FvH4_3g20380

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000420
Physical Location & Seq
Reverse (-)
13425200 .. 13428076
2877 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g20380.t1

Sequence Viewer

Length: 2877 bp
ATGATGGTTGTCTGGTTGACCTGGAGTTCAGACTATATTCCATGTACAAAATACATTGCATTGGTTGTTGCTCTTGCTCCTGTTCTTTCTTCTAATATGACTATCTTGAACAAAAACTCGACTTTCTTCTTTATTTTCGTTACACTTCTATTGAATTTTGTTCCATTCTGCACTTCAGCTGCTCTAGTCTCTTTTTCTGATCATTGCACTTCACTGCTTACTCCTGACTACTCAACTACTGAAGGATATGCCGGAGTTAACTCCTCTGTTCATAGCCTCACAGGTTTCTACCACACTTCCGATGGAAGTAACATTCTTAGTCAGAACTCCACATATGGTGCGGTTCAAAATTCAGTTGAATTCCACTTCTGGTATGATGGAGCCGCTGATGAACGAGGCTTGTTCAGAGTCCAAGGAAGCCTTGAATTTCCACGGCACGCAACATATTTTATTGTGGGAAACTCCAATGGTGGCCAGGAATCCACTGACTTCAGATCCAAATCAGTTCTCTGTGGCCAAGGTTGGCCAAGCTTCAAGTTGAATGGGATCTGGTCAGAAGCTTCTGGGGAGCTTTGTATGGTTGGATCAGGTTCTTGTTACTCAAAACATGGTAATGTACTTGAACTTCCTGCACTTCTTAAGCTCTATAAACTCAAGAATTCCAGTAGTCTTACTAGCTTGATTAGTGGAACCTTAGAGAGCTTGGTAAGTTATAATAATGAGCCAAATTATTTTGGACCGCTTTCTATGTCAATGCTTCCTTCCATGAACTACCAGTACACTTTTGCTTATGTGCCTCAGAGCAGCTGTTCTGATGGAAATGTAGCTCCCCCACTTTCTTTAAAAATAGAGGGATTTTGTTCTACGATCTCAGATTTAGTACTAATGCGCAAATTTGAACTGAAATATCCAAGTCATTGTGTGTCTGCAAAGAACTGCTCCCCACTTTCTGTGTCTGATAACTCTGATTTGCCTTCCTACATGTCACTTTGGAATATCGAGTGTTTGGAAGATGAAAAGAAGTTGAGAGTGTTGGTAGATTTTGTATCTGGTAGCATCTGGCGTCAGCGCCTTTTCAATCCTAGTACAACTTTGGTTGGGGAAGGTTCATGGGACGCAGAGAAAAATCAGCTGTGTGTTGTTGCTTGTCGATTCTCGGATGCAAAAAATTCCTTGAATATTGCTAATGTTGATGATTGTTCAACAAGAGTGAGCTTTTGGATTCCTGCAGCGTGGACAATCACAAGTACTAGCAGCATTCAGGGGCAGGTTTGGAGCAACAAAGCGGCGACTGAGCCAGATTACTTTCAGAAAATCATATTTGAAAGTAGTCAGAATGGGGTAATAGATTATCCACTTCAAGGCCAGGAATATGAGTACACTAAAACAGGCAAAGTAGCAAAACTGTGCCAAAGGAAGAAGATTGCTAATGACAACAGCAACAACACTTATCCACATCCATTTTCTTATGTCATGAGATTCCGCATATCAGCTAAGAAATACACAGGAGAAGAAATTGCGTGGGGCATTTCTACCCCTCTCTCTGTTGGAAATCAATTTTACTCTCAGGTGTCTGATTCCATCAGAACTGAAGAATACCCTCTTGGGTCTGAAGGTCCTCCTGTGAGCCACAGCAACATCCATAACATTAGCTATAAAATAAGCATCAAAGCAAGAGGTGAGGTTCAGTTGCCCAATGGATTCTACATGCTTAATTCTTTTAGCAAAATGGTGATTTCTGCTGAAGGAATTTATGATGTTACAGAAGGAAGCCTGTGCATGATAGGTTGCCGAGATGTACACACAGAACAGTCAACAAGTGACTCTGTAGACTGTGAAATTATTGTCAACATTGAGTTCCCTCCAACAAATCCAAGGAGTAGTTATCTGAGATTTATCAATGGAAGCATCGAAAGCACTCGGAAAAAGTCTGATCCACTATATTTTGAAAGAGTGGAGTTCACTTCAGCTGCCCTTTACAATTATGAAGCAGAGCGAACGATTTGGTGGATGGATGTGGAGATCATCATGGTTTTGTTATCCAACATATTTGCATGTGTTTTTGGGATATTACAACTCTTTTATGTGAAAAGGCATCCCGATGTGCTTCCCTGTGTCTCCATCTGCATGCTTTATATTCTTGGTCTAGGCTCCACAATACCTCTCGTACTAAACTTTGATGCCATGATCACACCATACAGTAGCCAAACTCTGTTCCTTGGGAGCAATGGATGGCATGAATTCAATGAAATAATTGTAAATACAATAATAATGGTTAGTTTCTTGGTTCAAATCCGGCTTCTAAAGTTGACATGGTCAGCAAGATCAACAAATGGAAACCAGAAGGAGCTCTGGGGTGTGGAGAAGCTAGCTCTCTTTGTGGCTTTACCAGTATTTGTTGCAGGGTCCTTACTTGCTTTGCTTTTGATGAATTGGAGGATGATGTACTATATTGTCGACATGATCATTGTTTCAGGGCATGAGGTGCGTGACATTTTAGGTACTGTTTTGAAAACTTGTGCTGGTCTGGTTTTGGATGCATTTTTGTTGCCTCAAATTGTGCTCAACATCTTCCGCAAATCAAAGGAAAATTCACTCGCAGCTTCGTTCTACATTGGAACAACTTTTGTTCGAGTGCTGCCACATGCATATTATGTTTACAGGGATCATCATAACTTTGTACAGAATCAATTAGATTTGTCATACATTTATGCTGGTCCTGCACAATATATGTACTCTACTGCTTGGAATGTCATTATTCCTTGTGGAGGTCTACTTTTTGCTGGGATAATTTACTTGCAGCAGCGGTTTGGAGGGCGCTGCATTCTTCCTCATAAGTTGAGAGAGTTTGGTGCATATGAGAAGGTCAATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

959

Amino Acids

107.33

Weight (kDa)

6.09

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 67 - 249 3.2e-16 DUF2921 lipocalin-like domain
DUF2921_N PF25333 292 - 439 9.4e-27 DUF2921 lipocalin-like domain
DUF2921_N PF25333 468 - 652 3.5e-32 DUF2921 lipocalin-like domain
DUF2921 PF11145 664 - 946 1.6e-53 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 714
Acc16I TGCGCA 1 cut(s) 890
Acc36I ACCTGC 1 cut(s) 1258
AccI GTMKAC 3 cut(s) 1830, 2457, 2773
AciI CCGC 7 cut(s) 341, 384, 740, 1286, 1483, 2575, 2806
AclWI GGATC 5 cut(s) 489, 554, 592, 1928, 2673
AcoI YGGCCR 3 cut(s) 472, 514, 524
AcuI CTGAAG 7 cut(s) 159, 261, 475, 1611, 1632, 1764, 1950
AcyI GRCGYC 1 cut(s) 1063
AfiI CCNNNNNNNGG 2 cut(s) 1361, 2768
AflII CTTAAG 1 cut(s) 638
AflIII ACRYGT 1 cut(s) 981
AjnI CCWGG 3 cut(s) 20, 474, 1365
AjuI GAANNNNNNNTTGG 2 cut(s) 1587, 1619
Alw21I GWGCWC 2 cut(s) 2352, 2565
Alw26I GTCTC 2 cut(s) 193, 2122
AlwI GGATC 5 cut(s) 489, 554, 592, 1928, 2673
AoxI GGCC 4 cut(s) 472, 514, 524, 1363
AspLEI GCGC 3 cut(s) 891, 1071, 2820
AspS9I GGNCC 4 cut(s) 737, 1616, 2406, 2717
AsuHPI GGTGA 2 cut(s) 1691, 1744
AsuNHI GCTAGC 1 cut(s) 2368
AvaII GGWCC 4 cut(s) 737, 1616, 2406, 2717
BalI TGGCCA 3 cut(s) 474, 516, 526
BanII GRGCYC 1 cut(s) 2352
BarI GAAGNNNNNNTAC 2 cut(s) 609, 641
Bbv12I GWGCWC 2 cut(s) 2352, 2565
BccI CCATC 7 cut(s) 296, 371, 809, 1589, 2005, 2129, 2226
BceAI ACGGC 1 cut(s) 449
BciT130I CCWGG 3 cut(s) 22, 476, 1367
BclI TGATCA 3 cut(s) 199, 2187, 2463
BcoDI GTCTC 2 cut(s) 193, 2122
BfaI CTAG 6 cut(s) 185, 675, 1083, 1251, 2147, 2369
BfmI CTRYAG 2 cut(s) 1227, 1827
BfoI RGCGCY 2 cut(s) 1072, 2821
BfrI CTTAAG 1 cut(s) 638
BfuAI ACCTGC 1 cut(s) 1258
BmcAI AGTACT 2 cut(s) 882, 1249
Bme1390I CCNGG 3 cut(s) 22, 476, 1367
Bme18I GGWCC 4 cut(s) 737, 1616, 2406, 2717
BmgT120I GGNCC 4 cut(s) 737, 1616, 2406, 2717
BmiI GGNNCC 4 cut(s) 382, 691, 2152, 2407
BmrFI CCNGG 3 cut(s) 22, 476, 1367
BmsI GCATC 7 cut(s) 1065, 1150, 1674, 1917, 2104, 2170, 2527
BmtI GCTAGC 1 cut(s) 2372
BpmI CTGGAG 1 cut(s) 43
BpuEI CTTGAG 1 cut(s) 638
BsaBI GATNNNNATC 1 cut(s) 499
BsaHI GRCGYC 1 cut(s) 1063
BsaJI CCNNGG 5 cut(s) 412, 431, 517, 1874, 2218
Bsc4I CCNNNNNNNGG 2 cut(s) 1361, 2768
Bse1I ACTGG 3 cut(s) 663, 775, 2390
Bse3DI GCAATG 3 cut(s) 54, 202, 2233
Bse8I GATNNNNATC 1 cut(s) 499
BseBI CCWGG 3 cut(s) 22, 476, 1367
BseDI CCNNGG 5 cut(s) 412, 431, 517, 1874, 2218
BseGI GGATG 9 cut(s) 1165, 1456, 1638, 2016, 2020, 2095, 2237, 2445, 2542
BseJI GATNNNNATC 1 cut(s) 499
BseLI CCNNNNNNNGG 2 cut(s) 1361, 2768
BseMI GCAATG 3 cut(s) 54, 202, 2233
BseMII CTCAG 5 cut(s) 812, 885, 1284, 1580, 1880
BseNI ACTGG 3 cut(s) 663, 775, 2390
BseRI GAGGAG 1 cut(s) 253
BseYI CCCAGC 1 cut(s) 2783
BsgI GTGCAG 3 cut(s) 154, 615, 2706
BshFI GGCC 4 cut(s) 474, 516, 526, 1365
BsiHKAI GWGCWC 2 cut(s) 2352, 2565
BsiSI CCGG 2 cut(s) 252, 2296
BslFI GGGAC 1 cut(s) 1127
BslI CCNNNNNNNGG 2 cut(s) 1361, 2768
BsmAI GTCTC 2 cut(s) 193, 2122
BsmFI GGGAC 1 cut(s) 1127
BsmI GAATGC 2 cut(s) 1257, 2823
BsnI GGCC 4 cut(s) 474, 516, 526, 1365
Bsp1286I GDGCHC 2 cut(s) 2352, 2565
Bsp1407I TGTACA 3 cut(s) 44, 1798, 2680
BspACI CCGC 7 cut(s) 341, 384, 740, 1286, 1483, 2575, 2806
BspANI GGCC 4 cut(s) 474, 516, 526, 1365
BspCNI CTCAG 5 cut(s) 811, 884, 1285, 1579, 1881
BspHI TCATGA 1 cut(s) 1473
BspLI GGNNCC 4 cut(s) 382, 691, 2152, 2407
BspMAI CTGCAG 1 cut(s) 1231
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 2372
BspPI GGATC 5 cut(s) 489, 554, 592, 1928, 2673
BspTI CTTAAG 1 cut(s) 638
BsrDI GCAATG 3 cut(s) 54, 202, 2233
BsrGI TGTACA 3 cut(s) 44, 1798, 2680
BsrI ACTGG 3 cut(s) 663, 775, 2390
BssECI CCNNGG 5 cut(s) 412, 431, 517, 1874, 2218
BssNI GRCGYC 1 cut(s) 1063
BssT1I CCWWGG 4 cut(s) 412, 517, 1874, 2218
Bst2UI CCWGG 3 cut(s) 22, 476, 1367
Bst4CI ACNGT 5 cut(s) 1407, 1812, 1835, 2201, 2506
BstACI GRCGYC 1 cut(s) 1063
BstAFI CTTAAG 1 cut(s) 638
BstAPI GCANNNNNTGC 1 cut(s) 2485
BstAUI TGTACA 3 cut(s) 44, 1798, 2680
BstC8I GCNNGC 3 cut(s) 438, 2129, 2370
BstDEI CTNAG 8 cut(s) 317, 694, 798, 871, 1293, 1494, 1566, 1889
BstDSI CCRYGG 1 cut(s) 431
BstENI CCTNNNNNAGG 1 cut(s) 2766
BstF5I GGATG 9 cut(s) 1165, 1456, 1638, 2016, 2020, 2095, 2237, 2445, 2542
BstH2I RGCGCY 2 cut(s) 1072, 2821
BstHHI GCGC 3 cut(s) 891, 1071, 2820
BstMAI GTCTC 2 cut(s) 193, 2122
BstMWI GCNNNNNNNGC 3 cut(s) 1914, 2485, 2720
BstNI CCWGG 3 cut(s) 22, 476, 1367
BstNSI RCATGY 5 cut(s) 985, 1711, 2058, 2131, 2648
BstSCI CCNGG 3 cut(s) 20, 474, 1365
BstSFI CTRYAG 2 cut(s) 1227, 1827
BstX2I RGATCY 2 cut(s) 494, 546
BstYI RGATCY 2 cut(s) 494, 546
BsuRI GGCC 4 cut(s) 474, 516, 526, 1365
BtgI CCRYGG 1 cut(s) 431
BtsCI GGATG 9 cut(s) 1165, 1456, 1638, 2016, 2020, 2095, 2237, 2445, 2542
BtsI GCAGTG 1 cut(s) 212
BtsIMutI CAGTG 2 cut(s) 212, 483
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 3 cut(s) 438, 2129, 2370
CciI TCATGA 1 cut(s) 1473
CfoI GCGC 3 cut(s) 891, 1071, 2820
Cfr13I GGNCC 4 cut(s) 737, 1616, 2406, 2717
CseI GACGC 2 cut(s) 1052, 1124
DdeI CTNAG 8 cut(s) 317, 694, 798, 871, 1293, 1494, 1566, 1889
DraI TTTAAA 1 cut(s) 843
EaeI YGGCCR 3 cut(s) 472, 514, 524
Ecl136II GAGCTC 1 cut(s) 2350
Eco130I CCWWGG 4 cut(s) 412, 517, 1874, 2218
Eco24I GRGCYC 1 cut(s) 2352
Eco47I GGWCC 4 cut(s) 737, 1616, 2406, 2717
Eco53kI GAGCTC 1 cut(s) 2350
Eco57I CTGAAG 7 cut(s) 159, 261, 475, 1611, 1632, 1764, 1950
EcoICRI GAGCTC 1 cut(s) 2350
EcoNI CCTNNNNNAGG 1 cut(s) 2766
EcoO109I RGGNCCY 2 cut(s) 1616, 2406
EcoRI GAATTC 3 cut(s) 359, 658, 2240
EcoRII CCWGG 3 cut(s) 20, 474, 1365
EcoT14I CCWWGG 4 cut(s) 412, 517, 1874, 2218
EcoT22I ATGCAT 2 cut(s) 2542, 2650
EcoT38I GRGCYC 1 cut(s) 2352
ErhI CCWWGG 4 cut(s) 412, 517, 1874, 2218
FalI AAGNNNNNCTT 2 cut(s) 405, 437
FaqI GGGAC 1 cut(s) 1127
FauNDI CATATG 2 cut(s) 334, 2857
FbaI TGATCA 3 cut(s) 199, 2187, 2463
FblI GTMKAC 3 cut(s) 1830, 2457, 2773
FokI GGATG 9 cut(s) 1172, 1443, 1625, 2023, 2027, 2082, 2244, 2452, 2549
FriOI GRGCYC 1 cut(s) 2352
FspBI CTAG 6 cut(s) 185, 675, 1083, 1251, 2147, 2369
FspI TGCGCA 1 cut(s) 890
GlaI GCGC 3 cut(s) 890, 1070, 2819
GsaI CCCAGC 1 cut(s) 2787
GsuI CTGGAG 1 cut(s) 43
HaeII RGCGCY 2 cut(s) 1072, 2821
HaeIII GGCC 4 cut(s) 474, 516, 526, 1365
HapII CCGG 2 cut(s) 252, 2296
HgaI GACGC 2 cut(s) 1052, 1124
HhaI GCGC 3 cut(s) 891, 1071, 2820
Hin1I GRCGYC 1 cut(s) 1063
Hin6I GCGC 3 cut(s) 889, 1069, 2818
HinP1I GCGC 3 cut(s) 889, 1069, 2818
HincII GTYRAC 6 cut(s) 18, 259, 1815, 1849, 2310, 2458
HindII GTYRAC 6 cut(s) 18, 259, 1815, 1849, 2310, 2458
HindIII AAGCTT 2 cut(s) 529, 558
HinfI GANTC 9 cut(s) 408, 479, 1152, 1222, 1479, 1577, 1701, 1823, 2686
HpaI GTTAAC 1 cut(s) 259
HpaII CCGG 2 cut(s) 252, 2296
HphI GGTGA 2 cut(s) 1691, 1744
Hpy188III TCNNGA 5 cut(s) 106, 224, 655, 1474, 2099
HpyAV CCTTC 9 cut(s) 236, 771, 984, 1097, 1607, 1739, 1760, 2338, 2857
HpyCH4III ACNGT 5 cut(s) 1407, 1812, 1835, 2201, 2506
HpyF10VI GCNNNNNNNGC 3 cut(s) 1914, 2485, 2720
HpyF3I CTNAG 8 cut(s) 317, 694, 798, 871, 1293, 1494, 1566, 1889
Hsp92I GRCGYC 1 cut(s) 1063
HspAI GCGC 3 cut(s) 889, 1069, 2818
Ksp22I TGATCA 3 cut(s) 199, 2187, 2463
KspAI GTTAAC 1 cut(s) 259
LmnI GCTCC 9 cut(s) 82, 380, 568, 832, 944, 1275, 2156, 2223, 2347
LweI GCATC 7 cut(s) 1065, 1150, 1674, 1917, 2104, 2170, 2527
MaeI CTAG 6 cut(s) 185, 675, 1083, 1251, 2147, 2369
MaeIII GTNAC 7 cut(s) 139, 308, 596, 984, 1759, 1820, 2489
MboII GAAGA 9 cut(s) 81, 118, 1022, 1429, 1432, 1523, 1604, 2563, 2819
MflI RGATCY 2 cut(s) 494, 546
MhlI GDGCHC 2 cut(s) 2352, 2565
MlsI TGGCCA 3 cut(s) 474, 516, 526
MluNI TGGCCA 3 cut(s) 474, 516, 526
MlyI GAGTC 2 cut(s) 417, 1817
MmeI TCCRAC 4 cut(s) 562, 1528, 1889, 2067
Mox20I TGGCCA 3 cut(s) 474, 516, 526
Mph1103I ATGCAT 2 cut(s) 2542, 2650
MscI TGGCCA 3 cut(s) 474, 516, 526
MseI TTAA 4 cut(s) 258, 639, 842, 1713
MslI CAYNNNNRTG 3 cut(s) 612, 2100, 2126
Msp20I TGGCCA 3 cut(s) 474, 516, 526
MspA1I CMGCKG 6 cut(s) 179, 386, 807, 1132, 1970, 2806
MspCI CTTAAG 1 cut(s) 638
MspI CCGG 2 cut(s) 252, 2296
MspR9I CCNGG 3 cut(s) 22, 476, 1367
Mva1269I GAATGC 2 cut(s) 1257, 2823
MvaI CCWGG 3 cut(s) 22, 476, 1367
MwoI GCNNNNNNNGC 3 cut(s) 1914, 2485, 2720
NdeI CATATG 2 cut(s) 334, 2857
NheI GCTAGC 1 cut(s) 2368
NlaIV GGNNCC 4 cut(s) 382, 691, 2152, 2407
NmeAIII GCCGAG 1 cut(s) 1817
NmuCI GTSAC 3 cut(s) 984, 1820, 2489
NsbI TGCGCA 1 cut(s) 890
NsiI ATGCAT 2 cut(s) 2542, 2650
NspI RCATGY 5 cut(s) 985, 1711, 2058, 2131, 2648
PaeI GCATGC 1 cut(s) 2131
PagI TCATGA 1 cut(s) 1473
PciI ACATGT 1 cut(s) 981
PctI GAATGC 2 cut(s) 1257, 2823
PfeI GAWTC 7 cut(s) 479, 1152, 1222, 1479, 1577, 1701, 2686
PflFI GACNNNGTC 1 cut(s) 2314
PleI GAGTC 2 cut(s) 416, 1817
PpsI GAGTC 2 cut(s) 416, 1817
PpuMI RGGWCCY 2 cut(s) 1616, 2406
PscI ACATGT 1 cut(s) 981
PsiI TTATAA 1 cut(s) 714
Psp124BI GAGCTC 1 cut(s) 2352
Psp5II RGGWCCY 2 cut(s) 1616, 2406
Psp6I CCWGG 3 cut(s) 20, 474, 1365
PspFI CCCAGC 1 cut(s) 2783
PspGI CCWGG 3 cut(s) 20, 474, 1365
PspN4I GGNNCC 4 cut(s) 382, 691, 2152, 2407
PspPI GGNCC 4 cut(s) 737, 1616, 2406, 2717
PspPPI RGGWCCY 2 cut(s) 1616, 2406
PsrI GAACNNNNNNTAC 2 cut(s) 761, 793
PstI CTGCAG 1 cut(s) 1231
PsuI RGATCY 2 cut(s) 494, 546
PsyI GACNNNGTC 1 cut(s) 2314
PvuII CAGCTG 4 cut(s) 179, 807, 1132, 1970
RseI CAYNNNNRTG 3 cut(s) 612, 2100, 2126
SacI GAGCTC 1 cut(s) 2352
SalI GTCGAC 1 cut(s) 2456
SaqAI TTAA 4 cut(s) 258, 639, 842, 1713
Sau96I GGNCC 4 cut(s) 737, 1616, 2406, 2717
ScaI AGTACT 2 cut(s) 882, 1249
SchI GAGTC 2 cut(s) 417, 1817
ScrFI CCNGG 3 cut(s) 22, 476, 1367
SduI GDGCHC 2 cut(s) 2352, 2565
SfaNI GCATC 7 cut(s) 1065, 1150, 1674, 1917, 2104, 2170, 2527
SfcI CTRYAG 2 cut(s) 1227, 1827
SinI GGWCC 4 cut(s) 737, 1616, 2406, 2717
SmiMI CAYNNNNRTG 3 cut(s) 612, 2100, 2126
SmlI CTYRAG 2 cut(s) 638, 653
SmoI CTYRAG 2 cut(s) 638, 653
SphI GCATGC 1 cut(s) 2131
SsiI CCGC 7 cut(s) 341, 384, 740, 1286, 1483, 2575, 2806
SspI AATATT 1 cut(s) 1180
SspMI CTAG 6 cut(s) 185, 675, 1083, 1251, 2147, 2369
SstI GAGCTC 1 cut(s) 2352
StyD4I CCNGG 3 cut(s) 20, 474, 1365
StyI CCWWGG 4 cut(s) 412, 517, 1874, 2218
TaaI ACNGT 5 cut(s) 1407, 1812, 1835, 2201, 2506
TaqI TCGA 6 cut(s) 119, 999, 1150, 1911, 2457, 2632
TauI GCSGC 2 cut(s) 386, 1289
TfiI GAWTC 7 cut(s) 479, 1152, 1222, 1479, 1577, 1701, 2686
Tru1I TTAA 4 cut(s) 258, 639, 842, 1713
Tru9I TTAA 4 cut(s) 258, 639, 842, 1713
TscAI CASTG 2 cut(s) 219, 490
TseFI GTSAC 3 cut(s) 984, 1820, 2489
Tsp45I GTSAC 3 cut(s) 984, 1820, 2489
TspDTI ATGAA 9 cut(s) 260, 405, 782, 1029, 1098, 2001, 2253, 2262, 2444
TspRI CASTG 2 cut(s) 219, 490
Tth111I GACNNNGTC 1 cut(s) 2314
Vha464I CTTAAG 1 cut(s) 638
VpaK11BI GGWCC 4 cut(s) 737, 1616, 2406, 2717
XagI CCTNNNNNAGG 1 cut(s) 2766
XceI RCATGY 5 cut(s) 985, 1711, 2058, 2131, 2648
XcmI CCANNNNNNNNNTGG 1 cut(s) 299
XmiI GTMKAC 3 cut(s) 1830, 2457, 2773
XspI CTAG 6 cut(s) 185, 675, 1083, 1251, 2147, 2369
ZrmI AGTACT 2 cut(s) 882, 1249
Zsp2I ATGCAT 2 cut(s) 2542, 2650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.