Rh5DG244000

Protein of unknown function (DUF2921)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000420
Physical Location & Seq
Reverse (-)
27903569 .. 27906546
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG244000.1

Sequence Viewer

Length: 2541 bp
ATGGTCATCTTTTTCCCTATGACAATCTCCATGAAGCTTTTCATATCCTTCTTCGTTTTTACCACCATATCCTTCAATTCGATGCCATTCTTTGCTTCAGCTGTTCAAATTTCTTATGCTGACCATTGTGCTTCAGTTGTTCCTGAGTCAACCGAAAAAATAAATGCACAATCTCACTTGGTACATCTGATTCACACAGGTTACTACTACACTGGTGGTGGCAGTGACATTCTTAATCTATACTCGCCAAATGATCAGGTCAAAAATTCTATTGGCTTCCAATGCTGGGACATTAGAGAAACTAATGTACAAGGGTTGTTCAAGGTTGAAGGAACTCTTGAGTTTCAAGTAACCCACAGGCATGAGCAGCAAAGCCTGCCAGTTCAAACATTTCCAGGTTCCGTTTCCTTTAGACTAAATGGATTCTGGTCAGAATCTTCTGGGAAGCTTTGCATGGTCGGATCATCATCCATTTACTCAGCACAAGGTAAACTTCTTGTTCTTAAGCTGTACAATATCATGAATTCCACTAGTGTTACAAGTTTGATTAGTGGAACCTTCGAGCATGTCATGATAACTGAGAATGATCCCAAGTCTTTGGGACCAATCTCTATTTTGCTATTCCCTCGCATGAACTACGAGTACACTTTGGTCTCAACTAATTCTAGTAACAGTTGCTCTGGTGGAAGTGAAGATACCCCAAGCTCTTTACAAGTAGAGAGATTTTGTTCACTACTATCATCAGTGGTACTAAATCATGACTTTCAACTCAAATATTCAAGCCACTGTGTTCCTGCAAAGAACTGCACCCCAATTTCTATGTCTGATTGGCCTCGGGCTGTATCGTTGAAGGACATTGTGTGTTCAGAGGATAAACGAAGATTGAGCTTGAGATTTCCTGCAACAGGGACAATTGGAAGTACCAGCAGCATTGTGGGGCATATTTGGAGCACCAAAACTGTGACAGAGTTGGGCTACTTTGAAAAGATCACATTTGCCAGTGGGGAGGACTGTAGTTATCAAGAGTGTCTGCTTCCAGGCCAGACATACGAGTATACTAAAATGGACAAAGTAACAGAGTTGTGCTCGAGAAAGAAGGCTGCTAATGACAAGGCCAGCATTTACCCAAATCTGTTGTTGCATGCCATGAGTTTCATTATGCATGCTGAAAATTCTGAAGGGCAAGTTGGTACAGGCAATGGTGTTCCCCTTTCTGTTGGCGATCAATTTTACAAGACCGATTATTCAACTGTAAGCAGAAATCAAGAATACTCTTTGGCTCCTCTAAGTCACAGCTACAACTACAGCAGCTCCTACAATATTAGCTACAAAATAGACCTCCATCTACAATCTAATCCAGCGTTGGGCAAACAGTCAGTTATATATGAAATGCACATCTCTGCTGAAGGGATCTATGATGATACAGAAGGAAGCCTGTGCATGGTAGGATGCCGCAATCTTGGCTCAAACAGTCAGCAGGCAACAAATGATTCAATAGATTGTGAGATTCTTGTCAATTTTCAGTTCCCACCAACAAATGCAAAGGATTCACATCATATCAAAGGAAGCATTGAAAGCACACGAAAGAAATCTGATCCTCTTCATTTTGAACGCTTGGATTTGTCTACAGCTTCCAAGGCTGTAGGAAAGCGATCTATTTGGAGGATGGATGGGAAGATTACCTTGGTTCTTATATCCACCACACTTGTATGTGTTTTTGCTGCATTACAACTCTTCCATGTAAAAAGAAATCCTGAAGCCATTCCCTCTATCTCCATCTTAATGCATCTAATGCTAACCCTTGGCTACATGATACCTCTGGGGATAAATTTTCGAGCCATGTTCACGCATGATATAAACAGCCAAAATGTGTACCTTGGAGGCGGTGGATGGCTTGAATGTAATGAGATAATCATAAGAATAACAACATTGGTAGCTTTCTTGATACAATTCCACCTTCTGAAGCTAACTTGGTCAGCAAAATCAGGAAATAGAACCCGAAAGGATCTCCAGGTCATGGAAAAGAAGGCTCTGTTTGTGGCTTTACGAGTGTATGCCATAGGGGCTTTAGCAGCTTTGTTTCTGCATACGCAGAACCTGAGGAAGAGGGACAATGGCAATGTCTTGCATTATGTAGAGTATTCCATCTTGGATGCCTTGATATCTTATGGTGGTCTGGTCTTGGGTGGTTTTTTGTTCCCTCAAATTCTGCTCAACATGTTCTGCAAATCAAGAGAAAATGCTCTATCAGTCTGGTTCTACTTCGGAACAACTTTTGTTCAAGCGCTGCCACATGCATATGACCTTTTCAGGGCTCACAGCTATGTTGGTGACCATTTGGACAAGTACTCTCACATTGATCCAAGTCGTGCGGCAGATTATTTTCACTCCACAGCTTGGAATGCCACTGCAAGCAGCGGAAGTCTACTGTTTGCTGGTATCATTTACTTACAGCAGCAGTTTGGGGGTCGTTGCATTTCTCCTCGAAAGTTGCAAGAGTTGGGTGCATATGAGAATGTCCCTACAGTTCATGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04120 map04120
Pfam Domains
Protein Families
DUF2921

Protein Analysis

846

Amino Acids

94.35

Weight (kDa)

6.87

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2921_N PF25333 39 - 204 2.8e-17 DUF2921 lipocalin-like domain
DUF2921_N PF25333 294 - 331 3.4e-07 DUF2921 lipocalin-like domain
DUF2921_N PF25333 363 - 540 4.9e-35 DUF2921 lipocalin-like domain
DUF2921 PF11145 550 - 830 2.7e-55 Transmembrane E3 ligase/DUF2921 transmembrane domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000420)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G21700
fragaria_vesca FvH4_1g10360 FvH4_1g10760 FvH4_2g30370 FvH4_3g09240 FvH4_3g20050 FvH4_3g20280 FvH4_3g20290 FvH4_3g20291 FvH4_3g20340 FvH4_3g20350 FvH4_3g20351 FvH4_3g20380 FvH4_3g20390 FvH4_5g13190 FvH4_6g20070 FvH4_6g42890
malus_domestica MD03G1227000.v1.1 MD10G1294900.v1.1 MD11G1246300.v1.1 MD11G1246400.v1.1 MD11G1246500.v1.1 MD11G1246600.v1.1
prunus_persica Prupe.4G047300_v2.0.a1 Prupe.4G181700_v2.0.a1 Prupe.4G181900_v2.0.a1 Prupe.4G182000_v2.0.a1 Prupe.4G182200_v2.0.a1
pyrus_communis pycom03g17470 pycom10g24670 pycom11g21640
rosa_chinensis RchiOBHm_Chr5g0008381 RchiOBHm_Chr5g0008391 RchiOBHm_Chr5g0033881 RchiOBHm_Chr5g0034171 RchiOBHm_Chr5g0034181 RchiOBHm_Chr5g0034191 RchiOBHm_Chr5g0034201 RchiOBHm_Chr5g0034211 RchiOBHm_Chr5g0034221 RchiOBHm_Chr5g0034231 RchiOBHm_Chr5g0034271 RchiOBHm_Chr5g0034281
rosa_laevigata RLG00000031566 RLG00000031567 RLG00000033506 RLG00000033529 RLG00000033530 RLG00000033531
rosa_multiflora Rmu_co8445509.1_g000001 Rmu_co8470615.1_g000001 Rmu_sc0008805.1_g000003 Rmu_sc0008805.1_g000004 Rmu_ssc0000128.1_g000029 Rmu_ssc0000128.1_g000031 Rmu_ssc0000128.1_g000032 Rmu_ssc0000388.1_g000062 Rmu_ssc0000388.1_g000063
rosa_roxburghii Rroxscaffold_1G00046010 Rroxscaffold_1G00046020 Rroxscaffold_1G00046030 Rroxscaffold_1G00046040 Rroxscaffold_1G00046060 Rroxscaffold_1G00046070 Rroxscaffold_1G00046080 Rroxscaffold_1G00046090
rosa_rugosa Rorug04G0435500 Rorug05G0142900 Rorug05G0144600 Rorug05G0144600 Rorug05G0144700 Rorug05G0144800
rosa_samantha Rh5AG233800 Rh5AG235900 Rh5AG236000 Rh5AG236100 Rh5AG236200 Rh5AG236300 Rh5AG236500 Rh5BG061200 Rh5BG061300 Rh5BG234300 Rh5BG236600 Rh5BG236800 Rh5CG071200 Rh5DG060000 Rh5DG060100 Rh5DG241300 Rh5DG243700 Rh5DG244000 Rh5DG244100
rosa_wichuraiana Rw3G018950 Rw5G005680 Rw5G021330 Rw5G021340 Rw5G021350 Rw5G021550

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 2017, 2397
AccI GTMKAC 3 cut(s) 1055, 1625, 2425
AciI CCGC 4 cut(s) 1453, 1884, 2372, 2418
AclWI GGATC 6 cut(s) 469, 581, 1418, 1589, 2013, 2354
AcsI RAATTY 6 cut(s) 108, 265, 523, 1171, 1828, 2205
AcuI CTGAAG 6 cut(s) 81, 117, 1197, 1425, 1776, 1982
AfaI GTAC 9 cut(s) 183, 309, 512, 644, 750, 922, 1192, 1874, 2348
AfeI AGCGCT 1 cut(s) 2286
AfiI CCNNNNNNNGG 7 cut(s) 286, 905, 1364, 1441, 2017, 2311, 2397
AflII CTTAAG 1 cut(s) 503
AflIII ACRYGT 1 cut(s) 2217
AhlI ACTAGT 1 cut(s) 530
AjnI CCWGG 3 cut(s) 394, 1036, 2010
AjuI GAANNNNNNNTTGG 4 cut(s) 1170, 1202, 1667, 1699
Alw21I GWGCWC 2 cut(s) 953, 1088
Alw26I GTCTC 1 cut(s) 658
AlwI GGATC 6 cut(s) 469, 581, 1418, 1589, 2013, 2354
AlwNI CAGNNNCTG 1 cut(s) 2098
Ama87I CYCGRG 2 cut(s) 834, 1087
Aor51HI AGCGCT 1 cut(s) 2286
AoxI GGCC 3 cut(s) 830, 1039, 1113
ApeKI GCWGC 9 cut(s) 367, 927, 1100, 1308, 1721, 2072, 2287, 2415, 2455
ApoI RAATTY 6 cut(s) 108, 265, 523, 1171, 1828, 2205
Asp700I GAANNNNTTC 2 cut(s) 38, 1761
AspLEI GCGC 1 cut(s) 2287
AspS9I GGNCC 1 cut(s) 602
AsuHPI GGTGA 1 cut(s) 2342
AvaI CYCGRG 2 cut(s) 834, 1087
AvaII GGWCC 1 cut(s) 602
AxyI CCTNAGG 1 cut(s) 2099
BanII GRGCYC 1 cut(s) 2317
BarI GAAGNNNNNNTAC 2 cut(s) 679, 711
Bbv12I GWGCWC 2 cut(s) 953, 1088
BbvI GCAGC 9 cut(s) 379, 939, 1087, 1320, 1708, 2084, 2274, 2427, 2467
BccI CCATC 6 cut(s) 1350, 1660, 1664, 1784, 1884, 2153
BciT130I CCWGG 3 cut(s) 396, 1038, 2012
BclI TGATCA 1 cut(s) 253
BcoDI GTCTC 1 cut(s) 658
BcuI ACTAGT 1 cut(s) 530
BfaI CTAG 2 cut(s) 531, 666
BfmI CTRYAG 5 cut(s) 1012, 1303, 1626, 1641, 2523
BfoI RGCGCY 1 cut(s) 2288
BfrI CTTAAG 1 cut(s) 503
BglI GCCNNNNNGGC 1 cut(s) 2063
BmcAI AGTACT 1 cut(s) 2348
Bme1390I CCNGG 3 cut(s) 396, 1038, 2012
Bme18I GGWCC 1 cut(s) 602
BmeT110I CYCGRG 2 cut(s) 834, 1087
BmgT120I GGNCC 1 cut(s) 602
BmiI GGNNCC 4 cut(s) 400, 556, 603, 1281
BmrFI CCNGG 3 cut(s) 396, 1038, 2012
BmsI GCATC 4 cut(s) 72, 1439, 1795, 2143
BplI GAGNNNNNCTC 2 cut(s) 1070, 1102
BpmI CTGGAG 1 cut(s) 1994
BpuEI CTTGAG 2 cut(s) 359, 910
BsaBI GATNNNNATC 2 cut(s) 466, 1551
BsaI GGTCTC 1 cut(s) 658
BsaJI CCNNGG 5 cut(s) 833, 1635, 1683, 1801, 1876
BsaXI ACNNNNNCTCC 2 cut(s) 1295, 1325
Bsc4I CCNNNNNNNGG 7 cut(s) 286, 905, 1364, 1441, 2017, 2311, 2397
Bse1I ACTGG 3 cut(s) 217, 380, 999
Bse21I CCTNAGG 1 cut(s) 2099
Bse3DI GCAATG 2 cut(s) 1204, 2125
Bse8I GATNNNNATC 2 cut(s) 466, 1551
BseBI CCWGG 3 cut(s) 396, 1038, 2012
BseDI CCNNGG 5 cut(s) 833, 1635, 1683, 1801, 1876
BseGI GGATG 6 cut(s) 467, 1454, 1671, 1675, 1895, 2158
BseJI GATNNNNATC 2 cut(s) 466, 1551
BseLI CCNNNNNNNGG 7 cut(s) 286, 905, 1364, 1441, 2017, 2311, 2397
BseMI GCAATG 2 cut(s) 1204, 2125
BseMII CTCAG 4 cut(s) 135, 492, 570, 2090
BseNI ACTGG 3 cut(s) 217, 380, 999
BseRI GAGGAG 2 cut(s) 1272, 2472
BseXI GCAGC 9 cut(s) 379, 939, 1087, 1320, 1708, 2084, 2274, 2427, 2467
BseYI CCCAGC 1 cut(s) 285
BsgI GTGCAG 1 cut(s) 790
BshFI GGCC 3 cut(s) 832, 1041, 1115
BsiHKAI GWGCWC 2 cut(s) 953, 1088
BsiHKCI CYCGRG 2 cut(s) 834, 1087
BslFI GGGAC 5 cut(s) 302, 615, 922, 2123, 2504
BslI CCNNNNNNNGG 7 cut(s) 286, 905, 1364, 1441, 2017, 2311, 2397
BsmAI GTCTC 1 cut(s) 658
BsmFI GGGAC 5 cut(s) 302, 615, 922, 2123, 2504
BsmI GAATGC 1 cut(s) 2407
BsnI GGCC 3 cut(s) 832, 1041, 1115
Bso31I GGTCTC 1 cut(s) 658
BsoBI CYCGRG 2 cut(s) 834, 1087
Bsp1286I GDGCHC 3 cut(s) 953, 1088, 2317
Bsp1407I TGTACA 2 cut(s) 307, 510
BspACI CCGC 4 cut(s) 1453, 1884, 2372, 2418
BspANI GGCC 3 cut(s) 832, 1041, 1115
BspCNI CTCAG 4 cut(s) 136, 491, 571, 2091
BspHI TCATGA 4 cut(s) 519, 570, 757, 2530
BspLI GGNNCC 4 cut(s) 400, 556, 603, 1281
BspPI GGATC 6 cut(s) 469, 581, 1418, 1589, 2013, 2354
BspTI CTTAAG 1 cut(s) 503
BspTNI GGTCTC 1 cut(s) 658
BsrDI GCAATG 2 cut(s) 1204, 2125
BsrGI TGTACA 2 cut(s) 307, 510
BsrI ACTGG 3 cut(s) 217, 380, 999
BssECI CCNNGG 5 cut(s) 833, 1635, 1683, 1801, 1876
BssNAI GTATAC 1 cut(s) 1056
BssT1I CCWWGG 4 cut(s) 1635, 1683, 1801, 1876
Bst1107I GTATAC 1 cut(s) 1056
Bst2UI CCWGG 3 cut(s) 396, 1038, 2012
Bst4CI ACNGT 9 cut(s) 674, 788, 961, 1013, 1252, 1374, 1472, 2430, 2527
Bst6I CTCTTC 4 cut(s) 1605, 1739, 2099, 2529
BstAFI CTTAAG 1 cut(s) 503
BstAPI GCANNNNNTGC 2 cut(s) 376, 1792
BstAUI TGTACA 2 cut(s) 307, 510
BstC8I GCNNGC 6 cut(s) 377, 1117, 1143, 1164, 1479, 2413
BstDEI CTNAG 5 cut(s) 144, 478, 579, 1286, 2099
BstEII GGTNACC 1 cut(s) 2330
BstENI CCTNNNNNAGG 1 cut(s) 903
BstF5I GGATG 6 cut(s) 467, 1454, 1671, 1675, 1895, 2158
BstH2I RGCGCY 1 cut(s) 2288
BstHHI GCGC 1 cut(s) 2287
BstMAI GTCTC 1 cut(s) 658
BstNI CCWGG 3 cut(s) 396, 1038, 2012
BstNSI RCATGY 5 cut(s) 569, 1145, 1166, 2221, 2297
BstPI GGTNACC 1 cut(s) 2330
BstSCI CCNGG 3 cut(s) 394, 1036, 2010
BstSFI CTRYAG 5 cut(s) 1012, 1303, 1626, 1641, 2523
BstV1I GCAGC 9 cut(s) 379, 939, 1087, 1320, 1708, 2084, 2274, 2427, 2467
BstX2I RGATCY 2 cut(s) 1410, 2005
BstXI CCANNNNNNTGG 1 cut(s) 598
BstYI RGATCY 2 cut(s) 1410, 2005
BstZ17I GTATAC 1 cut(s) 1056
Bsu36I CCTNAGG 1 cut(s) 2099
BsuRI GGCC 3 cut(s) 832, 1041, 1115
BtsCI GGATG 6 cut(s) 467, 1454, 1671, 1675, 1895, 2158
BtsI GCAGTG 2 cut(s) 229, 2406
BtsIMutI CAGTG 6 cut(s) 210, 229, 750, 784, 1006, 2406
Cac8I GCNNGC 6 cut(s) 377, 1117, 1143, 1164, 1479, 2413
CaiI CAGNNNCTG 1 cut(s) 2098
CciI TCATGA 4 cut(s) 519, 570, 757, 2530
CfoI GCGC 1 cut(s) 2287
Cfr13I GGNCC 1 cut(s) 602
Csp6I GTAC 9 cut(s) 182, 308, 511, 643, 749, 921, 1191, 1873, 2347
CspCI CAANNNNNGTGG 2 cut(s) 1687, 1722
CviQI GTAC 9 cut(s) 182, 308, 511, 643, 749, 921, 1191, 1873, 2347
DdeI CTNAG 5 cut(s) 144, 478, 579, 1286, 2099
Eam1104I CTCTTC 4 cut(s) 1605, 1739, 2099, 2529
EarI CTCTTC 4 cut(s) 1605, 1739, 2099, 2529
Eco130I CCWWGG 4 cut(s) 1635, 1683, 1801, 1876
Eco24I GRGCYC 1 cut(s) 2317
Eco31I GGTCTC 1 cut(s) 658
Eco32I GATATC 1 cut(s) 2163
Eco47I GGWCC 1 cut(s) 602
Eco47III AGCGCT 1 cut(s) 2286
Eco57I CTGAAG 6 cut(s) 81, 117, 1197, 1425, 1776, 1982
Eco81I CCTNAGG 1 cut(s) 2099
Eco88I CYCGRG 2 cut(s) 834, 1087
Eco91I GGTNACC 1 cut(s) 2330
EcoNI CCTNNNNNAGG 1 cut(s) 903
EcoO65I GGTNACC 1 cut(s) 2330
EcoRI GAATTC 1 cut(s) 523
EcoRII CCWGG 3 cut(s) 394, 1036, 2010
EcoRV GATATC 1 cut(s) 2163
EcoT14I CCWWGG 4 cut(s) 1635, 1683, 1801, 1876
EcoT22I ATGCAT 3 cut(s) 1164, 1788, 2299
EcoT38I GRGCYC 1 cut(s) 2317
ErhI CCWWGG 4 cut(s) 1635, 1683, 1801, 1876
FalI AAGNNNNNCTT 6 cut(s) 321, 353, 477, 509, 1667, 1699
FaqI GGGAC 5 cut(s) 302, 615, 922, 2123, 2504
FauNDI CATATG 2 cut(s) 2299, 2509
FbaI TGATCA 1 cut(s) 253
FblI GTMKAC 3 cut(s) 1055, 1625, 2425
FokI GGATG 6 cut(s) 454, 1461, 1678, 1682, 1902, 2165
FriOI GRGCYC 1 cut(s) 2317
FspBI CTAG 2 cut(s) 531, 666
GlaI GCGC 1 cut(s) 2286
GsaI CCCAGC 1 cut(s) 289
GsuI CTGGAG 1 cut(s) 1994
HaeII RGCGCY 1 cut(s) 2288
HaeIII GGCC 3 cut(s) 832, 1041, 1115
HhaI GCGC 1 cut(s) 2287
Hin6I GCGC 1 cut(s) 2285
HinP1I GCGC 1 cut(s) 2285
HincII GTYRAC 1 cut(s) 150
HindII GTYRAC 1 cut(s) 150
HindIII AAGCTT 2 cut(s) 35, 446
HinfI GANTC 7 cut(s) 146, 190, 423, 434, 1490, 1507, 1547
HphI GGTGA 1 cut(s) 2342
Hpy166II GTNNAC 9 cut(s) 150, 491, 645, 731, 1056, 1626, 1845, 1873, 2426
Hpy188I TCNGA 9 cut(s) 189, 433, 461, 826, 868, 1177, 1594, 1962, 2267
Hpy8I GTNNAC 9 cut(s) 150, 491, 645, 731, 1056, 1626, 1845, 1873, 2426
HpyCH4III ACNGT 9 cut(s) 674, 788, 961, 1013, 1252, 1374, 1472, 2430, 2527
HpyF3I CTNAG 5 cut(s) 144, 478, 579, 1286, 2099
HspAI GCGC 1 cut(s) 2285
Ksp22I TGATCA 1 cut(s) 253
LmnI GCTCC 3 cut(s) 948, 1285, 1316
Lsp1109I GCAGC 9 cut(s) 379, 939, 1087, 1320, 1708, 2084, 2274, 2427, 2467
LweI GCATC 4 cut(s) 72, 1439, 1795, 2143
MaeI CTAG 2 cut(s) 531, 666
MaeIII GTNAC 9 cut(s) 200, 224, 349, 535, 668, 961, 1072, 1289, 2330
MboII GAAGA 8 cut(s) 43, 429, 704, 891, 1592, 1687, 1726, 2116
MfeI CAATTG 1 cut(s) 912
MflI RGATCY 2 cut(s) 1410, 2005
MhlI GDGCHC 3 cut(s) 953, 1088, 2317
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 439
Mph1103I ATGCAT 3 cut(s) 1164, 1788, 2299
MroXI GAANNNNTTC 2 cut(s) 38, 1761
MseI TTAA 3 cut(s) 234, 504, 1781
MslI CAYNNNNRTG 5 cut(s) 360, 1708, 1781, 2298, 2322
MspA1I CMGCKG 2 cut(s) 101, 2418
MspCI CTTAAG 1 cut(s) 503
MspR9I CCNGG 3 cut(s) 396, 1038, 2012
MunI CAATTG 1 cut(s) 912
Mva1269I GAATGC 1 cut(s) 2407
MvaI CCWGG 3 cut(s) 396, 1038, 2012
NdeI CATATG 2 cut(s) 2299, 2509
NlaIV GGNNCC 4 cut(s) 400, 556, 603, 1281
NmuCI GTSAC 4 cut(s) 224, 961, 1289, 2330
NsiI ATGCAT 3 cut(s) 1164, 1788, 2299
NspI RCATGY 5 cut(s) 569, 1145, 1166, 2221, 2297
PaeI GCATGC 2 cut(s) 1145, 1166
PaeR7I CTCGAG 1 cut(s) 1087
PagI TCATGA 4 cut(s) 519, 570, 757, 2530
PciI ACATGT 1 cut(s) 2217
PctI GAATGC 1 cut(s) 2407
PdmI GAANNNNTTC 2 cut(s) 38, 1761
PfeI GAWTC 6 cut(s) 190, 423, 434, 1490, 1507, 1547
PflMI CCANNNNNTGG 2 cut(s) 2017, 2397
PleI GAGTC 1 cut(s) 154
PpsI GAGTC 1 cut(s) 154
PscI ACATGT 1 cut(s) 2217
Psp6I CCWGG 3 cut(s) 394, 1036, 2010
PspEI GGTNACC 1 cut(s) 2330
PspFI CCCAGC 1 cut(s) 285
PspGI CCWGG 3 cut(s) 394, 1036, 2010
PspN4I GGNNCC 4 cut(s) 400, 556, 603, 1281
PspPI GGNCC 1 cut(s) 602
PsrI GAACNNNNNNTAC 2 cut(s) 626, 658
PstNI CAGNNNCTG 1 cut(s) 2098
PsuI RGATCY 2 cut(s) 1410, 2005
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 9 cut(s) 183, 309, 512, 644, 750, 922, 1192, 1874, 2348
RsaNI GTAC 9 cut(s) 182, 308, 511, 643, 749, 921, 1191, 1873, 2347
RseI CAYNNNNRTG 5 cut(s) 360, 1708, 1781, 2298, 2322
SaqAI TTAA 3 cut(s) 234, 504, 1781
Sau96I GGNCC 1 cut(s) 602
ScaI AGTACT 1 cut(s) 2348
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 3 cut(s) 396, 1038, 2012
SduI GDGCHC 3 cut(s) 953, 1088, 2317
SfaNI GCATC 4 cut(s) 72, 1439, 1795, 2143
SfcI CTRYAG 5 cut(s) 1012, 1303, 1626, 1641, 2523
Sfr274I CTCGAG 1 cut(s) 1087
SinI GGWCC 1 cut(s) 602
SlaI CTCGAG 1 cut(s) 1087
SmiMI CAYNNNNRTG 5 cut(s) 360, 1708, 1781, 2298, 2322
SmlI CTYRAG 4 cut(s) 338, 503, 889, 1087
SmoI CTYRAG 4 cut(s) 338, 503, 889, 1087
SpeI ACTAGT 1 cut(s) 530
SphI GCATGC 2 cut(s) 1145, 1166
SsiI CCGC 4 cut(s) 1453, 1884, 2372, 2418
SspI AATATT 2 cut(s) 776, 1321
SspMI CTAG 2 cut(s) 531, 666
StyD4I CCNGG 3 cut(s) 394, 1036, 2010
StyI CCWWGG 4 cut(s) 1635, 1683, 1801, 1876
TaaI ACNGT 9 cut(s) 674, 788, 961, 1013, 1252, 1374, 1472, 2430, 2527
TaqI TCGA 5 cut(s) 80, 561, 1088, 1834, 2485
TaqII GACCGA 1 cut(s) 1253
TatI WGTACW 4 cut(s) 307, 510, 642, 2346
TauI GCSGC 2 cut(s) 1455, 2375
TfiI GAWTC 6 cut(s) 190, 423, 434, 1490, 1507, 1547
Tru1I TTAA 3 cut(s) 234, 504, 1781
Tru9I TTAA 3 cut(s) 234, 504, 1781
TscAI CASTG 6 cut(s) 217, 229, 750, 791, 1006, 2413
TseFI GTSAC 4 cut(s) 224, 961, 1289, 2330
TseI GCWGC 9 cut(s) 367, 927, 1100, 1308, 1721, 2072, 2287, 2415, 2455
Tsp45I GTSAC 4 cut(s) 224, 961, 1289, 2330
TspDTI ATGAA 8 cut(s) 31, 47, 536, 647, 1144, 1401, 1592, 2519
TspGWI ACGGA 1 cut(s) 391
TspRI CASTG 6 cut(s) 217, 229, 750, 791, 1006, 2413
Van91I CCANNNNNTGG 2 cut(s) 2017, 2397
Vha464I CTTAAG 1 cut(s) 503
VpaK11BI GGWCC 1 cut(s) 602
XagI CCTNNNNNAGG 1 cut(s) 903
XapI RAATTY 6 cut(s) 108, 265, 523, 1171, 1828, 2205
XceI RCATGY 5 cut(s) 569, 1145, 1166, 2221, 2297
XcmI CCANNNNNNNNNTGG 1 cut(s) 931
XhoI CTCGAG 1 cut(s) 1087
XmiI GTMKAC 3 cut(s) 1055, 1625, 2425
XmnI GAANNNNTTC 2 cut(s) 38, 1761
XspI CTAG 2 cut(s) 531, 666
ZrmI AGTACT 1 cut(s) 2348
Zsp2I ATGCAT 3 cut(s) 1164, 1788, 2299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.