCTCATAACAGCTATCCAGATGAAAGTGATGATGTTTCCCCAAATTCTTTAAAAATTGGGAGATTTTGCAGTGTATTCTCAAGAGCAGTACTAATCCGTGAATTTCAACTGAGATATTCTAGCCATTGTGGTTCTGCAAAAAACTGCTCTCCTCTTGCTGTGTCTGATTTGCCTCACGTCATGTCATTGAAGAATATTGAGTGTTTGGAAGATAGAAAATGGTTACGACTTCTGGTAGACTTCACAGGCAGTAGCATCAATAACCAAAGGCCTTTTGATCCAAGTACAACGTTGGTTGGGGAAGGTTTATGGGATTCAAGGAAAAATCAGCTACATGTTGTTGCCTGTCGATTCTTGAATGCAAGGAATTCTTTGAGTCCTACTCATGTGGGTGATTGTTCAACAAGATTGACCTTGAGCTTTCCTGCAATTTGGACAATTGGAAATACTAGCTGCATTGTGGGGGAAATTTGGAGCAACAAATCCACGACAGAGTCAGGTTACTTCAAAAACATCACATTTGACAGTGGTGGCGGTGATACATCTGTATTTCAAGGCCAAAGGTATGAGTATACCAAAATAGATGAAGCAACAAAGTTGTGCTCAAGAAAGAAGCCTGATGCTGATGACAAGAACAAGATTTATCCAAGTCCTTTTTCTTATGAAATGAGATTAGATATATCAACTAACAGTTCTACAGGAGAAGTTGGATGGGGCTATATGATCCCTTTCTCTGTTGATAACCAATTCATCCAACCCTATTGGTACTCGATGGAAGATGGAACCGAAAAATACCTTGGAGCTCCTGTGAGTGCTCCTGTGGACCATAGATACAACAGCAACCGGTACAACATCAGCTACAGAATAAACATCAAAGCAATAGGTGAGGTTAGATCGCGCAGTCAATTGTACCAACCTAATTCATTATATGAGATGGGGATTTTTGCTGAAGGGATATATGATGACAGAGATGGAAACCTGTGCATGGTAGGTTGCCGATCTTTGAGCTCAAACAGTCACAGTGAGCCATCATATGATTCTGCAGACTGCGAGATTGTTGTCAATATCCAGTTTCCTCCAACAAATCCAAAGACTACCTATTCAAGTTTTGTCAAGGGAAGCATCGAAAGCACACGAGAACCGTCTGATCCTCTTTATTTTGAGCGATTGTATTTGACCTCAGCTGCTGGTGATATTGTTGAAGCAAGCCAATCCATTTGGAGGATGGATGTGGAGATCATATTGATTGTCATATCCAACACATTTGCATGTGTTTTTGGGGCATTACAACTCTTTCATGTTAAAAGGCATCCGGATGTGCTCCCATCCATTTCTATCTTGATGCTTTTTATTCTTGCTCTAGGCTACATGATACCCCTTATGCTGAACTTTGATGCCATGTTCACTCGACACAGTAGCCCAACTGTTTTCCTTGGAAGGGGATGGCTTGAGCTCAATGAAGTGATTGTAAGAGTAGTAACAATGGTAGGGTGCTTGGTTGGTTTGTTTCTGATGAATTGGGGGAGGGTTGATACTACTGTGATGGTTTCAAGTGGTCAAGAACATCAAATGGTTGGAACTATTCTGGGATCTTGTGGTGGTTTGGTCCTGGATGCATTTTTGTTCCCTCAAATTCTGCTCAACATGTTCTCCAAATCAATAGAAAAGGTATTGTCAGATTCGTTCTACATTGGAACAACTCTTGTTCGTGTGCTGCCACATGCATATGATCTGTACAGGGCACATACCTCTGCTCACCAATTGGAAGAATCATATATTTATGCAAGCCCTGCAGCAGACTTTTACTCTACTGCTTGGAATGTCATTATTCCTTGTGGATGTATACTTTTTGCTGTGATCATTTACTTGCAGCAGCGCTTTGGTGGTCCCTGCATTCTTCCTAAAAAATACGAGCAGGTCCCGATTGCCAGTGAAGCATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

875

Amino Acids

97.61

Weight (kDa)

6.15

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 82 - 210 1.5e-16 DUF2921 lipocalin-like domain
DUF2921_N PF25333 235 - 399 7.1e-29 DUF2921 lipocalin-like domain
DUF2921_N PF25333 425 - 617 1.3e-36 DUF2921 lipocalin-like domain
DUF2921 PF11145 629 - 721 3.1e-18 Transmembrane E3 ligase/DUF2921 transmembrane domain
DUF2921 PF11145 711 - 863 1.3e-28 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2587
AccB1I GGYRCC 1 cut(s) 572
AccI GTMKAC 3 cut(s) 918, 1253, 2524
AccII CGCG 1 cut(s) 1579
AccIII TCCGGA 1 cut(s) 1993
AciI CCGC 2 cut(s) 256, 1215
AclI AACGTT 1 cut(s) 971
AclWI GGATC 5 cut(s) 475, 953, 1399, 1823, 2278
AcoI YGGCCR 2 cut(s) 3, 235
AcsI RAATTY 6 cut(s) 241, 724, 782, 1048, 1149, 2313
AcuI CTGAAG 2 cut(s) 63, 1650
AfeI AGCGCT 1 cut(s) 2558
AfiI CCNNNNNNNGG 5 cut(s) 298, 329, 1666, 1902, 2119
AflII CTTAAG 1 cut(s) 521
AflIII ACRYGT 3 cut(s) 47, 1015, 2325
AgeI ACCGGT 1 cut(s) 1524
AhlI ACTAGT 1 cut(s) 557
AjiI CACGTC 1 cut(s) 859
AjnI CCWGG 1 cut(s) 2289
AjuI GAANNNNNNNTTGG 6 cut(s) 297, 329, 1321, 1353, 1461, 1493
Alw21I GWGCWC 6 cut(s) 1286, 1486, 1498, 1691, 2004, 2136
AlwI GGATC 5 cut(s) 475, 953, 1399, 1823, 2278
AlwNI CAGNNNCTG 1 cut(s) 1868
Ama87I CYCGRG 1 cut(s) 382
Aor13HI TCCGGA 1 cut(s) 1993
Aor51HI AGCGCT 1 cut(s) 2558
AoxI GGCC 5 cut(s) 3, 235, 289, 950, 1237
ApeKI GCWGC 8 cut(s) 83, 275, 1134, 1865, 2395, 2474, 2551, 2554
ApoI RAATTY 6 cut(s) 241, 724, 782, 1048, 1149, 2313
AsiGI ACCGGT 1 cut(s) 1524
AspLEI GCGC 2 cut(s) 1581, 2559
AspS9I GGNCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
AsuHPI GGTGA 6 cut(s) 233, 1085, 1229, 1577, 1883, 2429
AvaI CYCGRG 1 cut(s) 382
AvaII GGWCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
BaeGI GKGCMC 1 cut(s) 2425
BaeI ACNNNNGTAYC 4 cut(s) 1212, 1245, 2205, 2238
BalI TGGCCA 2 cut(s) 5, 237
BanI GGYRCC 1 cut(s) 572
BanII GRGCYC 3 cut(s) 1486, 1691, 2136
BauI CACGAG 1 cut(s) 1815
Bbv12I GWGCWC 6 cut(s) 1286, 1486, 1498, 1691, 2004, 2136
BbvCI CCTCAGC 1 cut(s) 1861
BbvI GCAGC 8 cut(s) 70, 287, 1121, 1852, 2382, 2486, 2563, 2566
BciT130I CCWGG 1 cut(s) 2291
BclI TGATCA 3 cut(s) 103, 202, 2538
BcuI ACTAGT 1 cut(s) 557
BfaI CTAG 4 cut(s) 558, 801, 1131, 2042
BfmI CTRYAG 6 cut(s) 513, 666, 1377, 1540, 1722, 2472
BfoI RGCGCY 1 cut(s) 2560
BfrI CTTAAG 1 cut(s) 521
BfuAI ACCTGC 1 cut(s) 2587
BisI GCNGC 8 cut(s) 84, 276, 1135, 1866, 2396, 2475, 2552, 2555
BlsI GCNGC 8 cut(s) 85, 277, 1136, 1867, 2397, 2476, 2553, 2556
BmcAI AGTACT 1 cut(s) 771
Bme1390I CCNGG 1 cut(s) 2291
Bme18I GGWCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
BmeT110I CYCGRG 1 cut(s) 382
BmgBI CACGTC 1 cut(s) 859
BmgT120I GGNCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
BmiI GGNNCC 4 cut(s) 574, 1465, 2569, 2601
BmrFI CCNGG 1 cut(s) 2291
BmsI GCATC 7 cut(s) 945, 1291, 1812, 1999, 2013, 2065, 2284
BplI GAGNNNNNCTC 2 cut(s) 1048, 1080
BpmI CTGGAG 1 cut(s) 174
Bpu10I CCTNAGC 1 cut(s) 1861
BpuEI CTTGAG 6 cut(s) 72, 521, 745, 1117, 1270, 2150
BsaJI CCNNGG 4 cut(s) 304, 490, 1477, 2113
BsaWI WCCGGW 3 cut(s) 261, 1524, 1993
BsaXI ACNNNNNCTCC 4 cut(s) 1473, 1503, 2315, 2345
Bsc4I CCNNNNNNNGG 5 cut(s) 298, 329, 1666, 1902, 2119
Bse118I RCCGGY 1 cut(s) 1524
Bse1I ACTGG 3 cut(s) 658, 1750, 2610
BseAI TCCGGA 1 cut(s) 1993
BseBI CCWGG 1 cut(s) 2291
BseDI CCNNGG 4 cut(s) 304, 490, 1477, 2113
BseLI CCNNNNNNNGG 5 cut(s) 298, 329, 1666, 1902, 2119
BseMII CTCAG 3 cut(s) 498, 782, 1875
BseNI ACTGG 3 cut(s) 658, 1750, 2610
BseRI GAGGAG 1 cut(s) 822
BseSI GKGCMC 1 cut(s) 2425
BseXI GCAGC 8 cut(s) 70, 287, 1121, 1852, 2382, 2486, 2563, 2566
Bsh1236I CGCG 1 cut(s) 1579
BshFI GGCC 5 cut(s) 5, 237, 291, 952, 1239
BshNI GGYRCC 1 cut(s) 572
BshTI ACCGGT 1 cut(s) 1524
BsiHKAI GWGCWC 6 cut(s) 1286, 1486, 1498, 1691, 2004, 2136
BsiHKCI CYCGRG 1 cut(s) 382
BsiSI CCGG 3 cut(s) 262, 1525, 1994
BslFI GGGAC 2 cut(s) 2553, 2585
BslI CCNNNNNNNGG 5 cut(s) 298, 329, 1666, 1902, 2119
BsmFI GGGAC 2 cut(s) 2553, 2585
BsmI GAATGC 2 cut(s) 1045, 2574
BsnI GGCC 5 cut(s) 5, 237, 291, 952, 1239
BsoBI CYCGRG 1 cut(s) 382
Bsp1286I GDGCHC 7 cut(s) 1286, 1486, 1498, 1691, 2004, 2136, 2425
Bsp13I TCCGGA 1 cut(s) 1993
Bsp1407I TGTACA 2 cut(s) 294, 2415
BspACI CCGC 2 cut(s) 256, 1215
BspANI GGCC 5 cut(s) 5, 237, 291, 952, 1239
BspCNI CTCAG 3 cut(s) 497, 783, 1874
BspEI TCCGGA 1 cut(s) 1993
BspFNI CGCG 1 cut(s) 1579
BspLI GGNNCC 4 cut(s) 574, 1465, 2569, 2601
BspMAI CTGCAG 2 cut(s) 1726, 2476
BspMI ACCTGC 1 cut(s) 2587
BspPI GGATC 5 cut(s) 475, 953, 1399, 1823, 2278
BspT107I GGYRCC 1 cut(s) 572
BspTI CTTAAG 1 cut(s) 521
BsrFI RCCGGY 1 cut(s) 1524
BsrGI TGTACA 2 cut(s) 294, 2415
BsrI ACTGG 3 cut(s) 658, 1750, 2610
BssAI RCCGGY 1 cut(s) 1524
BssECI CCNNGG 4 cut(s) 304, 490, 1477, 2113
BssNAI GTATAC 2 cut(s) 1254, 2525
BssSI CACGAG 1 cut(s) 1815
BssT1I CCWWGG 4 cut(s) 304, 490, 1477, 2113
Bst1107I GTATAC 2 cut(s) 1254, 2525
Bst2BI CACGAG 1 cut(s) 1815
Bst2UI CCWGG 1 cut(s) 2291
Bst6I CTCTTC 1 cut(s) 318
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 2471
BstAUI TGTACA 2 cut(s) 294, 2415
BstC8I GCNNGC 2 cut(s) 1888, 2467
BstDEI CTNAG 4 cut(s) 484, 577, 791, 1861
BstFNI CGCG 1 cut(s) 1579
BstH2I RGCGCY 1 cut(s) 2560
BstHHI GCGC 2 cut(s) 1581, 2559
BstMWI GCNNNNNNNGC 4 cut(s) 119, 1809, 2471, 2615
BstNI CCWGG 1 cut(s) 2291
BstNSI RCATGY 4 cut(s) 1019, 1953, 2329, 2405
BstSCI CCNGG 1 cut(s) 2289
BstSFI CTRYAG 6 cut(s) 513, 666, 1377, 1540, 1722, 2472
BstSLI GKGCMC 1 cut(s) 2425
BstUI CGCG 1 cut(s) 1579
BstV1I GCAGC 8 cut(s) 70, 287, 1121, 1852, 2382, 2486, 2563, 2566
BstX2I RGATCY 1 cut(s) 2270
BstYI RGATCY 1 cut(s) 2270
BstZ17I GTATAC 2 cut(s) 1254, 2525
BsuRI GGCC 5 cut(s) 5, 237, 291, 952, 1239
BtgZI GCGATG 1 cut(s) 158
BtrI CACGTC 1 cut(s) 859
BtsI GCAGTG 2 cut(s) 195, 757
BtsIMutI CAGTG 8 cut(s) 165, 195, 574, 663, 757, 1213, 1708, 2617
BveI ACCTGC 1 cut(s) 2587
Cac8I GCNNGC 2 cut(s) 1888, 2467
CaiI CAGNNNCTG 1 cut(s) 1868
CfoI GCGC 2 cut(s) 1581, 2559
Cfr10I RCCGGY 1 cut(s) 1524
Cfr13I GGNCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
CseI GACGC 1 cut(s) 392
CspAI ACCGGT 1 cut(s) 1524
DdeI CTNAG 4 cut(s) 484, 577, 791, 1861
DraI TTTAAA 1 cut(s) 732
EaeI YGGCCR 2 cut(s) 3, 235
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Ecl136II GAGCTC 3 cut(s) 1484, 1689, 2134
Eco130I CCWWGG 4 cut(s) 304, 490, 1477, 2113
Eco147I AGGCCT 2 cut(s) 291, 952
Eco24I GRGCYC 3 cut(s) 1486, 1691, 2136
Eco47I GGWCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
Eco47III AGCGCT 1 cut(s) 2558
Eco53kI GAGCTC 3 cut(s) 1484, 1689, 2134
Eco57I CTGAAG 2 cut(s) 63, 1650
Eco88I CYCGRG 1 cut(s) 382
EcoICRI GAGCTC 3 cut(s) 1484, 1689, 2134
EcoO109I RGGNCCY 1 cut(s) 2599
EcoRI GAATTC 2 cut(s) 241, 1048
EcoRII CCWGG 1 cut(s) 2289
EcoT14I CCWWGG 4 cut(s) 304, 490, 1477, 2113
EcoT22I ATGCAT 2 cut(s) 2299, 2407
EcoT38I GRGCYC 3 cut(s) 1486, 1691, 2136
ErhI CCWWGG 4 cut(s) 304, 490, 1477, 2113
FalI AAGNNNNNCTT 4 cut(s) 297, 329, 1036, 1068
FaqI GGGAC 2 cut(s) 2553, 2585
FauNDI CATATG 4 cut(s) 217, 394, 1714, 2407
FbaI TGATCA 3 cut(s) 103, 202, 2538
FblI GTMKAC 3 cut(s) 918, 1253, 2524
Fnu4HI GCNGC 8 cut(s) 84, 276, 1135, 1866, 2396, 2475, 2552, 2555
FriOI GRGCYC 3 cut(s) 1486, 1691, 2136
Fsp4HI GCNGC 8 cut(s) 84, 276, 1135, 1866, 2396, 2475, 2552, 2555
FspBI CTAG 4 cut(s) 558, 801, 1131, 2042
GlaI GCGC 2 cut(s) 1580, 2558
GluI GCNGC 8 cut(s) 84, 276, 1135, 1866, 2396, 2475, 2552, 2555
GsuI CTGGAG 1 cut(s) 174
HaeII RGCGCY 1 cut(s) 2560
HaeIII GGCC 5 cut(s) 5, 237, 291, 952, 1239
HapII CCGG 3 cut(s) 262, 1525, 1994
HgaI GACGC 1 cut(s) 392
HhaI GCGC 2 cut(s) 1581, 2559
Hin6I GCGC 2 cut(s) 1579, 2557
HinP1I GCGC 2 cut(s) 1579, 2557
HincII GTYRAC 1 cut(s) 160
HindII GTYRAC 1 cut(s) 160
HindIII AAGCTT 1 cut(s) 412
HinfI GANTC 8 cut(s) 440, 995, 1032, 1057, 1175, 1718, 2360, 2450
HpaI GTTAAC 1 cut(s) 160
HpaII CCGG 3 cut(s) 262, 1525, 1994
HphI GGTGA 6 cut(s) 233, 1085, 1229, 1577, 1883, 2429
Hpy166II GTNNAC 8 cut(s) 160, 335, 663, 919, 1254, 1504, 2085, 2525
Hpy188I TCNGA 8 cut(s) 207, 408, 439, 487, 847, 1828, 2193, 2359
Hpy8I GTNNAC 8 cut(s) 160, 335, 663, 919, 1254, 1504, 2085, 2525
HpyAV CCTTC 5 cut(s) 79, 654, 977, 1625, 2112
HpyCH4IV ACGT 3 cut(s) 49, 858, 971
HpyF10VI GCNNNNNNNGC 4 cut(s) 119, 1809, 2471, 2615
HpyF3I CTNAG 4 cut(s) 484, 577, 791, 1861
HpySE526I ACGT 3 cut(s) 49, 858, 971
HspAI GCGC 2 cut(s) 1579, 2557
Kpn2I TCCGGA 1 cut(s) 1993
Ksp22I TGATCA 3 cut(s) 103, 202, 2538
KspAI GTTAAC 1 cut(s) 160
LmnI GCTCC 8 cut(s) 127, 272, 451, 1155, 1481, 1489, 1501, 2007
Lsp1109I GCAGC 8 cut(s) 70, 287, 1121, 1852, 2382, 2486, 2563, 2566
LweI GCATC 7 cut(s) 945, 1291, 1812, 1999, 2013, 2065, 2284
MaeI CTAG 4 cut(s) 558, 801, 1131, 2042
MaeII ACGT 3 cut(s) 49, 858, 971
MaeIII GTNAC 7 cut(s) 43, 226, 326, 903, 1181, 1697, 2158
MboII GAAGA 7 cut(s) 305, 435, 883, 902, 1469, 2459, 2570
MfeI CAATTG 5 cut(s) 117, 246, 1119, 1586, 2441
MflI RGATCY 1 cut(s) 2270
MhlI GDGCHC 7 cut(s) 1286, 1486, 1498, 1691, 2004, 2136, 2425
MlsI TGGCCA 2 cut(s) 5, 237
MluNI TGGCCA 2 cut(s) 5, 237
MlyI GAGTC 2 cut(s) 1066, 1184
MmeI TCCRAC 9 cut(s) 328, 445, 501, 598, 1369, 1459, 1784, 1962, 2236
Mox20I TGGCCA 2 cut(s) 5, 237
Mph1103I ATGCAT 2 cut(s) 2299, 2407
MroI TCCGGA 1 cut(s) 1993
MscI TGGCCA 2 cut(s) 5, 237
MseI TTAA 7 cut(s) 56, 159, 522, 563, 731, 1983, 2623
MslI CAYNNNNRTG 5 cut(s) 147, 1071, 1948, 1995, 2406
Msp20I TGGCCA 2 cut(s) 5, 237
MspA1I CMGCKG 3 cut(s) 83, 278, 1865
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 3 cut(s) 262, 1525, 1994
MspR9I CCNGG 1 cut(s) 2291
MunI CAATTG 5 cut(s) 117, 246, 1119, 1586, 2441
Mva1269I GAATGC 2 cut(s) 1045, 2574
MvaI CCWGG 1 cut(s) 2291
MvnI CGCG 1 cut(s) 1579
MwoI GCNNNNNNNGC 4 cut(s) 119, 1809, 2471, 2615
NdeI CATATG 4 cut(s) 217, 394, 1714, 2407
NlaIV GGNNCC 4 cut(s) 574, 1465, 2569, 2601
NmuCI GTSAC 3 cut(s) 43, 326, 1697
NsiI ATGCAT 2 cut(s) 2299, 2407
NspI RCATGY 4 cut(s) 1019, 1953, 2329, 2405
PaeR7I CTCGAG 1 cut(s) 382
PceI AGGCCT 2 cut(s) 291, 952
PciI ACATGT 2 cut(s) 1015, 2325
PctI GAATGC 2 cut(s) 1045, 2574
PfeI GAWTC 6 cut(s) 440, 995, 1032, 1718, 2360, 2450
PflFI GACNNNGTC 2 cut(s) 402, 1174
PfoI TCCNGGA 1 cut(s) 2289
PinAI ACCGGT 1 cut(s) 1524
PkrI GCNGC 8 cut(s) 85, 277, 1136, 1867, 2397, 2476, 2553, 2556
PleI GAGTC 2 cut(s) 1065, 1183
PpsI GAGTC 2 cut(s) 1065, 1183
PpuMI RGGWCCY 1 cut(s) 2599
PscI ACATGT 2 cut(s) 1015, 2325
Psp124BI GAGCTC 3 cut(s) 1486, 1691, 2136
Psp1406I AACGTT 1 cut(s) 971
Psp5II RGGWCCY 1 cut(s) 2599
Psp6I CCWGG 1 cut(s) 2289
PspGI CCWGG 1 cut(s) 2289
PspN4I GGNNCC 4 cut(s) 574, 1465, 2569, 2601
PspPI GGNCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
PspPPI RGGWCCY 1 cut(s) 2599
PsrI GAACNNNNNNTAC 2 cut(s) 644, 676
PstI CTGCAG 2 cut(s) 1726, 2476
PstNI CAGNNNCTG 1 cut(s) 1868
PsuI RGATCY 1 cut(s) 2270
PsyI GACNNNGTC 2 cut(s) 402, 1174
PvuII CAGCTG 3 cut(s) 83, 278, 1865
RseI CAYNNNNRTG 5 cut(s) 147, 1071, 1948, 1995, 2406
SacI GAGCTC 3 cut(s) 1486, 1691, 2136
SaqAI TTAA 7 cut(s) 56, 159, 522, 563, 731, 1983, 2623
SatI GCNGC 8 cut(s) 84, 276, 1135, 1866, 2396, 2475, 2552, 2555
Sau96I GGNCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
ScaI AGTACT 1 cut(s) 771
SchI GAGTC 2 cut(s) 1066, 1184
ScrFI CCNGG 1 cut(s) 2291
SduI GDGCHC 7 cut(s) 1286, 1486, 1498, 1691, 2004, 2136, 2425
SfaNI GCATC 7 cut(s) 945, 1291, 1812, 1999, 2013, 2065, 2284
SfcI CTRYAG 6 cut(s) 513, 666, 1377, 1540, 1722, 2472
Sfr274I CTCGAG 1 cut(s) 382
SinI GGWCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
SlaI CTCGAG 1 cut(s) 382
SmiMI CAYNNNNRTG 5 cut(s) 147, 1071, 1948, 1995, 2406
SmlI CTYRAG 8 cut(s) 87, 382, 521, 536, 760, 1096, 1285, 2129
SmoI CTYRAG 8 cut(s) 87, 382, 521, 536, 760, 1096, 1285, 2129
SpeI ACTAGT 1 cut(s) 557
SseBI AGGCCT 2 cut(s) 291, 952
SsiI CCGC 2 cut(s) 256, 1215
SspI AATATT 1 cut(s) 877
SspMI CTAG 4 cut(s) 558, 801, 1131, 2042
SstI GAGCTC 3 cut(s) 1486, 1691, 2136
StuI AGGCCT 2 cut(s) 291, 952
StyD4I CCNGG 1 cut(s) 2289
StyI CCWWGG 4 cut(s) 304, 490, 1477, 2113
TaiI ACGT 3 cut(s) 52, 861, 974
TaqI TCGA 5 cut(s) 383, 1030, 1451, 1806, 2089
TatI WGTACW 6 cut(s) 250, 294, 660, 769, 965, 2415
TfiI GAWTC 6 cut(s) 440, 995, 1032, 1718, 2360, 2450
Tru1I TTAA 7 cut(s) 56, 159, 522, 563, 731, 1983, 2623
Tru9I TTAA 7 cut(s) 56, 159, 522, 563, 731, 1983, 2623
TscAI CASTG 8 cut(s) 172, 202, 574, 670, 757, 1213, 1708, 2617
TseFI GTSAC 3 cut(s) 43, 326, 1697
TseI GCWGC 8 cut(s) 83, 275, 1134, 1865, 2395, 2474, 2551, 2554
Tsp45I GTSAC 3 cut(s) 43, 326, 1697
TspGWI ACGGA 1 cut(s) 767
TspRI CASTG 8 cut(s) 172, 202, 574, 670, 757, 1213, 1708, 2617
Tth111I GACNNNGTC 2 cut(s) 402, 1174
Vha464I CTTAAG 1 cut(s) 521
VpaK11BI GGWCC 6 cut(s) 301, 620, 1504, 2287, 2567, 2599
XapI RAATTY 6 cut(s) 241, 724, 782, 1048, 1149, 2313
XceI RCATGY 4 cut(s) 1019, 1953, 2329, 2405
XcmI CCANNNNNNNNNTGG 1 cut(s) 1903
XhoI CTCGAG 1 cut(s) 382
XmiI GTMKAC 3 cut(s) 918, 1253, 2524
XspI CTAG 4 cut(s) 558, 801, 1131, 2042
ZrmI AGTACT 1 cut(s) 771
Zsp2I ATGCAT 2 cut(s) 2299, 2407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.